The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP020034	Vibrio parahaemolyticus strain 20130629002S01 chromosome I, complete sequence	3394092	559159	576339	3394092	tRNA	uncultured_Mediterranean_phage(18.18%)	15	NA	NA
WP_005455581.1|559159_560800_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.4	4.2e-155
WP_005455579.1|560878_562180_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	4.2e-134
WP_005455577.1|562589_562871_+	cell division protein FtsB	NA	NA	NA	NA	NA
WP_005478544.1|562872_563577_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A2H4UTB4	Bodo_saltans_virus	23.6	5.9e-05
WP_005380896.1|563594_564071_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_021450029.1|564117_565161_+|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_005478553.1|565160_565937_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.4	5.0e-66
WP_005455562.1|565936_566563_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	1.3e-35
WP_021486791.1|566577_567501_+	peptidoglycan DD-metalloendopeptidase family protein	NA	D7RWE0	Brochothrix_phage	35.2	4.1e-06
WP_005478537.1|567581_568571_+	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	35.2	6.9e-36
WP_085577166.1|568650_571212_-	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	24.0	1.2e-34
WP_005455551.1|571296_571779_+	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	48.7	1.7e-27
WP_005478550.1|571979_573023_+	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	60.7	8.1e-112
WP_005455548.1|573146_573614_+	recombination regulator RecX	NA	NA	NA	NA	NA
WP_005455546.1|573756_576339_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.9	1.0e-78
>prophage 2
NZ_CP020034	Vibrio parahaemolyticus strain 20130629002S01 chromosome I, complete sequence	3394092	1913081	1922488	3394092		Vibrio_phage(50.0%)	12	NA	NA
WP_005495404.1|1913081_1913483_-	recombination protein NinG	NA	A0A2I7S3K0	Vibrio_phage	45.0	3.7e-20
WP_025526418.1|1913651_1914302_-	DUF1367 family protein	NA	K7PKS6	Enterobacteria_phage	32.8	1.6e-20
WP_031855936.1|1914294_1914675_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085576899.1|1914671_1915625_-	helix-turn-helix domain-containing protein	NA	A0A1V0E831	Vibrio_phage	35.7	2.9e-39
WP_005495414.1|1915690_1915909_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025526421.1|1915905_1916370_-	hypothetical protein	NA	K7PJS5	Enterobacterial_phage	48.8	1.4e-18
WP_021486590.1|1916389_1916611_-	helix-turn-helix transcriptional regulator	NA	A0A1P8DTF8	Proteus_phage	40.6	2.8e-06
WP_024702645.1|1916719_1917388_+	helix-turn-helix domain-containing protein	NA	A0A1V0E8B5	Vibrio_phage	57.1	1.1e-66
WP_127463331.1|1918098_1918278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085576900.1|1918290_1921455_+	hypothetical protein	NA	I3PUZ3	Vibrio_phage	33.6	8.7e-24
WP_031855931.1|1921447_1921975_+	siphovirus Gp157 family protein	NA	NA	NA	NA	NA
WP_005495429.1|1922299_1922488_+	hypothetical protein	NA	F6LQB8	Bdellovibrio_phage	54.7	2.3e-09
>prophage 3
NZ_CP020034	Vibrio parahaemolyticus strain 20130629002S01 chromosome I, complete sequence	3394092	2650745	2657447	3394092		Staphylococcus_phage(50.0%)	7	NA	NA
WP_005440184.1|2650745_2651216_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.3	1.7e-32
WP_005496254.1|2651385_2652495_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.6	1.5e-63
WP_005483039.1|2652664_2653318_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	37.5	1.6e-33
WP_025625922.1|2653330_2654455_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.0	4.0e-48
WP_005482986.1|2654462_2654912_-	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_031855514.1|2655039_2656290_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.7	2.8e-98
WP_005483011.1|2656307_2657447_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	1.3e-62
>prophage 1
NZ_CP020035	Vibrio parahaemolyticus strain 20130629002S01 chromosome II, complete sequence	1902897	765802	802608	1902897	transposase	Gordonia_phage(28.57%)	27	NA	NA
WP_024702350.1|765802_766834_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_108744620.1|767471_769020_+|transposase	IS3 family transposase	transposase	A0A1B3AZE5	Gordonia_phage	25.5	3.9e-09
