assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003319215.1_ASM331921v1	NZ_CP030845	Streptococcus agalactiae strain S73 chromosome, complete genome	1	509317-510009	1,1,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,cas9,csn2,csm6,DEDDh,WYL,csa3	Type I-C,Type I-U, Type I-U?	GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT,GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT,GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT,GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT	32,32,32,32	0	0	NA	NA	I-C:I-C:I-C:I-C	8,9,10,8	10	TypeI-C,TypeI-U,TypeI-U?	cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,cas9,csn2,csm6,DEDDh,WYL,csa3	NA|231aa|up_9|NZ_CP030845.1_495764_496457_+,NA|260aa|up_7|NZ_CP030845.1_499347_500127_-,NA|97aa|down_6|NZ_CP030845.1_515672_515963_+	NA|231aa|up_9|NZ_CP030845.1_495764_496457_+	NA	NA|884aa|up_8|NZ_CP030845.1_496478_499130_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|260aa|up_7|NZ_CP030845.1_499347_500127_-	NA	cas3|808aa|up_6|NZ_CP030845.1_501138_503562_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|243aa|up_5|NZ_CP030845.1_503694_504423_+	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas8c|632aa|up_4|NZ_CP030845.1_504422_506318_+	cd09642, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|283aa|up_3|NZ_CP030845.1_506322_507171_+	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas4|224aa|up_2|NZ_CP030845.1_507172_507844_+	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense    mechanisms]	cas1|342aa|up_1|NZ_CP030845.1_507840_508866_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|98aa|up_0|NZ_CP030845.1_508876_509170_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|320aa|down_0|NZ_CP030845.1_510145_511105_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|301aa|down_1|NZ_CP030845.1_511265_512168_+	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family	NA|355aa|down_2|NZ_CP030845.1_512327_513392_+	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|331aa|down_3|NZ_CP030845.1_513504_514497_+	COG2502, AsnA, Asparagine synthetase A [Amino acid transport and metabolism]	NA|150aa|down_4|NZ_CP030845.1_514541_514991_-	TIGR01295, Pediocin_PA-1_biosynthesis_protein_PedC, bacteriocin transport accessory protein, putative	NA|180aa|down_5|NZ_CP030845.1_515121_515661_+	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95	NA|97aa|down_6|NZ_CP030845.1_515672_515963_+	NA	NA|162aa|down_7|NZ_CP030845.1_515959_516445_+	cd02163, PPAT, Phosphopantetheine adenylyltransferase	NA|358aa|down_8|NZ_CP030845.1_516434_517508_+	COG3480, SdrC, Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms]	NA|445aa|down_9|NZ_CP030845.1_517582_518917_+	cd00845, MPP_UshA_N_like, Escherichia coli UshA-like family, N-terminal metallophosphatase domain
GCF_003319215.1_ASM331921v1	NZ_CP030845	Streptococcus agalactiae strain S73 chromosome, complete genome	2	911537-911638	2	CRISPRCasFinder	no	cas9,cas1,cas2,csn2	cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,cas9,csn2,csm6,DEDDh,WYL,csa3	Type II-A,Type II-C,Type II-B	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	36	0	0	NA	NA	II-A	1	1	TypeII-A,TypeII-C,TypeII-B	cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,cas9,csn2,csm6,DEDDh,WYL,csa3	NA,NA|87aa|down_0|NZ_CP030845.1_911690_911951_+	NA|124aa|up_9|NZ_CP030845.1_900918_901290_+	pfam08349, DUF1722, Protein of unknown function (DUF1722)	NA|127aa|up_8|NZ_CP030845.1_901314_901695_+	TIGR02328, TIGR02328, conserved hypothetical protein	NA|377aa|up_7|NZ_CP030845.1_901786_902917_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|246aa|up_6|NZ_CP030845.1_902920_903658_+	