The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	0	9765	1919901	protease	uncultured_Mediterranean_phage(100.0%)	5	NA	NA
WP_050948465.1|1781_2858_-	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_050948466.1|3015_3696_+	vancomycin high temperature exclusion protein	NA	NA	NA	NA	NA
WP_050948467.1|5982_7287_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_050948468.1|7288_8179_-	acetyl-CoA carboxylase, carboxyltransferase subunit beta	NA	NA	NA	NA	NA
WP_050948469.1|8373_9765_+|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	30.8	1.2e-22
>prophage 2
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	15908	17579	1919901		Klosneuvirus(100.0%)	1	NA	NA
WP_050848571.1|15908_17579_-	energy-dependent translational throttle protein EttA	NA	A0A1V0SKJ1	Klosneuvirus	27.3	1.1e-41
>prophage 3
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	21771	23811	1919901		Acidianus_filamentous_virus(100.0%)	1	NA	NA
WP_114934724.1|21771_23811_+	excinuclease ABC subunit B	NA	B2CRJ8	Acidianus_filamentous_virus	33.1	3.4e-05
>prophage 4
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	32730	37353	1919901		Streptococcus_phage(33.33%)	3	NA	NA
WP_050948483.1|32730_33984_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	45.8	1.9e-91
WP_048949919.1|34069_35218_-	molecular chaperone DnaJ	NA	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	34.4	2.4e-24
WP_050948484.1|35445_37353_-	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	49.6	1.3e-144
>prophage 5
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	44714	51032	1919901		Erysipelothrix_phage(25.0%)	5	NA	NA
WP_005657612.1|44714_46139_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.5	6.4e-43
WP_014550691.1|46297_46840_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.9	2.7e-26
WP_050948488.1|46851_48918_+	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	36.8	7.6e-45
WP_050948489.1|49057_49684_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_050948490.1|49787_51032_+	uracil transporter	NA	Q9KX94	Enterobacteria_phage	34.4	1.2e-53
>prophage 6
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	54424	54709	1919901		Bacillus_phage(100.0%)	1	NA	NA
WP_005652932.1|54424_54709_-	integration host factor subunit beta	NA	A7KV42	Bacillus_phage	40.0	4.1e-10
>prophage 7
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	65432	75190	1919901	tRNA	Bacillus_phage(25.0%)	8	NA	NA
WP_032824094.1|65432_67160_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	31.0	1.5e-70
WP_050948496.1|67451_68141_-	bifunctional protein-disulfide isomerase/oxidoreductase DsbC	NA	NA	NA	NA	NA
WP_105880429.1|68273_69371_+	peptide chain release factor 2	NA	A0A0S4KWG0	Pseudomonas_phage	44.1	7.5e-07
WP_050838325.1|69524_71033_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	37.4	6.5e-86
WP_012055457.1|71119_72055_-	malate dehydrogenase	NA	NA	NA	NA	NA
WP_050848262.1|72261_72717_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_050948497.1|72716_73607_+	TIGR01777 family protein	NA	NA	NA	NA	NA
WP_050948498.1|73672_75190_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	40.0	9.5e-85
>prophage 8
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	90475	91168	1919901		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_050948505.1|90475_91168_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	50.7	3.6e-55
>prophage 9
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	97318	103835	1919901	tRNA	uncultured_Mediterranean_phage(33.33%)	6	NA	NA
WP_114934726.1|97318_98608_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	52.1	1.9e-94
WP_080358466.1|98658_99699_-	selenide, water dikinase SelD	NA	NA	NA	NA	NA
WP_050848281.1|99755_100712_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	A0A1W6JP29	Morganella_phage	25.1	7.9e-21
WP_050948511.1|100758_101526_-	TSUP family transporter	NA	NA	NA	NA	NA
WP_050948512.1|101543_102404_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA	NA
WP_114934727.1|102761_103835_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	46.9	1.2e-86
>prophage 10
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	107210	110029	1919901		Staphylococcus_phage(50.0%)	3	NA	NA
WP_050948515.1|107210_108569_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	29.2	1.7e-24
WP_050948516.1|108571_109177_-	replication initiation negative regulator SeqA	NA	NA	NA	NA	NA
WP_050948517.1|109246_110029_+	alpha/beta fold hydrolase	NA	A0A2R8FDA5	Brazilian_cedratvirus	24.8	4.1e-07
>prophage 11
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	115253	116390	1919901		Synechococcus_phage(100.0%)	1	NA	NA
WP_050948521.1|115253_116390_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	29.1	9.1e-32
>prophage 12
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	122031	128613	1919901	tRNA	Catovirus(20.0%)	7	NA	NA
WP_050948526.1|122031_123411_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	28.2	1.0e-53
WP_005634038.1|123513_124023_+	peptidyl-prolyl cis-trans isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	34.0	3.6e-12
WP_050948527.1|124077_124866_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_009766751.1|125488_125953_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_050948528.1|126052_126376_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	43.4	6.8e-17
WP_050948529.1|126495_127491_-	2-hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	39.9	7.6e-67
WP_050948530.1|127503_128613_-	methionine biosynthesis PLP-dependent protein	NA	A0A141ZJM2	Faustovirus	27.5	8.3e-14
>prophage 13
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	135280	136417	1919901		Streptococcus_phage(100.0%)	1	NA	NA
WP_050948535.1|135280_136417_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	43.4	2.1e-52
>prophage 14
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	153070	158818	1919901	protease	Vibrio_phage(25.0%)	6	NA	NA
WP_048951898.1|153070_153958_-|protease	protease modulator HflC	protease	A0A2I7S9Z3	Vibrio_phage	27.0	3.0e-06
WP_048951899.1|153957_155178_-|protease	FtsH protease activity modulator HflK	protease	K4F6D5	Cronobacter_phage	24.3	1.9e-06
WP_050948544.1|155299_156007_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
WP_061671397.1|156067_157399_-	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA	NA
WP_005627318.1|157601_157832_-	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	51.5	2.3e-11
WP_050948546.1|158089_158818_-	3-oxoacyl-ACP reductase FabG	NA	A0A0K0KVL6	Prochlorococcus_phage	27.6	2.8e-10
>prophage 15
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	163000	164371	1919901		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_050948550.1|163000_164371_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.2	1.9e-39
>prophage 16
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	175869	183681	1919901		Tetraselmis_virus(50.0%)	7	NA	NA
WP_050948559.1|175869_176844_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	A0A2H4UV25	Bodo_saltans_virus	28.5	2.8e-05
WP_050948560.1|176951_177740_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_050846780.1|177819_178302_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050948561.1|178333_179074_-	pyruvate formate lyase 1-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	27.1	5.2e-20
WP_162790731.1|179204_181517_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	42.7	1.2e-168
WP_005658158.1|181558_182413_-	formate transporter FocA	NA	NA	NA	NA	NA
WP_050948563.1|182727_183681_-	transaldolase	NA	M4QQ61	Prochlorococcus_phage	32.5	9.7e-11
>prophage 17
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	187555	189522	1919901		Bacillus_virus(50.0%)	2	NA	NA
WP_114934729.1|187555_188527_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.8	3.6e-13
WP_050948566.1|188523_189522_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	1.8e-23
>prophage 18
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	194164	195091	1919901		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_112072260.1|194164_195091_+	ADP-glyceromanno-heptose 6-epimerase	NA	R9S880	Prochlorococcus_phage	36.4	4.5e-37
>prophage 19
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	199281	200793	1919901		Staphylococcus_phage(100.0%)	1	NA	NA
WP_012055403.1|199281_200793_+	D-xylose ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.1	9.9e-18
>prophage 20
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	208985	214115	1919901		Lactococcus_phage(50.0%)	4	NA	NA
WP_050948578.1|208985_209936_-	cysteine synthase A	NA	A0A1W6JHY1	Lactococcus_phage	50.9	2.5e-67
WP_050846777.1|210035_210854_-	sulfate transporter CysZ	NA	NA	NA	NA	NA
WP_050948579.1|211007_211994_+	cell division protein ZipA	NA	NA	NA	NA	NA
WP_050948580.1|212102_214115_+	NAD-dependent DNA ligase LigA	NA	A0A289ZTZ3	Serratia_phage	49.1	6.1e-140
>prophage 21
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	221382	224118	1919901		Planktothrix_phage(66.67%)	3	NA	NA
WP_005647692.1|221382_222021_-	cytochrome c biogenesis heme-transporting ATPase CcmA	NA	G9BWD6	Planktothrix_phage	26.1	6.5e-11
WP_005662808.1|222269_222905_+	superoxide dismutase [Mn]	NA	Q56AR7	Bacillus_thuringiensis_phage	56.5	2.2e-59
WP_044330614.1|223323_224118_+	phospholipid ABC transporter ATP-binding protein MlaF	NA	G9BWD6	Planktothrix_phage	31.9	5.0e-21
>prophage 22
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	229728	233136	1919901		Planktothrix_phage(33.33%)	3	NA	NA
WP_005647711.1|229728_230496_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	43.5	1.3e-34
WP_050948588.1|230671_231352_+	nicotinamide riboside transporter PnuC	NA	U5J9C5	Bacillus_phage	36.2	2.3e-38
WP_050948589.1|231498_233136_-	CTP synthase (glutamine hydrolyzing)	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	50.9	1.0e-156
>prophage 23
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	237607	241519	1919901		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_061671390.1|237607_241519_+	ATP-dependent RNA helicase HrpA	NA	A0A2H4UU36	Bodo_saltans_virus	30.2	3.9e-50
>prophage 24
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	250867	251461	1919901		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
WP_005651699.1|250867_251461_+	ribonuclease HII	NA	A0A0N9QYD4	Chrysochromulina_ericina_virus	40.0	1.8e-23
>prophage 25
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	258015	259860	1919901		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_050948599.1|258015_259860_+	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	29.3	3.6e-22
>prophage 26
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	263673	279235	1919901	head,capsid,plate,tail	Haemophilus_phage(60.0%)	16	NA	NA
WP_114934731.1|263673_264951_+|capsid	minor capsid protein	capsid	B7SDN5	Haemophilus_phage	52.4	1.1e-121
WP_111689168.1|265061_265547_+	phage virion morphogenesis protein	NA	B7SDN8	Haemophilus_phage	50.3	1.3e-32
WP_050948602.1|265800_266850_+	hypothetical protein	NA	B7SDN9	Haemophilus_phage	61.0	2.5e-108
WP_050948603.1|266849_267770_+|head	head protein	head	B7SDP1	Haemophilus_phage	71.9	7.9e-127
WP_050948604.1|267809_268115_+	hypothetical protein	NA	B7SDP3	Haemophilus_phage	50.0	1.6e-20
WP_111689169.1|268124_268556_+	DUF1320 domain-containing protein	NA	B7SDP4	Haemophilus_phage	60.9	6.1e-37
WP_114934732.1|268539_269202_+	DUF1834 family protein	NA	A0A0M3LQJ7	Mannheimia_phage	45.0	5.4e-45
WP_005688541.1|269173_269356_+	DUF2635 domain-containing protein	NA	A0A0M3LQM9	Mannheimia_phage	64.8	8.2e-12
WP_050948605.1|269348_270764_+|tail	phage tail protein	tail	B7SDP8	Haemophilus_phage	62.0	7.3e-156
WP_050948606.1|270773_271145_+	hypothetical protein	NA	A0A0M3LRV6	Mannheimia_phage	65.0	6.8e-37
WP_021034874.1|271144_271486_+	hypothetical protein	NA	A0A0M3LSI2	Mannheimia_phage	50.5	1.8e-20
