The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP031027	Enterococcus faecalis strain TY1 isolate flatfish chromosome, complete genome	3065679	506615	598604	3065679	head,transposase,integrase,tail,tRNA,protease,holin,terminase,capsid	Enterococcus_phage(74.14%)	104	506314:506335	547871:547892
506314:506335	attL	ATTTATCGTTTAGCGAAGTAAA	NA	NA	NA	NA
WP_086281322.1|506615_507797_-|integrase	site-specific integrase	integrase	A0A126GGK4	Streptococcus_phage	43.5	1.6e-79
WP_114679335.1|507906_508671_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0A0YSF3	Streptococcus_phage	34.6	2.8e-21
WP_114679336.1|508686_509040_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SC02	Streptococcus_phage	44.6	1.1e-20
WP_002370869.1|509306_509483_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002370867.1|509486_509774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010830772.1|509819_510554_+	phage antirepressor KilAC domain-containing protein	NA	C9E2M3	Enterococcus_phage	60.6	8.1e-74
WP_002415146.1|510698_510914_+	hypothetical protein	NA	NA	NA	NA	NA
WP_114679337.1|510897_511626_+	hypothetical protein	NA	NA	NA	NA	NA
WP_114679338.1|511762_511954_+	hypothetical protein	NA	A0A0S2MYB0	Enterococcus_phage	92.2	2.8e-18
WP_114679339.1|511974_512394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002370860.1|512377_512614_+	hypothetical protein	NA	A0A0S2MYD6	Enterococcus_phage	81.3	2.4e-27
WP_114679340.1|512614_513307_+	ERF family protein	NA	Q6JM07	Lactococcus_phage	44.0	1.8e-22
WP_114679341.1|513319_514213_+	DUF1351 domain-containing protein	NA	A0A0S2MYB3	Enterococcus_phage	43.0	7.1e-48
WP_114679342.1|514209_514890_+	hypothetical protein	NA	A0A0S2MYA3	Enterococcus_phage	92.9	1.3e-121
WP_114679343.1|514895_515381_+	hypothetical protein	NA	A0A1C9LXV1	Streptococcus_phage	47.3	3.5e-33
WP_114679344.1|515386_516343_+	phage replisome organizer N-terminal domain-containing protein	NA	C9E2N2	Enterococcus_phage	95.3	1.5e-141
WP_010818749.1|516342_516642_+	hypothetical protein	NA	D2IZR4	Enterococcus_phage	89.9	1.0e-43
WP_114679345.1|516663_517188_+	hypothetical protein	NA	A0A0S2MYB8	Enterococcus_phage	98.3	1.2e-92
WP_010774467.1|517314_517542_+	hypothetical protein	NA	C9E2N4	Enterococcus_phage	98.7	1.0e-35
WP_016024375.1|517598_518552_+	DNA cytosine methyltransferase	NA	D2IZY5	Enterococcus_phage	100.0	9.2e-187
WP_016024376.1|518557_518743_+	hypothetical protein	NA	D2IZY6	Enterococcus_phage	100.0	2.1e-26
WP_016024377.1|518936_519116_+	hypothetical protein	NA	D2IZY7	Enterococcus_phage	100.0	1.2e-26
WP_016024378.1|519099_519486_+	hypothetical protein	NA	D2IZY8	Enterococcus_phage	100.0	7.5e-71
WP_016024379.1|519482_519833_+	hypothetical protein	NA	D2IZY9	Enterococcus_phage	100.0	6.0e-59
WP_016024380.1|519832_519970_+	hypothetical protein	NA	D2IZS3	Enterococcus_phage	100.0	2.8e-20
WP_016024381.1|519966_520491_+	DUF1642 domain-containing protein	NA	D2IZZ0	Enterococcus_phage	100.0	2.2e-97
WP_016024382.1|520673_520874_+	hypothetical protein	NA	D2IZZ2	Enterococcus_phage	100.0	9.3e-33
WP_016024383.1|521018_521435_+	transcriptional regulator	NA	D2IZZ3	Enterococcus_phage	100.0	5.8e-69
WP_016630622.1|522252_522546_+	hypothetical protein	NA	D2IZZ4	Enterococcus_phage	100.0	2.3e-40
WP_016024385.1|522593_523928_+	DNA adenine methyltransferase	NA	D2IZZ5	Enterococcus_phage	100.0	1.7e-255
WP_016024386.1|523965_524157_+	hypothetical protein	NA	D2IZZ6	Enterococcus_phage	100.0	1.1e-25
WP_016024387.1|524292_524481_+	hypothetical protein	NA	D2IZZ7	Enterococcus_phage	100.0	2.7e-26
WP_016024389.1|524733_525177_+	hypothetical protein	NA	D2IZZ9	Enterococcus_phage	100.0	3.7e-74
WP_114679348.1|525225_526029_+|terminase	small subunit of terminase	terminase	D2J000	Enterococcus_phage	100.0	1.6e-131
WP_002406139.1|526000_527305_+|terminase	PBSX family phage terminase large subunit	terminase	D2J001	Enterococcus_phage	100.0	7.7e-253
WP_016024394.1|528725_529037_+|protease	ribosomal-processing cysteine protease Prp	protease	D2J003	Enterococcus_phage	100.0	4.1e-51
WP_010821544.1|529037_530186_+|capsid	minor capsid protein	capsid	D2J004	Enterococcus_phage	100.0	4.9e-211
WP_002415687.1|530328_530997_+	DUF4355 domain-containing protein	NA	D2J005	Enterococcus_phage	100.0	2.4e-72
WP_010821546.1|531012_532050_+	hypothetical protein	NA	D2J006	Enterococcus_phage	100.0	6.5e-194
WP_002415688.1|532063_532402_+|head,tail	phage head-tail connector protein	head,tail	D2J007	Enterococcus_phage	100.0	3.5e-56
WP_002406131.1|532382_532724_+	hypothetical protein	NA	D2J008	Enterococcus_phage	100.0	1.8e-60
WP_016024395.1|532723_533263_+	hypothetical protein	NA	D2J009	Enterococcus_phage	100.0	5.5e-96
WP_002415689.1|533259_533622_+	hypothetical protein	NA	D2J010	Enterococcus_phage	100.0	1.9e-60
WP_016024396.1|533641_534100_+	hypothetical protein	NA	D2J011	Enterococcus_phage	100.0	9.5e-81
WP_002406126.1|534156_534567_+	hypothetical protein	NA	D2J012	Enterococcus_phage	100.0	1.3e-68
WP_002406125.1|534599_534959_+	hypothetical protein	NA	D2J013	Enterococcus_phage	100.0	3.8e-61
WP_114679439.1|534974_539504_+	transglycosylase SLT domain-containing protein	NA	D2J014	Enterococcus_phage	99.9	0.0e+00
WP_010821551.1|539514_539880_+	hypothetical protein	NA	D2J015	Enterococcus_phage	100.0	9.9e-65
WP_016024398.1|539896_542314_+|tail	PblB-like tail protein	tail	D2J016	Enterococcus_phage	100.0	0.0e+00
WP_002406119.1|542473_543496_+	hypothetical protein	NA	D2J018	Enterococcus_phage	100.0	3.4e-195
WP_002406118.1|543575_543797_+	hypothetical protein	NA	D2J019	Enterococcus_phage	100.0	6.0e-33
WP_002406117.1|543789_544026_+|holin	phage holin	holin	D2J020	Enterococcus_phage	100.0	6.2e-36
WP_114679349.1|544022_545282_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A0S2MYF3	Enterococcus_phage	91.4	1.0e-225
WP_114679350.1|545328_545592_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114679352.1|546314_546800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070416175.1|547063_547639_-	SHOCT domain-containing protein	NA	X5JB37	Clostridium_phage	39.1	5.8e-19
WP_002355504.1|548034_548268_+	hypothetical protein	NA	NA	NA	NA	NA
547871:547892	attR	ATTTATCGTTTAGCGAAGTAAA	NA	NA	NA	NA
WP_002358657.1|548432_548840_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010713561.1|548912_549593_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.1	3.4e-127
WP_002355428.1|549734_550709_+	choloylglycine hydrolase family protein	NA	M1H001	Paramecium_bursaria_Chlorella_virus	31.6	2.1e-24
WP_002358658.1|551152_551347_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002358659.1|551359_551989_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	78.3	7.4e-100
