assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	1	109428-110107	1	CRT	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGNNNCCNCCGTNGCCGCC	23	0	0	NA	NA	NA	9	9	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|94aa|up_0|NZ_CP019611.1_106833_107115_+,NA|96aa|down_4|NZ_CP019611.1_124148_124436_-,NA|87aa|down_8|NZ_CP019611.1_137544_137805_-	NA|290aa|up_9|NZ_CP019611.1_92333_93203_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_8|NZ_CP019611.1_93223_94234_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|215aa|up_7|NZ_CP019611.1_94506_95151_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_6|NZ_CP019611.1_95217_96447_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_5|NZ_CP019611.1_96729_98079_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_4|NZ_CP019611.1_98090_99230_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_3|NZ_CP019611.1_99226_99958_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|1948aa|up_2|NZ_CP019611.1_99966_105810_-	pfam00823, PPE, PPE family	NA|339aa|up_1|NZ_CP019611.1_105858_106875_-	pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal	NA|94aa|up_0|NZ_CP019611.1_106833_107115_+	NA	NA|86aa|down_0|NZ_CP019611.1_112018_112276_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP019611.1_112531_122005_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP019611.1_122630_123077_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP019611.1_123113_123854_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP019611.1_124148_124436_-	NA	NA|265aa|down_5|NZ_CP019611.1_136154_136949_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_6|NZ_CP019611.1_137030_137402_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_7|NZ_CP019611.1_137299_137518_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_8|NZ_CP019611.1_137544_137805_-	NA	NA|130aa|down_9|NZ_CP019611.1_137919_138309_+	pfam05305, DUF732, Protein of unknown function (DUF732)
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	2	318828-321693	2	CRT	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CNNCGGCGGCNCCGGCGGCNNCGGCGGNNCCGGCGGC	37	3	7	319474-319583|320527-320561|320527-320561|321424-321449|321424-321449|321424-321449|321424-321449	NZ_CP019611.1_318718-318827|NZ_CP019611.1_318802-318836|NZ_CP019611.1_303678-303712|NZ_CP019611.1_312668-312693|NZ_CP019611.1_313013-313038|NZ_CP019611.1_313358-313383|NZ_CP019611.1_313703-313728	NA	30	30	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|1096aa|up_1|NZ_CP019611.1_313390_316678_+,NA|280aa|down_2|NZ_CP019611.1_325007_325847_+	NA|64aa|up_9|NZ_CP019611.1_292484_292676_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_8|NZ_CP019611.1_292890_294093_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_7|NZ_CP019611.1_294117_295239_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_6|NZ_CP019611.1_295309_296818_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1505aa|up_5|NZ_CP019611.1_296988_301503_+	pfam00934, PE, PE family	NA|2109aa|up_4|NZ_CP019611.1_301793_308120_+	pfam00934, PE, PE family	NA|516aa|up_3|NZ_CP019611.1_308286_309834_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_2|NZ_CP019611.1_309830_310667_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|1096aa|up_1|NZ_CP019611.1_313390_316678_+	NA	NA|219aa|up_0|NZ_CP019611.1_316806_317463_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP019611.1_322400_324047_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP019611.1_324120_324912_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP019611.1_325007_325847_+	NA	NA|399aa|down_3|NZ_CP019611.1_325901_327098_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP019611.1_327126_327837_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP019611.1_327901_328945_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP019611.1_329097_330009_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP019611.1_330024_331089_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|344aa|down_8|NZ_CP019611.1_332331_333363_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD	NA|175aa|down_9|NZ_CP019611.1_333376_333901_-	COG0663, PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	3	482401-482489	1	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_6|NZ_CP019611.1_472987_473758_-,NA|233aa|up_0|NZ_CP019611.1_481505_482204_-,NA|126aa|down_6|NZ_CP019611.1_487724_488102_+	NA|388aa|up_9|NZ_CP019611.1_468658_469822_-	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|351aa|up_8|NZ_CP019611.1_469818_470871_-	