WP_021034873.1|271500_271707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050948608.1|274044_275379_+	phage morphogenesis protein	NA	F6MIL2	Haemophilus_phage	45.6	1.4e-108
WP_050948609.1|276506_277142_+|plate	phage baseplate assembly protein V	plate	A0A0M3LPA3	Mannheimia_phage	57.2	1.6e-62
WP_050948610.1|277211_277562_+	hypothetical protein	NA	A0A0M3LQK5	Mannheimia_phage	74.1	2.4e-44
WP_050948786.1|278641_279235_+	DUF2313 domain-containing protein	NA	F6MIL7	Haemophilus_phage	64.0	2.0e-67
>prophage 27
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	282687	283533	1919901		Haemophilus_phage(100.0%)	1	NA	NA
WP_050948613.1|282687_283533_+	hypothetical protein	NA	F6MIM2	Haemophilus_phage	71.0	2.6e-116
>prophage 28
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	294274	297927	1919901		Catovirus(25.0%)	4	NA	NA
WP_061671256.1|294274_295252_-	glycosyltransferase	NA	A0A1V0SAE6	Catovirus	30.6	8.4e-26
WP_050948620.1|295262_296822_-	EcbG	NA	B2ZYD9	Ralstonia_phage	27.2	3.6e-31
WP_050948788.1|296818_297196_-	HAD-IIIC family phosphatase	NA	A0A2K9L459	Tupanvirus	41.0	2.8e-14
WP_050948621.1|297204_297927_-	capsular biosynthesis protein	NA	A0A222YX14	Synechococcus_phage	31.2	7.3e-19
>prophage 29
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	302419	304827	1919901		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_050948624.1|302419_303685_-	UDP-N-acetyl-D-mannosamine dehydrogenase	NA	M1HPJ2	Paramecium_bursaria_Chlorella_virus	27.4	8.9e-28
WP_050948625.1|303702_304827_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A2P1EJ01	Megavirus	30.5	2.6e-31
>prophage 30
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	308367	316914	1919901		Escherichia_phage(83.33%)	9	NA	NA
WP_050948629.1|308367_309021_+	ABC transporter ATP-binding protein	NA	M1HXU1	Acanthocystis_turfacea_Chlorella_virus	25.7	3.2e-05
WP_050948630.1|309811_310090_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_050948631.1|310099_310462_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050948632.1|310436_311546_-	transglutaminase family protein	NA	NA	NA	NA	NA
WP_061671258.1|311798_314222_+	molybdopterin-dependent oxidoreductase	NA	A0A077SK27	Escherichia_phage	50.6	9.1e-223
WP_038441398.1|314232_314850_+	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	57.8	5.8e-73
WP_050948634.1|314851_315691_+	dimethyl sulfoxide reductase anchor subunit	NA	A0A077SK59	Escherichia_phage	31.1	8.5e-19
WP_050948635.1|315802_316414_+	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	32.5	3.0e-21
WP_061671259.1|316413_316914_+	ferredoxin-type protein NapF	NA	A0A077SLP0	Escherichia_phage	31.8	3.2e-13
>prophage 31
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	334845	335493	1919901		Planktothrix_phage(100.0%)	1	NA	NA
WP_005669738.1|334845_335493_-	thiamine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.2	2.8e-22
>prophage 32
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	347614	347875	1919901		Staphylococcus_phage(100.0%)	1	NA	NA
WP_005647910.1|347614_347875_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	51.3	3.9e-15
>prophage 33
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	356311	363951	1919901		Rhizobium_phage(50.0%)	3	NA	NA
WP_112087768.1|356311_357412_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	33.0	9.7e-47
WP_114934735.1|357413_358493_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_114934736.1|358734_363951_+	autotransporter domain-containing protein	NA	Q9LA58	Enterobacterial_phage	35.5	2.5e-68
>prophage 34
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	367437	368985	1919901		Micromonas_sp._RCC1109_virus(100.0%)	1	NA	NA
WP_050948658.1|367437_368985_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	25.5	3.5e-10
>prophage 35
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	373352	373838	1919901		Staphylococcus_phage(100.0%)	1	NA	NA
WP_005647965.1|373352_373838_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.7	3.7e-27
>prophage 36
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	387272	406571	1919901	tRNA	Indivirus(11.11%)	19	NA	NA
WP_050948669.1|387272_388199_+	bifunctional riboflavin kinase/FAD synthetase	NA	A0A1V0SD03	Indivirus	31.9	4.1e-06
WP_114934740.1|388227_391053_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2P1ELB8	Moumouvirus	27.2	2.8e-82
WP_005651576.1|391173_391524_+	purine nucleoside phosphoramidase	NA	NA	NA	NA	NA
WP_032824530.1|391523_391874_+	DUF1425 domain-containing protein	NA	NA	NA	NA	NA
WP_050948671.1|391877_392930_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_050948672.1|392926_394114_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	F5CA72	Streptococcus_phi-m46.1-like_phage	24.5	4.0e-22
WP_032824524.1|394466_395141_-	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA	NA
WP_032824522.1|395125_395377_-	YheU family protein	NA	NA	NA	NA	NA
WP_050948673.1|395399_396056_-	nucleoid occlusion factor SlmA	NA	NA	NA	NA	NA
WP_044330861.1|396059_396515_-	dUTP diphosphatase	NA	Q2NP83	Xanthomonas_phage	60.1	1.2e-48
WP_050948674.1|397204_398419_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.4	7.7e-37
WP_050846688.1|398581_399247_+	JAB domain-containing protein	NA	NA	NA	NA	NA
WP_005542826.1|399460_399697_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_005613503.1|399708_399879_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_050948675.1|400225_401590_+	diaminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.0	5.2e-26
WP_050948676.1|401781_403317_+	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
WP_050948677.1|403543_404359_+	DNA-formamidopyrimidine glycosylase	NA	G3MA33	Bacillus_virus	33.2	5.2e-29
WP_005690625.1|404432_405452_-	outer membrane-stress sensor serine endopeptidase DegS	NA	A0A1B1IT49	uncultured_Mediterranean_phage	27.7	3.1e-15
WP_050948678.1|405452_406571_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.0	2.8e-49
>prophage 37
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	417389	424062	1919901		Staphylococcus_phage(25.0%)	6	NA	NA
WP_050948688.1|417389_418595_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	44.7	4.4e-08
WP_114934741.1|418715_420026_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.4	1.9e-129
WP_046942415.1|420109_420529_+	DUF2251 domain-containing protein	NA	NA	NA	NA	NA
WP_050948690.1|420541_421123_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050948691.1|421123_422305_+	glutathionylspermidine synthase family protein	NA	E5E3Y5	Acinetobacter_phage	45.1	3.0e-94
WP_050948692.1|422535_424062_-	catalase	NA	A0A2K9L0T1	Tupanvirus	47.3	4.7e-100
>prophage 38
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	429866	433429	1919901	tRNA	Staphylococcus_phage(50.0%)	2	NA	NA
WP_050948695.1|429866_432461_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	43.3	6.0e-188
WP_050948696.1|432709_433429_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	45.9	1.2e-26
>prophage 39
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	441864	445125	1919901		Streptococcus_phage(50.0%)	2	NA	NA
WP_050948701.1|441864_442629_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	35.3	1.5e-33
WP_013526207.1|444714_445125_-	8-oxo-dGTP diphosphatase MutT	NA	G8DF69	Emiliania_huxleyi_virus	30.0	5.3e-06
>prophage 40
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	449263	454094	1919901		Vibrio_phage(33.33%)	6	NA	NA
WP_050848443.1|449263_450115_-	thymidylate synthase	NA	H9EB68	Vibrio_phage	78.8	1.5e-135
WP_050948706.1|450124_450931_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_050948707.1|450939_451734_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_050846598.1|451733_452324_-	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_050948708.1|452404_453511_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.2	1.6e-65
WP_050948709.1|453611_454094_+	type 3 dihydrofolate reductase	NA	A0A076GDN3	Bacillus_phage	46.0	2.6e-36
>prophage 41
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	457996	461077	1919901		Leptospira_phage(100.0%)	1	NA	NA
WP_050948713.1|457996_461077_-	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	24.2	9.0e-58
>prophage 42
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	466579	476760	1919901		Bacillus_phage(33.33%)	12	NA	NA
WP_050948715.1|466579_467596_+	nucleoid-associated protein YejK	NA	A0A1V0E8C0	Vibrio_phage	44.6	5.6e-73
WP_005648317.1|467661_468075_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_050948716.1|468125_468809_+	response regulator	NA	W8CYM9	Bacillus_phage	39.3	3.4e-34
WP_076773679.1|468904_469252_+	hypothetical protein	NA	W8CYF6	Bacillus_phage	36.1	1.1e-09
WP_041175278.1|469284_470256_-	elongation factor P--(R)-beta-lysine ligase	NA	A0A2K9L3L6	Tupanvirus	27.4	3.6e-29
WP_021034728.1|470466_472266_+	fumarate reductase (quinol) flavoprotein subunit	NA	M1HTN0	Paramecium_bursaria_Chlorella_virus	24.9	3.8e-16
WP_005639269.1|472258_473029_+	succinate dehydrogenase/fumarate reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_061671283.1|473039_473450_+	fumarate reductase subunit FrdC	NA	NA	NA	NA	NA
WP_061671284.1|473461_473806_+	fumarate reductase subunit FrdD	NA	NA	NA	NA	NA
WP_061671285.1|473913_474654_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
WP_041175277.1|474640_474946_-	trp operon repressor	NA	NA	NA	NA	NA
WP_111688743.1|474978_476760_-	transglycosylase SLT domain-containing protein	NA	K4NWI2	Pseudomonas_phage	39.5	2.6e-17
>prophage 43
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	480035	481556	1919901		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_012055245.1|480035_481556_-	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.2	9.7e-13
>prophage 44
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	490110	502294	1919901	tRNA	Klosneuvirus(20.0%)	10	NA	NA
WP_050948730.1|490110_492735_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.5	2.1e-79
WP_050822941.1|492812_493004_+	carbon storage regulator CsrA	NA	A0A2I7RT00	Vibrio_phage	62.7	6.6e-12
WP_005632779.1|493025_493913_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	45.9	1.8e-59
WP_050948731.1|494038_495412_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_050948732.1|495555_496437_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_032824375.1|496609_498226_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	49.9	1.6e-135
WP_005632773.1|498376_498934_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_050948733.1|499043_500237_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_050948734.1|500268_501078_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_021034702.1|501211_502294_+	anaerobic sulfatase maturase	NA	A0A1B2IC15	Erwinia_phage	24.1	3.0e-08
>prophage 45
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	523132	529243	1919901	tRNA	Planktothrix_phage(20.0%)	7	NA	NA
WP_005635730.1|523132_523789_-	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	34.0	1.6e-25
WP_050948740.1|523807_525025_-	signal recognition particle-docking protein FtsY	NA	D6PHS7	uncultured_phage	35.5	6.3e-15
WP_014551074.1|525121_525703_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_005685948.1|525713_526196_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_050948741.1|526244_527015_-	glycosyltransferase family 25 protein	NA	A0A1V0SBR2	Catovirus	29.4	1.9e-09
WP_050948742.1|527111_527759_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	43.9	6.1e-41
WP_076773565.1|528019_529243_+	multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR	NA	A0A0C5K935	Enterococcus_phage	45.7	3.5e-90
>prophage 46
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	539040	539673	1919901		Streptococcus_phage(100.0%)	1	NA	NA
WP_050948790.1|539040_539673_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	41.4	1.4e-29
>prophage 47