WP_002358660.1|552020_552206_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002358661.1|552235_552565_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_002335374.1|552692_553631_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_002358662.1|553656_554694_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002358664.1|556043_556316_+	DUF3892 domain-containing protein	NA	NA	NA	NA	NA
WP_002404695.1|557384_558200_+	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_002358667.1|558286_560158_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002358669.1|560179_561640_+	glycoside hydrolase family 1 protein	NA	NA	NA	NA	NA
WP_010713561.1|561741_562422_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.1	3.4e-127
WP_002358670.1|562823_563777_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	30.1	4.6e-13
WP_002355507.1|563777_565295_+	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_002355509.1|565436_565892_+	arginine repressor	NA	NA	NA	NA	NA
WP_002398142.1|565925_567434_+	phosphoglucomutase	NA	NA	NA	NA	NA
WP_002358673.1|567457_568012_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010708282.1|568136_568988_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_002358675.1|569342_571529_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_002355518.1|571591_571933_+	YlbF family regulator	NA	A0A1X9I5Y8	Streptococcus_phage	34.9	2.5e-09
WP_002355519.1|572088_573324_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_002358676.1|573320_576032_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_002355522.1|576028_576973_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_002355524.1|577012_578041_-	foldase	NA	NA	NA	NA	NA
WP_002355526.1|578204_578549_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_002358677.1|578549_578975_-	HIT family protein	NA	NA	NA	NA	NA
WP_002363160.1|579190_579928_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	2.0e-27
WP_002358678.1|579929_581141_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002355531.1|581269_582049_+	phosphotransferase family protein	NA	NA	NA	NA	NA
WP_002355532.1|582121_582766_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_002363162.1|582825_583572_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002355534.1|583750_584677_+	1-phosphofructokinase	NA	NA	NA	NA	NA
WP_002355535.1|584681_586100_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_002358680.1|586126_586588_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_002358681.1|586584_587562_+	tagatose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_002355538.1|587750_588284_+	DUF402 domain-containing protein	NA	NA	NA	NA	NA
WP_002358682.1|588371_588803_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002384914.1|588878_590093_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_002363168.1|590267_591647_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_002355543.1|591820_593395_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	26.1	2.7e-34
WP_002355544.1|593569_594013_+	DUF3290 domain-containing protein	NA	NA	NA	NA	NA
WP_002355545.1|594028_594676_+	DUF421 domain-containing protein	NA	NA	NA	NA	NA
WP_002358683.1|594742_595813_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002355547.1|595854_596169_-	DUF1827 family protein	NA	NA	NA	NA	NA
WP_002386935.1|596363_598604_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	39.9	6.6e-127
>prophage 2
NZ_CP031027	Enterococcus faecalis strain TY1 isolate flatfish chromosome, complete genome	3065679	814075	821995	3065679		Planktothrix_phage(16.67%)	11	NA	NA
WP_002355794.1|814075_815134_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.1	2.0e-17
WP_114679359.1|815133_816090_+	ATP-binding cassette domain-containing protein	NA	A0A1J0FA64	Only_Syngen_Nebraska_virus	23.9	3.2e-06
WP_002355796.1|816130_817201_+	helix-turn-helix domain-containing protein	NA	A0A288TXV8	Enterococcus_phage	49.0	7.6e-89
WP_002355797.1|817600_818122_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.3	3.0e-14
WP_002355798.1|818235_818436_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_002355799.1|818496_818856_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_002425711.1|818901_819282_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_002358829.1|819349_819709_+	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_002368164.1|819776_820271_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002361365.1|820288_820804_+	GrpB family protein	NA	A0A2K5B2B6	Erysipelothrix_phage	48.8	7.7e-39
WP_002358831.1|820819_821995_-	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	47.7	2.5e-85
>prophage 3
NZ_CP031027	Enterococcus faecalis strain TY1 isolate flatfish chromosome, complete genome	3065679	851171	914871	3065679	portal,head,integrase,tail,tRNA,protease,holin,plate,terminase,capsid	Enterococcus_phage(42.5%)	85	868026:868053	905355:905382
WP_002396467.1|851171_851666_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_002358858.1|851658_852180_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002355840.1|852349_852559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002358859.1|852632_853643_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_002404478.1|853666_854674_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_002355844.1|854663_855332_-	beta-phosphoglucomutase	NA	A0A1D8KNV9	Synechococcus_phage	24.6	8.6e-06
WP_010708306.1|855324_857619_-	glycoside hydrolase family 65 protein	NA	NA	NA	NA	NA
WP_002358862.1|857899_860068_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	37.2	7.3e-06
WP_002358863.1|860133_860958_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_002358864.1|861017_861833_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	29.5	5.5e-23
WP_002358865.1|861958_862921_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002358867.1|862901_863201_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002358868.1|863193_863508_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_002404475.1|863662_864343_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
WP_025186153.1|864381_865023_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA	NA
WP_002358871.1|865024_865174_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002358872.1|865520_866297_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002355866.1|867068_867377_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_002358874.1|867409_867754_+|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_002355868.1|867766_868054_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
868026:868053	attL	AAGTATCAGTTTATCCAGTAGCTAACTA	NA	NA	NA	NA
WP_010784379.1|868141_869296_-|integrase	site-specific integrase	integrase	Q9AZK8	Lactococcus_phage	36.1	2.2e-65
WP_002403734.1|869364_869934_-	DUF3221 domain-containing protein	NA	NA	NA	NA	NA
