The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	310292	353163	2814270	plate,holin,terminase,head,integrase,protease,tail,portal,capsid	Staphylococcus_phage(85.94%)	64	310182:310199	355365:355382
310182:310199	attL	ATCATACAAGGATGGGAT	NA	NA	NA	NA
WP_112367435.1|310292_311498_-|integrase	site-specific integrase	integrase	A7YGM7	Staphylococcus_virus	98.8	1.0e-219
WP_000191466.1|311623_312238_+	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
WP_001013104.1|312234_312381_-	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000705240.1|312417_312600_-	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_000511090.1|312670_313402_-	helix-turn-helix transcriptional regulator	NA	S4SVC5	Staphylococcus_phage	99.2	1.3e-132
WP_000213811.1|313553_313766_+	helix-turn-helix transcriptional regulator	NA	A7TWF1	Staphylococcus_phage	100.0	1.6e-30
WP_000435357.1|313813_314257_+	hypothetical protein	NA	A7TWF2	Staphylococcus_phage	100.0	8.9e-76
WP_000362644.1|314461_314674_-	hypothetical protein	NA	D2JGJ1	Staphylococcus_phage	100.0	7.6e-33
WP_001148860.1|314743_314941_+	hypothetical protein	NA	A7TWF5	Staphylococcus_phage	100.0	4.6e-24
WP_000773059.1|314927_315308_-	DUF2513 domain-containing protein	NA	Q4ZCQ5	Staphylococcus_virus	100.0	5.8e-68
WP_001025401.1|315374_315620_+	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_001128433.1|315588_315954_-	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_001097552.1|316008_316224_+	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_001124160.1|316248_316512_+	helix-turn-helix domain-containing protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
WP_001285954.1|316524_316686_+	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
WP_000175000.1|316764_317088_+	hypothetical protein	NA	A0A2I6PDL5	Staphylococcus_phage	100.0	1.3e-52
WP_000985985.1|317102_317465_+	hypothetical protein	NA	Q4ZCP8	Staphylococcus_virus	99.2	1.4e-55
WP_000762532.1|317461_318628_+	DUF2800 domain-containing protein	NA	A0A2I6PDL4	Staphylococcus_phage	100.0	8.3e-222
WP_115288336.1|318653_319211_+	DUF2815 family protein	NA	A0A2K9VBT2	Staphylococcus_phage	99.5	2.0e-96
WP_115288463.1|319279_321232_+	DNA polymerase	NA	Q4ZCP5	Staphylococcus_virus	98.9	0.0e+00
WP_001164629.1|321244_321430_+	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
WP_000113974.1|321429_321831_+	PVL family protein	NA	A0A2I6PEL5	Staphylococcus_phage	100.0	1.2e-68
WP_000022738.1|321830_322085_+	DUF3310 domain-containing protein	NA	Q6R831	Staphylococcus_virus	97.6	8.2e-42
WP_000178883.1|322084_322333_+	hypothetical protein	NA	A0A2I6PF06	Staphylococcus_phage	100.0	3.6e-42
WP_001566727.1|322504_322657_+	DUF1024 family protein	NA	Q9G015	Staphylococcus_virus	100.0	3.3e-22
WP_001566726.1|322653_322938_+	hypothetical protein	NA	Q9G014	Staphylococcus_virus	98.9	8.0e-46
WP_115288337.1|322930_323185_+	DUF1024 family protein	NA	A7TWH5	Staphylococcus_phage	91.7	1.4e-36
WP_072433467.1|323147_323342_+	hypothetical protein	NA	M1SVE4	Staphylococcus_phage	93.4	1.3e-23
WP_031927912.1|323334_323862_+	dUTP pyrophosphatase	NA	A0A2I6PE85	Staphylococcus_phage	99.4	3.0e-94
WP_031823832.1|323898_324105_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	77.9	8.4e-21
WP_031870647.1|324101_324296_+	hypothetical protein	NA	S4SX95	Staphylococcus_phage	95.3	1.9e-27
WP_001072795.1|324292_324496_+	hypothetical protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
WP_000608278.1|324488_324725_+	hypothetical protein	NA	Q4ZDP0	Staphylococcus_virus	100.0	2.8e-36
WP_001799187.1|324708_325104_+	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	100.0	3.3e-66
WP_000595260.1|325100_325253_+	transcriptional activator RinB	NA	A7TWI2	Staphylococcus_phage	100.0	2.6e-19
WP_000265258.1|325320_325521_+	DUF1514 family protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
WP_000884844.1|325572_328020_+	hypothetical protein	NA	R4WAL1	Staphylococcus_phage	100.0	0.0e+00
WP_078092494.1|328128_328227_-	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	96.9	1.1e-10
WP_000665203.1|328360_328651_+	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
WP_000513699.1|330007_330445_+	transcriptional regulator	NA	A0A2I6PDC2	Staphylococcus_phage	100.0	4.6e-77
WP_000160689.1|330601_330916_+	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
WP_000778932.1|331044_331350_+|terminase	terminase	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
WP_000153555.1|331339_333031_+|terminase	terminase large subunit	terminase	A0A2I6PE44	Staphylococcus_phage	100.0	0.0e+00
WP_001100671.1|333035_334274_+|portal	phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	99.8	2.6e-234
WP_000061866.1|334257_335031_+|protease	Clp protease ClpP	protease	A0A2I6PEQ7	Staphylococcus_phage	100.0	2.4e-137