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|288aa|up_7|NZ_CP019611.1_471369_472233_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_6|NZ_CP019611.1_472987_473758_-	NA	NA|549aa|up_5|NZ_CP019611.1_473754_475401_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_4|NZ_CP019611.1_475397_476261_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_3|NZ_CP019611.1_476253_477180_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_2|NZ_CP019611.1_477181_478807_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|652aa|up_1|NZ_CP019611.1_479514_481470_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP019611.1_481505_482204_-	NA	NA|173aa|down_0|NZ_CP019611.1_482549_483068_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP019611.1_483068_484052_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP019611.1_484044_485238_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP019611.1_485243_486065_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP019611.1_486196_486880_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP019611.1_486879_487617_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP019611.1_487724_488102_+	NA	NA|225aa|down_7|NZ_CP019611.1_488200_488875_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP019611.1_488978_489773_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP019611.1_489779_490235_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	4	1118676-1119474	3	CRT	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGGNGCCGCCGGNN	18	0	0	NA	NA	NA	15	15	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP019611.1_1118191_1118374_-,NA	NA|398aa|up_9|NZ_CP019611.1_1108369_1109563_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP019611.1_1109598_1111281_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP019611.1_1111297_1113493_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP019611.1_1113606_1114740_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP019611.1_1114736_1115357_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP019611.1_1115453_1116035_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP019611.1_1115964_1116690_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP019611.1_1116779_1117700_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP019611.1_1117739_1118168_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP019611.1_1118191_1118374_-	NA	NA|868aa|down_0|NZ_CP019611.1_1121539_1124143_-	pfam00934, PE, PE family	NA|804aa|down_1|NZ_CP019611.1_1124392_1126804_-	pfam00934, PE, PE family	NA|537aa|down_2|NZ_CP019611.1_1127094_1128705_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_3|NZ_CP019611.1_1128728_1129637_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_4|NZ_CP019611.1_1129860_1131756_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_5|NZ_CP019611.1_1131752_1133369_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_6|NZ_CP019611.1_1133365_1137358_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_7|NZ_CP019611.1_1137354_1137663_+	pfam00934, PE, PE family	NA|514aa|down_8|NZ_CP019611.1_1137665_1139207_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_9|NZ_CP019611.1_1139255_1139549_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	5	1119860-1119971	1	PILER-CR	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGTTGCCGATCA	25	1	6	1119933-1119949|1119933-1119949|1119933-1119949|1119933-1119949|1119933-1119949|1119933-1119949	NZ_CP019611.1_408541-408557|NZ_CP019611.1_1631499-1631483|NZ_CP019611.1_1980574-1980590|NZ_CP019611.1_2004695-2004679|NZ_CP019611.1_3213107-3213123|NZ_CP019611.1_3586332-3586348	NA	2	2	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP019611.1_1118191_1118374_-,NA	NA|398aa|up_9|NZ_CP019611.1_1108369_1109563_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP019611.1_1109598_1111281_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP019611.1_1111297_1113493_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP019611.1_1113606_1114740_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP019611.1_1114736_1115357_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP019611.1_1115453_1116035_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP019611.1_1115964_1116690_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP019611.1_1116779_1117700_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP019611.1_1117739_1118168_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP019611.1_1118191_1118374_-	NA	NA|868aa|down_0|NZ_CP019611.1_1121539_1124143_-	pfam00934, PE, PE family	NA|804aa|down_1|NZ_CP019611.1_1124392_1126804_-	pfam00934, PE, PE family	