assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003294855.1_ASM329485v1	NZ_CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	1	1368282-1368409	1	CRISPRCasFinder	no		DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	Orphan	AACATCAGCTGCCGATAAAGCGGTAGCCGATGCCGG	36	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	NA|78aa|up_2|NZ_CP025705.1_1366073_1366307_+,NA|767aa|down_4|NZ_CP025705.1_1377119_1379420_-,NA|381aa|down_5|NZ_CP025705.1_1379395_1380538_-	NA|368aa|up_9|NZ_CP025705.1_1357841_1358945_+	PRK00064, recF, recombination protein F; Reviewed	NA|804aa|up_8|NZ_CP025705.1_1358941_1361353_+	PRK14939, gyrB, DNA gyrase subunit B; Provisional	NA|322aa|up_7|NZ_CP025705.1_1361450_1362416_-	PRK09393, ftrA, transcriptional activator FtrA; Provisional	NA|254aa|up_6|NZ_CP025705.1_1362501_1363263_-	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	NA|138aa|up_5|NZ_CP025705.1_1363519_1363933_+	PRK10743, PRK10743, heat shock chaperone IbpA	NA|147aa|up_4|NZ_CP025705.1_1364025_1364466_+	PRK10743, PRK10743, heat shock chaperone IbpA	NA|417aa|up_3|NZ_CP025705.1_1364539_1365790_-	PRK09440, avtA, valine--pyruvate transaminase; Provisional	NA|78aa|up_2|NZ_CP025705.1_1366073_1366307_+	NA	NA|275aa|up_1|NZ_CP025705.1_1366236_1367061_-	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|376aa|up_0|NZ_CP025705.1_1367153_1368281_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|863aa|down_0|NZ_CP025705.1_1369099_1371688_-	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|176aa|down_1|NZ_CP025705.1_1371790_1372318_-	pfam02669, KdpC, K+-transporting ATPase, c chain	NA|686aa|down_2|NZ_CP025705.1_1372476_1374534_-	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB	NA|561aa|down_3|NZ_CP025705.1_1374589_1376272_-	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional	NA|767aa|down_4|NZ_CP025705.1_1377119_1379420_-	NA	NA|381aa|down_5|NZ_CP025705.1_1379395_1380538_-	NA	NA|450aa|down_6|NZ_CP025705.1_1380995_1382345_-	PRK06116, PRK06116, glutathione reductase; Validated	NA|653aa|down_7|NZ_CP025705.1_1382421_1384380_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|1027aa|down_8|NZ_CP025705.1_1384500_1387581_-	PRK09579, PRK09579, multidrug efflux RND transporter permease subunit	NA|369aa|down_9|NZ_CP025705.1_1387596_1388703_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit
GCF_003294855.1_ASM329485v1	NZ_CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	2	1658446-1658540	2	CRISPRCasFinder	no		DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	Orphan	GCCTTATCCGTGTTCAAACATCCGGAACAG	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	NA,NA	NA|605aa|up_9|NZ_CP025705.1_1646245_1648060_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|223aa|up_8|NZ_CP025705.1_1648282_1648951_+	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	NA|318aa|up_7|NZ_CP025705.1_1648950_1649904_+	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional	NA|285aa|up_6|NZ_CP025705.1_1650356_1651211_+	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed	NA|220aa|up_5|NZ_CP025705.1_1651338_1651998_+	cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|235aa|up_4|NZ_CP025705.1_1652008_1652713_+	TIGR02018, Histidine_utilization_repressor, histidine utilization repressor, proteobacterial	NA|412aa|up_3|NZ_CP025705.1_1652869_1654105_+	PRK09356, PRK09356, imidazolonepropionase; Validated	NA|313aa|up_2|NZ_CP025705.1_1654097_1655036_+	PRK13776, PRK13776, formimidoylglutamase; Provisional	NA|568aa|up_1|NZ_CP025705.1_1655081_1656785_+	PRK05414, PRK05414, urocanate hydratase; Provisional	NA|511aa|up_0|NZ_CP025705.1_1656786_1658319_+	PRK09367, PRK09367, histidine