WP_001142733.1|335042_336206_+|capsid	phage major capsid protein	capsid	A0A2I6PE62	Staphylococcus_phage	99.7	6.1e-217
WP_000050975.1|336274_336553_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PE36	Staphylococcus_phage	100.0	2.1e-46
WP_000395501.1|336564_336897_+	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
WP_000110020.1|336893_337295_+	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_001023802.1|337295_337691_+	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000807539.1|337725_338367_+|tail	tail protein	tail	A0A2I6PE59	Staphylococcus_phage	99.5	2.2e-120
WP_000169131.1|338458_338914_+	Ig domain-containing protein	NA	Q9B0D4	Staphylococcus_phage	100.0	2.8e-77
WP_000589165.1|338971_339322_+	hypothetical protein	NA	A0A2I6PDE6	Staphylococcus_phage	100.0	1.1e-55
WP_000438833.1|339363_339522_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_115288338.1|339535_345736_+|tail	phage tail tape measure protein	tail	A0A2I6PF36	Staphylococcus_phage	98.8	0.0e+00
WP_115288339.1|345735_346560_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	99.6	3.5e-158
WP_000384474.1|346568_348152_+	peptidase	NA	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
WP_000179860.1|348151_348442_+	hypothetical protein	NA	A0A2I6PF46	Staphylococcus_phage	100.0	2.1e-49
WP_031887117.1|348457_350368_+	hypothetical protein	NA	U5U4Q1	Staphylococcus_phage	99.8	0.0e+00
WP_000067140.1|350367_351834_+|plate	BppU family phage baseplate upper protein	plate	A7TWK6	Staphylococcus_phage	100.0	7.6e-257
WP_001166599.1|351833_352223_+	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000916020.1|352215_352380_+	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_000466784.1|352425_352725_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000339144.1|352860_353163_+|holin	phage holin	holin	B7T0L0	Staphylococcus_virus	100.0	4.1e-48
355365:355382	attR	ATCATACAAGGATGGGAT	NA	NA	NA	NA
>prophage 2
NZ_CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	745639	753459	2814270		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|745639_746695_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_115288360.1|746694_747381_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037811.1|747355_747829_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093557.1|748170_748611_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637683.1|748890_749475_-	hypothetical protein	NA	NA	NA	NA	NA
WP_115288361.1|749573_750287_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941334.1|750290_750710_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446721.1|750711_751380_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.1	9.6e-66
WP_000604509.1|751730_752324_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	44.0	1.5e-38
WP_001217797.1|752307_753459_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
>prophage 3
NZ_CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	765431	779624	2814270		uncultured_Caudovirales_phage(50.0%)	13	NA	NA
WP_000663031.1|765431_766490_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.4	2.3e-21
WP_000197262.1|766647_767190_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429016.1|767795_768713_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.4	2.1e-07
WP_000193751.1|768994_770500_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930020.1|770839_771340_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	70.8	2.2e-51
WP_001068497.1|771359_772226_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692523.1|773026_773425_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.7	4.3e-53
WP_000855505.1|773387_775493_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|775610_776582_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499194.1|776757_776913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047213721.1|776951_777920_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	79.1	8.0e-138
WP_001245577.1|777909_778866_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616870.1|778862_779624_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	5.0e-18
>prophage 4
NZ_CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	1027911	1036384	2814270		Synechococcus_phage(33.33%)	9	NA	NA
WP_001807178.1|1027911_1028394_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	43.3	3.4e-20
WP_115288375.1|1028380_1029505_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174052.1|1029508_1030213_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	2.8e-47
WP_000848351.1|1030212_1030476_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|1030477_1031149_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032747.1|1031141_1033331_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.8e-140
