assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003287995.1_ASM328799v1	NZ_CP021769	Streptococcus agalactiae strain B509 chromosome, complete genome	1	614659-614904	1	CRT	no		cas3,csa3,WYL,DEDDh,csm6,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	Orphan	CCAGANGCTAANCCAGAA	18	1	1	614737-614766	NZ_CP021769.1_614881-614910	NA	5	5	Orphan	cas3,csa3,WYL,DEDDh,csm6,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	NA,NA|203aa|down_4|NZ_CP021769.1_621084_621693_-	NA|246aa|up_9|NZ_CP021769.1_602170_602908_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|260aa|up_8|NZ_CP021769.1_603066_603846_+	cd17767, UP_EcUdp-like, uridine phosphorylases similar to Escherichia coli Udp and related phosphorylases	NA|401aa|up_7|NZ_CP021769.1_603866_605069_+	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|224aa|up_6|NZ_CP021769.1_605098_605770_+	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|404aa|up_5|NZ_CP021769.1_605836_607048_+	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|547aa|up_4|NZ_CP021769.1_607217_608858_+	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|295aa|up_3|NZ_CP021769.1_608882_609767_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|774aa|up_2|NZ_CP021769.1_609810_612132_+	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|51aa|up_1|NZ_CP021769.1_612180_612333_+	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|58aa|up_0|NZ_CP021769.1_612368_612542_+	COG0690, SecE, Preprotein translocase subunit SecE [Intracellular trafficking and secretion]	NA|180aa|down_0|NZ_CP021769.1_615304_615844_+	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|282aa|down_1|NZ_CP021769.1_615981_616827_+	cd07208, Pat_hypo_Ecoli_yjju_like, Hypothetical patatin similar to yjju protein of Escherichia coli	NA|416aa|down_2|NZ_CP021769.1_616869_618117_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|834aa|down_3|NZ_CP021769.1_618493_620995_+	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|203aa|down_4|NZ_CP021769.1_621084_621693_-	NA	NA|463aa|down_5|NZ_CP021769.1_621785_623174_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|229aa|down_6|NZ_CP021769.1_623170_623857_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|1572aa|down_7|NZ_CP021769.1_624089_628805_-	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases	NA|231aa|down_8|NZ_CP021769.1_629127_629820_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|108aa|down_9|NZ_CP021769.1_629809_630133_+	COG4392, COG4392, Predicted membrane protein [Function unknown]
GCF_003287995.1_ASM328799v1	NZ_CP021769	Streptococcus agalactiae strain B509 chromosome, complete genome	2	1123763-1124890	2	CRT	no		cas3,csa3,WYL,DEDDh,csm6,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	Orphan	NTCANCNAGNNCNAGNNC	18	6	8	1123997-1124026|1123997-1124026|1124045-1124074|1124045-1124074|1124093-1124128|1124267-1124296|1124315-1124332|1124411-1124440	NZ_CP021769.1_1123637-1123666|NZ_CP021769.1_1123685-1123714|NZ_CP021769.1_1123685-1123714|NZ_CP021769.1_1123637-1123666|NZ_CP021769.1_1123733-1123768|NZ_CP021769.1_1123715-1123744|NZ_CP021769.1_1124891-1124908|NZ_CP021769.1_1123463-1123492	NA	19	19	Orphan	cas3,csa3,WYL,DEDDh,csm6,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	NA|117aa|up_5|NZ_CP021769.1_1112723_1113074_-,NA	NA|193aa|up_9|NZ_CP021769.1_1108914_1109493_+	pfam05887, Trypan_PARP, Procyclic acidic repetitive protein (PARP)	NA|414aa|up_8|NZ_CP021769.1_1109526_1110768_-	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29)	NA|43aa|up_7|NZ_CP021769.1_1110945_1111074_+	pfam13253, DUF4044, Protein of unknown function (DUF4044)	NA|438aa|up_6|NZ_CP021769.1_1111134_1112448_+	PRK12297, obgE, GTPase CgtA; Reviewed	NA|117aa|up_5|NZ_CP021769.1_1112723_1113074_-	NA	NA|247aa|up_4|NZ_CP021769.1_1113222_1113963_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|728aa|up_3|NZ_CP021769.1_1113962_1116146_-	cd13619, PBP2_GlnP, Glutamine-binding domain of ABC transporter, a member of the type 2 periplasmic binding fold protein superfamily	NA|307aa|up_2|NZ_CP021769.1_1116328_1117249_+	