ammonia-lyase; Provisional	NA|512aa|down_0|NZ_CP025705.1_1659762_1661298_-	cd01948, EAL, EAL domain	NA|640aa|down_1|NZ_CP025705.1_1661811_1663731_+	PRK11059, PRK11059, regulatory protein CsrD; Provisional	NA|305aa|down_2|NZ_CP025705.1_1663727_1664642_-	COG2515, Acd, 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]	NA|288aa|down_3|NZ_CP025705.1_1664762_1665626_+	COG4972, PilM, Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]	NA|198aa|down_4|NZ_CP025705.1_1665625_1666219_+	pfam05137, PilN, Fimbrial assembly protein (PilN)	NA|216aa|down_5|NZ_CP025705.1_1666218_1666866_+	pfam04612, T2SSM, Type II secretion system (T2SS), protein M	NA|101aa|down_6|NZ_CP025705.1_1666921_1667224_+	TIGR02500, Yop_proteins_translocation_protein_D, type III secretion apparatus protein, YscD/HrpQ family	NA|559aa|down_7|NZ_CP025705.1_1667294_1668971_+	TIGR02519, related_to_type_II_protein_secretion_protein, pilus (MSHA type) biogenesis protein MshL	NA|379aa|down_8|NZ_CP025705.1_1670008_1671145_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|571aa|down_9|NZ_CP025705.1_1671219_1672932_+	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]
GCF_003294855.1_ASM329485v1	NZ_CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	3	1674169-1674267	3	CRISPRCasFinder	no		DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	Orphan	GGGACATGATGCGGGCCGTGCGGGG	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	NA,NA|154aa|down_0|NZ_CP025705.1_1674278_1674740_+	NA|512aa|up_9|NZ_CP025705.1_1659762_1661298_-	cd01948, EAL, EAL domain	NA|640aa|up_8|NZ_CP025705.1_1661811_1663731_+	PRK11059, PRK11059, regulatory protein CsrD; Provisional	NA|305aa|up_7|NZ_CP025705.1_1663727_1664642_-	COG2515, Acd, 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]	NA|288aa|up_6|NZ_CP025705.1_1664762_1665626_+	COG4972, PilM, Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]	NA|198aa|up_5|NZ_CP025705.1_1665625_1666219_+	pfam05137, PilN, Fimbrial assembly protein (PilN)	NA|216aa|up_4|NZ_CP025705.1_1666218_1666866_+	pfam04612, T2SSM, Type II secretion system (T2SS), protein M	NA|101aa|up_3|NZ_CP025705.1_1666921_1667224_+	TIGR02500, Yop_proteins_translocation_protein_D, type III secretion apparatus protein, YscD/HrpQ family	NA|559aa|up_2|NZ_CP025705.1_1667294_1668971_+	TIGR02519, related_to_type_II_protein_secretion_protein, pilus (MSHA type) biogenesis protein MshL	NA|379aa|up_1|NZ_CP025705.1_1670008_1671145_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|571aa|up_0|NZ_CP025705.1_1671219_1672932_+	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]	NA|154aa|down_0|NZ_CP025705.1_1674278_1674740_+	NA	NA|220aa|down_1|NZ_CP025705.1_1674817_1675477_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|146aa|down_2|NZ_CP025705.1_1675495_1675933_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|160aa|down_3|NZ_CP025705.1_1675993_1676473_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|192aa|down_4|NZ_CP025705.1_1676459_1677035_+	COG4967, PilV, Tfp pilus assembly protein PilV [Cell motility and secretion / Intracellular trafficking and secretion]	NA|286aa|down_5|NZ_CP025705.1_1677034_1677892_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|149aa|down_6|NZ_CP025705.1_1677902_1678349_+	COG4726, PilX, Tfp pilus assembly protein PilX [Cell motility and secretion / Intracellular trafficking and secretion]	NA|1453aa|down_7|NZ_CP025705.1_1678374_1682733_+	cd06900, lectin_VcfQ, VcfQ bacterial pilus biogenesis protein, lectin domain	NA|347aa|down_8|NZ_CP025705.1_1682949_1683990_+	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional	NA|303aa|down_9|NZ_CP025705.1_1684031_1684940_+	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional
