assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003345315.1_ASM334531v1	NZ_CP031098	Clostridium botulinum strain CFSAN034202 chromosome, complete genome	1	450771-451062	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,RT,cas3,WYL,csa3,DinG	Orphan	GTTGAACAATAACATGAGATGTATTTAAAT,GTTGAACAATAACATGAGATGTATTTAAAT,GTTGAACAATAACATGAGATGTATTTAAAT	30,30,30	0	0	NA	NA	III-B:III-B:III-B	4,4,4	4	Orphan	DEDDh,RT,cas3,WYL,csa3,DinG	NA|300aa|up_3|NZ_CP031098.1_446924_447824_-,NA	NA|262aa|up_9|NZ_CP031098.1_439467_440253_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|350aa|up_8|NZ_CP031098.1_440271_441321_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|475aa|up_7|NZ_CP031098.1_441621_443046_+	COG3949, COG3949, Uncharacterized membrane protein [Function unknown]	NA|258aa|up_6|NZ_CP031098.1_443183_443957_+	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]	NA|245aa|up_5|NZ_CP031098.1_444459_445194_+	cd00180, PKc, Catalytic domain of Protein Kinases	NA|441aa|up_4|NZ_CP031098.1_445261_446584_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|300aa|up_3|NZ_CP031098.1_446924_447824_-	NA	NA|344aa|up_2|NZ_CP031098.1_448256_449288_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|149aa|up_1|NZ_CP031098.1_449455_449902_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|151aa|up_0|NZ_CP031098.1_449983_450436_-	pfam12638, Staygreen, Staygreen protein	NA|128aa|down_0|NZ_CP031098.1_451168_451552_-	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|488aa|down_1|NZ_CP031098.1_451586_453050_-	pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase, isoform II	NA|498aa|down_2|NZ_CP031098.1_454849_456343_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|307aa|down_3|NZ_CP031098.1_456667_457588_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|266aa|down_4|NZ_CP031098.1_458401_459199_+	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|666aa|down_5|NZ_CP031098.1_459306_461304_+	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|174aa|down_6|NZ_CP031098.1_461414_461936_-	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|297aa|down_7|NZ_CP031098.1_462230_463121_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|247aa|down_8|NZ_CP031098.1_463127_463868_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|469aa|down_9|NZ_CP031098.1_463971_465378_-	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters
GCF_003345315.1_ASM334531v1	NZ_CP031098	Clostridium botulinum strain CFSAN034202 chromosome, complete genome	2	453800-454354	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,RT,cas3,WYL,csa3,DinG	Orphan	GTTAAACATTAACATGAGATGTATTTAAAT,GTTAAACATTAACATGAGATGTATTTAAAT,GTTAAACATTAACATGAGATGTATTTAAAT	30,30,30	0	0	NA	NA	III-B:III-B:III-B	8,8,8	8	Orphan	DEDDh,RT,cas3,WYL,csa3,DinG	NA|300aa|up_5|NZ_CP031098.1_446924_447824_-,NA|55aa|down_8|NZ_CP031098.1_465738_465903_+	NA|475aa|up_9|NZ_CP031098.1_441621_443046_+	COG3949, COG3949, Uncharacterized membrane protein [Function unknown]	NA|258aa|up_8|NZ_CP031098.1_443183_443957_+	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]	NA|245aa|up_7|NZ_CP031098.1_444459_445194_+	cd00180, PKc, Catalytic domain of Protein Kinases	NA|441aa|up_6|NZ_CP031098.1_445261_446584_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|300aa|up_5|NZ_CP031098.1_446924_447824_-	NA	NA|344aa|up_4|NZ_CP031098.1_448256_449288_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|149aa|up_3|NZ_CP031098.1_449455_449902_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|151aa|up_2|NZ_CP031098.1_449983_450436_-	pfam12638, Staygreen, Staygreen protein	NA|128aa|up_1|NZ_CP031098.1_451168_451552_-	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|488aa|up_0|NZ_CP031098.1_451586_453050_-	pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase, isoform II	NA|498aa|down_0|NZ_CP031098.1_454849_456343_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|307aa|down_1|NZ_CP031098.1_456667_457588_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|266aa|down_2|NZ_CP031098.1_458401_459199_+	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|666aa|down_3|NZ_CP031098.1_459306_461304_+	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|174aa|down_4|NZ_CP031098.1_461414_461936_-	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|297aa|down_5|NZ_CP031098.1_462230_463121_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|247aa|down_6|NZ_CP031098.1_463127_463868_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|469aa|down_7|NZ_CP031098.1_463971_465378_-	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|55aa|down_8|NZ_CP031098.1_465738_465903_+	NA	NA|205aa|down_9|NZ_CP031098.1_466391_467006_+	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates