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	543807	556143	1919901		Escherichia_phage(20.0%)	10	NA	NA
WP_114934747.1|543807_544881_-	membrane-bound lytic murein transglycosylase MltC	NA	W6ARS2	Escherichia_phage	28.1	1.1e-05
WP_005648477.1|544895_545168_-	oxidative damage protection protein	NA	NA	NA	NA	NA
WP_105905446.1|545145_546282_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_005625828.1|546458_546671_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_005652337.1|546748_547432_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_112089699.1|547607_548840_+	murein hydrolase activator EnvC	NA	A0A292GJG6	Xanthomonas_phage	40.2	1.2e-08
WP_050948755.1|548839_549682_+	divergent polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_050948756.1|549742_550486_-	glycosyltransferase family 25 protein	NA	A0A2P1EL82	Moumouvirus	28.9	3.2e-09
WP_050948757.1|551008_554902_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	52.8	2.0e-115
WP_021034665.1|555255_556143_-	tyrosine recombinase XerC	NA	S5W9T9	Leptospira_phage	28.3	5.5e-16
>prophage 48
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	569011	569806	1919901		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_038440421.1|569011_569806_+	aquaporin	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	31.9	5.8e-17
>prophage 49
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	582038	594050	1919901	tRNA	Enterobacteria_phage(20.0%)	9	NA	NA
WP_114934748.1|582038_583955_+	site-specific DNA-methyltransferase	NA	Q1MVP0	Enterobacteria_phage	43.0	2.6e-132
WP_050948769.1|583956_586932_+	type III restriction-modification system endonuclease	NA	Q71TG1	Escherichia_phage	48.6	5.0e-255
WP_050948770.1|586998_587418_-	ribonuclease E inhibitor RraB	NA	NA	NA	NA	NA
WP_114934749.1|587526_588546_+|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_005692361.1|588555_589305_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	50.2	2.6e-67
WP_038439558.1|589313_589892_+	DedA family protein	NA	NA	NA	NA	NA
WP_005671888.1|589900_590086_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005692357.1|590109_591327_+	murein hydrolase activator NlpD	NA	A0A292GJG6	Xanthomonas_phage	43.8	2.3e-12
WP_114934750.1|591464_594050_+	DNA mismatch repair protein MutS	NA	E5RUN9	Heterocapsa_circularisquama_DNA_virus	22.2	1.6e-28
>prophage 50
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	597275	599135	1919901		Catovirus(100.0%)	1	NA	NA
WP_114934753.1|597275_599135_+	selenocysteine-specific translation elongation factor	NA	A0A1V0SC62	Catovirus	26.3	9.4e-10
>prophage 51
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	605828	608774	1919901	protease	Agrobacterium_phage(33.33%)	4	NA	NA
WP_114934755.1|605828_606410_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	60.8	7.6e-59
WP_005658618.1|606419_607655_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.2	2.2e-124
WP_005648602.1|607798_608215_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_005648601.1|608216_608774_+	transcription termination/antitermination protein NusG	NA	A0A291AUS6	Sinorhizobium_phage	26.1	2.6e-08
>prophage 52
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	616470	617805	1919901		Erwinia_phage(100.0%)	1	NA	NA
WP_050948919.1|616470_617805_+	HslU--HslV peptidase ATPase subunit	NA	A0A173GFL6	Erwinia_phage	29.3	1.2e-43
>prophage 53
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	623133	627083	1919901		Musca_hytrovirus(50.0%)	4	NA	NA
WP_005691308.1|623133_624381_+	NupC/NupG family nucleoside CNT transporter	NA	B2YG43	Musca_hytrovirus	24.1	9.1e-17
WP_050948926.1|624466_625390_+	ribokinase	NA	NA	NA	NA	NA
WP_050847456.1|625417_626422_+	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_050837863.1|626531_627083_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	31.2	2.2e-23
>prophage 54
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	630638	639127	1919901		Phaeocystis_globosa_virus(50.0%)	2	NA	NA
WP_050948932.1|630638_634889_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	65.7	1.3e-03
WP_050948933.1|635095_639127_-	DNA-directed RNA polymerase subunit beta	NA	F2Y186	Organic_Lake_phycodnavirus	30.9	8.5e-24
>prophage 55
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	650539	658268	1919901	tRNA	uncultured_Mediterranean_phage(20.0%)	7	NA	NA
WP_005627640.1|650539_650800_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	57.8	9.0e-20
WP_050948937.1|650943_652164_-	tyrosine transporter	NA	NA	NA	NA	NA
WP_041175263.1|652200_652782_-	thymidine kinase	NA	A0A023W530	Serratia_phage	51.3	1.1e-52
WP_114934757.1|652923_653952_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.0	6.8e-111
WP_005627632.1|654181_654397_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_114934758.1|654530_656312_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	35.9	2.8e-64
WP_005657994.1|656381_658268_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.5	2.4e-37
>prophage 56
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	666326	668283	1919901		uncultured_virus(50.0%)	2	NA	NA
WP_005629492.1|666326_666617_+	co-chaperone GroES	NA	A0A221S322	uncultured_virus	40.0	4.5e-12
WP_114934760.1|666636_668283_+	chaperonin GroEL	NA	A0A2I7SAK5	Vibrio_phage	68.2	1.3e-188
>prophage 57
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	676878	680275	1919901		Bacillus_phage(50.0%)	2	NA	NA
WP_050948956.1|676878_678537_-	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	28.6	6.0e-32
WP_044345224.1|678529_680275_-	ABC transporter ATP-binding protein/permease	NA	A0A1V0SJ29	Klosneuvirus	20.5	1.5e-09
>prophage 58
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	684376	693586	1919901	tRNA	Tupanvirus(25.0%)	10	NA	NA
WP_050949050.1|684376_686293_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	31.2	1.2e-68
WP_050949051.1|686302_686839_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050949052.1|686854_687406_+|tRNA	tRNA threonylcarbamoyladenosine biosynthesis protein RimN	tRNA	NA	NA	NA	NA
WP_050949053.1|687409_688228_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_050949054.1|688224_688782_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_050949055.1|688778_689543_-	glycosyltransferase family 2 protein	NA	A0A1V0SH65	Hokovirus	36.8	1.7e-05
WP_050949056.1|689605_690889_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_050949057.1|690885_691356_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	40.6	9.3e-23
WP_005629976.1|691352_691565_+	YceK/YidQ family lipoprotein	NA	NA	NA	NA	NA
WP_050949058.1|691570_693586_+	DNA helicase Rep	NA	A7KV33	Bacillus_phage	40.1	1.7e-118
>prophage 59
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	696814	708724	1919901		Bacillus_virus(20.0%)	10	NA	NA
WP_005650876.1|696814_697531_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	33.8	5.7e-16
WP_012055145.1|697696_698812_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_050949061.1|698865_699801_+	alpha/beta hydrolase	NA	Q8V549	Monkeypox_virus	25.9	9.8e-08
WP_050949062.1|699985_701086_+	nitrate reductase	NA	NA	NA	NA	NA
WP_114934761.1|701111_703589_+	trimethylamine-N-oxide reductase TorA	NA	A0A077SK27	Escherichia_phage	29.7	2.8e-78
WP_044345235.1|704290_704602_+	DUF5389 family protein	NA	NA	NA	NA	NA
WP_114934762.1|704636_706007_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	33.5	2.9e-32
WP_005650892.1|706164_706536_-	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_005626605.1|706590_707082_-	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_105897903.1|707353_708724_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	47.8	1.3e-112
>prophage 60
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	716115	717300	1919901		Hokovirus(100.0%)	1	NA	NA
WP_005667564.1|716115_717300_-	elongation factor Tu	NA	A0A1V0SGC3	Hokovirus	27.2	6.1e-31
>prophage 61
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	724893	726453	1919901	tRNA	Prochlorococcus_phage(50.0%)	2	NA	NA
WP_050949281.1|724893_725850_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	28.1	3.2e-06
WP_050949280.1|725943_726453_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.6	1.8e-19
>prophage 62
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	734801	735777	1919901		Streptococcus_phage(50.0%)	2	NA	NA
WP_050949416.1|734801_735422_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	34.0	6.1e-22
WP_021034490.1|735537_735777_+	sulfurtransferase TusA	NA	A0A140XB86	Dickeya_phage	63.9	6.2e-07
>prophage 63
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	740047	740671	1919901		Enterobacteria_phage(100.0%)	1	NA	NA
WP_005648504.1|740047_740671_+	repressor LexA	NA	A5LH73	Enterobacteria_phage	41.1	2.2e-11
>prophage 64
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	745334	755371	1919901	transposase	Synechococcus_phage(50.0%)	11	NA	NA
WP_050949411.1|745334_746012_+	glycosyltransferase family 25 protein	NA	A0A1V0S9H0	Catovirus	26.6	4.0e-11
WP_080358491.1|746004_747036_+	glycosyltransferase family 9 protein	NA	NA	NA	NA	NA
WP_050949409.1|747077_747941_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_105880459.1|747980_748877_-	glycosyltransferase family 25 protein	NA	NA	NA	NA	NA
WP_050949407.1|748995_749823_+	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA	A0A096XT93	Enterococcus_phage	47.8	8.7e-08
WP_050949406.1|749832_750456_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050949405.1|750580_752035_-	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	NA	A0A1D8KPW3	Synechococcus_phage	32.3	1.1e-34
WP_005690234.1|752150_752693_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_005690236.1|752753_753104_-	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_050949404.1|753103_753802_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
WP_050949403.1|753886_755371_-	glucose-6-phosphate dehydrogenase	NA	E3SIC8	Synechococcus_phage	39.1	1.9e-82
>prophage 65
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	759973	764992	1919901		Heterosigma_akashiwo_virus(50.0%)	4	NA	NA
WP_005692036.1|759973_760966_+	aspartate--ammonia ligase	NA	A0A1C9C5F0	Heterosigma_akashiwo_virus	38.9	1.2e-51
WP_114934765.1|761030_761705_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_050949396.1|761750_762425_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_050949395.1|762571_764992_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	35.0	5.5e-119
>prophage 66
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	772861	776213	1919901		Hokovirus(50.0%)	2	NA	NA
WP_005667564.1|772861_774046_-	elongation factor Tu	NA	A0A1V0SGC3	Hokovirus	27.2	6.1e-31
WP_061671449.1|774110_776213_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	27.5	2.3e-60
>prophage 67
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	787725	787938	1919901	transposase	Macacine_betaherpesvirus(100.0%)	2	NA	NA
WP_105880460.1|787725_787833_-|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	62.5	1.5e-05
WP_105880461.1|787833_787938_-|transposase	transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	75.0	1.0e-06
>prophage 68
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	797236	799221	1919901		Staphylococcus_phage(50.0%)	3	NA	NA
WP_021034533.1|797236_797623_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	34.6	4.9e-06
WP_050949418.1|797619_798078_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_050848032.1|798156_799221_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	62.2	3.4e-113
>prophage 69
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	809619	811467	1919901		Catovirus(100.0%)	1	NA	NA
WP_061832737.1|809619_811467_+	DNA helicase RecQ	NA	A0A1V0SBK0	Catovirus	37.3	5.5e-87
>prophage 70
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	823622	830574	1919901		Lactococcus_phage(33.33%)	3	NA	NA
WP_050948803.1|823622_825164_+	threonine ammonia-lyase, biosynthetic	NA	A0A1W6JHY1	Lactococcus_phage	28.3	1.3e-09