WP_010784380.1|870114_870543_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_010716842.1|870560_870974_-	helix-turn-helix transcriptional regulator	NA	A0A0M4QX29	Bacillus_phage	53.2	3.6e-31
WP_002406956.1|871206_871416_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002406954.1|871419_871704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049093909.1|871717_872440_+	ORF6C domain-containing protein	NA	D2IYT0	Enterococcus_phage	64.0	1.9e-43
WP_002364224.1|872479_872662_-	YegP family protein	NA	NA	NA	NA	NA
WP_002364223.1|872714_872909_+	hypothetical protein	NA	D2IZ57	Enterococcus_phage	90.6	1.9e-27
WP_002364222.1|872899_873085_+	hypothetical protein	NA	D2IZ58	Enterococcus_phage	94.7	3.6e-23
WP_002380444.1|873128_873452_+	hypothetical protein	NA	D2IYT5	Enterococcus_phage	86.9	7.7e-45
WP_002364220.1|873451_873679_+	hypothetical protein	NA	D2IZX4	Enterococcus_phage	97.3	8.6e-35
WP_002364219.1|873776_874718_+	YqaJ viral recombinase family protein	NA	D2IZK1	Enterococcus_phage	99.7	3.8e-177
WP_002364218.1|874720_875611_+	recombinase RecT	NA	D2IYT9	Enterococcus_phage	100.0	1.3e-163
WP_002372048.1|875624_876587_+	DUF4373 domain-containing protein	NA	D2IZR2	Enterococcus_phage	100.0	3.0e-169
WP_002368214.1|876590_876893_+	hypothetical protein	NA	D2IZR3	Enterococcus_phage	99.0	1.6e-47
WP_002372047.1|876893_877193_+	hypothetical protein	NA	D2IZY1	Enterococcus_phage	90.9	1.3e-43
WP_002372046.1|877201_877636_+	RusA family crossover junction endodeoxyribonuclease	NA	D2IYU2	Enterococcus_phage	80.0	1.1e-57
WP_002372045.1|878542_878959_+	autolysin	NA	D2IZL7	Enterococcus_phage	97.1	1.6e-66
WP_114679360.1|881056_881287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010708333.1|881317_881494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010708334.1|881511_881838_+	hypothetical protein	NA	C5J957	Streptococcus_phage	65.9	3.7e-31
WP_010708335.1|882027_882387_+|terminase	P27 family phage terminase small subunit	terminase	A0A0U4JV93	Exiguobacterium_phage	48.5	9.9e-17
WP_010708336.1|882391_884179_+|terminase	terminase large subunit	terminase	Q9AZY8	Lactococcus_phage	64.2	2.6e-219
WP_025189047.1|884189_885410_+|portal	phage portal protein	portal	Q0H263	Geobacillus_phage	59.6	2.7e-138
WP_010708338.1|885406_885988_+|head,protease	HK97 family phage prohead protease	head,protease	Q0H262	Geobacillus_phage	67.9	7.6e-67
WP_010708339.1|885990_887259_+|capsid	phage major capsid protein	capsid	Q0H261	Geobacillus_phage	54.8	1.3e-92
WP_010708340.1|887261_887405_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010708341.1|887431_887707_+|head,tail	phage head-tail connector protein	head,tail	Q9AZY3	Lactococcus_phage	44.4	9.6e-12
WP_010708342.1|887699_888020_+|head	phage head closure protein	head	Q9AZY2	Lactococcus_phage	46.9	1.1e-19
WP_174222122.1|888006_888393_+	HK97 gp10 family phage protein	NA	A0A1S5SFC4	Streptococcus_phage	51.8	6.0e-20
WP_010708344.1|888395_888713_+	hypothetical protein	NA	Q9AZY0	Lactococcus_phage	56.2	1.8e-25
WP_010708345.1|888729_889329_+|tail	phi13 family phage major tail protein	tail	Q9AZX9	Lactococcus_phage	68.6	1.8e-71
WP_114679361.1|889331_889697_+	hypothetical protein	NA	Q9AZX8	Lactococcus_phage	67.2	5.5e-39
WP_077143655.1|889701_889905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010708348.1|889920_892443_+|tail	phage tail tape measure protein	tail	Q9AZX7	Lactococcus_phage	32.3	3.6e-89
WP_010708349.1|892447_893197_+	hypothetical protein	NA	Q9AZX6	Lactococcus_phage	60.6	1.1e-89
WP_010784389.1|893193_895992_+|tail	phage tail protein	tail	Q9AZX5	Lactococcus_phage	48.1	3.4e-197
WP_002404576.1|896010_896892_+|plate	phage baseplate upper protein	plate	Q9AYV5	Lactococcus_phage	26.6	4.0e-11
WP_002404577.1|896884_897481_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002404578.1|897477_897765_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002404579.1|897764_898292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002404580.1|898310_898685_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002404581.1|898684_898822_+	XkdX family protein	NA	NA	NA	NA	NA
WP_010815473.1|898855_899077_+	hypothetical protein	NA	D2J019	Enterococcus_phage	95.9	3.9e-32
WP_002384371.1|899069_899303_+|holin	phage holin	holin	D2J020	Enterococcus_phage	87.8	1.9e-29
WP_002394567.1|899303_900545_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A0S2MYF3	Enterococcus_phage	73.3	8.9e-174
WP_002357053.1|901381_901582_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	80.3	1.6e-24
WP_002364188.1|901653_901905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002382622.1|902719_902926_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002382623.1|902892_903951_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162781809.1|904638_904890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002363390.1|904910_905162_-	hypothetical protein	NA	A0A097BYB1	Enterococcus_phage	66.2	4.6e-21
WP_002358876.1|905582_906035_+	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
905355:905382	attR	AAGTATCAGTTTATCCAGTAGCTAACTA	NA	NA	NA	NA
WP_002355870.1|906105_906921_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_002391500.1|907092_908157_+	aminopeptidase P family protein	NA	NA	NA	NA	NA
WP_002355872.1|908170_908491_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002355874.1|908823_909255_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_002355875.1|909247_909700_+	transcription antitermination factor NusB	NA	NA	NA	NA	NA
WP_002355876.1|909803_910649_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	36.7	9.7e-39
WP_002358878.1|910658_912005_+	exodeoxyribonuclease VII large subunit	NA	A0A160DEV2	Gordonia_phage	32.8	1.0e-29
WP_002355878.1|912006_912237_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_002355879.1|912236_913118_+	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_002355880.1|913131_913947_+	TlyA family RNA methyltransferase	NA	NA	NA	NA	NA
WP_002358879.1|914361_914871_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
>prophage 4
NZ_CP031027	Enterococcus faecalis strain TY1 isolate flatfish chromosome, complete genome	3065679	1219153	1236834	3065679	holin,tail	Enterococcus_phage(46.15%)	18	NA	NA
WP_002360498.1|1219153_1221550_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	23.8	2.9e-19
WP_002360497.1|1221574_1221925_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_002382232.1|1222207_1222693_-	toxin	NA	A0A097BY56	Enterococcus_phage	70.5	4.4e-60
WP_002360496.1|1222727_1223210_-	helix-turn-helix domain-containing protein	NA	R9QTP6	Staphylococcus_phage	47.7	2.6e-20
WP_002404499.1|1223606_1224362_+	DnaD domain protein	NA	A0A0K0MX39	Streptococcus_phage	56.0	8.7e-31
WP_002384644.1|1224380_1225223_+	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	31.0	5.7e-31