NA|537aa|down_2|NZ_CP019611.1_1127094_1128705_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_3|NZ_CP019611.1_1128728_1129637_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_4|NZ_CP019611.1_1129860_1131756_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_5|NZ_CP019611.1_1131752_1133369_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_6|NZ_CP019611.1_1133365_1137358_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_7|NZ_CP019611.1_1137354_1137663_+	pfam00934, PE, PE family	NA|514aa|down_8|NZ_CP019611.1_1137665_1139207_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_9|NZ_CP019611.1_1139255_1139549_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	6	1125635-1126451	4	CRT	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	NNNGCCGCCGNCGCCGCCGNNNCCG	25	3	4	1126299-1126321|1126299-1126321|1126344-1126375|1126398-1126429	NZ_CP019611.1_1123656-1123678|NZ_CP019611.1_3833632-3833610|NZ_CP019611.1_1123683-1123714|NZ_CP019611.1_1123737-1123768	NA	10	10	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_2|NZ_CP019611.1_1118191_1118374_-,NA	NA|732aa|up_9|NZ_CP019611.1_1111297_1113493_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_8|NZ_CP019611.1_1113606_1114740_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_7|NZ_CP019611.1_1114736_1115357_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_6|NZ_CP019611.1_1115453_1116035_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_5|NZ_CP019611.1_1115964_1116690_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_4|NZ_CP019611.1_1116779_1117700_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_3|NZ_CP019611.1_1117739_1118168_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_2|NZ_CP019611.1_1118191_1118374_-	NA	NA|936aa|up_1|NZ_CP019611.1_1118468_1121276_-	pfam00934, PE, PE family	NA|868aa|up_0|NZ_CP019611.1_1121539_1124143_-	pfam00934, PE, PE family	NA|537aa|down_0|NZ_CP019611.1_1127094_1128705_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_1|NZ_CP019611.1_1128728_1129637_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_2|NZ_CP019611.1_1129860_1131756_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_3|NZ_CP019611.1_1131752_1133369_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_4|NZ_CP019611.1_1133365_1137358_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_5|NZ_CP019611.1_1137354_1137663_+	pfam00934, PE, PE family	NA|514aa|down_6|NZ_CP019611.1_1137665_1139207_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_7|NZ_CP019611.1_1139255_1139549_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_8|NZ_CP019611.1_1139578_1139869_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|296aa|down_9|NZ_CP019611.1_1139879_1140767_+	pfam14011, ESX-1_EspG, EspG family
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	7	1154194-1154892	2	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	1154482-1154523|1154557-1154589	NZ_CP019611.1_1162513-1162554|NZ_CP019611.1_1161328-1161360	NA	10	10	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP019611.1_1151206_1151509_+,NA|161aa|down_1|NZ_CP019611.1_1164302_1164785_-,NA|410aa|down_5|NZ_CP019611.1_1166901_1168131_+	NA|262aa|up_9|NZ_CP019611.1_1145901_1146687_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP019611.1_1146675_1147479_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP019611.1_1147488_1148886_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP019611.1_1149064_1150840_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP019611.1_1150982_1151210_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP019611.1_1151206_1151509_+	NA	NA|74aa|up_3|NZ_CP019611.1_1151556_1151778_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP019611.1_1151774_1152200_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP019611.1_1152335_1152968_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP019611.1_1152964_1153873_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP019611.1_1163643_1164315_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP019611.1_1164302_1164785_-	NA	NA|239aa|down_2|NZ_CP019611.1_1164842_1165559_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP019611.1_1165660_1166317_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP019611.1_1166386_1166878_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP019611.1_1166901_1168131_+	NA	NA|621aa|down_6|NZ_CP019611.1_1168285_1170148_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP019611.1_1170219_1170606_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|212aa|down_8|NZ_CP019611.1_1170608_1171244_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP019611.1_1171331_1172216_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	