WP_000483713.1|1033309_1034794_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000030808.1|1034786_1035815_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	3.8e-61
WP_031927753.1|1035817_1036384_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	8.0e-29
>prophage 5
NZ_CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	1275989	1329302	2814270	tRNA,terminase,head,transposase,protease,tail,portal,capsid	Bacillus_phage(27.59%)	56	NA	NA
WP_001001521.1|1275989_1277534_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_000282386.1|1277534_1277900_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000842277.1|1277926_1278418_+	energy coupling factor transporter S component ThiW	NA	NA	NA	NA	NA
WP_000073332.1|1278720_1281339_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.7	5.0e-41
WP_000516257.1|1281351_1283361_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	29.5	5.3e-59
WP_001077635.1|1283366_1283909_+	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_001103747.1|1284383_1285202_+	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	3.1e-26
WP_000417379.1|1285330_1286827_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_001218598.1|1286984_1288658_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_000136955.1|1288807_1289722_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001798536.1|1289739_1290675_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_000561359.1|1290689_1290923_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_001807150.1|1291185_1292505_-|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_000448078.1|1292665_1293142_-	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	1.2e-22
WP_031927515.1|1293253_1294492_+	GTPase HflX	NA	NA	NA	NA	NA
WP_000652044.1|1294510_1295749_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000624945.1|1295991_1296360_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001126603.1|1296378_1297719_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_115288387.1|1299037_1299733_-	hypothetical protein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	34.5	3.4e-05
WP_000554410.1|1299744_1300128_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001807150.1|1300323_1301643_+|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_000664916.1|1301799_1302192_-	helix-turn-helix domain-containing protein	NA	A0A2I6PE55	Staphylococcus_phage	53.6	2.7e-28
WP_001209962.1|1302359_1302578_+	DUF739 family protein	NA	A0A2I6PE94	Staphylococcus_phage	62.5	4.9e-19
WP_000932237.1|1302604_1302880_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000800340.1|1303303_1303510_-	hypothetical protein	NA	A1BTY8	Staphylococcus_virus	75.0	4.3e-25
WP_001157026.1|1303569_1304253_+	phage repressor protein	NA	A9CR56	Staphylococcus_phage	86.0	8.0e-108
WP_000072840.1|1304351_1304513_+	DUF1270 family protein	NA	R4IH12	Staphylococcus_phage	69.8	1.1e-12
WP_031927615.1|1304600_1304918_+	DUF2482 family protein	NA	W5RAK4	Staphylococcus_phage	74.5	9.0e-30
WP_000786635.1|1304907_1305174_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	53.6	3.9e-18
WP_001002734.1|1305178_1306429_+	helicase SNF2	NA	A0A1B1P7L4	Bacillus_phage	57.8	1.8e-134
WP_025174483.1|1306419_1306737_+	hypothetical protein	NA	A0A2P0ZLA7	Lactobacillus_phage	43.2	7.1e-19
WP_000160835.1|1306729_1307035_+	hypothetical protein	NA	A0A1B1P7M6	Bacillus_phage	59.3	5.8e-26
WP_031927619.1|1307024_1308851_+	AAA family ATPase	NA	A0A1B1P7N0	Bacillus_phage	56.3	2.6e-166
WP_001250666.1|1308868_1309075_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000140895.1|1309120_1309603_+	DUF669 domain-containing protein	NA	A0A2H4J1S8	uncultured_Caudovirales_phage	37.3	2.9e-19
WP_000560476.1|1309884_1311603_+	hypothetical protein	NA	A0A1B1P7M5	Bacillus_phage	63.6	1.9e-211
WP_000394569.1|1311706_1312096_+	hypothetical protein	NA	U3PG42	Staphylococcus_phage	51.9	4.5e-07
WP_000792984.1|1312171_1312477_+	hypothetical protein	NA	A0A2H4JF73	uncultured_Caudovirales_phage	73.7	6.2e-36
WP_000231299.1|1312499_1312970_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000584491.1|1313390_1313582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_115288388.1|1313613_1315419_+	DNA primase	NA	A0A1B1P7L5	Bacillus_phage	58.8	1.6e-208
WP_000933402.1|1315792_1316284_+	hypothetical protein	NA	S5MAA9	Brevibacillus_phage	30.0	7.4e-07
WP_000870118.1|1316716_1317007_+	HNH endonuclease	NA	D2XR61	Bacillus_phage	43.2	1.3e-19
WP_000868798.1|1317325_1317658_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046463075.1|1317641_1319285_+|terminase	terminase large subunit	terminase	A0A0U4B089	Bacillus_phage	57.3	8.4e-180
WP_000523761.1|1319300_1320437_+|portal	phage portal protein	portal	A0A2H4JBZ5	uncultured_Caudovirales_phage	41.4	7.8e-84