WP_002360492.1|1225289_1225682_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002360491.1|1225701_1226109_+	RinA family phage transcriptional activator	NA	NA	NA	NA	NA
WP_002382237.1|1226330_1226747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_114679366.1|1226759_1227272_+|tail	phage major tail protein, TP901-1 family	tail	W6LP72	Streptococcus_phage	49.4	5.2e-35
WP_002357848.1|1227304_1227664_+	hypothetical protein	NA	A0A0F6N4J9	Staphylococcus_phage	32.2	7.6e-09
WP_002382238.1|1227756_1228050_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002404500.1|1228039_1230973_+	membrane protein	NA	A0A1U9WR55	Streptococcus_virus	25.0	2.5e-09
WP_002360484.1|1230974_1231901_+|tail	phage tail family protein	tail	C9E2K5	Enterococcus_phage	78.6	1.2e-146
WP_002360481.1|1231913_1233371_+|tail	phage tail protein	tail	C9E2K6	Enterococcus_phage	47.7	4.2e-175
WP_002360478.1|1233403_1235173_+	hypothetical protein	NA	A0A097BYA8	Enterococcus_phage	71.8	9.8e-142
WP_002357842.1|1235196_1235592_+|holin	phage holin family protein	holin	F0PIJ6	Enterococcus_phage	48.9	2.8e-33
WP_002404501.1|1235736_1236834_+	SH3 domain-containing protein	NA	A0A139ZVY1	Enterococcus_phage	44.6	4.0e-77
>prophage 5
NZ_CP031027	Enterococcus faecalis strain TY1 isolate flatfish chromosome, complete genome	3065679	1700944	1741076	3065679	transposase,integrase	Streptococcus_phage(56.25%)	37	1710156:1710180	1715222:1715246
WP_002360098.1|1700944_1702123_-|integrase	site-specific integrase	integrase	S6C485	Thermus_phage	30.3	2.0e-29
WP_002297662.1|1702225_1702537_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002360096.1|1702885_1703131_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002297668.1|1703124_1703526_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_010708157.1|1706090_1707353_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002360092.1|1707490_1707715_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002298159.1|1707711_1707876_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002298157.1|1707969_1709262_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	40.4	3.9e-31
WP_010708156.1|1709535_1709796_-	hypothetical protein	NA	NA	NA	NA	NA
1710156:1710180	attL	TTTCTATTTACACAAAATATTTTAC	NA	NA	NA	NA
WP_101495273.1|1710400_1711562_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	2.0e-79
WP_077497620.1|1711634_1711841_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	U5P429	Shigella_phage	53.3	2.0e-06
WP_002383094.1|1711844_1711958_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_002297874.1|1712110_1712506_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_002287875.1|1712518_1713367_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_002287874.1|1713381_1714209_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	M4QNT1	Ostreococcus_lucimarinus_virus	38.0	5.4e-50
WP_002349114.1|1714220_1715081_-	Rossmann-like and DUF2520 domain-containing protein	NA	NA	NA	NA	NA
WP_010708154.1|1716813_1718133_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
1715222:1715246	attR	GTAAAATATTTTGTGTAAATAGAAA	NA	NA	NA	NA
WP_002285815.1|1718129_1718783_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.2	4.0e-24
WP_002330916.1|1720353_1721730_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002298083.1|1721729_1722386_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.1	1.3e-22
WP_010706480.1|1724499_1724850_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002369219.1|1725154_1725442_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002360081.1|1725442_1725670_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
WP_114679375.1|1725740_1726931_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_002298830.1|1727965_1728970_-	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	66.3	1.4e-121
WP_002384404.1|1728966_1731090_-|transposase	transposase	transposase	A0A1S5SF30	Streptococcus_phage	58.7	2.4e-174
WP_002330910.1|1731094_1733542_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	76.4	0.0e+00
WP_002298826.1|1733528_1733918_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	66.7	2.5e-42
WP_002383098.1|1733969_1734710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002360078.1|1734716_1735553_-	abortive infection family protein	NA	NA	NA	NA	NA
WP_002298823.1|1735617_1736121_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	61.2	3.1e-56
WP_002298822.1|1736133_1736355_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	87.7	4.5e-28
WP_002360077.1|1736751_1738002_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	62.1	6.1e-114
WP_002330905.1|1738133_1738268_-	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_002360076.1|1738264_1739449_-	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	62.1	1.0e-142
WP_002298811.1|1739797_1739965_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002298807.1|1740719_1741076_-	hypothetical protein	NA	A0A1S5SFB5	Streptococcus_phage	80.5	2.0e-49
>prophage 6
NZ_CP031027	Enterococcus faecalis strain TY1 isolate flatfish chromosome, complete genome	3065679	1870716	1882056	3065679	holin	Enterococcus_phage(50.0%)	11	NA	NA
WP_002359997.1|1870716_1871787_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.7	6.8e-29
WP_002359996.1|1873144_1873393_+	hypothetical protein	NA	A0A097BYB1	Enterococcus_phage	91.5	6.1e-34
WP_002399566.1|1873411_1874410_-	Abi family protein	NA	A0A059NT88	Lactococcus_phage	43.5	1.0e-79
WP_002399567.1|1875190_1876192_-	endolysin	NA	F0PIJ7	Enterococcus_phage	68.4	1.9e-86
WP_002359993.1|1876163_1876442_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_002359992.1|1876441_1876696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359991.1|1876708_1877128_-	XkdX family protein	NA	F0PIJ5	Enterococcus_phage	85.4	1.1e-56
WP_114679382.1|1877115_1878303_-	collagen-like protein	NA	F0PIJ4	Enterococcus_phage	65.4	8.8e-62
WP_002359989.1|1878289_1878778_-	hypothetical protein	NA	A0A1W6JI16	Lactococcus_phage	46.0	8.4e-35
WP_002359987.1|1878790_1879483_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359986.1|1879479_1882056_-	endolysin	NA	A0A1B1IM47	Lactococcus_phage	46.6	1.3e-30
>prophage 7
NZ_CP031027	Enterococcus faecalis strain TY1 isolate flatfish chromosome, complete genome	3065679	1900326	1913541	3065679		Enterococcus_phage(58.82%)	25	NA	NA
WP_002415447.1|1900326_1900746_-	hypothetical protein	NA	A0A2H4J1L3	uncultured_Caudovirales_phage	51.0	4.7e-18
WP_010708137.1|1900735_1901932_-	ParB N-terminal domain-containing protein	NA	Q708N6	Streptococcus_phage	51.1	1.8e-110
WP_002393643.1|1902339_1902765_-	ArpU family transcriptional regulator	NA	D2IYV6	Enterococcus_phage	42.3	9.9e-24
WP_010708136.1|1903063_1903264_-	hypothetical protein	NA	D2IYV2	Enterococcus_phage	89.4	2.4e-28