8	1482414-1482490	3	CRISPRCasFinder	no	c2c9_V-U4	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type V-U4	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	TypeV-U4	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|136aa|up_9|NZ_CP019611.1_1468309_1468717_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_8|NZ_CP019611.1_1468776_1469463_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_7|NZ_CP019611.1_1469616_1472250_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_6|NZ_CP019611.1_1472272_1474660_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_5|NZ_CP019611.1_1474797_1475520_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_4|NZ_CP019611.1_1475516_1476314_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_3|NZ_CP019611.1_1476315_1477203_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_2|NZ_CP019611.1_1477208_1478423_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_1|NZ_CP019611.1_1479446_1480892_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|479aa|up_0|NZ_CP019611.1_1480888_1482325_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP019611.1_1483625_1485176_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP019611.1_1485227_1485620_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP019611.1_1485616_1485874_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP019611.1_1486056_1487292_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP019611.1_1487542_1487956_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP019611.1_1487952_1488189_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP019611.1_1488292_1488799_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP019611.1_1488912_1489383_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP019611.1_1489426_1490188_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP019611.1_1490244_1490556_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	9	1716110-1717057	5	CRT	no	csa3	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGGGCCGGCGGNNCCGGCGG	21	1	3	1716893-1716928|1716893-1716928|1716893-1716928	NZ_CP019611.1_1465511-1465476|NZ_CP019611.1_2004976-2005011|NZ_CP019611.1_3213420-3213385	NA	19	19	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_2|NZ_CP019611.1_1721058_1721610_-,NA|81aa|down_8|NZ_CP019611.1_1727073_1727316_+	NA|685aa|up_9|NZ_CP019611.1_1703746_1705801_-	TIGR00350, Transcriptional_regulator_LytR, cell envelope-related function transcriptional attenuator common domain	NA|390aa|up_8|NZ_CP019611.1_1705966_1707136_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_7|NZ_CP019611.1_1707223_1708240_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_6|NZ_CP019611.1_1708401_1709043_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_5|NZ_CP019611.1_1709123_1710179_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_4|NZ_CP019611.1_1710230_1710623_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_3|NZ_CP019611.1_1710680_1711103_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|97aa|up_2|NZ_CP019611.1_1711064_1711355_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|up_1|NZ_CP019611.1_1711459_1712365_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_0|NZ_CP019611.1_1712383_1713199_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|880aa|down_0|NZ_CP019611.1_1717326_1719966_-	pfam00934, PE, PE family	NA|215aa|down_1|NZ_CP019611.1_1720433_1721078_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_2|NZ_CP019611.1_1721058_1721610_-	NA	NA|218aa|down_3|NZ_CP019611.1_1721759_1722413_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_4|NZ_CP019611.1_1722483_1723512_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_5|NZ_CP019611.1_1724200_1724971_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_6|NZ_CP019611.1_1725057_1725870_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_7|NZ_CP019611.1_1725937_1726798_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|81aa|down_8|NZ_CP019611.1_1727073_1727316_+	NA	NA|431aa|down_9|NZ_CP019611.1_1727592_1728885_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	10	1754168-1754419	2	PILER-CR	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CGGGTGGTGCCAGGTCGGCGGGCGCGGGTGGCGCCAGTTCGGCGGGCGCGGGTGGCGCCAGGT	63	1	1	1754341-1754396	NZ_CP019611.1_1754469-1754524	NA	2	2	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|67aa|up_3|NZ_CP019611.1_1752266_1752467_+,NA	NA|158aa|up_9|NZ_CP019611.1_1742737_1743211_+	