GCF_003345315.1_ASM334531v1	NZ_CP031098	Clostridium botulinum strain CFSAN034202 chromosome, complete genome	3	467571-467794	3,3,3	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,RT,cas3,WYL,csa3,DinG	Orphan	GTTGAACAGTAACATAAGATGTATTTAA,GTTGAACAGTAACATAAGATGTATTTAAAT,ATGTTGAACAGTAACATAAGATGTATTTAAAT	28,30,32	1	1	467601-467636	NZ_CP031100.1_4370-4405	III-B:III-B:III-B	3,3,2	3	Orphan	DEDDh,RT,cas3,WYL,csa3,DinG	NA|55aa|up_2|NZ_CP031098.1_465738_465903_+,NA|62aa|up_0|NZ_CP031098.1_467122_467308_+,NA	NA|307aa|up_9|NZ_CP031098.1_456667_457588_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|266aa|up_8|NZ_CP031098.1_458401_459199_+	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|666aa|up_7|NZ_CP031098.1_459306_461304_+	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|174aa|up_6|NZ_CP031098.1_461414_461936_-	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|297aa|up_5|NZ_CP031098.1_462230_463121_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|247aa|up_4|NZ_CP031098.1_463127_463868_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|469aa|up_3|NZ_CP031098.1_463971_465378_-	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|55aa|up_2|NZ_CP031098.1_465738_465903_+	NA	NA|205aa|up_1|NZ_CP031098.1_466391_467006_+	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|62aa|up_0|NZ_CP031098.1_467122_467308_+	NA	NA|245aa|down_0|NZ_CP031098.1_468087_468822_+	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional	NA|239aa|down_1|NZ_CP031098.1_469074_469791_+	PRK12376, PRK12376, putative translaldolase; Provisional	NA|146aa|down_2|NZ_CP031098.1_469814_470252_+	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|95aa|down_3|NZ_CP031098.1_470280_470565_+	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|455aa|down_4|NZ_CP031098.1_470577_471942_+	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|698aa|down_5|NZ_CP031098.1_472153_474247_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|118aa|down_6|NZ_CP031098.1_474575_474929_+	pfam17032, zinc_ribbon_15, zinc-ribbon family	NA|256aa|down_7|NZ_CP031098.1_475716_476484_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|664aa|down_8|NZ_CP031098.1_476473_478465_+	pfam02687, FtsX, FtsX-like permease family	NA|380aa|down_9|NZ_CP031098.1_479030_480170_+	cd08197, DOIS, 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose
GCF_003345315.1_ASM334531v1	NZ_CP031098	Clostridium botulinum strain CFSAN034202 chromosome, complete genome	4	3534040-3534110	4	CRISPRCasFinder	no		DEDDh,RT,cas3,WYL,csa3,DinG	Orphan	ACTAGTTTATTTTTTATTGAAAA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,cas3,WYL,csa3,DinG	NA|296aa|up_9|NZ_CP031098.1_3524107_3524995_+,NA|139aa|up_8|NZ_CP031098.1_3525009_3525426_+,NA|81aa|up_7|NZ_CP031098.1_3525385_3525628_+,NA|145aa|up_5|NZ_CP031098.1_3527207_3527642_+,NA|362aa|up_4|NZ_CP031098.1_3527628_3528714_+,NA|114aa|up_3|NZ_CP031098.1_3528726_3529068_+,NA|326aa|up_1|NZ_CP031098.1_3530433_3531411_+,NA|503aa|up_0|NZ_CP031098.1_3531433_3532942_+,NA|92aa|down_0|NZ_CP031098.1_3534977_3535253_+,NA|333aa|down_1|NZ_CP031098.1_3535264_3536263_+,NA|362aa|down_2|NZ_CP031098.1_3536274_3537360_+,NA|306aa|down_3|NZ_CP031098.1_3537392_3538310_+,NA|256aa|down_5|NZ_CP031098.1_3539143_3539911_+,NA|270aa|down_7|NZ_CP031098.1_3540866_3541676_+,NA|65aa|down_9|NZ_CP031098.1_3542104_3542299_+	NA|296aa|up_9|NZ_CP031098.1_3524107_3524995_+	NA	NA|139aa|up_8|NZ_CP031098.1_3525009_3525426_+	NA	NA|81aa|up_7|NZ_CP031098.1_3525385_3525628_+	NA	NA|468aa|up_6|NZ_CP031098.1_3525791_3527195_+	COG5412, COG5412, Phage-related protein [Function unknown]	NA|145aa|up_5|NZ_CP031098.1_3527207_3527642_+	NA	NA|362aa|up_4|NZ_CP031098.1_3527628_3528714_+	NA	NA|114aa|up_3|NZ_CP031098.1_3528726_3529068_+	NA	NA|450aa|up_2|NZ_CP031098.1_3529082_3530432_+	pfam00656, Peptidase_C14, Caspase domain	NA|326aa|up_1|NZ_CP031098.1_3530433_3531411_+	NA	NA|503aa|up_0|NZ_CP031098.1_3531433_3532942_+	NA	NA|92aa|down_0|NZ_CP031098.1_3534977_3535253_+	NA	NA|333aa|down_1|NZ_CP031098.1_3535264_3536263_+	NA	NA|362aa|down_2|NZ_CP031098.1_3536274_3537360_+	NA	NA|306aa|down_3|NZ_CP031098.1_3537392_3538310_+	NA	NA|260aa|down_4|NZ_CP031098.1_3538312_3539092_+	pfam00754, F5_F8_type_C, F5/8 type C domain	NA|256aa|down_5|NZ_CP031098.1_3539143_3539911_+	NA	NA|275aa|down_6|NZ_CP031098.1_3539976_3540801_+	pfam07738, Sad1_UNC, Sad1 / UNC-like C-terminal	NA|270aa|down_7|NZ_CP031098.1_3540866_3541676_+	NA	NA|85aa|down_8|NZ_CP031098.1_3541831_3542086_+	pfam10779, XhlA, Haemolysin XhlA	NA|65aa|down_9|NZ_CP031098.1_3542104_3542299_+	NA