WP_010708135.1|1903264_1903750_-	hypothetical protein	NA	C9E2P0	Enterococcus_phage	98.1	1.7e-88
WP_010708134.1|1903746_1904271_-	DUF1642 domain-containing protein	NA	D2IZZ0	Enterococcus_phage	51.1	2.4e-35
WP_010708133.1|1904252_1904609_-	DUF5406 family protein	NA	F0PIH7	Enterococcus_phage	78.4	5.3e-47
WP_010708132.1|1904605_1904872_-	hypothetical protein	NA	A0A059T7S7	Listeria_phage	48.3	4.4e-14
WP_010708131.1|1905342_1905486_-	hypothetical protein	NA	D2IYU4	Enterococcus_phage	85.1	3.4e-13
WP_010708130.1|1905478_1906114_-	DUF2187 domain-containing protein	NA	D2IZY3	Enterococcus_phage	89.2	2.3e-69
WP_010708129.1|1906127_1906460_-	hypothetical protein	NA	A0A0S2MYB8	Enterococcus_phage	55.7	8.0e-21
WP_002399588.1|1906456_1906882_-	RusA family crossover junction endodeoxyribonuclease	NA	D2IYU2	Enterococcus_phage	80.4	1.2e-58
WP_114679385.1|1906890_1907760_-	ATP-binding protein	NA	U5PWH5	Bacillus_phage	29.1	3.6e-20
WP_114679386.1|1907773_1908640_-	DUF4373 domain-containing protein	NA	D2IZY0	Enterococcus_phage	46.3	2.8e-49
WP_029656691.1|1908653_1909472_-	PD-(D/E)XK nuclease-like domain-containing protein	NA	J7KGZ1	Streptococcus_phage	50.8	1.9e-63
WP_002393136.1|1909431_1910355_-	recombinase RecT	NA	A0A1S5S8V5	Streptococcus_phage	53.6	1.2e-66
WP_002359951.1|1910344_1910677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010708125.1|1910707_1910998_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010708124.1|1911082_1911409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002380498.1|1911409_1911619_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002393142.1|1911761_1911995_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002393143.1|1912027_1912555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010708122.1|1912612_1912786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010708121.1|1912825_1913011_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010708120.1|1913163_1913541_+	helix-turn-helix transcriptional regulator	NA	A0A2P1JU09	Anoxybacillus_phage	37.0	1.2e-12
>prophage 8
NZ_CP031027	Enterococcus faecalis strain TY1 isolate flatfish chromosome, complete genome	3065679	2064959	2075970	3065679		Streptococcus_phage(100.0%)	12	NA	NA
WP_002359823.1|2064959_2065982_-	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	65.4	3.6e-120
WP_002383559.1|2065978_2068093_-	FUSC family protein	NA	A0A1S5SF30	Streptococcus_phage	60.5	7.0e-179
WP_002359821.1|2068098_2070546_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	75.0	0.0e+00
WP_002359820.1|2070532_2070922_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	68.3	1.8e-43
WP_002359819.1|2070998_2071613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002359818.1|2071628_2072201_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002359817.1|2072233_2072734_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	56.1	6.8e-48
WP_002298822.1|2072746_2072968_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	87.7	4.5e-28
WP_002359816.1|2072972_2073110_-	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_002359815.1|2073106_2074291_-	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	61.1	8.0e-140
WP_002359814.1|2074547_2074802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077143702.1|2074827_2075970_-	DNA (cytosine-5-)-methyltransferase	NA	A0A1S5SEK0	Streptococcus_phage	59.7	1.4e-120
>prophage 9
NZ_CP031027	Enterococcus faecalis strain TY1 isolate flatfish chromosome, complete genome	3065679	2390432	2437662	3065679	portal,tail,tRNA,protease,holin,terminase,capsid	Enterococcus_phage(37.14%)	62	NA	NA
WP_002359567.1|2390432_2390939_-|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_002359566.1|2391250_2392096_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_002359565.1|2392225_2392855_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_002362548.1|2392972_2394334_-	magnesium transporter	NA	NA	NA	NA	NA
WP_002359563.1|2394364_2395258_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_002356486.1|2395265_2396063_-	NAD kinase	NA	NA	NA	NA	NA
WP_002381475.1|2396075_2396780_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_002356483.1|2396946_2397525_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_002359562.1|2397588_2398248_+	DsbA family protein	NA	NA	NA	NA	NA
WP_002404853.1|2398530_2399226_-	helix-turn-helix transcriptional regulator	NA	A0A0A7AQV8	Bacillus_phage	42.3	7.6e-05
WP_002356480.1|2399440_2401252_-	oligoendopeptidase F	NA	NA	NA	NA	NA
WP_002359560.1|2401299_2402484_-	competence protein ComA	NA	NA	NA	NA	NA
WP_002356478.1|2402572_2403235_-	adaptor protein MecA	NA	NA	NA	NA	NA
WP_002356477.1|2403577_2403976_-	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_002359559.1|2404335_2405346_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_002359558.1|2405388_2406726_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.5	4.0e-47
WP_002359557.1|2406834_2407083_+	hypothetical protein	NA	A0A0S2MYI8	Enterococcus_phage	97.6	2.9e-36
WP_002359555.1|2407238_2407907_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359554.1|2407911_2408289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025186173.1|2408272_2409121_-	ParA family protein	NA	A0A1X9IGI7	Lactococcus_phage	38.4	2.6e-31
WP_002404849.1|2409303_2410410_-	SH3 domain-containing protein	NA	V5URN7	Enterococcus_phage	47.7	1.2e-84
WP_002358058.1|2410463_2410862_-|holin	phage holin family protein	holin	F0PIJ6	Enterococcus_phage	54.2	1.6e-36
WP_114679394.1|2410911_2411715_-	hypothetical protein	NA	D2IYX9	Enterococcus_phage	83.1	5.9e-118
WP_085406754.1|2411726_2412782_-	structural protein	NA	D2J073	Enterococcus_phage	37.2	6.9e-50
WP_086328916.1|2412792_2413917_-	siphovirus ReqiPepy6 Gp37-like family protein	NA	Q77MU2	Lactococcus_phage	45.3	2.0e-87
WP_002371567.1|2413919_2414819_-|tail	phage tail family protein	tail	D2J071	Enterococcus_phage	37.4	2.9e-49
WP_085408020.1|2414818_2419570_-|tail	phage tail tape measure protein	tail	J7KDT4	Streptococcus_phage	43.0	7.2e-14
WP_002358069.1|2419791_2420139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002396881.1|2420195_2420669_-	Ig domain-containing protein	NA	A0A1D6Z291	Staphylococcus_phage	44.4	7.9e-22
WP_002358071.1|2420742_2421336_-|tail	tail protein	tail	A0A060AKE9	Staphylococcus_phage	35.1	2.6e-22
WP_114679395.1|2421368_2421764_-	hypothetical protein	NA	A8ATA3	Listeria_phage	45.0	9.8e-18
WP_002359539.1|2421760_2422153_-	hypothetical protein	NA	A0A1S5SF89	Streptococcus_phage	38.5	1.3e-09
WP_002404844.1|2422149_2422524_-	hypothetical protein	NA	A8ATA1	Listeria_phage	52.1	1.5e-28
WP_002359536.1|2422510_2422816_-	hypothetical protein	NA	A0A0U4K528	Bacillus_phage	47.5	2.2e-09
WP_002359535.1|2422893_2424039_-|capsid	phage major capsid protein	capsid	A8AT98	Listeria_phage	56.5	2.1e-116