WP_050948804.1|825202_828682_-	DNA polymerase III subunit alpha	NA	Q8W6C3	Saccharomonospora_phage	37.2	1.4e-192
WP_050948805.1|828921_830574_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	34.6	3.4e-80
>prophage 71
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	844113	855913	1919901	tRNA	Catovirus(20.0%)	9	NA	NA
WP_050847421.1|844113_845346_-	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	47.9	3.5e-106
WP_050848068.1|845375_846035_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_050948810.1|846168_847320_-	radical SAM family heme chaperone HemW	NA	NA	NA	NA	NA
WP_050948811.1|847436_849848_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.1	4.8e-224
WP_050948812.1|850038_850914_+	VirK/YbjX family protein	NA	NA	NA	NA	NA
WP_050948813.1|850941_851640_-|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
WP_050948814.1|851709_853029_+	ATP-dependent RNA helicase SrmB	NA	A0A1B1IS59	uncultured_Mediterranean_phage	30.3	7.5e-46
WP_050948815.1|853062_854442_-|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	77.7	1.1e-164
WP_050948816.1|854608_855913_-	MHS family MFS transporter	NA	Q6JIH2	Burkholderia_virus	28.6	6.5e-34
>prophage 72
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	859819	861276	1919901		Bacillus_virus(100.0%)	2	NA	NA
WP_050948822.1|859819_860557_-	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	24.6	1.7e-10
WP_050948823.1|860553_861276_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.0	5.1e-28
>prophage 73
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	867416	868733	1919901		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_061671316.1|867416_868733_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	27.2	8.6e-42
>prophage 74
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	885620	900311	1919901		Tupanvirus(16.67%)	13	NA	NA
WP_050948840.1|885620_886637_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	48.6	2.1e-88
WP_162790736.1|886680_887928_-	ATP-dependent RNA helicase RhlB	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	29.6	9.3e-38
WP_005645697.1|888044_888251_-	DNA gyrase inhibitor YacG	NA	NA	NA	NA	NA
WP_050948842.1|888243_888864_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_050948843.1|888934_890200_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	52.2	1.3e-100
WP_114934773.1|890323_891613_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_050948845.1|891762_893361_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.0	1.9e-75
WP_005655793.1|893548_893953_-	DoxX family protein	NA	NA	NA	NA	NA
WP_050948846.1|894065_895805_-	protein-disulfide reductase DsbD	NA	NA	NA	NA	NA
WP_005655790.1|895997_896708_+	two-component system response regulator ArcA	NA	W8CYM9	Bacillus_phage	31.1	7.9e-26
WP_050948847.1|897105_898476_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_050948848.1|898534_899272_-	epoxyqueuosine reductase QueH	NA	NA	NA	NA	NA
WP_050948849.1|899321_900311_-	octaprenyl diphosphate synthase	NA	A0A1V0SE37	Indivirus	22.5	2.6e-06
>prophage 75
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	903387	912542	1919901		Anguillid_herpesvirus(20.0%)	8	NA	NA
WP_050948852.1|903387_903810_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	41.5	6.0e-21
WP_050948853.1|903819_905124_-	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	28.4	4.8e-29
WP_050948854.1|905200_906244_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	50.8	2.1e-91
WP_005666098.1|906328_907741_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_050948855.1|907956_908940_+	CMP-Neu5Ac--lipooligosaccharide alpha 2-3 sialyltransferase	NA	NA	NA	NA	NA
WP_005666104.1|909071_910922_+	translational GTPase TypA	NA	E4ZFJ7	Streptococcus_phage	43.2	1.6e-22
WP_005666106.1|911009_911642_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_050948856.1|911834_912542_+	7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter	NA	A0A2I7SAW6	Vibrio_phage	53.9	4.9e-60
>prophage 76
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	916657	918502	1919901		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_050948859.1|916657_918502_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	2.1e-54
>prophage 77
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	922572	923547	1919901		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_050848127.1|922572_923547_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	38.2	1.3e-42
>prophage 78
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	932441	934655	1919901		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_021034388.1|932441_934274_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	44.2	5.1e-133
WP_005630954.1|934382_934655_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	61.1	5.9e-22
>prophage 79
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	938450	939794	1919901		Vibrio_phage(100.0%)	1	NA	NA
WP_050948867.1|938450_939794_-	type IV pilus secretin PilQ	NA	R9TEZ5	Vibrio_phage	22.3	9.1e-15
>prophage 80
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	946892	962344	1919901	tRNA	uncultured_Mediterranean_phage(40.0%)	10	NA	NA
WP_050948873.1|946892_948848_+	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	31.8	6.3e-41
WP_005691381.1|948956_949298_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_006996233.1|950132_950354_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_050948874.1|950350_950869_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_050948875.1|950933_952082_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.3	9.7e-90
WP_050948876.1|952426_953518_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_050948877.1|953642_954089_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114934775.1|954182_958520_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	Q9LA58	Enterobacterial_phage	33.5	7.1e-85
WP_050948879.1|958838_961670_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.3	0.0e+00
WP_050948880.1|961822_962344_+	single-stranded DNA-binding protein	NA	A0A2I7QRJ7	Vibrio_phage	71.7	1.6e-39
>prophage 81
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	968568	969156	1919901		Ugandan_cassava_brown_streak_virus(100.0%)	1	NA	NA
WP_042594202.1|968568_969156_-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	A0A0P0A2M4	Ugandan_cassava_brown_streak_virus	31.2	3.4e-14
>prophage 82
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	982447	983293	1919901		Salicola_phage(100.0%)	1	NA	NA
WP_005648902.1|982447_983293_+	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	39.4	2.7e-41
>prophage 83
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	986891	988334	1919901	tRNA	Escherichia_phage(100.0%)	1	NA	NA
WP_061671301.1|986891_988334_-|tRNA	glutamate--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	34.4	2.3e-11
>prophage 84
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	993930	995247	1919901		Burkholderia_virus(100.0%)	1	NA	NA
WP_005689473.1|993930_995247_-	MHS family MFS transporter	NA	Q6JIH2	Burkholderia_virus	28.7	1.6e-35
>prophage 85
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1004752	1007674	1919901		uncultured_virus(100.0%)	4	NA	NA
WP_061671299.1|1004752_1006921_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	51.6	4.7e-194
WP_005631184.1|1006895_1007102_-	heavy-metal-associated domain-containing protein	NA	A0A218MNH0	uncultured_virus	52.2	3.0e-10
WP_005666693.1|1007175_1007382_-	heavy-metal-associated domain-containing protein	NA	A0A218MNH0	uncultured_virus	50.7	1.1e-09
WP_012054944.1|1007467_1007674_-	heavy-metal-associated domain-containing protein	NA	A0A218MNH0	uncultured_virus	52.2	3.9e-10
>prophage 86
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1013892	1014447	1919901		Agrobacterium_phage(100.0%)	1	NA	NA
WP_005691822.1|1013892_1014447_+	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A223VZK2	Agrobacterium_phage	28.5	4.5e-08
>prophage 87
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1019342	1030573	1919901	tRNA	Salmonella_phage(16.67%)	13	NA	NA
WP_050948988.1|1019342_1020251_-	recombination-associated protein RdgC	NA	S4TWL4	Salmonella_phage	47.2	2.0e-66
WP_050948989.1|1020316_1021132_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	29.2	8.3e-19
WP_005660002.1|1021131_1022298_+	3-phenylpropionate MFS transporter	NA	NA	NA	NA	NA
WP_050948990.1|1022327_1023221_+	site-specific tyrosine recombinase XerD	NA	S5M9V8	Brevibacillus_phage	28.7	1.1e-21
WP_005656308.1|1023392_1023680_+	DUF5339 domain-containing protein	NA	NA	NA	NA	NA
WP_011961739.1|1023731_1024739_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.9	6.9e-07
WP_050948991.1|1024746_1025361_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_050847307.1|1025423_1025996_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_005662961.1|1026042_1026783_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_050948992.1|1026795_1027269_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA	NA
WP_050948993.1|1027290_1029057_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SFI4	Hokovirus	30.3	3.2e-07
WP_005688985.1|1029275_1029794_+	isoprenylcysteine carboxyl methyltransferase family protein	NA	NA	NA	NA	NA
WP_021035687.1|1029847_1030573_+	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	S5VMD2	Pseudomonas_phage	30.2	7.1e-22
>prophage 88
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1038346	1043252	1919901		Bodo_saltans_virus(33.33%)	5	NA	NA
WP_050948998.1|1038346_1039315_+	23S rRNA pseudouridine(955/2504/2580) synthase RluC	NA	A0A2H4UV25	Bodo_saltans_virus	28.2	6.2e-05
WP_005649254.1|1039405_1039681_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_050948999.1|1039776_1040733_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA	NA
WP_076773247.1|1040847_1042275_-	murein DD-endopeptidase MepM	NA	A0A2K9VGT1	Pontimonas_phage	48.7	2.9e-19
WP_050949036.1|1042445_1043252_+	zinc ABC transporter ATP-binding protein ZnuC	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	31.9	1.7e-16
>prophage 89
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1047979	1053535	1919901		Streptococcus_phage(33.33%)	6	NA	NA
WP_050949004.1|1047979_1048519_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	37.6	4.3e-24
WP_050949005.1|1048594_1049965_-	transporter	NA	NA	NA	NA	NA
WP_050949006.1|1050170_1050458_+	YfcZ/YiiS family protein	NA	NA	NA	NA	NA
WP_050949007.1|1050555_1051380_-	3',5'-cyclic-AMP phosphodiesterase	NA	NA	NA	NA	NA
WP_005630028.1|1051389_1052022_-	ADP-ribose diphosphatase	NA	A0A1S6L1P8	Vibrio_phage	35.2	3.5e-25
WP_114934784.1|1052215_1053535_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	39.8	2.5e-41
>prophage 90
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1057025	1065103	1919901	tRNA	Salmonella_virus(25.0%)	6	NA	NA
WP_114934786.1|1057025_1058909_+	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	33.2	4.8e-54
WP_050949011.1|1058951_1060094_-	ribonuclease D	NA	U3REX2	uncultured_virus	30.2	9.2e-08
WP_050949012.1|1060149_1061838_-	long-chain-fatty-acid--CoA ligase FadD	NA	A0A2H4PQM9	Staphylococcus_phage	26.0	8.8e-31
WP_005652218.1|1061880_1062432_-	Slp family lipoprotein	NA	NA	NA	NA	NA
WP_114934787.1|1062456_1063167_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_040034399.1|1063180_1065103_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	33.1	4.2e-98
>prophage 91
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1071783	1079499	1919901	tRNA	unidentified_phage(20.0%)	10	NA	NA
WP_114934792.1|1071783_1072998_+	IscS subfamily cysteine desulfurase	NA	H7BUW1	unidentified_phage	36.0	1.5e-32
WP_005654861.1|1073057_1073438_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	80.6	1.4e-53
WP_005649164.1|1073495_1073819_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	46.7	4.4e-24
