assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003354285.1_ASM335428v1	NZ_CP022588	Mycoplasma bovis strain MJ4 chromosome, complete genome	1	262912-262994	1	CRISPRCasFinder	no		DEDDh	Orphan	TCTGTACGAGATGTGCTTGAAGA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh	NA|110aa|up_2|NZ_CP022588.1_259967_260297_+,NA|196aa|down_6|NZ_CP022588.1_270750_271338_-,NA|726aa|down_7|NZ_CP022588.1_271431_273609_+,NA|462aa|down_8|NZ_CP022588.1_273620_275006_+	NA|466aa|up_9|NZ_CP022588.1_247165_248563_+	pfam02674, Colicin_V, Colicin V production protein	NA|639aa|up_8|NZ_CP022588.1_248676_250593_+	COG0187, GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair]	NA|862aa|up_7|NZ_CP022588.1_250606_253192_+	PRK05561, PRK05561, DNA topoisomerase 4 subunit A	NA|310aa|up_6|NZ_CP022588.1_253333_254263_+	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|239aa|up_5|NZ_CP022588.1_254264_254981_+	cd06590, RNase_HII_bacteria_HIII_like, Bacterial type 2 ribonuclease, HII and HIII-like	NA|325aa|up_4|NZ_CP022588.1_256825_257800_+	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|343aa|up_3|NZ_CP022588.1_258400_259429_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|110aa|up_2|NZ_CP022588.1_259967_260297_+	NA	NA|232aa|up_1|NZ_CP022588.1_260540_261236_-	COG0357, GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane]	NA|329aa|up_0|NZ_CP022588.1_261219_262206_-	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|339aa|down_0|NZ_CP022588.1_263993_265010_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|276aa|down_1|NZ_CP022588.1_265173_266001_-	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD	NA|315aa|down_2|NZ_CP022588.1_266682_267627_-	pfam04231, Endonuclease_1, Endonuclease I	NA|649aa|down_3|NZ_CP022588.1_267725_269672_+	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|185aa|down_4|NZ_CP022588.1_269734_270289_-	PRK02230, PRK02230, inorganic pyrophosphatase; Provisional	NA|90aa|down_5|NZ_CP022588.1_270367_270637_+	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|196aa|down_6|NZ_CP022588.1_270750_271338_-	NA	NA|726aa|down_7|NZ_CP022588.1_271431_273609_+	NA	NA|462aa|down_8|NZ_CP022588.1_273620_275006_+	NA	NA|112aa|down_9|NZ_CP022588.1_275005_275341_+	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only]
GCF_003354285.1_ASM335428v1	NZ_CP022588	Mycoplasma bovis strain MJ4 chromosome, complete genome	2	657258-657364	2	CRISPRCasFinder	no		DEDDh	Orphan	ATTTTTATCTTGTTGATTTAGGTTGCCTTGATCTT	35	0	0	NA	NA	NA	1	1	Orphan	DEDDh	NA|506aa|up_9|NZ_CP022588.1_636434_637952_-,NA|416aa|up_2|NZ_CP022588.1_652424_653672_+,NA	NA|506aa|up_9|NZ_CP022588.1_636434_637952_-	NA	NA|856aa|up_8|NZ_CP022588.1_637993_640561_-	pfam01732, DUF31, Putative peptidase (DUF31)	NA|749aa|up_7|NZ_CP022588.1_640589_642836_-	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein	NA|742aa|up_6|NZ_CP022588.1_643022_645248_-	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein	NA|853aa|up_5|NZ_CP022588.1_645339_647898_-	pfam01732, DUF31, Putative peptidase (DUF31)	NA|737aa|up_4|NZ_CP022588.1_647925_650136_-	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein	NA|655aa|up_3|NZ_CP022588.1_650326_652291_-	COG0272, Lig, NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]	NA|416aa|up_2|NZ_CP022588.1_652424_653672_+	NA	NA|396aa|up_1|NZ_CP022588.1_653805_654993_+	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|274aa|up_0|NZ_CP022588.1_655081_655903_+	COG1481, COG1481, Uncharacterized protein conserved in