assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003194045.1_ASM319404v1	NZ_CP029644	Corynebacterium diphtheriae strain BQ11 chromosome, complete genome	1	39566-40368	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2	cas9,cas1,cas2,DEDDh,csa3,cas3,WYL,cas4,DinG	Type II-C, or Type II-C?, Type II-B,Type II-B,Type II-A	GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC,GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC,GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	36,36,36	0	0	NA	NA	NA:NA:NA	11,12,10	12	TypeII-C,orTypeII-C?,TypeII-B,TypeII-B,TypeII-A	cas9,cas1,cas2,DEDDh,csa3,cas3,WYL,cas4,DinG	NA,NA|100aa|down_8|NZ_CP029644.1_52346_52646_-,NA|172aa|down_9|NZ_CP029644.1_53052_53568_-	NA|600aa|up_9|NZ_CP029644.1_27544_29344_+	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|223aa|up_8|NZ_CP029644.1_29327_29996_+	PRK00043, thiE, thiamine phosphate synthase	NA|363aa|up_7|NZ_CP029644.1_29992_31081_+	TIGR02352, Glycine_oxidase, glycine oxidase ThiO	NA|67aa|up_6|NZ_CP029644.1_31064_31265_+	TIGR01683, thiamine_biosynthesis_protein_ThiS, thiamine biosynthesis protein ThiS	NA|262aa|up_5|NZ_CP029644.1_31266_32052_+	PRK00208, thiG, thiazole synthase; Reviewed	NA|337aa|up_4|NZ_CP029644.1_32051_33062_+	PRK05600, PRK05600, thiamine biosynthesis protein ThiF; Validated	NA|285aa|up_3|NZ_CP029644.1_33058_33913_+	PRK14713, PRK14713, bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	cas9|1085aa|up_2|NZ_CP029644.1_35029_38284_+	pfam18470, Cas9_a, Cas9 alpha-helical lobe domain	cas1|305aa|up_1|NZ_CP029644.1_38287_39202_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|110aa|up_0|NZ_CP029644.1_39185_39515_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|90aa|down_0|NZ_CP029644.1_42269_42539_-	PRK00159, PRK00159, putative septation inhibitor protein; Reviewed	NA|670aa|down_1|NZ_CP029644.1_42655_44665_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|510aa|down_2|NZ_CP029644.1_44661_46191_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|487aa|down_3|NZ_CP029644.1_46203_47664_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|450aa|down_4|NZ_CP029644.1_47660_49010_-	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|485aa|down_5|NZ_CP029644.1_49010_50465_-	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|163aa|down_6|NZ_CP029644.1_50464_50953_-	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms]	NA|289aa|down_7|NZ_CP029644.1_50966_51833_-	pfam12401, DUF3662, Protein of unknown function (DUF2662)	NA|100aa|down_8|NZ_CP029644.1_52346_52646_-	NA	NA|172aa|down_9|NZ_CP029644.1_53052_53568_-	NA
GCF_003194045.1_ASM319404v1	NZ_CP029644	Corynebacterium diphtheriae strain BQ11 chromosome, complete genome	2	697850-697927	2	CRISPRCasFinder	no		cas9,cas1,cas2,DEDDh,csa3,cas3,WYL,cas4,DinG	Orphan	GGTAAGAGTGTCAAAATGACACCC	24	0	0	NA	NA	NA	1	1	Orphan	cas9,cas1,cas2,DEDDh,csa3,cas3,WYL,cas4,DinG	NA|233aa|up_4|NZ_CP029644.1_692149_692848_-,NA|168aa|up_3|NZ_CP029644.1_692898_693402_-,NA|261aa|down_2|NZ_CP029644.1_700662_701445_+,NA|212aa|down_4|NZ_CP029644.1_703504_704140_+,NA|100aa|down_5|NZ_CP029644.1_704165_704465_+,NA|62aa|down_6|NZ_CP029644.1_704553_704739_+,NA|205aa|down_7|NZ_CP029644.1_704854_705469_+,NA|307aa|down_8|NZ_CP029644.1_705475_706396_+	NA|684aa|up_9|NZ_CP029644.1_686170_688222_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|298aa|up_8|NZ_CP029644.1_688166_689060_-	TIGR03882, hypothetical_protein, bacteriocin biosynthesis cyclodehydratase domain	NA|174aa|up_7|NZ_CP029644.1_689095_689617_+	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only]	NA|464aa|up_6|NZ_CP029644.1_689613_691005_-	pfam10103, Zincin_2, Zincin-like metallopeptidase	