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|257aa|up_5|NZ_CP030845.1_903658_904429_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|219aa|up_4|NZ_CP030845.1_904418_905075_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	cas9|1371aa|up_3|NZ_CP030845.1_905462_909575_+	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	cas1|290aa|up_2|NZ_CP030845.1_909576_910446_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|114aa|up_1|NZ_CP030845.1_910442_910784_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|222aa|up_0|NZ_CP030845.1_910770_911436_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|87aa|down_0|NZ_CP030845.1_911690_911951_+	NA	NA|139aa|down_1|NZ_CP030845.1_912261_912678_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|611aa|down_2|NZ_CP030845.1_912813_914646_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|878aa|down_3|NZ_CP030845.1_914892_917526_+	NF033189, internalin_A, class 1 internalin InlA	NA|220aa|down_4|NZ_CP030845.1_917625_918285_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|155aa|down_5|NZ_CP030845.1_918293_918758_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|130aa|down_6|NZ_CP030845.1_918757_919147_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|931aa|down_7|NZ_CP030845.1_919298_922091_+	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|368aa|down_8|NZ_CP030845.1_922090_923194_+	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|213aa|down_9|NZ_CP030845.1_923314_923953_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others
GCF_003319215.1_ASM331921v1	NZ_CP030845	Streptococcus agalactiae strain S73 chromosome, complete genome	3	1950879-1950965	3	CRISPRCasFinder	no	csa3	cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,cas9,csn2,csm6,DEDDh,WYL,csa3	Type I-A	AGCAGTATCGTACTTAGTTTGAGC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,cas9,csn2,csm6,DEDDh,WYL,csa3	NA|154aa|up_0|NZ_CP030845.1_1949533_1949995_-,NA|319aa|down_1|NZ_CP030845.1_1953384_1954341_-,NA|98aa|down_2|NZ_CP030845.1_1954575_1954869_+,NA|147aa|down_3|NZ_CP030845.1_1954950_1955391_+,NA|177aa|down_4|NZ_CP030845.1_1955387_1955918_+,NA|424aa|down_6|NZ_CP030845.1_1956827_1958099_+,NA|88aa|down_7|NZ_CP030845.1_1958181_1958445_+,NA|62aa|down_9|NZ_CP030845.1_1960011_1960197_-	NA|146aa|up_9|NZ_CP030845.1_1940874_1941312_-	TIGR01529, Arginine_repressor	NA|564aa|up_8|NZ_CP030845.1_1941533_1943225_+	PRK12451, PRK12451, arginyl-tRNA synthetase; Reviewed	NA|103aa|up_7|NZ_CP030845.1_1943312_1943621_+	pfam08951, EntA_Immun, Enterocin A Immunity	NA|291aa|up_6|NZ_CP030845.1_1943647_1944520_-	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|315aa|up_5|NZ_CP030845.1_1944627_1945572_-	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|584aa|up_4|NZ_CP030845.1_1945561_1947313_-	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|427aa|up_3|NZ_CP030845.1_1947405_1948686_-	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed	NA|61aa|up_2|NZ_CP030845.1_1948905_1949088_+	PRK01110, rpmF, 50S ribosomal protein L32; Validated	NA|50aa|up_1|NZ_CP030845.1_1949103_1949253_+	PRK00595, rpmG, 50S ribosomal protein L33; Validated	NA|154aa|up_0|NZ_CP030845.1_1949533_1949995_-	NA	NA|112aa|down_0|NZ_CP030845.1_1953012_1953348_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|319aa|down_1|NZ_CP030845.1_1953384_1954341_-	NA	NA|98aa|down_2|NZ_CP030845.1_1954575_1954869_+	NA	NA|147aa|down_3|NZ_CP030845.1_1954950_1955391_+	NA	NA|177aa|down_4|NZ_CP030845.1_1955387_1955918_+	NA	NA|249aa|down_5|NZ_CP030845.1_1955917_1956664_+	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|424aa|down_6|NZ_CP030845.1_1956827_1958099_+	NA	NA|88aa|down_7|NZ_CP030845.1_1958181_1958445_+	NA	NA|422aa|down_8|NZ_CP030845.1_1958541_1959807_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|62aa|down_9|NZ_CP030845.1_1960011_1960197_-	NA