WP_048940826.1|1073831_1074356_+	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_114934793.1|1074406_1075093_+	DUF2625 domain-containing protein	NA	NA	NA	NA	NA
WP_114934794.1|1075110_1076970_+	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.3	2.7e-110
WP_005656373.1|1077009_1077351_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_005659903.1|1077350_1077545_+	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_005691752.1|1077595_1078210_-	YfgM family protein	NA	NA	NA	NA	NA
WP_021035648.1|1078227_1079499_-|tRNA	histidine--tRNA ligase	tRNA	A0A2I2L577	Orpheovirus	26.1	4.4e-27
>prophage 92
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1085764	1086685	1919901		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_005669098.1|1085764_1086685_+	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.4	1.3e-17
>prophage 93
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1090043	1091339	1919901		Salmonella_phage(50.0%)	2	NA	NA
WP_050949020.1|1090043_1090508_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	53.5	1.0e-45
WP_050949021.1|1090568_1091339_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	42.9	2.2e-37
>prophage 94
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1095983	1097221	1919901		Saccharomonospora_phage(50.0%)	2	NA	NA
WP_005660907.1|1095983_1096571_-	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	40.5	2.8e-24
WP_005658079.1|1096579_1097221_-	uridine kinase	NA	A0A1V0SD85	Indivirus	35.7	1.5e-28
>prophage 95
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1100676	1103895	1919901		Mycoplasma_phage(33.33%)	3	NA	NA
WP_050949025.1|1100676_1101726_+	ferric ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	38.7	3.7e-19
WP_050949026.1|1101814_1103131_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	81.9	2.0e-184
WP_050949027.1|1103364_1103895_+	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	36.9	4.9e-20
>prophage 96
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1111101	1115509	1919901	tRNA	Pandoravirus(50.0%)	3	NA	NA
WP_050949038.1|1111101_1111872_-|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	A0A291ATS8	Pandoravirus	27.7	6.6e-18
WP_050949034.1|1111871_1112981_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_050949035.1|1113373_1115509_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	W6LLI2	Streptococcus_phage	29.5	7.4e-19
>prophage 97
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1132483	1134434	1919901		Ostreococcus_lucimarinus_virus(50.0%)	2	NA	NA
WP_050948961.1|1132483_1133572_+	3-dehydroquinate synthase	NA	E5ERI4	Ostreococcus_lucimarinus_virus	32.5	5.5e-26
WP_050847669.1|1133573_1134434_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A1S6L1V5	Vibrio_phage	45.4	2.3e-59
>prophage 98
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1145214	1155219	1919901		uncultured_virus(33.33%)	6	NA	NA
WP_050948971.1|1145214_1148007_-	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	30.6	3.2e-70
WP_044331090.1|1148156_1148459_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_050948972.1|1148776_1149340_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_050948973.1|1149468_1152039_+	ATP-dependent chaperone ClpB	NA	K4FB40	Cronobacter_phage	37.9	9.3e-125
WP_050948974.1|1152075_1152816_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_050948975.1|1152870_1155219_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	35.3	5.1e-69
>prophage 99
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1159805	1166244	1919901		uncultured_Caudovirales_phage(33.33%)	4	NA	NA
WP_050948982.1|1159805_1161008_+	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	46.4	2.7e-82
WP_050948977.1|1161134_1162625_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050948978.1|1163096_1164668_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	30.6	2.5e-19
WP_050948979.1|1164777_1166244_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.1	3.6e-97
>prophage 100
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1183165	1184014	1919901		Enterococcus_phage(100.0%)	1	NA	NA
WP_042600580.1|1183165_1184014_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.3	1.0e-32
>prophage 101
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1191418	1194190	1919901		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_114934797.1|1191418_1194190_+	RNA polymerase-associated protein RapA	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	39.5	3.9e-20
>prophage 102
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1198093	1199131	1919901		Planktothrix_phage(100.0%)	1	NA	NA
WP_050848923.1|1198093_1199131_-	methionine ABC transporter ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	39.1	2.6e-33
>prophage 103
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1206333	1208130	1919901		Hokovirus(100.0%)	1	NA	NA
WP_050949285.1|1206333_1208130_+	response regulator	NA	A0A1V0SGX0	Hokovirus	31.5	2.1e-38
>prophage 104
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1212340	1224441	1919901		Wolbachia_phage(20.0%)	8	NA	NA
WP_050949286.1|1212340_1212505_-	DNA-binding protein	NA	Q9JMN3	Wolbachia_phage	38.5	8.8e-05
WP_050949287.1|1212586_1213810_-	restriction endonuclease subunit S	NA	A0A1V0SLK8	Klosneuvirus	26.0	6.0e-13
WP_050949384.1|1216159_1218199_-	oligopeptidase A	NA	A0A1V0SD92	Indivirus	24.8	4.6e-50
WP_050949289.1|1218325_1218688_+	YbaN family protein	NA	NA	NA	NA	NA
WP_050949290.1|1218680_1220225_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_050847160.1|1220541_1221192_-	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	44.3	6.5e-43
WP_050949291.1|1221261_1221987_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_050949292.1|1222317_1224441_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A2I7QNQ7	Vibrio_phage	62.4	5.8e-258
>prophage 105
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1232802	1243529	1919901	tRNA	Bacillus_phage(40.0%)	8	NA	NA
WP_061671329.1|1232802_1234704_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	31.4	1.2e-68
WP_050949298.1|1234704_1236003_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0N6W8I1	Bacillus_phage	24.2	2.8e-13
WP_050949299.1|1236010_1236487_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_050949300.1|1236562_1237045_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_050949301.1|1237054_1238413_-	polynucleotide adenylyltransferase PcnB	NA	G3MAR3	Bacillus_virus	35.7	5.6e-28
WP_005652560.1|1238661_1239099_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_114934799.1|1239358_1241725_+	DNA internalization-related competence protein ComEC/Rec2	NA	Q332B9	Clostridium_botulinum_C_phage	30.7	1.0e-21
WP_050949303.1|1241765_1243529_+	lipid A ABC transporter ATP-binding protein/permease MsbA	NA	W8CYL7	Bacillus_phage	30.6	4.5e-54
>prophage 106
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1247507	1248221	1919901		Moraxella_phage(100.0%)	1	NA	NA
WP_050949304.1|1247507_1248221_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	46.4	2.5e-43
>prophage 107
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1260947	1264259	1919901		uncultured_Caudovirales_phage(50.0%)	4	NA	NA
WP_005649826.1|1260947_1261610_+	BAX inhibitor protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	54.4	1.1e-32
WP_050949312.1|1261669_1262734_+	TIGR01620 family protein	NA	NA	NA	NA	NA
WP_050949313.1|1262733_1263408_+	TIGR01621 family pseudouridine synthase	NA	NA	NA	NA	NA
WP_050949314.1|1263455_1264259_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	28.2	2.2e-16
>prophage 108
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1267906	1269685	1919901		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_032824216.1|1267906_1269685_-	ABC transporter ATP-binding protein/permease	NA	F2Y1V6	Organic_Lake_phycodnavirus	24.9	1.3e-05
>prophage 109
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1275633	1277694	1919901		Synechococcus_phage(50.0%)	2	NA	NA
WP_050949316.1|1275633_1276497_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	50.0	1.0e-14
WP_050949317.1|1276512_1277694_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	48.4	4.3e-93
>prophage 110
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1288718	1293725	1919901		Equid_alphaherpesvirus(25.0%)	5	NA	NA
WP_050949324.1|1288718_1289378_-	uracil-DNA glycosylase	NA	A0A0A7D988	Equid_alphaherpesvirus	48.4	9.9e-55
WP_005628746.1|1289632_1290016_+	autonomous glycyl radical cofactor GrcA	NA	A0A1W5N098	Cronobacter_phage	67.0	4.9e-30
WP_050847202.1|1290185_1291982_+	elongation factor 4	NA	A0A2K9L2P9	Tupanvirus	42.6	6.5e-24
WP_050949325.1|1291990_1293040_+	signal peptidase I	NA	NA	NA	NA	NA
WP_032824232.1|1293041_1293725_+	ribonuclease III	NA	M4QMG4	Micromonas_pusilla_virus	35.6	1.6e-23
>prophage 111
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1325195	1327299	1919901		Thermobifida_phage(50.0%)	3	NA	NA
WP_050949347.1|1325195_1326059_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	27.1	4.5e-07
WP_032824651.1|1326076_1326571_-	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA	NA
WP_005670728.1|1326573_1327299_-	LPS export ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	31.3	2.4e-25
>prophage 112
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1332926	1338137	1919901		Bacillus_phage(50.0%)	4	NA	NA
WP_114934802.1|1332926_1333394_-	anaerobic ribonucleoside-triphosphate reductase-activating protein	NA	A0A2H5BH04	Vibrio_virus	56.5	1.5e-49
WP_050949350.1|1333631_1335359_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	W8CYL7	Bacillus_phage	25.2	3.4e-22
WP_061671336.1|1335358_1337119_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	NA	W8CYL7	Bacillus_phage	23.3	5.7e-25
WP_005627209.1|1337180_1338137_-	thioredoxin-disulfide reductase	NA	A0A1V0SIN1	Klosneuvirus	40.9	4.3e-59
>prophage 113
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1346291	1351457	1919901		Faustovirus(33.33%)	6	NA	NA
WP_050949358.1|1346291_1347392_-	histidinol-phosphate transaminase	NA	A0A142C026	Faustovirus	26.9	1.5e-18
WP_050949359.1|1347481_1348570_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	46.4	6.8e-85
WP_050837723.1|1348760_1349105_+	DUF496 family protein	NA	NA	NA	NA	NA
WP_050949360.1|1349144_1349711_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050949361.1|1349850_1350843_-	aminodeoxychorismate synthase component I	NA	NA	NA	NA	NA
WP_050949362.1|1350884_1351457_+	anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	34.5	1.5e-27
>prophage 114
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1355574	1371201	1919901		Bacillus_virus(28.57%)	14	NA	NA
WP_021035448.1|1355574_1356645_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.6	7.0e-26
WP_061671338.1|1356679_1357360_-	D-alanyl-D-alanine carboxypeptidase family protein	NA	NA	NA	NA	NA
WP_114934803.1|1357361_1358495_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_050847244.1|1358522_1358867_-	ArsC family reductase	NA	NA	NA	NA	NA
WP_050949365.1|1359233_1361114_-	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	36.6	2.9e-115
WP_050949366.1|1361235_1362297_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_050949367.1|1362559_1364734_+	DNA helicase II	NA	A7KV33	Bacillus_phage	37.3	8.7e-116
WP_050949386.1|1364826_1365828_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_076773390.1|1365842_1366730_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_044330457.1|1366739_1367732_+	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.5	7.5e-14
WP_061671340.1|1367734_1368718_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.2	8.2e-21
WP_050949388.1|1368746_1369553_-	DNA ligase	NA	A0A1X9VNU1	Mimivirus	29.8	1.9e-28
WP_050949369.1|1369758_1370343_+	D-sedoheptulose 7-phosphate isomerase	NA	NA	NA	NA	NA