pfam02517, Abi, CAAX protease self-immunity	NA|664aa|up_1|NZ_CP021769.1_1117309_1119301_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|499aa|up_0|NZ_CP021769.1_1119397_1120894_-	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain	NA|336aa|down_0|NZ_CP021769.1_1125431_1126439_+	PRK09814, PRK09814, sugar transferase	NA|402aa|down_1|NZ_CP021769.1_1126447_1127653_+	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|414aa|down_2|NZ_CP021769.1_1127649_1128891_+	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|395aa|down_3|NZ_CP021769.1_1128880_1130065_+	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|292aa|down_4|NZ_CP021769.1_1130057_1130933_+	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|399aa|down_5|NZ_CP021769.1_1130993_1132190_+	TIGR03728, glyco_access_1, glycosyltransferase, SP_1767 family	NA|515aa|down_6|NZ_CP021769.1_1133541_1135086_+	pfam16993, Asp1, Accessory Sec system protein Asp1	NA|520aa|down_7|NZ_CP021769.1_1135092_1136652_+	TIGR03712, acc_sec_asp2, accessory Sec system protein Asp2	NA|331aa|down_8|NZ_CP021769.1_1136648_1137641_+	TIGR03711, acc_sec_asp3, accessory Sec system protein Asp3	NA|796aa|down_9|NZ_CP021769.1_1137627_1140015_+	TIGR03714, Protein_translocase_subunit_SecA_2, accessory Sec system translocase SecA2
GCF_003287995.1_ASM328799v1	NZ_CP021769	Streptococcus agalactiae strain B509 chromosome, complete genome	3	1643560-1644916	3,1,1,2	CRT,CRISPRCasFinder,PILER-CR,PILER-CR	no	csn2,cas2,cas1,cas9	cas3,csa3,WYL,DEDDh,csm6,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	Type II-A,Type II-B,Type II-C	GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC,GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAACA,GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC,GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC	36,37,36,36	2	2	1644454-1644483|1644455-1644483	NZ_CP021769.1_231610-231581|NZ_CP021769.1_231609-231581	II-A:II-A:II-A:II-A	20,19,16,16	20	TypeII-A,TypeII-B,TypeII-C	cas3,csa3,WYL,DEDDh,csm6,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	NA,NA	NA|203aa|up_9|NZ_CP021769.1_1629948_1630557_-	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|213aa|up_8|NZ_CP021769.1_1631267_1631906_+	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|368aa|up_7|NZ_CP021769.1_1632026_1633130_-	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|931aa|up_6|NZ_CP021769.1_1633129_1635922_-	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|145aa|up_5|NZ_CP021769.1_1636073_1636508_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|155aa|up_4|NZ_CP021769.1_1636507_1636972_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|220aa|up_3|NZ_CP021769.1_1636980_1637640_-	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|873aa|up_2|NZ_CP021769.1_1637739_1640358_-	NF033189, internalin_A, class 1 internalin InlA	NA|611aa|up_1|NZ_CP021769.1_1640618_1642451_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|139aa|up_0|NZ_CP021769.1_1642586_1643003_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	csn2|222aa|down_0|NZ_CP021769.1_1645015_1645681_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|114aa|down_1|NZ_CP021769.1_1645667_1646009_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|290aa|down_2|NZ_CP021769.1_1646005_1646875_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1371aa|down_3|NZ_CP021769.1_1646876_1650989_-	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	NA|219aa|down_4|NZ_CP021769.1_1651376_1652033_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|257aa|down_5|NZ_CP021769.1_1652022_1652793_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|246aa|down_6|NZ_CP021769.1_1652793_1653531_-	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|377aa|down_7|NZ_CP021769.1_1653534_1654665_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|127aa|down_8|NZ_CP021769.1_1654756_1655137_-	TIGR02328, TIGR02328, conserved hypothetical protein	NA|124aa|down_9|NZ_CP021769.1_1655161_1655533_-	pfam08349, DUF1722, Protein of unknown function (DUF1722)