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|398aa|up_8|NZ_CP019611.1_1743207_1744401_-	PRK07777, PRK07777, putative succinyldiaminopimelate transaminase DapC	NA|404aa|up_7|NZ_CP019611.1_1744557_1745769_+	PRK08242, PRK08242, acetyl-CoA C-acetyltransferase	NA|721aa|up_6|NZ_CP019611.1_1745773_1747936_+	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB	NA|543aa|up_5|NZ_CP019611.1_1748003_1749632_-	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|757aa|up_4|NZ_CP019611.1_1749928_1752199_-	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain	NA|67aa|up_3|NZ_CP019611.1_1752266_1752467_+	NA	NA|168aa|up_2|NZ_CP019611.1_1752476_1752980_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|161aa|up_1|NZ_CP019611.1_1752976_1753459_+	cd00886, MogA_MoaB, MogA_MoaB family	NA|142aa|up_0|NZ_CP019611.1_1753455_1753881_+	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|93aa|down_0|NZ_CP019611.1_1755569_1755848_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|361aa|down_1|NZ_CP019611.1_1755851_1756934_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|130aa|down_2|NZ_CP019611.1_1756930_1757320_-	PRK11770, PRK11770, YccF domain-containing protein	NA|136aa|down_3|NZ_CP019611.1_1757484_1757892_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|610aa|down_4|NZ_CP019611.1_1758010_1759840_-	pfam00934, PE, PE family	NA|651aa|down_5|NZ_CP019611.1_1760100_1762053_+	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase	NA|387aa|down_6|NZ_CP019611.1_1762141_1763302_-	COG4398, COG4398, Uncharacterized protein conserved in bacteria [Function unknown]	NA|163aa|down_7|NZ_CP019611.1_1763401_1763890_-	pfam10969, DUF2771, Protein of unknown function (DUF2771)	NA|549aa|down_8|NZ_CP019611.1_1763886_1765533_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|263aa|down_9|NZ_CP019611.1_1765670_1766459_+	pfam11228, DUF3027, Protein of unknown function (DUF3027)
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	11	2003132-2003988	4	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GGCGGTGTCGGCGGTGCCGGCGG	23	4	75	2003515-2003536|2003560-2003575|2003698-2003719|2003698-2003719|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833|2003815-2003833	NZ_CP019611.1_3740845-3740824|NZ_CP019611.1_2875408-2875393|NZ_CP019611.1_1628464-1628485|NZ_CP019611.1_2008871-2008892|NZ_CP019611.1_1122041-1122023|NZ_CP019611.1_1465175-1465157|NZ_CP019611.1_2004658-2004676|NZ_CP019611.1_2008844-2008862|NZ_CP019611.1_2008916-2008934|NZ_CP019611.1_2417576-2417558|NZ_CP019611.1_2420429-2420411|NZ_CP019611.1_2776761-2776743|NZ_CP019611.1_2848448-2848430|NZ_CP019611.1_2848895-2848877|NZ_CP019611.1_2848994-2848976|NZ_CP019611.1_3583249-3583231|NZ_CP019611.1_3586777-3586759|NZ_CP019611.1_72215-72233|NZ_CP019611.1_106366-106348|NZ_CP019611.1_106990-106972|NZ_CP019611.1_107185-107167|NZ_CP019611.1_107318-107300|NZ_CP019611.1_169814-169832|NZ_CP019611.1_169997-170015|NZ_CP019611.1_170165-170183|NZ_CP019611.1_301308-301326|NZ_CP019611.1_303047-303065|NZ_CP019611.1_303575-303593|NZ_CP019611.1_312166-312184|NZ_CP019611.1_403311-403293|NZ_CP019611.1_465948-465966|NZ_CP019611.1_466038-466056|NZ_CP019611.1_466047-466065|NZ_CP019611.1_466056-466074|NZ_CP019611.1_935032-935050|NZ_CP019611.1_1120041-1120023|NZ_CP019611.1_1123148-1123130|NZ_CP019611.1_1123505-1123487|NZ_CP019611.1_1123556-1123538|NZ_CP019611.1_1123565-1123547|NZ_CP019611.1_1150784-1150766|NZ_CP019611.1_1231143-1231125|NZ_CP019611.1_1337203-1337185|NZ_CP019611.1_1414366-1414384|NZ_CP019611.1_1414588-1414606|NZ_CP019611.1_1464341-1464323|NZ_CP019611.1_1631066-1631084|NZ_CP019611.1_1881938-1881956|NZ_CP019611.1_1882586-1882604|NZ_CP019611.1_1886657-1886639|NZ_CP019611.1_2004187-2004205|NZ_CP019611.1_2004577-2004595|NZ_CP019611.1_2004865-2004883|NZ_CP019611.1_2004883-2004901|NZ_CP019611.1_2009264-2009282|NZ_CP019611.1_2282170-2282152|NZ_CP019611.1_2405540-2405522|NZ_CP019611.1_2405993-2405975|NZ_CP019611.1_2423149-2423131|NZ_CP019611.1_2423158-2423140|NZ_CP019611.1_2643646-2643628|NZ_CP019611.1_2644174-2644156|NZ_CP019611.1_2776116-2776098|NZ_CP019611.1_2788356-2788374|NZ_CP019611.1_2875606-2875588|NZ_CP019611.1_3096035-3096017|NZ_CP019611.1_3149551-3149533|NZ_CP019611.1_3209246-3209264|NZ_CP019611.1_3213333-3213315|NZ_CP019611.1_3350880-3350862|NZ_CP019611.1_3475979-3475997|NZ_CP019611.1_3576564-3576546|NZ_CP019611.1_3577146-3577128|NZ_CP019611.1_3833732-3833750|NZ_CP019611.1_3833831-3833849	NA	16	16	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|89aa|up_3|NZ_CP019611.1_1998564_1998831_+,NA|61aa|down_3|NZ_CP019611.1_2006451_2006634_+,NA|35aa|down_4|NZ_CP019611.1_2006743_2006848_+	