WP_115288389.1|1320436_1321123_+|protease	Clp protease ClpP	protease	A0A2H4J8Y7	uncultured_Caudovirales_phage	49.5	4.0e-43
WP_115288390.1|1321149_1322319_+|capsid	phage major capsid protein	capsid	A0A0U4JIF4	Bacillus_phage	50.3	1.3e-97
WP_000406284.1|1322340_1322646_+	hypothetical protein	NA	A0A059T7R0	Listeria_phage	44.8	6.0e-15
WP_000744618.1|1322620_1322965_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_000114215.1|1322948_1323287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072314.1|1323286_1323724_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000213868.1|1323729_1324413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000021684.1|1324440_1324791_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000159313.1|1324838_1325063_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031927625.1|1325120_1329302_+|tail	phage tail tape measure protein	tail	Q9T0X1	Lactobacillus_phage	42.6	3.2e-58
>prophage 6
NZ_CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	1333490	1339936	2814270	capsid,holin	Staphylococcus_phage(83.33%)	10	NA	NA
WP_000569801.1|1333490_1333901_+	hypothetical protein	NA	A0A1I9KKA6	Lactobacillus_phage	32.8	3.9e-09
WP_000665466.1|1333935_1334250_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047213423.1|1334233_1334617_+|holin	phage holin family protein	holin	H9A0W5	Staphylococcus_phage	39.2	4.3e-18
WP_031927627.1|1334681_1335602_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6JQL2	Staphylococcus_phage	50.2	1.2e-66
WP_115288391.1|1336078_1336276_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	50.0	9.9e-11
WP_001019311.1|1336469_1336973_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000459699.1|1336985_1337300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000907423.1|1337299_1337728_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000997672.1|1338131_1338341_+	helix-turn-helix domain-containing protein	NA	A0A1W6JNK0	Staphylococcus_phage	59.4	1.9e-12
WP_115288392.1|1338595_1339936_+|capsid	minor capsid protein	capsid	A0A1J0MFV1	Staphylococcus_phage	58.7	1.2e-139
>prophage 7
NZ_CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	1613790	1622102	2814270	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1613790_1614576_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924216.1|1614701_1615592_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062177.1|1615601_1616948_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000683926.1|1617061_1618162_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	30.6	2.3e-08
WP_000624574.1|1618164_1618842_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1618972_1620079_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217266.1|1620302_1622102_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	1.3e-53
>prophage 8
NZ_CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	1691574	1700617	2814270	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1691574_1692093_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_042908036.1|1692114_1694388_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_115288409.1|1694590_1696870_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1697144_1697405_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1697423_1698563_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019170.1|1698585_1699611_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005767.1|1699612_1700617_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 9
NZ_CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	1829451	1910486	2814270	tRNA,protease,transposase	Staphylococcus_phage(94.12%)	73	NA	NA
WP_115288412.1|1829451_1835991_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	92.1	8.9e-289
WP_000836469.1|1836316_1836628_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	96.1	4.5e-50
WP_162805395.1|1836649_1839064_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
WP_001025061.1|1839354_1840536_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_000526539.1|1840645_1841599_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|1841595_1842159_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1842278_1842680_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266089.1|1843251_1844079_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_072357767.1|1844081_1844201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196354.1|1844312_1845314_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008551.1|1845435_1845900_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_115288415.1|1845912_1847094_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
WP_000493884.1|1847104_1847737_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	1.4e-111