GCF_003294855.1_ASM329485v1	NZ_CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	4	1721503-1721616	4	CRISPRCasFinder	no		DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	Orphan	CCGGCTCGCCATGAGCCTGATGGATCTCAAGAGCGG	36	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	NA|163aa|up_9|NZ_CP025705.1_1710279_1710768_+,NA	NA|163aa|up_9|NZ_CP025705.1_1710279_1710768_+	NA	NA|664aa|up_8|NZ_CP025705.1_1711201_1713193_+	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|536aa|up_7|NZ_CP025705.1_1713189_1714797_+	PRK03512, PRK03512, thiamine phosphate synthase	NA|260aa|up_6|NZ_CP025705.1_1714786_1715566_+	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA	NA|67aa|up_5|NZ_CP025705.1_1715568_1715769_+	cd00565, Ubl_ThiS, ubiquitin-like (Ubl) domain found in sulfur carrier protein ThiS	NA|256aa|up_4|NZ_CP025705.1_1715854_1716622_+	PRK00208, thiG, thiazole synthase; Reviewed	NA|364aa|up_3|NZ_CP025705.1_1716797_1717889_+	PRK09240, thiH, 2-iminoacetate synthase ThiH	NA|138aa|up_2|NZ_CP025705.1_1719014_1719428_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|146aa|up_1|NZ_CP025705.1_1719584_1720022_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|211aa|up_0|NZ_CP025705.1_1720138_1720771_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|213aa|down_0|NZ_CP025705.1_1722944_1723583_-	COG3932, COG3932, Uncharacterized ABC-type transport system, permease components [General function prediction only]	NA|102aa|down_1|NZ_CP025705.1_1724410_1724716_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|119aa|down_2|NZ_CP025705.1_1724837_1725194_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|346aa|down_3|NZ_CP025705.1_1725165_1726203_-	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only]	NA|207aa|down_4|NZ_CP025705.1_1726379_1727000_-	COG3295, COG3295, Uncharacterized protein conserved in bacteria [Function unknown]	NA|681aa|down_5|NZ_CP025705.1_1727065_1729108_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|161aa|down_6|NZ_CP025705.1_1729379_1729862_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|246aa|down_7|NZ_CP025705.1_1730331_1731069_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|353aa|down_8|NZ_CP025705.1_1731128_1732187_-	COG3203, OmpC, Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane]	NA|337aa|down_9|NZ_CP025705.1_1732405_1733416_+	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed
GCF_003294855.1_ASM329485v1	NZ_CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	5	1826186-1826386	1	PILER-CR	no		DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	Orphan	CTTAGCTCAGTCGGTAGAGCAACGGACTGATAATCCCC	38	0	0	NA	NA	NA	2	2	Orphan	DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	NA,NA|176aa|down_1|NZ_CP025705.1_1828371_1828899_+	NA|524aa|up_9|NZ_CP025705.1_1816331_1817903_+	cd01948, EAL, EAL domain	NA|306aa|up_8|NZ_CP025705.1_1817899_1818817_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|206aa|up_7|NZ_CP025705.1_1818893_1819511_+	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein	NA|469aa|up_6|NZ_CP025705.1_1819626_1821033_+	pfam04030, ALO, D-arabinono-1,4-lactone oxidase	NA|376aa|up_5|NZ_CP025705.1_1821103_1822231_+	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|463aa|up_4|NZ_CP025705.1_1822292_1823681_+	PRK10504, PRK10504, putative transporter; Provisional	NA|161aa|up_3|NZ_CP025705.1_1823690_1824173_-	cd04332, YbaK_like, YbaK-like	NA|170aa|up_2|NZ_CP025705.1_1824290_1824800_-	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]	NA|124aa|up_1|NZ_CP025705.1_1824799_1825171_-	COG1539, FolB, Dihydroneopterin