WP_174222124.1|2424065_2424833_-|protease	Clp protease ClpP	protease	A0A2P0ZLE3	Lactobacillus_phage	50.4	2.6e-54
WP_002359533.1|2424810_2425986_-|portal	phage portal protein	portal	A0A068A211	Staphylococcus_phage	41.3	6.0e-79
WP_002359532.1|2426018_2426201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002358079.1|2426215_2426383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359531.1|2426395_2428036_-|terminase	terminase large subunit	terminase	A0A1S5SF58	Streptococcus_phage	58.9	3.7e-183
WP_002359529.1|2428032_2428386_-	hypothetical protein	NA	A0A2H4JAH7	uncultured_Caudovirales_phage	67.8	2.7e-35
WP_002359528.1|2428556_2428808_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114679397.1|2428804_2429530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359526.1|2429520_2429832_-	HNH endonuclease	NA	A0A1S5SFB3	Streptococcus_phage	63.1	2.7e-31
WP_002359525.1|2429824_2430139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359521.1|2430131_2430320_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033655530.1|2430813_2431344_-	ArpU family transcriptional regulator	NA	D7RWH7	Brochothrix_phage	29.9	5.4e-11
WP_002393129.1|2431510_2431822_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162781814.1|2431842_2432163_-	PcfU	NA	D2IYU7	Enterococcus_phage	97.2	2.1e-55
WP_002359516.1|2432180_2432387_-	hypothetical protein	NA	A0A1B1V001	Enterococcus_phage	96.8	7.4e-25
WP_002359515.1|2432396_2432789_-	hypothetical protein	NA	A0A0S2MYE6	Enterococcus_phage	95.4	1.8e-67
WP_002359514.1|2432813_2432978_-	hypothetical protein	NA	A0A0S2MYC2	Enterococcus_phage	94.4	3.1e-10
WP_002359512.1|2432986_2433286_-	hypothetical protein	NA	D2IZY1	Enterococcus_phage	80.8	5.5e-37
WP_114679399.1|2433306_2433783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359510.1|2433757_2434012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025186167.1|2434014_2434527_-	Holliday junction resolvase RecU	NA	A0A2K9V2V4	Faecalibacterium_phage	42.8	1.8e-24
WP_002359508.1|2434516_2434837_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002359505.1|2434833_2435649_-	hypothetical protein	NA	Q0SPI6	Clostridium_phage	34.2	6.3e-27
WP_114679400.1|2435875_2436628_-	hypothetical protein	NA	A0A1S5S8N0	Streptococcus_phage	43.6	5.1e-47
WP_002382539.1|2436647_2437106_-	hypothetical protein	NA	A0A097BY30	Enterococcus_phage	45.4	3.7e-24
WP_002382538.1|2437162_2437441_-	hypothetical protein	NA	A0A0A7S062	Clostridium_phage	52.2	1.3e-13
WP_002380711.1|2437434_2437662_-	hypothetical protein	NA	D2IZX4	Enterococcus_phage	55.4	3.2e-13
>prophage 10
NZ_CP031027	Enterococcus faecalis strain TY1 isolate flatfish chromosome, complete genome	3065679	2515322	2525062	3065679		Streptococcus_phage(57.14%)	11	NA	NA
WP_002385686.1|2515322_2517506_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.8	3.1e-286
WP_002356379.1|2517538_2518135_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A0C5K925	Enterococcus_phage	56.4	6.0e-51
WP_002359440.1|2518179_2519298_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002356377.1|2519423_2520182_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_002359439.1|2520165_2520828_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	31.6	5.1e-19
WP_002359438.1|2520842_2521715_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	57.2	1.1e-80
WP_002356372.1|2521826_2522174_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	36.7	8.1e-16
WP_002356371.1|2522166_2523006_-	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002404418.1|2523122_2524073_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	33.0	1.4e-33
WP_002356367.1|2524074_2524404_-	cyclic-di-AMP receptor	NA	NA	NA	NA	NA
WP_002356366.1|2524423_2525062_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	53.8	2.1e-54
>prophage 11
NZ_CP031027	Enterococcus faecalis strain TY1 isolate flatfish chromosome, complete genome	3065679	2546336	2594273	3065679	head,portal,integrase,tail,tRNA,protease,holin,terminase,capsid	Enterococcus_phage(41.03%)	60	2558386:2558401	2594909:2594924
WP_002367232.1|2546336_2547047_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_002404589.1|2547057_2547600_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_002356329.1|2547686_2548457_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_002356327.1|2548622_2549198_+	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_002404588.1|2549288_2550854_+	membrane protein	NA	NA	NA	NA	NA
WP_002404587.1|2550805_2551939_+	DUF4950 domain-containing protein	NA	C9E2L5	Enterococcus_phage	51.5	6.1e-20
WP_002359404.1|2552198_2553263_-	FUSC family protein	NA	NA	NA	NA	NA
WP_002382470.1|2553518_2553770_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002367242.1|2554273_2554723_-	protein-export chaperone SecB	NA	NA	NA	NA	NA
WP_002367243.1|2554722_2555004_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002367244.1|2555000_2555582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114679405.1|2555987_2557289_-	LysM peptidoglycan-binding domain-containing protein	NA	D2J077	Enterococcus_phage	93.5	2.5e-227
WP_010784229.1|2557289_2557685_-|holin	phage holin family protein	holin	A0A097QQ04	Enterococcus_phage	64.8	2.3e-38
WP_162781816.1|2557718_2560136_-	SGNH/GDSL hydrolase family protein	NA	A0A0S2SXG8	Bacillus_phage	22.1	3.7e-06
2558386:2558401	attL	AATTTTTTATTGACAA	NA	NA	NA	NA
WP_114679406.1|2560152_2562990_-|tail	phage tail protein	tail	D7RWE0	Brochothrix_phage	43.2	1.9e-86
WP_104847214.1|2562986_2563691_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_114679407.1|2563693_2565991_-|tail	phage tail tape measure protein	tail	V5UPR9	Enterococcus_phage	56.0	3.1e-79
WP_070363958.1|2566182_2566638_-	hypothetical protein	NA	A0A2H4J956	uncultured_Caudovirales_phage	37.4	3.4e-14
WP_002393808.1|2566637_2567282_-|tail	tail protein	tail	A0A2H4JGN2	uncultured_Caudovirales_phage	34.1	9.1e-29
WP_002415252.1|2567278_2567641_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_104847216.1|2567630_2567969_-	hypothetical protein	NA	A0A1B0T6B7	Bacillus_phage	52.3	1.9e-25
WP_104847217.1|2567958_2568285_-|head	phage head closure protein	head	A0A0N7IRA3	Lactobacillus_phage	52.4	1.3e-20
WP_162781817.1|2568262_2568553_-|head,tail	phage head-tail connector protein	head,tail	A0A1B1P7M9	Bacillus_phage	64.3	7.4e-23
WP_114679409.1|2568545_2569910_-|capsid	phage major capsid protein	capsid	A0A1B2APY9	Phage_Wrath	67.6	2.2e-125
WP_002385658.1|2569922_2570495_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4J6Z9	uncultured_Caudovirales_phage	62.4	1.1e-62
WP_114679410.1|2570466_2571693_-|portal	phage portal protein	portal	A0A2H4J9C7	uncultured_Caudovirales_phage	65.8	4.6e-146