bacteria [Function unknown]	NA|236aa|down_0|NZ_CP022588.1_657610_658318_+	pfam09568, RE_MjaI, MjaI restriction endonuclease	NA|353aa|down_1|NZ_CP022588.1_658325_659384_-	pfam01555, N6_N4_Mtase, DNA methylase	NA|321aa|down_2|NZ_CP022588.1_659567_660530_+	COG1466, HolA, DNA polymerase III, delta subunit [DNA replication, recombination, and repair]	NA|343aa|down_3|NZ_CP022588.1_661123_662152_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|145aa|down_4|NZ_CP022588.1_662584_663019_+	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|136aa|down_5|NZ_CP022588.1_663020_663428_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|111aa|down_6|NZ_CP022588.1_663653_663986_+	cd06981, cupin_reut_a1446, Cupriavidus pinatubonensis reut_a1446 and related proteins, cupin domain	NA|296aa|down_7|NZ_CP022588.1_663987_664875_+	cd02541, UGPase_prokaryotic, Prokaryotic UGPase catalyses the synthesis of UDP-glucose	NA|911aa|down_8|NZ_CP022588.1_665249_667982_+	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|621aa|down_9|NZ_CP022588.1_668231_670094_+	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only]
GCF_003354285.1_ASM335428v1	NZ_CP022588	Mycoplasma bovis strain MJ4 chromosome, complete genome	3	987735-988160	1	CRT	no		DEDDh	Orphan	ACACCANCTAACCCAGGACAAGGTACACCA	30	3	4	987765-987782|987861-987878|988113-988130|988113-988130	NZ_CP022588.1_987717-987734|NZ_CP022588.1_987717-987734|NZ_CP022588.1_987079-987096|NZ_CP022588.1_987717-987734	NA	8	8	Orphan	DEDDh	NA|64aa|up_4|NZ_CP022588.1_977546_977738_+,NA|121aa|up_0|NZ_CP022588.1_987054_987417_+,NA|183aa|down_0|NZ_CP022588.1_988593_989142_+,NA|92aa|down_7|NZ_CP022588.1_999478_999754_-	NA|149aa|up_9|NZ_CP022588.1_970083_970530_-	PRK14644, PRK14644, hypothetical protein; Provisional	NA|191aa|up_8|NZ_CP022588.1_970669_971242_-	PRK04296, PRK04296, thymidine kinase; Provisional	NA|457aa|up_7|NZ_CP022588.1_971317_972688_-	pfam00883, Peptidase_M17, Cytosol aminopeptidase family, catalytic domain	NA|343aa|up_6|NZ_CP022588.1_973120_974149_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|336aa|up_5|NZ_CP022588.1_974359_975367_+	PRK09609, PRK09609, hypothetical protein; Provisional	NA|64aa|up_4|NZ_CP022588.1_977546_977738_+	NA	NA|201aa|up_3|NZ_CP022588.1_977990_978593_+	TIGR00927, retinal_rod, K+-dependent Na+/Ca+ exchanger	NA|154aa|up_2|NZ_CP022588.1_978768_979230_+	PTZ00449, PTZ00449, 104 kDa microneme/rhoptry antigen; Provisional	NA|471aa|up_1|NZ_CP022588.1_979585_980998_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|121aa|up_0|NZ_CP022588.1_987054_987417_+	NA	NA|183aa|down_0|NZ_CP022588.1_988593_989142_+	NA	NA|250aa|down_1|NZ_CP022588.1_989351_990101_+	pfam00589, Phage_integrase, Phage integrase family	NA|343aa|down_2|NZ_CP022588.1_990724_991753_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|615aa|down_3|NZ_CP022588.1_992033_993878_+	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	NA|384aa|down_4|NZ_CP022588.1_994013_995165_+	TIGR03490, Uncharacterized_lipoprotein_lpp, mycoides cluster lipoprotein, LppA/P72 family	NA|806aa|down_5|NZ_CP022588.1_995354_997772_+	pfam11074, DUF2779, Domain of unknown function(DUF2779)	NA|478aa|down_6|NZ_CP022588.1_997870_999304_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|92aa|down_7|NZ_CP022588.1_999478_999754_-	NA	NA|474aa|down_8|NZ_CP022588.1_1000051_1001473_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|438aa|down_9|NZ_CP022588.1_1001465_1002779_-	PRK07139, PRK07139, amidase; Provisional