aldolase [Coenzyme metabolism]	NA|221aa|up_0|NZ_CP025705.1_1825342_1826005_+	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY	NA|160aa|down_0|NZ_CP025705.1_1827728_1828208_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|176aa|down_1|NZ_CP025705.1_1828371_1828899_+	NA	NA|533aa|down_2|NZ_CP025705.1_1828908_1830507_+	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter	NA|852aa|down_3|NZ_CP025705.1_1830577_1833133_-	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|431aa|down_4|NZ_CP025705.1_1833345_1834638_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|384aa|down_5|NZ_CP025705.1_1834848_1835999_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|366aa|down_6|NZ_CP025705.1_1836123_1837221_-	COG4469, CoiA, Competence protein CoiA-like family, contains a predicted nuclease    domain [General function prediction only]	NA|626aa|down_7|NZ_CP025705.1_1837506_1839384_+	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|450aa|down_8|NZ_CP025705.1_1839373_1840723_+	cd17267, RMtype1_S_EcoAO83I-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S	NA|684aa|down_9|NZ_CP025705.1_1840719_1842771_+	PRK11331, PRK11331, 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional
GCF_003294855.1_ASM329485v1	NZ_CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	6	2358935-2359029	5	CRISPRCasFinder	no		DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	Orphan	TGAGCTGCTTTATGGCGTGCGACCCAC	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	NA|289aa|up_8|NZ_CP025705.1_2346115_2346982_-,NA|112aa|up_7|NZ_CP025705.1_2347080_2347416_-,NA	NA|468aa|up_9|NZ_CP025705.1_2344642_2346046_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|289aa|up_8|NZ_CP025705.1_2346115_2346982_-	NA	NA|112aa|up_7|NZ_CP025705.1_2347080_2347416_-	NA	NA|113aa|up_6|NZ_CP025705.1_2347531_2347870_-	pfam11169, DUF2956, Protein of unknown function (DUF2956)	NA|557aa|up_5|NZ_CP025705.1_2348118_2349789_+	PRK09558, ushA, bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed	NA|285aa|up_4|NZ_CP025705.1_2349982_2350837_-	COG4395, COG4395, Uncharacterized protein conserved in bacteria [Function unknown]	NA|465aa|up_3|NZ_CP025705.1_2351258_2352653_+	PRK08840, PRK08840, replicative DNA helicase; Provisional	NA|358aa|up_2|NZ_CP025705.1_2352791_2353865_+	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases	NA|1316aa|up_1|NZ_CP025705.1_2354022_2357970_-	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|146aa|up_0|NZ_CP025705.1_2358369_2358807_+	cd06588, PhnB_like, Escherichia coli PhnB and similar proteins	NA|143aa|down_0|NZ_CP025705.1_2360525_2360954_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|356aa|down_1|NZ_CP025705.1_2360991_2362059_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|513aa|down_2|NZ_CP025705.1_2362060_2363599_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|243aa|down_3|NZ_CP025705.1_2363665_2364394_-	PRK05282, PRK05282, dipeptidase PepE	NA|204aa|down_4|NZ_CP025705.1_2364514_2365126_-	COG4566, TtrR, Response regulator [Signal transduction mechanisms]	NA|640aa|down_5|NZ_CP025705.1_2365127_2367047_-	pfam12974, Phosphonate-bd, ABC transporter, phosphonate, periplasmic substrate-binding protein	NA|263aa|down_6|NZ_CP025705.1_2367304_2368093_+	PRK14993, PRK14993, tetrathionate reductase subunit TtrB	NA|369aa|down_7|NZ_CP025705.1_2368082_2369189_+	PRK14992, PRK14992, tetrathionate reductase subunit TtrC	NA|1036aa|down_8|NZ_CP025705.1_2369188_2372296_+	PRK14991, PRK14991, tetrathionate reductase subunit TtrA	NA|422aa|down_9|NZ_CP025705.1_2372352_2373618_-	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family