NA|465aa|up_9|NZ_CP019611.1_1992898_1994293_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|up_8|NZ_CP019611.1_1994494_1995217_+	pfam06271, RDD, RDD family	NA|389aa|up_7|NZ_CP019611.1_1995248_1996415_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|165aa|up_6|NZ_CP019611.1_1996485_1996980_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|145aa|up_5|NZ_CP019611.1_1997165_1997600_-	pfam14155, DUF4307, Domain of unknown function (DUF4307)	NA|289aa|up_4|NZ_CP019611.1_1997701_1998568_+	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca	NA|89aa|up_3|NZ_CP019611.1_1998564_1998831_+	NA	NA|674aa|up_2|NZ_CP019611.1_1998817_2000839_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|243aa|up_1|NZ_CP019611.1_2000937_2001666_-	TIGR01065, Hypothetical_UPF0073_protein_yqfA	NA|263aa|up_0|NZ_CP019611.1_2001776_2002565_+	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional	NA|107aa|down_0|NZ_CP019611.1_2005266_2005587_+	COG0020, UppS, Undecaprenyl pyrophosphate synthase [Lipid metabolism]	NA|145aa|down_1|NZ_CP019611.1_2005739_2006174_+	pfam00934, PE, PE family	NA|56aa|down_2|NZ_CP019611.1_2006272_2006440_+	smart00637, CBD_II, CBD_II domain	NA|61aa|down_3|NZ_CP019611.1_2006451_2006634_+	NA	NA|35aa|down_4|NZ_CP019611.1_2006743_2006848_+	NA	NA|152aa|down_5|NZ_CP019611.1_2006825_2007281_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|854aa|down_6|NZ_CP019611.1_2007695_2010257_+	pfam00934, PE, PE family	NA|313aa|down_7|NZ_CP019611.1_2010474_2011413_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|427aa|down_8|NZ_CP019611.1_2011800_2013081_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|276aa|down_9|NZ_CP019611.1_2013185_2014013_+	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	12	2359036-2360108	5	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	0	0	NA	NA	NA	15	15	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|191aa|up_7|NZ_CP019611.1_2350544_2351117_+,NA	NA|103aa|up_9|NZ_CP019611.1_2348314_2348623_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP019611.1_2348619_2350239_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|191aa|up_7|NZ_CP019611.1_2350544_2351117_+	NA	NA|209aa|up_6|NZ_CP019611.1_2351251_2351878_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP019611.1_2351943_2352276_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP019611.1_2352291_2353548_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP019611.1_2353675_2354887_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP019611.1_2354959_2356438_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP019611.1_2356434_2357820_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP019611.1_2357897_2358932_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP019611.1_2360961_2361363_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP019611.1_2361359_2361617_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|321aa|down_2|NZ_CP019611.1_2362684_2363647_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|201aa|down_3|NZ_CP019611.1_2363780_2364383_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_4|NZ_CP019611.1_2364463_2366431_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_5|NZ_CP019611.1_2366448_2367273_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_6|NZ_CP019611.1_2367441_2367924_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_7|NZ_CP019611.1_2367995_2368820_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_8|NZ_CP019611.1_2369016_2369955_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed	NA|458aa|down_9|NZ_CP019611.1_2369951_2371325_+	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	13	2875078-2875332	6	CRT	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2875159-2875176|2875159-2875176|2875249-2875266	NZ_CP019611.1_1188809-1188792|NZ_CP019611.1_1397737-1397720|NZ_CP019611.1_4230956-4230939	NA	5	5	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP019611.1_2874437_2874701_-,NA	NA|165aa|up_9|NZ_CP019611.1_2860843_2861338_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP019611.1_2861629_2862307_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP019611.1_2862665_2865491_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP019611.1_2865717_2866578_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP019611.1_2866618_2867485_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP019611.1_2867489_2869376_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP019611.1_2869391_2871425_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP019611.1_2871544_2873770_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP019611.1_2874045_2874441_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP019611.1_2874437_2874701_-	