WP_104847219.1|2571711_2573439_-|terminase	terminase large subunit	terminase	A0A2H4JDG5	uncultured_Caudovirales_phage	70.4	3.5e-253
WP_002365107.1|2573435_2573888_-	hypothetical protein	NA	A0A2H4JFK0	uncultured_Caudovirales_phage	68.5	8.0e-48
WP_010782959.1|2574135_2574513_-	HNH endonuclease	NA	A0A1B0T6C5	Bacillus_phage	69.1	1.5e-44
WP_114679411.1|2574512_2574920_-	hypothetical protein	NA	A0A1B1P7N8	Bacillus_phage	38.6	2.9e-12
WP_002367269.1|2575442_2575910_-	ArpU family transcriptional regulator	NA	D7RWH7	Brochothrix_phage	27.8	2.9e-08
WP_114679412.1|2576297_2576501_-	hypothetical protein	NA	D2IZL5	Enterococcus_phage	92.5	8.8e-31
WP_162837175.1|2576500_2576662_-	hypothetical protein	NA	D2IZL4	Enterococcus_phage	94.3	2.0e-22
WP_010784246.1|2576662_2577190_-	DUF1642 domain-containing protein	NA	D2IZL3	Enterococcus_phage	55.3	1.8e-43
WP_002414787.1|2577203_2577482_-	hypothetical protein	NA	A0A0S2MYC7	Enterococcus_phage	94.6	6.9e-42
WP_033640479.1|2577869_2578082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033640481.1|2578426_2578633_-	hypothetical protein	NA	A0A1B1V001	Enterococcus_phage	95.2	4.8e-24
WP_033640483.1|2578648_2579254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002415263.1|2579302_2579683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002415264.1|2579683_2580154_-	DUF1064 domain-containing protein	NA	A0A1I9KKZ1	Lactobacillus_phage	46.6	6.4e-32
WP_002415266.1|2580302_2580572_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002370005.1|2580710_2581562_-	ATP-binding protein	NA	U5PVD6	Bacillus_phage	33.3	6.4e-22
WP_114679413.1|2581573_2582353_-	DnaD domain protein	NA	Q6J1V6	Lactobacillus_phage	58.5	7.6e-38
WP_162781818.1|2582367_2583183_-	PD-(D/E)XK nuclease-like domain-containing protein	NA	J7KGZ1	Streptococcus_phage	49.8	1.3e-59
WP_114679414.1|2583145_2584156_-	recombinase RecT	NA	A0A1X9I5N6	Streptococcus_phage	62.6	9.7e-78
WP_002367281.1|2584256_2584481_-	hypothetical protein	NA	D2IZX4	Enterococcus_phage	68.5	3.7e-22
WP_114679415.1|2584477_2584777_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114679416.1|2584843_2585023_-	hypothetical protein	NA	A0A0S2MY96	Enterococcus_phage	77.2	2.6e-18
WP_002367284.1|2585057_2585327_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114679417.1|2585402_2585717_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002385636.1|2585841_2586018_-	helix-turn-helix domain-containing protein	NA	D2IZW2	Enterococcus_phage	65.5	1.3e-14
WP_114679419.1|2586105_2586384_+	hypothetical protein	NA	D2IZW1	Enterococcus_phage	87.0	1.2e-38
WP_174089958.1|2586380_2586542_-	hypothetical protein	NA	D2IZW0	Enterococcus_phage	90.6	3.0e-18
WP_174089957.1|2586848_2587172_+	helix-turn-helix transcriptional regulator	NA	A0A097QQ00	Enterococcus_phage	97.2	1.0e-52
WP_114679421.1|2587190_2587535_+	ImmA/IrrE family metallo-endopeptidase	NA	D2IZV8	Enterococcus_phage	70.2	8.0e-40
WP_114679422.1|2587593_2588322_+	ion transporter	NA	A0A1B0Y2S3	Lactobacillus_phage	50.8	1.3e-15
WP_114679423.1|2588476_2589658_+|integrase	site-specific integrase	integrase	Q9AZK8	Lactococcus_phage	31.8	1.9e-48
WP_002356321.1|2589760_2589910_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_174222123.1|2590035_2592291_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
WP_002359397.1|2592335_2594273_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.3	3.1e-112
2594909:2594924	attR	TTGTCAATAAAAAATT	NA	NA	NA	NA
>prophage 12
NZ_CP031027	Enterococcus faecalis strain TY1 isolate flatfish chromosome, complete genome	3065679	2907550	2947637	3065679	holin,tRNA	Enterobacteria_phage(14.29%)	41	NA	NA
WP_002354830.1|2907550_2908234_-|holin	antiholin-like protein LrgB	holin	NA	NA	NA	NA
WP_002354829.1|2908230_2908650_-|holin	antiholin-like murein hydrolase modulator LrgA	holin	NA	NA	NA	NA
WP_002358985.1|2908801_2909530_-	LytTR family transcriptional regulator DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002390682.1|2909510_2911259_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	28.4	3.2e-60
WP_002354826.1|2911371_2912190_-	membrane protein	NA	NA	NA	NA	NA
WP_002354825.1|2912202_2912874_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002354824.1|2912870_2913593_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.7	9.2e-22
WP_002386234.1|2913954_2914353_-	OsmC family protein	NA	NA	NA	NA	NA
WP_002354822.1|2914553_2914823_+	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_002354818.1|2914933_2915083_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002379001.1|2915098_2916073_+	GTP-binding protein	NA	NA	NA	NA	NA
WP_002383181.1|2916106_2916229_+	putative metal homeostasis protein	NA	NA	NA	NA	NA
WP_010708369.1|2916249_2917785_+	zinc ABC transporter substrate-binding protein AdcA	NA	NA	NA	NA	NA
WP_002413934.1|2917842_2918817_-|tRNA	tRNA-dihydrouridine synthase	tRNA	NA	NA	NA	NA
WP_002354811.1|2919005_2919776_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002354809.1|2919768_2920704_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.4	2.4e-22
WP_002354802.1|2920961_2921381_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002354800.1|2921393_2921885_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002365419.1|2921901_2922717_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA	NA
WP_002358979.1|2922713_2923541_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002358978.1|2923688_2926208_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA	NA
WP_002354788.1|2926354_2926915_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002354786.1|2927093_2927486_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_002365424.1|2927499_2927943_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_002354782.1|2928164_2928632_-	DNA starvation/stationary phase protection protein	NA	C1KFH1	Lactobacillus_virus	25.9	1.0e-05
WP_002358977.1|2928759_2929479_-	DUF5105 domain-containing protein	NA	NA	NA	NA	NA
WP_002358976.1|2929562_2931083_-	gluconokinase	NA	NA	NA	NA	NA
WP_002358975.1|2931191_2931884_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_002354777.1|2931933_2935587_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.8	1.4e-65
WP_002389470.1|2935753_2939368_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.5	2.0e-48
WP_002354774.1|2939738_2940080_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5SAB3	Streptococcus_phage	42.5	5.5e-17
WP_002354773.1|2940079_2940310_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002358974.1|2940716_2940932_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_002358973.1|2941070_2942063_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_002358972.1|2942129_2942762_-	RloB domain-containing protein	NA	NA	NA	NA	NA
WP_002396787.1|2942770_2944066_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_002358967.1|2944527_2946144_+	phosphatase PAP2/LCP family protein	NA	NA	NA	NA	NA