WP_000384178.1|1847743_1848775_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	6.9e-196
WP_001261666.1|1849267_1850770_-	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	8.6e-30
WP_000221188.1|1851290_1851605_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	97.1	2.8e-52
WP_111228746.1|1851604_1852897_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	97.4	3.4e-224
WP_000163240.1|1852914_1853310_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	99.2	2.4e-72
WP_047212960.1|1853713_1855033_-|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_001032833.1|1855179_1856034_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1856309_1856534_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671048.1|1856732_1857203_+	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	96.8	4.8e-80
WP_001153740.1|1857315_1857759_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030469.1|1857745_1858189_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001168909.1|1858486_1859122_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1859558_1860272_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091445.1|1860529_1860832_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200550.1|1861087_1861453_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	98.3	6.2e-59
WP_000623473.1|1861449_1861803_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	77.8	4.2e-20
WP_000453315.1|1862052_1862886_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.6	1.2e-158
WP_000366163.1|1863097_1864006_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933822.1|1864130_1865324_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000109907.1|1865695_1867288_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_072357842.1|1867582_1868329_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	97.6	1.3e-140
WP_000672018.1|1868333_1868807_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	97.5	1.0e-82
WP_000718107.1|1868872_1869130_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778513.1|1869126_1870128_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	8.2e-186
WP_000348367.1|1870132_1871611_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	96.7	6.9e-282
WP_072357839.1|1871769_1872225_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	1.4e-79
WP_072357764.1|1872527_1873178_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	67.6	9.5e-34
WP_000070657.1|1873259_1874255_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	96.8	2.9e-74
WP_047213559.1|1874329_1874956_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	92.4	2.8e-75
WP_000627546.1|1874996_1875338_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	3.0e-55
WP_000414223.1|1875438_1876011_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	7.1e-25
WP_000864137.1|1876208_1876766_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	96.2	2.0e-77
WP_000747794.1|1877393_1877837_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000742593.1|1878156_1878606_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_047213567.1|1879241_1880432_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	34.7	1.5e-45
WP_000028660.1|1880424_1881981_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.2	1.2e-287
WP_001038741.1|1882344_1883064_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	95.8	4.0e-126
WP_001038864.1|1883189_1883909_-|protease	serine protease	protease	A0A2H4PQP7	Staphylococcus_phage	92.9	2.4e-123
WP_001039451.1|1883966_1884689_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	95.8	8.1e-127
WP_001092761.1|1886475_1887054_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	74.0	1.5e-67
WP_025174462.1|1887527_1887746_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	83.3	4.1e-26
WP_000550245.1|1887999_1888473_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031927813.1|1888477_1889269_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000782462.1|1889637_1890621_-	beta-channel forming cytolysin	NA	A0A2H4PQH7	Staphylococcus_phage	98.8	3.4e-184
WP_000473594.1|1890622_1891558_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	99.7	5.1e-174
WP_000617702.1|1892521_1892758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_115288416.1|1892778_1893555_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_031927816.1|1894718_1895888_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031927817.1|1897172_1897949_-	staphylococcal enterotoxin type G	NA	NA	NA	NA	NA
WP_001236367.1|1898232_1898988_-	staphylococcal enterotoxin type N	NA	A0A075M4C7	Staphylococcus_phage	41.0	3.9e-39
WP_031927818.1|1899026_1899812_-	staphylococcal enterotoxin type C1/U	NA	A0A097PAT7	Streptococcus_pyogenes_phage	42.7	3.8e-45