NA	NA|346aa|down_0|NZ_CP019611.1_2876469_2877507_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP019611.1_2877506_2878874_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|480aa|down_2|NZ_CP019611.1_2879047_2880487_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP019611.1_2880519_2881971_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP019611.1_2882000_2882951_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP019611.1_2882965_2883382_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP019611.1_2883659_2884082_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|101aa|down_7|NZ_CP019611.1_2884130_2884433_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP019611.1_2884429_2884744_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP019611.1_2884743_2886477_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	14	2956359-2956578	6	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NZ_CP019611.1_2946774_2947182_-,NA|127aa|down_5|NZ_CP019611.1_2964094_2964475_-	NA|216aa|up_9|NZ_CP019611.1_2940088_2940736_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NZ_CP019611.1_2940742_2942965_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NZ_CP019611.1_2943002_2943446_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NZ_CP019611.1_2943559_2944153_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NZ_CP019611.1_2944235_2944841_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NZ_CP019611.1_2944940_2945945_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NZ_CP019611.1_2946044_2946797_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NZ_CP019611.1_2946774_2947182_-	NA	NA|767aa|up_1|NZ_CP019611.1_2947316_2949617_+	PLN02892, PLN02892, isocitrate lyase	NA|1690aa|up_0|NZ_CP019611.1_2949786_2954856_-	pfam00823, PPE, PPE family	NA|155aa|down_0|NZ_CP019611.1_2958605_2959070_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP019611.1_2959167_2960031_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP019611.1_2960068_2961340_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP019611.1_2961611_2962727_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP019611.1_2962717_2964058_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP019611.1_2964094_2964475_-	NA	NA|621aa|down_6|NZ_CP019611.1_2964631_2966494_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP019611.1_2966501_2966981_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP019611.1_2967217_2967991_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|215aa|down_9|NZ_CP019611.1_2968784_2969429_-	TIGR03085, TIGR03085, TIGR03085 family protein
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	15	3898323-3899239	3,7,7	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-B,Type III-C,Type III-D,Type III-A	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	11,12,12	12	TypeIII-B,TypeIII-C,TypeIII-D,TypeIII-A	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP019611.1_3891602_3891857_-,NA|135aa|up_7|NZ_CP019611.1_3892004_3892409_+,NA|64aa|up_6|NZ_CP019611.1_3892405_3892597_+,NA|86aa|up_4|NZ_CP019611.1_3894183_3894441_+,NA|104aa|up_3|NZ_CP019611.1_3894545_3894857_+,NA|203aa|up_2|NZ_CP019611.1_3895276_3895885_+,NA	NA|92aa|up_9|NZ_CP019611.1_3891151_3891427_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP019611.1_3891602_3891857_-	NA	NA|135aa|up_7|NZ_CP019611.1_3892004_3892409_+	NA	NA|64aa|up_6|NZ_CP019611.1_3892405_3892597_+	NA	NA|385aa|up_5|NZ_CP019611.1_3892795_3893950_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP019611.1_3894183_3894441_+	NA	NA|104aa|up_3|NZ_CP019611.1_3894545_3894857_+	NA	NA|203aa|up_2|NZ_CP019611.1_3895276_3895885_+	NA	NA|470aa|up_1|NZ_CP019611.1_3895955_3897365_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP019611.1_3897361_3898174_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP019611.1_3899278_3900540_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|421aa|down_1|NZ_CP019611.1_3901132_3902394_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_2|NZ_CP019611.1_3904344_3904686_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_3|NZ_CP019611.1_3904686_3905703_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_4|NZ_CP019611.1_3905715_3906864_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_5|NZ_CP019611.1_3906959_3908087_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_6|NZ_CP019611.1_3908083_3908992_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_7|NZ_CP019611.1_3908972_3909683_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_8|NZ_CP019611.1_3909692_3910067_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_9|NZ_CP019611.1_3910063_3912502_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	