WP_014550906.1|1370469_1371201_+	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	38.1	1.6e-29
>prophage 115
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1375022	1447686	1919901	protease,portal,tail,head,capsid,terminase	Mannheimia_phage(28.57%)	56	NA	NA
WP_050949374.1|1375022_1375538_-|protease	SprT family zinc-dependent metalloprotease	protease	NA	NA	NA	NA
WP_050949375.1|1375825_1376980_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	63.0	1.5e-127
WP_050949376.1|1377490_1377955_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_162790746.1|1377973_1378759_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_162790740.1|1378795_1380595_-	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	26.0	5.6e-44
WP_114934807.1|1380788_1381808_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_021035427.1|1382058_1382685_+	guanylate kinase	NA	K4JYM5	Abalone_herpesvirus	35.6	7.5e-20
WP_050848773.1|1382747_1383014_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_114934808.1|1383305_1385420_+	bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	38.8	2.5e-11
WP_061671345.1|1385416_1387498_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_061671346.1|1387527_1388337_+	glutamate racemase	NA	NA	NA	NA	NA
WP_050949383.1|1388547_1389693_+	FMN-dependent L-lactate dehydrogenase LldD	NA	NA	NA	NA	NA
WP_050949451.1|1395482_1396412_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_050949450.1|1396421_1397141_+	azaleucine resistance protein AzlC	NA	NA	NA	NA	NA
WP_005670246.1|1397137_1397467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050949449.1|1397569_1397803_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050847486.1|1397878_1399459_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	26.1	3.3e-32
WP_005667099.1|1399689_1400478_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_112101967.1|1400557_1402537_+	exoribonuclease II	NA	Q0GXV6	Lactococcus_phage	25.3	1.1e-24
WP_114934809.1|1402902_1408377_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050949447.1|1408613_1409255_+	5-oxoprolinase subunit PxpB	NA	NA	NA	NA	NA
WP_050949446.1|1409251_1410181_+	5-oxoprolinase/urea amidolyase family protein	NA	NA	NA	NA	NA
WP_077643925.1|1410167_1410905_+	5-oxoprolinase subunit PxpA	NA	NA	NA	NA	NA
WP_021035413.1|1410948_1412142_+	divalent metal cation transporter	NA	NA	NA	NA	NA
WP_105880424.1|1412222_1413557_-	argininosuccinate synthase	NA	A0A140XAJ5	Dickeya_phage	79.4	2.2e-53
WP_050949443.1|1413733_1414606_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	35.7	4.3e-50
WP_050949442.1|1414771_1417120_-	penicillin-binding protein 1B	NA	NA	NA	NA	NA
WP_021035409.1|1417126_1417480_-	YacL family protein	NA	NA	NA	NA	NA
WP_021035408.1|1417481_1417826_-	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	48.6	1.7e-26
WP_050949441.1|1417961_1418768_+	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_114934810.1|1418860_1421452_+	bifunctional uridylyltransferase/uridylyl-removing protein GlnD	NA	NA	NA	NA	NA
WP_050949439.1|1422240_1423308_+	UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA	NA	NA	NA	NA
WP_050847501.1|1423605_1424154_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	41.2	5.3e-30
WP_050949438.1|1424224_1425265_+	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA	NA
WP_005654341.1|1425422_1425680_+	phosphocarrier protein Hpr	NA	NA	NA	NA	NA
WP_050949437.1|1425759_1427487_+	phosphoenolpyruvate-protein phosphotransferase PtsI	NA	NA	NA	NA	NA
WP_005688036.1|1427546_1428047_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_005689745.1|1428184_1428280_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005688032.1|1428394_1428760_+	YgiW/YdeI family stress tolerance OB fold protein	NA	A0A1I9LJU6	Stx_converting_phage	34.2	5.9e-09
WP_005688031.1|1428823_1429489_+	response regulator	NA	NA	NA	NA	NA
WP_005689743.1|1429485_1430841_+	two-component system sensor histidine kinase QseC	NA	W8CYF6	Bacillus_phage	26.8	2.1e-14
WP_050949436.1|1431106_1433134_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.8	1.6e-18
WP_032823616.1|1433170_1434646_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	35.2	2.4e-45
WP_005664886.1|1434752_1435856_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_050949435.1|1435852_1436929_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_050949434.1|1437122_1439393_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_061671239.1|1440040_1441051_-|portal	phage portal protein	portal	Q19UT6	Mannheimia_phage	60.4	6.2e-117
WP_050949432.1|1442916_1443966_+|capsid	phage major capsid protein, P2 family	capsid	Q19UT3	Mannheimia_phage	50.7	1.4e-87
WP_050949431.1|1443977_1444628_+|terminase	terminase	terminase	Q19US0	Mannheimia_phage	45.5	3.5e-44
WP_050949430.1|1444920_1445427_+|head	head completion/stabilization protein	head	A0A0M3LNL8	Mannheimia_phage	51.0	8.1e-33
WP_005653052.1|1445426_1445636_+|tail	tail protein	tail	A0A0M3LPY0	Mannheimia_phage	45.3	4.7e-11
WP_005689816.1|1445637_1445859_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050949429.1|1445851_1446370_+	lysozyme	NA	A0A0M3LPQ1	Mannheimia_phage	47.7	1.5e-37
WP_050949428.1|1446354_1446705_+	chemotaxis protein	NA	NA	NA	NA	NA
WP_162790730.1|1446879_1447113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050949427.1|1447263_1447686_+	phage virion morphogenesis protein	NA	A0A2H4J927	uncultured_Caudovirales_phage	50.9	2.1e-18
>prophage 116
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1458609	1459671	1919901	protease	Bodo_saltans_virus(100.0%)	1	NA	NA
WP_050949073.1|1458609_1459671_-|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	31.7	7.4e-20
>prophage 117
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1462858	1467089	1919901		Dickeya_phage(33.33%)	4	NA	NA
WP_050949076.1|1462858_1463401_-	HAD family hydrolase	NA	A0A140XBD6	Dickeya_phage	42.6	9.0e-22
WP_050949077.1|1463410_1464346_-	KpsF/GutQ family sugar isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	35.5	3.6e-42
WP_050949078.1|1464959_1465631_-	iron-sulfur cluster repair protein YtfE	NA	NA	NA	NA	NA
WP_050949079.1|1466075_1467089_+	GTP 3',8-cyclase MoaA	NA	D5GVS6	Campylobacter_virus	31.5	4.5e-06
>prophage 118
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1473146	1475228	1919901		Moraxella_phage(100.0%)	1	NA	NA
WP_162790741.1|1473146_1475228_+	carboxy terminal-processing peptidase	NA	A0A0R6PIZ1	Moraxella_phage	32.3	7.1e-83
>prophage 119
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1484758	1488626	1919901		Pseudomonas_phage(50.0%)	3	NA	NA
WP_005650087.1|1484758_1485889_-	ribonucleotide-diphosphate reductase subunit beta	NA	G9IAA3	Pseudomonas_phage	78.6	1.6e-169
WP_050848624.1|1486037_1486346_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050949084.1|1486355_1488626_-	ribonucleoside-diphosphate reductase subunit alpha	NA	I3UMG3	Colwellia_phage	67.1	2.1e-301
>prophage 120
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1492273	1500389	1919901	protease,tRNA	Streptococcus_phage(25.0%)	7	NA	NA
WP_050949087.1|1492273_1493125_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.8	2.5e-50
WP_050949088.1|1493226_1494675_+|protease	metalloprotease TldD	protease	NA	NA	NA	NA
WP_114934812.1|1495364_1496366_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	43.3	6.7e-71
WP_006996472.1|1496600_1497410_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_050949090.1|1497502_1498519_-	YeiH family protein	NA	NA	NA	NA	NA
WP_050847548.1|1498515_1499340_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.6	3.8e-11
WP_005657080.1|1499339_1500389_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	22.0	3.8e-08
>prophage 121
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1508270	1511826	1919901		Enterobacteria_phage(50.0%)	3	NA	NA
WP_005686565.1|1508270_1509281_-	HTH-type transcriptional repressor PurR	NA	C6ZCU4	Enterobacteria_phage	32.9	2.6e-38
WP_005647358.1|1509640_1510468_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_111688999.1|1510527_1511826_-	adenylosuccinate synthase	NA	A0A285PX35	Cedratvirus	34.5	1.7e-66
>prophage 122
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1521085	1537789	1919901	tRNA	Organic_Lake_phycodnavirus(14.29%)	15	NA	NA
WP_061671224.1|1521085_1521703_+	energy-coupling factor ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	29.6	3.9e-13
WP_061671223.1|1521929_1523120_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_061671222.1|1523261_1524350_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_050949108.1|1524418_1524913_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	41.1	5.0e-19
WP_050949109.1|1525073_1527683_+	aminopeptidase N	NA	NA	NA	NA	NA
WP_006996444.1|1527750_1528365_-	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	37.3	4.0e-26
WP_050949110.1|1528408_1529803_+	sodium-coupled multidrug efflux MATE transporter HmrM	NA	NA	NA	NA	NA
WP_005647288.1|1529811_1530528_+	DNA/RNA nuclease SfsA	NA	NA	NA	NA	NA
WP_050949111.1|1530728_1531916_+|tRNA	tyrosine--tRNA ligase	tRNA	S4VZK2	Pandoravirus	27.6	1.3e-09
WP_005657007.1|1531998_1532946_-	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	38.1	6.8e-41
WP_162690725.1|1532947_1533901_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_162690726.1|1533900_1534521_-	outer membrane lipoprotein LolB	NA	NA	NA	NA	NA
WP_048954423.1|1534592_1535843_-	multifunctional CCA addition/repair protein	NA	A0A0F6YPT7	Sinorhizobium_phage	47.2	2.4e-94
WP_048954422.1|1535849_1536461_-	SH3 domain-containing protein	NA	NA	NA	NA	NA
WP_021035309.1|1536526_1537789_-	inorganic phosphate transporter	NA	M4QMY4	Ostreococcus_lucimarinus_virus	34.1	4.5e-56
>prophage 123
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1542720	1558614	1919901	tRNA	Vibrio_phage(16.67%)	12	NA	NA
WP_114934817.1|1542720_1544097_+	DNA repair protein RadA	NA	A0A2I7QPS8	Vibrio_phage	26.3	7.9e-06
WP_005653255.1|1544182_1544662_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA	NA
WP_050949115.1|1544663_1547423_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	42.5	1.1e-83
WP_050847573.1|1547440_1548058_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_050949116.1|1548118_1549459_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	39.6	4.3e-81
WP_050949117.1|1549544_1550843_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_050845835.1|1550842_1551679_-	formyltetrahydrofolate deformylase	NA	M4QRX9	Synechococcus_phage	33.6	4.5e-12
WP_050845834.1|1551749_1552154_-	H-NS histone family protein	NA	NA	NA	NA	NA
WP_050949118.1|1552596_1554117_+	Na+/H+ antiporter NhaC family protein	NA	NA	NA	NA	NA
WP_050949119.1|1554383_1556105_+	acetolactate synthase 3 large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	29.0	7.3e-57
WP_005691276.1|1556104_1556596_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_050949120.1|1556880_1558614_-|tRNA	arginine--tRNA ligase	tRNA	A0A2K9L6Z2	Tupanvirus	35.0	3.4e-86
>prophage 124
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1561969	1674024	1919901	protease,transposase,integrase,portal,tRNA,tail,head,capsid,terminase,lysis,holin,plate	Mannheimia_phage(32.94%)	135	1557169:1557187	1639750:1639768
1557169:1557187	attL	CAAAAGTGCGGTCGAATTT	NA	NA	NA	NA
WP_050949122.1|1561969_1563052_-	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	30.4	1.6e-33
WP_050949123.1|1563061_1564468_-	replicative DNA helicase	NA	O80281	Escherichia_phage	68.5	1.5e-169
WP_041175346.1|1564606_1566043_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_114934818.1|1566582_1567836_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1V0E8G8	Vibrio_phage	36.9	2.8e-74
WP_162627466.1|1567832_1568021_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_114934819.1|1568076_1568502_-	hypothetical protein	NA	A0A0E3T9S3	Pseudomonas_phage	37.1	5.8e-16