WP_031927819.1|1899962_1900694_-	staphylococcal enterotoxin type I	NA	A0A1X9H080	Staphylococcus_phage	39.2	5.1e-28
WP_000821651.1|1900728_1901448_-	staphylococcal enterotoxin type M	NA	A0A1X9H080	Staphylococcus_phage	34.3	5.8e-24
WP_129754921.1|1901726_1902509_-	staphylococcal enterotoxin type O	NA	A0A1X9H080	Staphylococcus_phage	37.9	6.7e-34
WP_000132893.1|1903968_1904523_-	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_000167553.1|1904842_1906243_-	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_000162881.1|1906266_1907190_-	ferrochelatase	NA	NA	NA	NA	NA
WP_000233535.1|1907247_1908285_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_047213579.1|1908546_1909077_+	signal transduction protein TRAP	NA	NA	NA	NA	NA
WP_115288411.1|1909166_1910486_+|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP022682	Staphylococcus aureus strain 78 chromosome, complete genome	2814270	1985922	2085428	2814270	holin,tRNA,terminase,head,integrase,transposase,protease,tail,portal,capsid	Staphylococcus_phage(76.62%)	119	2020193:2020210	2085531:2085548
WP_001807150.1|1985922_1987242_-|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_115288418.1|1987439_1988867_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_000027928.1|1988879_1990337_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_000170162.1|1990338_1990641_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957020.1|1991006_1992545_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000238681.1|1992703_1993057_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_031927678.1|1993181_1994141_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_000831693.1|1994423_1995623_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774565.1|1995635_1997639_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	5.8e-114
WP_000992924.1|1997642_1999835_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272064.1|1999831_2000524_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|2000695_2000998_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572880.1|2001106_2002402_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827765.1|2003261_2004428_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434533.1|2004458_2004785_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669861.1|2005075_2005249_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011539.1|2005229_2005832_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040872.1|2006100_2006922_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	53.1	7.9e-70
WP_000284433.1|2006914_2008384_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	3.5e-108
WP_000897635.1|2008567_2009644_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177828.1|2009663_2010458_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|2010529_2010637_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323164.1|2010647_2012210_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275712.1|2012414_2013512_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	1.5e-47
WP_000149686.1|2013883_2014444_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|2014496_2015426_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001790680.1|2015618_2015792_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042908133.1|2015843_2017223_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_115288419.1|2017342_2018371_-	lactonase family protein	NA	NA	NA	NA	NA
WP_001284658.1|2018830_2019211_-	penicillinase repressor BlaI	NA	NA	NA	NA	NA
WP_001096367.1|2019200_2020958_-	beta-lactam sensor/signal transducer BlaR1	NA	NA	NA	NA	NA
2020193:2020210	attL	TTTTGTTAATATTATTAA	NA	NA	NA	NA
WP_000733622.1|2021064_2021910_+	penicillin-hydrolyzing class A beta-lactamase BlaZ	NA	A0A1B0VBP7	Salmonella_phage	33.9	4.4e-31
WP_000612779.1|2022223_2022634_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	53.5	3.1e-30
WP_000410574.1|2024051_2024417_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000026850.1|2024425_2026489_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_000706213.1|2026491_2027604_-|integrase	tyrosine-type recombinase/integrase	integrase	P97010	Streptococcus_pyogenes_phage	31.6	1.7e-11