GCF_003294855.1_ASM329485v1	NZ_CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	7	2618197-2618291	6	CRISPRCasFinder	no		DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	Orphan	CGTAGCCCTGTACTTGGCTTAAGGTGTCAC	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	NA|196aa|up_9|NZ_CP025705.1_2602339_2602927_-,NA|69aa|up_0|NZ_CP025705.1_2617815_2618022_-,NA|317aa|down_0|NZ_CP025705.1_2618308_2619259_+,NA|76aa|down_1|NZ_CP025705.1_2620008_2620236_+	NA|196aa|up_9|NZ_CP025705.1_2602339_2602927_-	NA	NA|89aa|up_8|NZ_CP025705.1_2603185_2603452_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|454aa|up_7|NZ_CP025705.1_2603647_2605009_+	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain	NA|290aa|up_6|NZ_CP025705.1_2605074_2605944_-	PRK10279, PRK10279, patatin-like phospholipase RssA	NA|519aa|up_5|NZ_CP025705.1_2605978_2607535_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|351aa|up_4|NZ_CP025705.1_2607745_2608798_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1051aa|up_3|NZ_CP025705.1_2608797_2611950_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|806aa|up_2|NZ_CP025705.1_2612146_2614564_+	PRK01254, PRK01254, YgiQ family radical SAM protein	NA|875aa|up_1|NZ_CP025705.1_2614672_2617297_-	pfam00931, NB-ARC, NB-ARC domain	NA|69aa|up_0|NZ_CP025705.1_2617815_2618022_-	NA	NA|317aa|down_0|NZ_CP025705.1_2618308_2619259_+	NA	NA|76aa|down_1|NZ_CP025705.1_2620008_2620236_+	NA	NA|303aa|down_2|NZ_CP025705.1_2620519_2621428_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|174aa|down_3|NZ_CP025705.1_2621661_2622183_+	PRK00039, ruvC, Holliday junction resolvase; Reviewed	NA|229aa|down_4|NZ_CP025705.1_2622476_2623163_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|247aa|down_5|NZ_CP025705.1_2623859_2624600_-	cd00254, LT-like, lytic transglycosylase(LT)-like domain	NA|153aa|down_6|NZ_CP025705.1_2624924_2625383_+	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|195aa|down_7|NZ_CP025705.1_2625387_2625972_-	pfam07273, DUF1439, Protein of unknown function (DUF1439)	NA|494aa|down_8|NZ_CP025705.1_2626026_2627508_+	PRK01642, cls, cardiolipin synthetase; Reviewed	NA|423aa|down_9|NZ_CP025705.1_2627617_2628886_+	pfam06097, DUF945, Bacterial protein of unknown function (DUF945)
GCF_003294855.1_ASM329485v1	NZ_CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	8	2638665-2639232	7,1,2	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	Orphan	TTTCTGAGCTGCCTGTGCGGCAGCGAGG,TTTCTGAGCTGCCTGTGCGGCAGCGAGG,TTTCTGAGCTGCCTGTGCGGCAGCGAGG	28,28,28	0	0	NA	NA	I-F:I-F:I-F	9,9,8	9	Orphan	DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	NA,NA|161aa|down_4|NZ_CP025705.1_2643664_2644147_-	NA|279aa|up_9|NZ_CP025705.1_2628944_2629781_-	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|218aa|up_8|NZ_CP025705.1_2630252_2630906_+	PRK03353, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional	NA|81aa|up_7|NZ_CP025705.1_2631131_2631374_+	PRK15396, PRK15396, major outer membrane lipoprotein	NA|283aa|up_6|NZ_CP025705.1_2631516_2632365_-	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]	NA|241aa|up_5|NZ_CP025705.1_2632361_2633084_-	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism]	NA|163aa|up_4|NZ_CP025705.1_2633360_2633849_+	PRK10838, spr, bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	NA|316aa|up_3|NZ_CP025705.1_2634000_2634948_+	PRK11727, PRK11727, 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF	NA|242aa|up_2|NZ_CP025705.1_2635184_2635910_+	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit	NA|331aa|up_1|NZ_CP025705.1_2635973_2636966_-	pfam04338, DUF481, Protein of unknown function, DUF481	NA|306aa|up_0|NZ_CP025705.1_2636979_2637897_-	