WP_114934820.1|1568498_1569068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114934821.1|1569169_1569604_-	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	36.2	2.2e-18
WP_114934822.1|1569603_1570248_-	translocation protein TolB precursor	NA	A0A0M3LP90	Mannheimia_phage	71.0	1.3e-83
WP_114934823.1|1570476_1570767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114934824.1|1570854_1571535_-	hypothetical protein	NA	A0A0M3LR56	Mannheimia_phage	54.1	1.3e-62
WP_112111519.1|1571779_1572691_-	recombinase	NA	A0A0M3LNU3	Mannheimia_phage	71.1	1.1e-115
WP_114934825.1|1572703_1572997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114934826.1|1572996_1573299_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114934827.1|1573766_1574423_-	hypothetical protein	NA	D0UIM5	Aggregatibacter_phage	56.6	2.7e-60
WP_044332619.1|1574682_1574937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114877407.1|1575532_1576057_+	hypothetical protein	NA	Q7Y5W8	Haemophilus_phage	60.7	8.4e-49
WP_162790742.1|1576419_1576959_-	hypothetical protein	NA	S5FXQ0	Shigella_phage	32.0	1.9e-08
WP_114934829.1|1576972_1577938_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114934830.1|1577994_1578693_-	helix-turn-helix domain-containing protein	NA	Q7Y5W5	Haemophilus_phage	86.6	9.0e-115
WP_005679233.1|1578803_1578992_+	Cro protein	NA	Q7Y5W4	Haemophilus_phage	93.5	8.5e-28
WP_114934831.1|1579040_1579481_+	hypothetical protein	NA	K7PJS5	Enterobacterial_phage	31.5	5.6e-14
WP_048952997.1|1579548_1579779_+	hypothetical protein	NA	A0A088FAW9	Sulfitobacter_phage	48.5	1.3e-09
WP_162790435.1|1579780_1579939_+	hypothetical protein	NA	NA	NA	NA	NA
WP_114934832.1|1580669_1582043_+	AAA family ATPase	NA	A0A0M3LQC0	Mannheimia_phage	51.0	1.8e-122
WP_114934833.1|1582039_1582264_+	hypothetical protein	NA	A0A0M3LR43	Mannheimia_phage	49.3	7.8e-12
WP_105872417.1|1582300_1582717_+	recombination protein NinB	NA	Q7Y5V7	Haemophilus_phage	85.4	9.6e-64
WP_114934834.1|1582809_1583352_+	recombination protein NinG	NA	D0UIK8	Aggregatibacter_phage	70.1	4.4e-61
WP_114934835.1|1583348_1583720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_114934836.1|1583769_1584735_-	hypothetical protein	NA	Q8HA04	Enterobacteria_phage	58.8	1.2e-88
WP_114934837.1|1585103_1585778_+	hypothetical protein	NA	D0UIK6	Aggregatibacter_phage	47.3	2.6e-58
WP_101160772.1|1586100_1586307_+	hypothetical protein	NA	NA	NA	NA	NA
WP_101160776.1|1586284_1586764_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032827954.1|1586868_1587228_+|holin	phage holin, lambda family	holin	NA	NA	NA	NA
WP_112072224.1|1587193_1587796_+	glycoside hydrolase family 19 protein	NA	Q7Y5V0	Haemophilus_phage	55.4	3.0e-58
WP_101160782.1|1587788_1588112_+	DUF2570 family protein	NA	Q7Y5U9	Haemophilus_phage	60.7	5.7e-24
WP_112072223.1|1588023_1588305_+	hypothetical protein	NA	Q776X1	Haemophilus_phage	71.1	2.3e-29
WP_114877436.1|1588615_1589077_+	DUF1441 family protein	NA	NA	NA	NA	NA
WP_061671374.1|1590124_1590829_-	helix-turn-helix transcriptional regulator	NA	A0A0R6PH50	Moraxella_phage	28.8	1.2e-10
WP_061671373.1|1591068_1591335_+	DNA-binding protein	NA	F6MII4	Haemophilus_phage	51.2	2.3e-15
WP_114934838.1|1591380_1593360_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A0M3LPN5	Mannheimia_phage	54.4	7.7e-196
WP_061671371.1|1593363_1593570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061671370.1|1593566_1594442_+	AAA family ATPase	NA	A0A0M3LP72	Mannheimia_phage	56.7	3.5e-84
WP_061671369.1|1594458_1594671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061671368.1|1594680_1594872_+	hypothetical protein	NA	F6MII8	Haemophilus_phage	57.4	1.1e-11
WP_061671367.1|1594874_1595492_+	DUF3164 family protein	NA	A0A0M3LQ92	Mannheimia_phage	60.1	9.5e-68
WP_061671366.1|1595600_1595810_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_061671365.1|1595963_1596245_+	hypothetical protein	NA	S4TQS8	Salmonella_phage	42.0	4.1e-10
WP_061671389.1|1596414_1596789_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061671364.1|1596800_1597133_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061671363.1|1597125_1597368_+	DUF551 domain-containing protein	NA	NA	NA	NA	NA
WP_061671362.1|1597377_1597674_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061671361.1|1597786_1598161_+	hypothetical protein	NA	F6MIJ4	Haemophilus_phage	50.8	1.4e-29
WP_061671360.1|1598164_1598476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061671359.1|1598582_1599134_+	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	53.3	8.0e-50
WP_061671358.1|1599114_1599531_+	regulatory protein GemA	NA	A0A0M3LP80	Mannheimia_phage	51.1	4.6e-26
WP_061671357.1|1599597_1599942_+	hypothetical protein	NA	A0A0M3LQH8	Mannheimia_phage	42.6	1.1e-20
WP_061671356.1|1600451_1600670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061671355.1|1600783_1601209_+	mor transcription activator family protein	NA	F6MIJ8	Haemophilus_phage	49.6	8.9e-33
WP_061671354.1|1601304_1601808_+	glycoside hydrolase family 108 protein	NA	A0A0M3LSH2	Mannheimia_phage	66.2	1.7e-59
WP_061671353.1|1601976_1602270_+	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	67.2	1.5e-15
WP_061671352.1|1602278_1602530_+	DUF2681 domain-containing protein	NA	NA	NA	NA	NA
WP_061671388.1|1602643_1602898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061671351.1|1602897_1603164_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061671350.1|1603166_1603667_+	DUF1804 family protein	NA	F6MIK6	Haemophilus_phage	53.0	9.2e-45
WP_061671349.1|1603813_1605469_+|terminase	phage terminase large subunit	terminase	A0A0M3LQB7	Mannheimia_phage	84.2	1.8e-275
WP_114934839.1|1605480_1607121_+	DUF935 domain-containing protein	NA	B7SDN1	Haemophilus_phage	66.7	6.6e-201
WP_114934731.1|1607107_1608385_+|capsid	minor capsid protein	capsid	B7SDN5	Haemophilus_phage	52.4	1.1e-121
WP_111689168.1|1608495_1608981_+	phage virion morphogenesis protein	NA	B7SDN8	Haemophilus_phage	50.3	1.3e-32
WP_061671415.1|1609232_1610270_+	I protein	NA	B7SDN9	Haemophilus_phage	46.7	1.4e-68
WP_061671414.1|1610269_1611193_+|head	head protein	head	B7SDP1	Haemophilus_phage	74.6	3.0e-134
WP_061723907.1|1611256_1611562_+	hypothetical protein	NA	B7SDP3	Haemophilus_phage	55.7	3.3e-21
WP_114934840.1|1611571_1612003_+	DUF1320 domain-containing protein	NA	B7SDP4	Haemophilus_phage	61.4	9.3e-38
WP_114934841.1|1611986_1612631_+	DUF1834 family protein	NA	A0A0M3LQJ7	Mannheimia_phage	44.4	1.0e-43
WP_076773766.1|1612627_1612804_+	DUF2635 domain-containing protein	NA	A0A0M3LQM9	Mannheimia_phage	70.4	8.5e-14
WP_061671410.1|1612796_1614206_+|tail	phage tail protein	tail	A0A0M3LQC3	Mannheimia_phage	65.7	4.1e-159
WP_061671409.1|1614215_1614584_+|tail	phage tail protein	tail	A0A0M3LRV6	Mannheimia_phage	56.5	7.5e-28
WP_061671408.1|1614583_1614931_+	hypothetical protein	NA	A0A0M3LSI2	Mannheimia_phage	49.2	2.4e-20
WP_061671406.1|1615208_1617479_+|tail	phage tail tape measure protein	tail	A0A0M3LPB6	Mannheimia_phage	47.4	4.3e-150
WP_061671405.1|1617481_1618870_+	phage morphogenesis protein	NA	F6MIL2	Haemophilus_phage	42.0	1.9e-100
WP_061671404.1|1618853_1619987_+|tail	phage tail protein	tail	A0A0M3LPS4	Mannheimia_phage	70.4	3.3e-143
WP_061671403.1|1619988_1620624_+|plate	phage baseplate assembly protein V	plate	A0A0M3LPA3	Mannheimia_phage	61.3	1.1e-63
WP_061671420.1|1620693_1621044_+	hypothetical protein	NA	A0A0M3LQK5	Mannheimia_phage	75.9	3.8e-45
WP_061832746.1|1621058_1622123_+|plate	baseplate J/gp47 family protein	plate	F6MIL6	Haemophilus_phage	65.7	3.3e-124
WP_061671401.1|1622122_1622701_+	DUF2313 domain-containing protein	NA	F6MIL7	Haemophilus_phage	70.9	8.3e-74
WP_114934842.1|1622713_1624312_+|tail	tail fiber protein	tail	F6MIL8	Haemophilus_phage	27.3	1.2e-13
WP_061671399.1|1624900_1625389_+	hypothetical protein	NA	F6MIM0	Haemophilus_phage	56.5	8.3e-51
WP_114934843.1|1625393_1625813_+	hypothetical protein	NA	B7SDP6	Haemophilus_phage	45.8	2.4e-14
WP_112072221.1|1627433_1627952_+	hypothetical protein	NA	A0A1B1P9D9	Acinetobacter_phage	37.9	9.2e-24
WP_015701513.1|1627990_1628212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_114934844.1|1628215_1629718_+|portal	phage portal protein	portal	K7PJP3	Enterobacteria_phage	59.3	1.2e-159
WP_154017416.1|1629791_1629938_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041175036.1|1629940_1631917_+|protease	Clp protease ClpP	protease	A0A1W6JT88	Pseudomonas_phage	57.1	2.4e-197
WP_015701510.1|1631995_1632319_+	DUF2190 family protein	NA	NA	NA	NA	NA
WP_015701509.1|1632299_1632611_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015701508.1|1632613_1633144_+|tail	tail protein	tail	K7PKQ5	Enterobacteria_phage	50.0	2.7e-18
WP_112072217.1|1633152_1633563_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_114934845.1|1633565_1634216_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038440705.1|1634490_1634898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_114934846.1|1634942_1635167_+	DUF4035 domain-containing protein	NA	NA	NA	NA	NA
WP_015701504.1|1635235_1635619_+	diaminopimelate decarboxylase	NA	NA	NA	NA	NA
WP_005651224.1|1635602_1635905_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_114934847.1|1635917_1636157_+	hypothetical protein	NA	NA	NA	NA	NA
WP_114934848.1|1636208_1639580_+	tape measure protein	NA	A0A1C6ZDP8	Pseudomonas_phage	48.1	5.6e-45
WP_038440713.1|1639588_1639921_+|tail	phage tail protein	tail	H6WZM2	Escherichia_phage	38.5	2.7e-16
1639750:1639768	attR	CAAAAGTGCGGTCGAATTT	NA	NA	NA	NA
WP_042594865.1|1640419_1640959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080349558.1|1641666_1641885_+	DUF1902 domain-containing protein	NA	A0A0M4R2Z9	Salmonella_phage	40.4	8.1e-06
WP_046949806.1|1641887_1642085_+	type II toxin-antitoxin system HicA family toxin	NA	A0A0M4RCZ9	Salmonella_phage	64.6	6.4e-18
WP_114934849.1|1642569_1643448_+	phage repressor protein/antirepressor Ant	NA	D0UIK6	Aggregatibacter_phage	77.7	4.0e-128
WP_114934850.1|1644163_1644877_+|tail	phage minor tail protein L	tail	A0A0M3LSQ5	Mannheimia_phage	60.1	1.9e-80
WP_114934851.1|1644879_1645629_+	C40 family peptidase	NA	A0A0M3LQI5	Mannheimia_phage	58.6	1.5e-78
WP_112072211.1|1645565_1646180_+|tail	tail assembly protein	tail	A0A0M3LPS1	Mannheimia_phage	53.6	3.9e-53
WP_162790747.1|1647622_1650469_+	DUF1983 domain-containing protein	NA	A0A0M3LQG1	Mannheimia_phage	60.8	3.9e-15
WP_138171925.1|1650495_1650885_+	hypothetical protein	NA	A0A0M3LS02	Mannheimia_phage	30.9	7.0e-08
WP_112072209.1|1650884_1651481_+	hypothetical protein	NA	A0A0M3LR33	Mannheimia_phage	43.9	3.6e-40
WP_112072208.1|1651491_1651830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061671219.1|1652029_1655209_-	type I restriction endonuclease subunit R	NA	A0A220A398	Liberibacter_phage	28.2	1.1e-79
WP_050949126.1|1655750_1657037_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_105880414.1|1657029_1658697_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	30.1	1.0e-47
WP_114934853.1|1658862_1659249_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_050949127.1|1659248_1660169_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_050949129.1|1660257_1661382_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_050949131.1|1661416_1662256_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	40.4	1.9e-42
WP_050949133.1|1662382_1663168_-	Zn-ribbon-containing protein	NA	NA	NA	NA	NA
WP_050949134.1|1663158_1663539_-	SufE family protein	NA	NA	NA	NA	NA
WP_114934854.1|1663535_1664735_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	31.8	1.9e-59
WP_050949138.1|1664724_1665231_-	thermonuclease family protein	NA	A0A0R6PHV6	Moraxella_phage	47.8	4.2e-29
WP_038439755.1|1665345_1665768_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_005652869.1|1665785_1666481_+|lysis	CidB/LrgB family autolysis modulator	lysis	NA	NA	NA	NA