WP_000267034.1|2028149_2028323_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188066.1|2028773_2029814_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713075.1|2029870_2030713_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033968.1|2030709_2031267_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|2031326_2031851_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|2031971_2032535_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221656.1|2032600_2033341_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_115288420.1|2033340_2034213_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_000645727.1|2034209_2034890_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991298.1|2034890_2035787_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000691584.1|2035783_2036164_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681972.1|2036421_2036598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|2036840_2036939_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068524.1|2037138_2038425_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000671713.1|2038695_2038986_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_115288421.1|2039000_2040437_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000669791.1|2041394_2041574_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	98.3	1.4e-24
WP_001791826.1|2041884_2042145_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|2042196_2042547_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001110821.1|2043056_2043353_-	peptidoglycan hydrolase	NA	A0A1P8L6B4	Staphylococcus_phage	94.9	1.1e-48
WP_000920038.1|2044042_2044534_-	staphylokinase	NA	A0A1W6JQ12	Staphylococcus_phage	99.4	4.7e-86
WP_000861038.1|2044724_2045480_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|2045491_2045746_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_031762631.1|2045797_2045905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072357969.1|2045957_2046134_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	96.6	6.5e-22
WP_000340977.1|2046276_2046651_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001040255.1|2046706_2046994_-	hypothetical protein	NA	A0A075LZJ6	Staphylococcus_phage	100.0	5.8e-44
WP_000654329.1|2047040_2047193_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	98.0	1.2e-19
WP_031927805.1|2047182_2050968_-	phage minor structural protein	NA	D2JLF9	Staphylococcus_phage	99.4	0.0e+00
WP_115288422.1|2050983_2052474_-|tail	phage tail protein	tail	D2JLF8	Staphylococcus_phage	99.8	1.8e-298
WP_042908137.1|2052473_2057123_-|tail	phage tail tape measure protein	tail	A0A1V0E5H1	Staphylococcus_phage	98.2	0.0e+00
WP_000570353.1|2057178_2057301_-	hypothetical protein	NA	D2JLF6	Staphylococcus_phage	100.0	6.9e-15
WP_000442602.1|2057360_2057807_-	hypothetical protein	NA	O80053	Staphylococcus_phage	96.6	1.9e-73
WP_000570652.1|2057871_2058825_-|tail	phage tail protein	tail	A7TWD0	Staphylococcus_phage	100.0	6.2e-175
WP_000611452.1|2058825_2059206_-	hypothetical protein	NA	D2JLF3	Staphylococcus_phage	100.0	5.8e-68
WP_000501244.1|2059202_2059580_-	HK97 gp10 family phage protein	NA	D2JLF2	Staphylococcus_phage	100.0	1.1e-61
WP_000975314.1|2059579_2059915_-|head,tail	head-tail adaptor protein	head,tail	A7TWC7	Staphylococcus_phage	100.0	1.1e-59
WP_001177483.1|2059901_2060234_-|head,tail	phage head-tail adapter protein	head,tail	D2JLF0	Staphylococcus_phage	100.0	2.1e-58
WP_001252099.1|2060242_2060401_-	hypothetical protein	NA	D2JLE9	Staphylococcus_phage	100.0	3.2e-20
WP_000849950.1|2060436_2061684_-|capsid	phage major capsid protein	capsid	A7TWC4	Staphylococcus_phage	100.0	5.0e-209
WP_000032525.1|2061771_2062356_-|head,protease	HK97 family phage prohead protease	head,protease	D2JLE7	Staphylococcus_phage	100.0	9.8e-107
WP_011447040.1|2062348_2063539_-|portal	phage portal protein	portal	D2JLE6	Staphylococcus_phage	100.0	1.8e-224
WP_000644965.1|2063604_2063844_-	membrane protein	NA	A7TWC1	Staphylococcus_phage	100.0	7.0e-35
WP_000133304.1|2063818_2065513_-|terminase	phage terminase large subunit	terminase	D2JLE4	Staphylococcus_phage	100.0	0.0e+00
WP_000919026.1|2065515_2065983_-|terminase	phage terminase small subunit P27 family	terminase	D2JLE3	Staphylococcus_phage	100.0	1.1e-81
WP_000817289.1|2066112_2066457_-	HNH endonuclease	NA	D2JLE2	Staphylococcus_phage	100.0	4.2e-65
WP_115288423.1|2066472_2066925_-	nucleoside triphosphate pyrophosphohydrolase family protein	NA	D2JLE1	Staphylococcus_phage	99.3	5.1e-79
WP_000282747.1|2067039_2067519_-	hypothetical protein	NA	D2JLE0	Staphylococcus_phage	100.0	3.8e-72
WP_000265043.1|2067541_2067742_-	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_000573772.1|2067882_2068083_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000195827.1|2068079_2068286_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	76.5	1.4e-20
WP_000185669.1|2068322_2068859_-	hypothetical protein	NA	R4IG63	Staphylococcus_phage	100.0	9.4e-96
WP_001057953.1|2068851_2069100_-	DUF1024 family protein	NA	A0A2K9VBU0	Staphylococcus_phage	97.6	1.3e-36
WP_000399886.1|2069092_2069368_-	hypothetical protein	NA	Q4ZCN9	Staphylococcus_virus	96.7	8.0e-43
WP_001808043.1|2069367_2069778_-	hypothetical protein	NA	Q4ZCP0	Staphylococcus_virus	100.0	8.0e-71
WP_001126836.1|2069788_2070037_-	hypothetical protein	NA	A0A2I6PDI0	Staphylococcus_phage	100.0	3.2e-43