NA|347aa|up_5|NZ_CP029644.1_691097_692138_+	COG3480, SdrC, Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms]	NA|233aa|up_4|NZ_CP029644.1_692149_692848_-	NA	NA|168aa|up_3|NZ_CP029644.1_692898_693402_-	NA	NA|988aa|up_2|NZ_CP029644.1_693574_696538_+	PRK00068, PRK00068, hypothetical protein; Validated	NA|111aa|up_1|NZ_CP029644.1_696711_697044_-	pfam08667, BetR, BetR domain	NA|69aa|up_0|NZ_CP029644.1_697125_697332_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|128aa|down_0|NZ_CP029644.1_698830_699214_+	pfam02467, Whib, Transcription factor WhiB	NA|408aa|down_1|NZ_CP029644.1_699433_700657_+	PRK10811, rne, ribonuclease E; Reviewed	NA|261aa|down_2|NZ_CP029644.1_700662_701445_+	NA	NA|673aa|down_3|NZ_CP029644.1_701480_703499_+	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD	NA|212aa|down_4|NZ_CP029644.1_703504_704140_+	NA	NA|100aa|down_5|NZ_CP029644.1_704165_704465_+	NA	NA|62aa|down_6|NZ_CP029644.1_704553_704739_+	NA	NA|205aa|down_7|NZ_CP029644.1_704854_705469_+	NA	NA|307aa|down_8|NZ_CP029644.1_705475_706396_+	NA	NA|618aa|down_9|NZ_CP029644.1_706395_708249_+	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional
GCF_003194045.1_ASM319404v1	NZ_CP029644	Corynebacterium diphtheriae strain BQ11 chromosome, complete genome	3	1572002-1572114	3	CRISPRCasFinder	no		cas9,cas1,cas2,DEDDh,csa3,cas3,WYL,cas4,DinG	Orphan	GCTGGTTTAGGAGCCGCAGGCTT	23	0	0	NA	NA	NA	2	2	Orphan	cas9,cas1,cas2,DEDDh,csa3,cas3,WYL,cas4,DinG	NA,NA	NA|249aa|up_9|NZ_CP029644.1_1558430_1559177_-	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|756aa|up_8|NZ_CP029644.1_1559356_1561624_-	TIGR02696, polyribonucleotide_nucleotidyltransferase, guanosine pentaphosphate synthetase I/polynucleotide phosphorylase	NA|90aa|up_7|NZ_CP029644.1_1561815_1562085_-	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|320aa|up_6|NZ_CP029644.1_1562256_1563216_-	cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB)	NA|324aa|up_5|NZ_CP029644.1_1563253_1564225_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|301aa|up_4|NZ_CP029644.1_1564247_1565150_+	PRK03287, truB, tRNA pseudouridine synthase B; Provisional	NA|231aa|up_3|NZ_CP029644.1_1565146_1565839_-	COG2977, EntD, Phosphopantetheinyl transferase component of siderophore synthetase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|269aa|up_2|NZ_CP029644.1_1565835_1566642_-	COG1409, Icc, Predicted phosphohydrolases [General function prediction only]	NA|440aa|up_1|NZ_CP029644.1_1566688_1568008_-	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|148aa|up_0|NZ_CP029644.1_1568876_1569320_-	PRK00521, rbfA, 30S ribosome-binding factor RbfA	NA|111aa|down_0|NZ_CP029644.1_1572449_1572782_-	pfam04296, DUF448, Protein of unknown function (DUF448)	NA|333aa|down_1|NZ_CP029644.1_1573038_1574037_-	PRK12327, nusA, transcription elongation factor NusA; Provisional	NA|185aa|down_2|NZ_CP029644.1_1574033_1574588_-	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed	NA|303aa|down_3|NZ_CP029644.1_1574639_1575548_+	pfam14530, DUF4439, Domain of unknown function (DUF4439)	NA|586aa|down_4|NZ_CP029644.1_1575626_1577384_-	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional	NA|249aa|down_5|NZ_CP029644.1_1577415_1578162_+	PRK02101, PRK02101, peroxide stress protein YaaA	NA|275aa|down_6|NZ_CP029644.1_1578181_1579006_-	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT)	NA|449aa|down_7|NZ_CP029644.1_1579004_1580351_+	PRK00029, PRK00029, YdiU family protein	NA|375aa|down_8|NZ_CP029644.1_1580354_1581479_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|170aa|down_9|NZ_CP029644.1_1581498_1582008_-	pfam01035, DNA_binding_1, 6-O-methylguanine DNA methyltransferase, DNA binding domain