WP_002404776.1|2946498_2946621_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_002358966.1|2946806_2947004_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_077143780.1|2947122_2947263_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_002396786.1|2947493_2947637_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
>prophage 13
NZ_CP031027	Enterococcus faecalis strain TY1 isolate flatfish chromosome, complete genome	3065679	3031188	3048726	3065679	integrase	Streptococcus_phage(100.0%)	20	3026165:3026179	3054976:3054990
3026165:3026179	attL	TTTCTTTTTCTGTTG	NA	NA	NA	NA
WP_000420682.1|3031188_3031503_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|3031518_3031905_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|3031933_3033319_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|3033321_3033474_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|3033496_3034702_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|3034744_3034966_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|3035082_3035580_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|3035554_3036061_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|3036044_3038492_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000804748.1|3038494_3040672_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000769868.1|3040668_3041670_+	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224318.1|3041666_3042599_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_001814923.1|3042843_3042960_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_000691736.1|3042975_3044895_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.5	0.0e+00
WP_000336323.1|3045013_3045181_+	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_001227347.1|3045240_3045594_-	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000804885.1|3046098_3046521_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_114679434.1|3046517_3046763_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	93.8	2.7e-34
WP_000814511.1|3047223_3047427_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|3047508_3048726_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
3054976:3054990	attR	TTTCTTTTTCTGTTG	NA	NA	NA	NA
>prophage 1
NZ_CP031028	Enterococcus faecalis strain TY1 isolate flatfish plasmid pDEF-1, complete sequence	75758	492	29252	75758	protease,transposase	Streptococcus_phage(85.0%)	37	NA	NA
WP_001038792.1|492_1230_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.2	7.0e-134
WP_000567888.1|2523_2769_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_000228166.1|2871_3741_+	nucleotidyltransferase domain-containing protein	NA	A0A1X9I6C9	Streptococcus_phage	95.8	4.3e-159
WP_000662263.1|3721_4456_+	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
WP_001255866.1|4488_5397_+	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	E4ZFP8	Streptococcus_phage	100.0	2.8e-177
WP_000627290.1|5393_5936_+	streptothricin N-acetyltransferase Sat4	NA	A0A1B0RXL7	Streptococcus_phage	100.0	8.9e-94
WP_001096887.1|6028_6823_+	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
WP_001079938.1|7098_7671_+	HTH domain-containing protein	NA	A0A1B0RXM1	Streptococcus_phage	99.5	5.5e-102
WP_002334978.1|7968_8865_+	ParA family protein	NA	A0A1X9I765	Streptococcus_phage	97.2	9.0e-152
WP_114679443.1|8963_9173_+	peptide-binding protein	NA	A0A1X9I6D5	Streptococcus_phage	97.1	1.6e-30
WP_002331065.1|9189_9462_+	antitoxin	NA	A0A1X9I6E5	Streptococcus_phage	96.7	5.4e-07
WP_010708525.1|9463_9859_+	zeta toxin family protein	NA	NA	NA	NA	NA
WP_001015311.1|9886_10567_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	1.5e-127
WP_010708530.1|10600_10852_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002383592.1|10894_11563_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002387529.1|11693_12707_-	replication initiator protein A	NA	NA	NA	NA	NA
WP_002360663.1|12966_13323_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002369746.1|13315_14098_-	ParA family protein	NA	H7BUL8	unidentified_phage	32.8	3.8e-21
WP_114679444.1|14351_14642_-	type III secretion system protein PrgN	NA	NA	NA	NA	NA
WP_000191454.1|14665_15346_-|transposase	IS6-like element ISEnfa1 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	88.5	3.7e-113
WP_048951333.1|15384_16032_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	96.2	1.9e-114
WP_012881081.1|16408_16495_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_048951333.1|17229_17877_+|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	96.2	1.9e-114
WP_000191454.1|17915_18596_+|transposase	IS6-like element ISEnfa1 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	88.5	3.7e-113
WP_000242080.1|18792_19623_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000933358.1|19622_20372_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002346952.1|20364_21282_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	43.2	4.6e-42
WP_000395511.1|21464_22079_-	helix-turn-helix transcriptional regulator	NA	A0A139ZPI6	Marinitoga_camini_virus	46.8	5.5e-07
WP_002387760.1|22068_22395_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_001808810.1|22431_22596_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000191454.1|22634_23315_+|transposase	IS6-like element ISEnfa1 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	88.5	3.7e-113
WP_107196852.1|23857_23944_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_002364281.1|24462_24663_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085407408.1|24751_26512_-	plasmid recombination protein	NA	NA	NA	NA	NA
WP_002360723.1|27208_27505_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002360724.1|27631_28354_-	replication initiation protein	NA	NA	NA	NA	NA
WP_000191454.1|28571_29252_+|transposase	IS6-like element ISEnfa1 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	88.5	3.7e-113
>prophage 1
NZ_CP031029	Enterococcus faecalis strain TY1 isolate flatfish plasmid pDEF-2, complete sequence	58791	51096	58420	58791	transposase	Streptococcus_phage(66.67%)	7	NA	NA
WP_001015311.1|51096_51777_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	1.5e-127
WP_025193054.1|51810_52155_-	protein rep	NA	NA	NA	NA	NA
WP_001015311.1|52560_53241_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	1.5e-127
WP_000393259.1|54258_54651_+	GNAT family N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	6.9e-72
WP_001028144.1|54651_56091_+	aminoglycoside O-phosphotransferase APH(2'')-Ia	NA	A0A1X9I6C2	Streptococcus_phage	100.0	3.8e-285
WP_000195429.1|56220_57393_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_001015311.1|57739_58420_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	1.5e-127