WP_050949140.1|1666603_1667959_+	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA	NA
WP_050949142.1|1668052_1669996_+	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	30.0	7.2e-53
WP_162790743.1|1670079_1671162_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_050949143.1|1671291_1672062_-	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA	NA
WP_041175343.1|1672061_1672922_-	spermidine/putrescine ABC transporter permease PotB	NA	Q6GZ02	Mycoplasma_phage	28.6	1.5e-15
WP_050949144.1|1672905_1674024_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	NA	Q6GZ03	Mycoplasma_phage	36.6	1.9e-29
>prophage 125
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1692472	1693129	1919901		Cellulophaga_phage(100.0%)	1	NA	NA
WP_005688422.1|1692472_1693129_+	GTP cyclohydrolase I FolE	NA	M1Q6X8	Cellulophaga_phage	49.8	7.8e-52
>prophage 126
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1697381	1697834	1919901	protease	Pseudomonas_phage(100.0%)	1	NA	NA
WP_050949157.1|1697381_1697834_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	56.1	2.5e-25
>prophage 127
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1703894	1704113	1919901		Lactococcus_phage(100.0%)	1	NA	NA
WP_021035241.1|1703894_1704113_+	cold shock domain-containing protein CspD	NA	Q9AZD3	Lactococcus_phage	53.1	2.2e-11
>prophage 128
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1712722	1716944	1919901	protease	Micromonas_pusilla_virus(33.33%)	3	NA	NA
WP_038441262.1|1712722_1714630_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	42.5	5.0e-115
WP_038441260.1|1714741_1715569_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	27.5	1.4e-13
WP_050847626.1|1715606_1716944_+	phosphoglucosamine mutase	NA	A0A127AWJ1	Bacillus_phage	23.4	2.9e-13
>prophage 129
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1720397	1722065	1919901	tRNA	Escherichia_phage(100.0%)	1	NA	NA
WP_050949171.1|1720397_1722065_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	77.2	5.3e-254
>prophage 130
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1732196	1734662	1919901		Dickeya_phage(100.0%)	1	NA	NA
WP_114934861.1|1732196_1734662_+	glycogen/starch/alpha-glucan phosphorylase	NA	A0A140XAG6	Dickeya_phage	53.0	1.6e-17
>prophage 131
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1743644	1760057	1919901	tRNA	Acinetobacter_phage(37.5%)	16	NA	NA
WP_114934863.1|1743644_1746509_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.4	1.8e-148
WP_114934864.1|1746543_1746825_-	hydrogenase maturation factor HybG	NA	NA	NA	NA	NA
WP_050949189.1|1746955_1748386_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	NA	A0A0P0IR83	Acinetobacter_phage	38.3	5.5e-34
WP_050949190.1|1748416_1749418_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	37.1	9.4e-49
WP_050949191.1|1749470_1749857_-	tautomerase family protein	NA	NA	NA	NA	NA
WP_050949192.1|1749905_1750487_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	39.4	2.9e-34
WP_050949193.1|1750499_1752056_-	anthranilate synthase component I	NA	A0A0B5J984	Pandoravirus	33.2	4.7e-23
WP_050949194.1|1752438_1752936_-	non-heme ferritin	NA	NA	NA	NA	NA
WP_041175333.1|1752951_1753440_-	non-heme ferritin	NA	NA	NA	NA	NA
WP_050949195.1|1754000_1754228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050949196.1|1754338_1755358_+	phosphate ABC transporter substrate-binding protein PstS	NA	A0A222YW41	Synechococcus_phage	40.1	5.4e-52
WP_114934865.1|1755448_1756396_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_021035193.1|1756397_1757246_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_021035192.1|1757255_1758023_+	phosphate ABC transporter ATP-binding protein PstB	NA	G3M9Y6	Bacillus_virus	30.5	7.3e-17
WP_050847118.1|1758099_1758795_+	phosphate regulon transcriptional regulatory protein PhoB	NA	NA	NA	NA	NA
WP_050949198.1|1758791_1760057_+	phosphate regulon sensor histidine kinase PhoR	NA	W8CYF6	Bacillus_phage	31.0	1.6e-24
>prophage 132
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1771130	1772403	1919901	tRNA	Escherichia_phage(50.0%)	2	NA	NA
WP_114934869.1|1771130_1772072_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	83.5	2.4e-123
WP_053465028.1|1772073_1772403_+	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	52.8	6.9e-25
>prophage 133
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1778359	1783832	1919901	tRNA	Tupanvirus(50.0%)	3	NA	NA
WP_114934872.1|1778359_1780291_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	38.6	1.3e-131
WP_050847130.1|1780575_1781160_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
WP_114934873.1|1781225_1783832_-	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	34.4	2.4e-88
>prophage 134
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1790716	1792444	1919901		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_061671202.1|1790716_1791355_-	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	40.0	2.0e-28
WP_061671201.1|1791409_1792444_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	46.0	1.1e-73
>prophage 135
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1797367	1804403	1919901		Virus_Rctr197k(33.33%)	5	NA	NA
WP_050949217.1|1797367_1799290_-	exodeoxyribonuclease V subunit alpha	NA	A0A1P8DII4	Virus_Rctr197k	26.0	3.9e-19
WP_050949218.1|1799289_1802925_-	exodeoxyribonuclease V subunit beta	NA	A0A1V0SG90	Hokovirus	36.1	7.7e-08
WP_005596075.1|1803033_1803387_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_005596065.1|1803452_1803650_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_075564409.1|1803860_1804403_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.9	1.4e-14
>prophage 136
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1808964	1809219	1919901	transposase	Burkholderia_phage(100.0%)	1	NA	NA
WP_005662443.1|1808964_1809219_-|transposase	IS3 family transposase	transposase	A9YX41	Burkholderia_phage	47.1	2.0e-08
>prophage 137
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1812860	1823921	1919901	tRNA	Staphylococcus_phage(14.29%)	12	NA	NA
WP_005662456.1|1812860_1813142_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	42.7	2.5e-07
WP_114934874.1|1813526_1814372_-	NAD-dependent deacetylase	NA	NA	NA	NA	NA
WP_050949223.1|1814368_1814569_-	cell division protein FtsK	NA	NA	NA	NA	NA
WP_050847951.1|1814789_1815794_+	cytochrome c	NA	Q9JMN3	Wolbachia_phage	37.8	1.2e-19
WP_050949224.1|1815842_1816553_-	NAD-dependent deacylase	NA	R9TG77	Vibrio_phage	37.6	8.5e-28
WP_005662473.1|1817493_1818447_-	WYL domain-containing transcriptional regulator	NA	NA	NA	NA	NA
WP_050949225.1|1818511_1818997_-	endopeptidase	NA	A0A2H5BM69	Streptomyces_phage	40.2	7.8e-17
WP_042602652.1|1819049_1819340_-	integration host factor subunit alpha	NA	Q2A099	Sodalis_phage	38.2	1.9e-10
WP_050949226.1|1819341_1821729_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_021035163.1|1821762_1822752_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.0	5.5e-33
WP_050949227.1|1822901_1823627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050949228.1|1823672_1823921_+	2Fe-2S ferredoxin-like protein	NA	G9IAA2	Pseudomonas_phage	49.4	4.6e-13
>prophage 138
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1827352	1845623	1919901	tRNA	Synechococcus_phage(22.22%)	13	NA	NA
WP_050949234.1|1827352_1827826_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	45.4	3.0e-29
WP_050949235.1|1828052_1829456_+|tRNA	asparagine--tRNA ligase	tRNA	A0A1V0SDB6	Indivirus	39.7	1.7e-83
WP_050949236.1|1829531_1830227_+	carbonate dehydratase	NA	NA	NA	NA	NA
WP_050949237.1|1831304_1833839_-	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	26.2	2.3e-27
WP_021035153.1|1833850_1835341_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_050949238.1|1835357_1835813_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_061671200.1|1836297_1837728_-	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	NA	E3SJ88	Synechococcus_phage	43.8	1.2e-20
WP_050949240.1|1837824_1838760_+	LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee	NA	A0A1W6JP29	Morganella_phage	38.0	7.2e-51
WP_050949241.1|1838832_1840731_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	36.3	1.9e-98
WP_050949242.1|1840797_1843041_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	36.0	3.7e-85
WP_015702357.1|1843082_1844297_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_050949243.1|1844334_1845243_-	RimK family alpha-L-glutamate ligase	NA	A0A1D7SA11	Synechococcus_phage	30.7	1.2e-34
WP_005650929.1|1845359_1845623_+	glutaredoxin, GrxA family	NA	A0A2I7SAE2	Vibrio_phage	71.4	3.2e-25
>prophage 139
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1851716	1854399	1919901	holin	Indivirus(50.0%)	2	NA	NA
WP_050949247.1|1851716_1852514_+|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	51.1	2.1e-06
WP_050949248.1|1852551_1854399_-	signal peptide peptidase SppA	NA	A0A2I6UG67	Salinibacter_virus	28.4	3.9e-16
>prophage 140
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1858427	1861666	1919901		Edwardsiella_phage(50.0%)	3	NA	NA
WP_050949254.1|1858427_1859516_-	3-deoxy-7-phosphoheptulonate synthase AroG	NA	A0A0B6VT43	Edwardsiella_phage	46.0	5.0e-80
WP_050949277.1|1859732_1860983_-	lipoprotein-releasing ABC transporter permease subunit LolE	NA	NA	NA	NA	NA
WP_005693575.1|1860982_1861666_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	40.1	5.6e-37
>prophage 141
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1867466	1877187	1919901		Brazilian_cedratvirus(20.0%)	9	NA	NA
WP_114934879.1|1867466_1868414_-	2-hydroxyacid dehydrogenase	NA	A0A2R8FDS8	Brazilian_cedratvirus	31.5	2.3e-28
WP_114934880.1|1868472_1869327_-	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	39.7	7.5e-47
WP_114934881.1|1869341_1870145_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_112082867.1|1870144_1871023_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_050847987.1|1871022_1871463_-	RDD family protein	NA	NA	NA	NA	NA
WP_038440253.1|1871520_1872603_-	peptide chain release factor 1	NA	G0YKC3	Acinetobacter_phage	52.8	6.2e-06
WP_048946941.1|1873266_1874907_-	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.8	4.8e-50
WP_114934882.1|1875550_1876087_-	elongation factor P hydroxylase	NA	NA	NA	NA	NA
WP_114934883.1|1876119_1877187_-	DNA polymerase IV	NA	A0A1B0RXA7	Streptococcus_phage	25.2	8.3e-11
>prophage 142
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1880731	1881394	1919901		Vibrio_phage(100.0%)	1	NA	NA
WP_080358487.1|1880731_1881394_+	transcriptional regulator	NA	M4MB93	Vibrio_phage	34.7	4.8e-25
>prophage 143
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1886906	1890614	1919901		Escherichia_phage(100.0%)	4	NA	NA
WP_050949271.1|1886906_1887539_-	aldolase	NA	A0A077SK32	Escherichia_phage	60.5	1.8e-66
WP_050949272.1|1887535_1888777_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	54.1	2.1e-114
WP_015702001.1|1888779_1889685_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	69.1	3.8e-105
WP_041175318.1|1889855_1890614_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	51.0	3.5e-64
>prophage 144
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1899439	1900495	1919901		Planktothrix_phage(100.0%)	1	NA	NA
WP_050948446.1|1899439_1900495_-	molybdenum ABC transporter ATP-binding protein ModC	NA	G9BWD6	Planktothrix_phage	33.3	4.2e-23
>prophage 145
NZ_CP031249	Haemophilus influenzae strain M15895 chromosome, complete genome	1919901	1912448	1916230	1919901	tRNA	Indivirus(50.0%)	3	NA	NA
WP_050948460.1|1912448_1914497_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	29.7	7.5e-61
WP_050948461.1|1914609_1915470_+	SAM-dependent methyltransferase TehB	NA	NA	NA	NA	NA
WP_050948462.1|1915513_1916230_-	hydroxyacylglutathione hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	26.8	8.3e-07