WP_000536056.1|2070037_2070400_-	hypothetical protein	NA	B7T0B4	Staphylococcus_virus	80.0	2.0e-49
WP_001187268.1|2070400_2070586_-	DUF3113 family protein	NA	Q4ZA46	Staphylococcus_virus	96.7	4.6e-26
WP_069631884.1|2070590_2070995_-	DUF1064 domain-containing protein	NA	Q9G020	Staphylococcus_virus	97.0	2.6e-66
WP_001123673.1|2071004_2071226_-	DUF3269 family protein	NA	A7TWN4	Staphylococcus_phage	100.0	1.3e-35
WP_000628837.1|2071238_2071397_-	hypothetical protein	NA	A0A0H3U301	Staphylococcus_phage	100.0	3.4e-22
WP_000443353.1|2071393_2072179_-	ATP-binding protein	NA	A0A0H4J332	Staphylococcus_phage	100.0	1.9e-145
WP_015978328.1|2072974_2073667_-	hypothetical protein	NA	A0A0H4ISQ1	Staphylococcus_phage	100.0	8.0e-132
WP_015978330.1|2073679_2074231_-	hypothetical protein	NA	A0A0H4IPV5	Staphylococcus_phage	100.0	3.4e-101
WP_001288251.1|2074260_2075034_-	AAA family ATPase	NA	A0EWP9	Staphylococcus_virus	99.6	3.1e-140
WP_000002516.1|2075033_2075513_-	siphovirus Gp157 family protein	NA	A0A0H4J328	Staphylococcus_phage	100.0	1.1e-82
WP_000291067.1|2075527_2075788_-	DUF1108 family protein	NA	A1KX65	Staphylococcus_virus	100.0	8.9e-44
WP_000165365.1|2075792_2076095_-	DUF2482 family protein	NA	A0A0F6N3N3	Staphylococcus_phage	99.0	7.0e-48
WP_000066020.1|2076187_2076349_-	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_001120935.1|2076345_2076666_-	DUF771 domain-containing protein	NA	Q4ZDR7	Staphylococcus_virus	100.0	1.5e-56
WP_000801108.1|2076724_2076952_+	hypothetical protein	NA	A7TWL9	Staphylococcus_phage	100.0	1.7e-38
WP_000389906.1|2076953_2077145_-	hypothetical protein	NA	A7TWL8	Staphylococcus_phage	100.0	2.8e-26
WP_064138580.1|2077194_2077551_+	DUF2513 domain-containing protein	NA	A0A1P8L6H1	Staphylococcus_phage	99.2	2.3e-58
WP_001148859.1|2077545_2077740_-	hypothetical protein	NA	A0A1P8L6G6	Staphylococcus_phage	100.0	4.3e-19
WP_001148551.1|2077756_2078527_-	phage antirepressor KilAC domain-containing protein	NA	Q4ZCB0	Staphylococcus_virus	90.6	3.5e-128
WP_115288424.1|2078542_2078797_-	helix-turn-helix transcriptional regulator	NA	C5I625	Staphylococcus_phage	97.6	6.9e-41
WP_000874712.1|2078986_2079625_+	LexA family transcriptional regulator	NA	A0A0E3TAG1	Staphylococcus_phage	99.5	5.7e-116
WP_000694770.1|2079820_2080003_+	hypothetical protein	NA	A0A2I6PDF8	Staphylococcus_phage	98.3	9.1e-27
WP_001013104.1|2080038_2080185_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000191459.1|2080181_2080796_-	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
WP_000857174.1|2080903_2081941_+|integrase	site-specific integrase	integrase	A7TWL3	Staphylococcus_phage	99.7	1.7e-178
WP_047213639.1|2083334_2084351_-	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	1.1e-25
WP_000791409.1|2084372_2085428_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.6	1.9e-36
2085531:2085548	attR	TTTTGTTAATATTATTAA	NA	NA	NA	NA
>prophage 1
NZ_CP022683	Staphylococcus aureus strain 78 plasmid pPS00085.1A.1, complete sequence	39353	0	14639	39353	transposase	Staphylococcus_phage(42.86%)	13	NA	NA
WP_012816664.1|2770_3868_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010994055.1|3882_4752_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.5	6.7e-27
WP_012816665.1|4735_5461_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010994057.1|5489_5663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_115288471.1|5989_6664_-|transposase	IS6-like element ISSau6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	87.9	1.4e-112
WP_010994058.1|6893_7460_-	recombinase family protein	NA	E5FFF9	Burkholderia_phage	42.0	4.2e-30
WP_162007740.1|7811_8333_-	replication-associated protein RepA family protein	NA	NA	NA	NA	NA
WP_012816646.1|8329_8710_-	replication initiator protein A	NA	Q9MCM7	Streptococcus_virus	47.1	7.7e-20
WP_010994021.1|10457_11201_-	hypothetical protein	NA	A0A143FPS7	Mycobacterium_phage	27.3	9.5e-06
WP_010994022.1|11773_12604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012816649.1|12680_12995_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010994024.1|13147_13564_+	hypothetical protein	NA	A0A2H4JEH6	uncultured_Caudovirales_phage	55.9	3.8e-28
WP_010994026.1|13805_14639_+	exfoliative toxin B	NA	A0A0E3T8P7	Staphylococcus_phage	40.6	2.7e-49
>prophage 2
NZ_CP022683	Staphylococcus aureus strain 78 plasmid pPS00085.1A.1, complete sequence	39353	18474	19281	39353		Clostridium_phage(100.0%)	1	NA	NA
WP_010994033.1|18474_19281_-	ParA family protein	NA	E2ELL2	Clostridium_phage	27.1	4.2e-15
>prophage 3
NZ_CP022683	Staphylococcus aureus strain 78 plasmid pPS00085.1A.1, complete sequence	39353	31286	31916	39353	transposase	Staphylococcus_phage(100.0%)	1	NA	NA
WP_012816661.1|31286_31916_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	88.0	2.0e-105