PRK10190, PRK10190, L,D-transpeptidase; Provisional	NA|338aa|down_0|NZ_CP025705.1_2639448_2640462_-	PRK15417, PRK15417, integron integrase	NA|284aa|down_1|NZ_CP025705.1_2640563_2641415_+	PRK13753, PRK13753, dihydropteroate synthase; Provisional	NA|167aa|down_2|NZ_CP025705.1_2641542_2642043_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|255aa|down_3|NZ_CP025705.1_2642549_2643314_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|161aa|down_4|NZ_CP025705.1_2643664_2644147_-	NA	NA|662aa|down_5|NZ_CP025705.1_2644130_2646116_-	PRK13876, PRK13876, conjugal transfer coupling protein TraG; Provisional	NA|328aa|down_6|NZ_CP025705.1_2646247_2647231_-	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold	NA|405aa|down_7|NZ_CP025705.1_2647258_2648473_-	TIGR00710, Bicyclomycin_resistance_protein_homolog, drug resistance transporter, Bcr/CflA subfamily	NA|374aa|down_8|NZ_CP025705.1_2648689_2649811_-	pfam11843, DUF3363, Protein of unknown function (DUF3363)	NA|418aa|down_9|NZ_CP025705.1_2650829_2652083_-	pfam00872, Transposase_mut, Transposase, Mutator family
GCF_003294855.1_ASM329485v1	NZ_CP025705	Aeromonas caviae strain R25-6 chromosome, complete genome	9	2660898-2664705	3,8,2,4	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL	DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	Type I-F	TTTTCTGAGCTGCCTGTGCGGCAGCGAGG,TTTCTGAGCTGCCTGTGCGGCAGCGAGG,TTTCTGAGCTGCCTGTGCGGCAGCGAGG,TTTCTGAGCTGCCTGTGCGGCAGCGAGG	29,28,28,28	0	0	NA	NA	I-F:I-F:I-F:I-F	61,63,63,61	63	TypeI-F	DEDDh,WYL,cas3,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,c2c9_V-U4,DinG,RT	NA,NA|119aa|down_7|NZ_CP025705.1_2674476_2674833_-,NA|181aa|down_8|NZ_CP025705.1_2674834_2675377_-,NA|88aa|down_9|NZ_CP025705.1_2675449_2675713_-	NA|405aa|up_9|NZ_CP025705.1_2647258_2648473_-	TIGR00710, Bicyclomycin_resistance_protein_homolog, drug resistance transporter, Bcr/CflA subfamily	NA|374aa|up_8|NZ_CP025705.1_2648689_2649811_-	pfam11843, DUF3363, Protein of unknown function (DUF3363)	NA|418aa|up_7|NZ_CP025705.1_2650829_2652083_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|205aa|up_6|NZ_CP025705.1_2654972_2655587_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|268aa|up_5|NZ_CP025705.1_2655652_2656456_+	cd05150, APH, Aminoglycoside 3'-phosphotransferase	NA|279aa|up_4|NZ_CP025705.1_2656455_2657292_+	pfam04655, APH_6_hur, Aminoglycoside/hydroxyurea antibiotic resistance kinase	NA|173aa|up_3|NZ_CP025705.1_2657868_2658387_-	pfam11000, DUF2840, Protein of unknown function (DUF2840)	NA|359aa|up_2|NZ_CP025705.1_2658445_2659522_-	pfam10134, RPA, Replication initiator protein A	NA|90aa|up_1|NZ_CP025705.1_2659522_2659792_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|255aa|up_0|NZ_CP025705.1_2659903_2660668_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas6f|184aa|down_0|NZ_CP025705.1_2664834_2665386_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|345aa|down_1|NZ_CP025705.1_2665395_2666430_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|327aa|down_2|NZ_CP025705.1_2666444_2667425_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|398aa|down_3|NZ_CP025705.1_2667415_2668609_-	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas3f|1096aa|down_4|NZ_CP025705.1_2668996_2672284_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|326aa|down_5|NZ_CP025705.1_2672280_2673258_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	WYL|329aa|down_6|NZ_CP025705.1_2673297_2674284_-	pfam13280, WYL, WYL domain	NA|119aa|down_7|NZ_CP025705.1_2674476_2674833_-	NA	NA|181aa|down_8|NZ_CP025705.1_2674834_2675377_-	NA	NA|88aa|down_9|NZ_CP025705.1_2675449_2675713_-	NA