16	3900635-3901106	4,8,8	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-B,Type III-C,Type III-D,Type III-A	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	5,5,6	6	TypeIII-B,TypeIII-C,TypeIII-D,TypeIII-A	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_9|NZ_CP019611.1_3891602_3891857_-,NA|135aa|up_8|NZ_CP019611.1_3892004_3892409_+,NA|64aa|up_7|NZ_CP019611.1_3892405_3892597_+,NA|86aa|up_5|NZ_CP019611.1_3894183_3894441_+,NA|104aa|up_4|NZ_CP019611.1_3894545_3894857_+,NA|203aa|up_3|NZ_CP019611.1_3895276_3895885_+,NA	NA|85aa|up_9|NZ_CP019611.1_3891602_3891857_-	NA	NA|135aa|up_8|NZ_CP019611.1_3892004_3892409_+	NA	NA|64aa|up_7|NZ_CP019611.1_3892405_3892597_+	NA	NA|385aa|up_6|NZ_CP019611.1_3892795_3893950_+	pfam00665, rve, Integrase core domain	NA|86aa|up_5|NZ_CP019611.1_3894183_3894441_+	NA	NA|104aa|up_4|NZ_CP019611.1_3894545_3894857_+	NA	NA|203aa|up_3|NZ_CP019611.1_3895276_3895885_+	NA	NA|470aa|up_2|NZ_CP019611.1_3895955_3897365_+	pfam00665, rve, Integrase core domain	NA|271aa|up_1|NZ_CP019611.1_3897361_3898174_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|up_0|NZ_CP019611.1_3899278_3900540_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|421aa|down_0|NZ_CP019611.1_3901132_3902394_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_1|NZ_CP019611.1_3904344_3904686_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_2|NZ_CP019611.1_3904686_3905703_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_3|NZ_CP019611.1_3905715_3906864_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_4|NZ_CP019611.1_3906959_3908087_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_5|NZ_CP019611.1_3908083_3908992_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_6|NZ_CP019611.1_3908972_3909683_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_7|NZ_CP019611.1_3909692_3910067_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_8|NZ_CP019611.1_3910063_3912502_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_9|NZ_CP019611.1_3912498_3913221_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_003287145.1_ASM328714v1	NZ_CP019611	Mycobacterium tuberculosis strain H83 chromosome, complete genome	17	3902429-3904296	9,9,5	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-B,Type III-C,Type III-D,Type III-A	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	25,25,24	25	TypeIII-B,TypeIII-C,TypeIII-D,TypeIII-A	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|135aa|up_9|NZ_CP019611.1_3892004_3892409_+,NA|64aa|up_8|NZ_CP019611.1_3892405_3892597_+,NA|86aa|up_6|NZ_CP019611.1_3894183_3894441_+,NA|104aa|up_5|NZ_CP019611.1_3894545_3894857_+,NA|203aa|up_4|NZ_CP019611.1_3895276_3895885_+,NA	NA|135aa|up_9|NZ_CP019611.1_3892004_3892409_+	NA	NA|64aa|up_8|NZ_CP019611.1_3892405_3892597_+	NA	NA|385aa|up_7|NZ_CP019611.1_3892795_3893950_+	pfam00665, rve, Integrase core domain	NA|86aa|up_6|NZ_CP019611.1_3894183_3894441_+	NA	NA|104aa|up_5|NZ_CP019611.1_3894545_3894857_+	NA	NA|203aa|up_4|NZ_CP019611.1_3895276_3895885_+	NA	NA|470aa|up_3|NZ_CP019611.1_3895955_3897365_+	pfam00665, rve, Integrase core domain	NA|271aa|up_2|NZ_CP019611.1_3897361_3898174_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|up_1|NZ_CP019611.1_3899278_3900540_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|421aa|up_0|NZ_CP019611.1_3901132_3902394_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_0|NZ_CP019611.1_3904344_3904686_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_1|NZ_CP019611.1_3904686_3905703_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_2|NZ_CP019611.1_3905715_3906864_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_3|NZ_CP019611.1_3906959_3908087_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_4|NZ_CP019611.1_3908083_3908992_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_5|NZ_CP019611.1_3908972_3909683_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_6|NZ_CP019611.1_3909692_3910067_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_7|NZ_CP019611.1_3910063_3912502_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_8|NZ_CP019611.1_3912498_3913221_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_9|NZ_CP019611.1_3913620_3914166_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]