WP_031856292.1|770331_770886_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138058906.1|770980_771484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158090639.1|771510_774237_+	TcfC E-set like domain-containing protein	NA	NA	NA	NA	NA
WP_139833625.1|774250_774961_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031856297.1|774944_776039_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031856298.1|776035_776689_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_050505292.1|776700_779001_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031856300.1|779099_779975_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031856301.1|779979_781428_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_031856302.1|781501_781912_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158090023.1|782127_782601_+	transglutaminase-like cysteine peptidase	NA	NA	NA	NA	NA
WP_108744620.1|783516_785066_-|transposase	IS3 family transposase	transposase	A0A1B3AZE5	Gordonia_phage	25.5	3.9e-09
WP_024702350.1|785703_786735_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_031856440.1|787961_788192_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031856441.1|788188_788707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139833612.1|789209_791234_+	TcfC E-set like domain-containing protein	NA	NA	NA	NA	NA
WP_031855789.1|791202_792246_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139833613.1|792256_792484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085576883.1|792655_793765_+	CZB domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	46.8	2.9e-14
WP_031855791.1|793923_794844_+|transposase	IS5 family transposase	transposase	A0A1V0E8E1	Vibrio_phage	92.5	1.3e-166
WP_031855792.1|797654_798347_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	39.3	1.1e-37
WP_031855794.1|799155_799491_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031855795.1|799546_800794_+	outer membrane protein transport protein	NA	NA	NA	NA	NA
WP_085576882.1|800849_802004_+	hypothetical protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	27.4	2.8e-20
WP_031855796.1|802185_802608_+|transposase	IS200/IS605 family transposase	transposase	Q331U4	Clostridium_botulinum_C_phage	34.1	7.3e-19
>prophage 2
NZ_CP020035	Vibrio parahaemolyticus strain 20130629002S01 chromosome II, complete sequence	1902897	1060334	1070018	1902897		Vibrio_phage(66.67%)	13	NA	NA
WP_108744628.1|1060334_1060691_-	hypothetical protein	NA	Q9MCC3	Vibrio_phage	78.8	4.5e-38
WP_108744629.1|1060896_1061220_+	hypothetical protein	NA	U3PB60	Vibrio_phage	59.2	4.6e-05
WP_108744630.1|1061219_1061777_+	3'-5' exonuclease	NA	W6ASW5	Vibrio_phage	57.7	2.9e-55
WP_108744631.1|1061779_1063807_+	replication endonuclease	NA	A0A0F6YPA7	Vibrio_phage	57.6	3.3e-186
WP_168192512.1|1063885_1064200_+	chemotaxis protein	NA	Q2PZB5	Vibrio_virus	50.5	1.2e-23
WP_146186907.1|1064267_1064447_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108744632.1|1064461_1064665_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108744633.1|1064802_1066326_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108744634.1|1066325_1066661_+	DUF2523 domain-containing protein	NA	NA	NA	NA	NA
WP_108744635.1|1066673_1067987_+	hypothetical protein	NA	A0A077JGB2	Xanthomonas_phage	26.4	6.0e-19
WP_061009273.1|1067986_1069171_+	hypothetical protein	NA	A7BJX1	Enterobacteria_phage	29.7	6.5e-41
WP_061009274.1|1069438_1069807_-	phage protein	NA	Q9MCC4	Vibrio_phage	66.4	2.6e-41
WP_108744636.1|1069766_1070018_-	hypothetical protein	NA	Q9MCC3	Vibrio_phage	60.5	4.2e-14
>prophage 1
NZ_CP020037	Vibrio parahaemolyticus strain 20130629002S01 plasmid pVPGX2, complete sequence	38608	2509	23108	38608	portal,plate,capsid,terminase,tail	Aeromonas_phage(48.0%)	27	NA	NA
WP_108744660.1|2509_4564_+|terminase	phage terminase large subunit family protein	terminase	A2I2W6	Vibrio_virus	39.3	1.6e-114
WP_050505259.1|4766_6326_+|portal	phage portal protein	portal	A0A067ZJA4	Vibrio_phage	41.8	5.5e-96
WP_158272261.1|6353_7766_+	S49 family peptidase	NA	A0A219YA27	Aeromonas_phage	40.8	2.6e-68
WP_031855855.1|7768_8140_+	hypothetical protein	NA	A0A0S4L3C3	Pseudomonas_phage	44.3	2.5e-15
WP_108744662.1|8193_9126_+|capsid	phage capsid protein	capsid	Q5ZQX7	Pseudomonas_phage	49.0	4.9e-76
WP_031855800.1|9192_9564_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050505242.1|9547_10165_+	hypothetical protein	NA	A0A2I7R3I3	Vibrio_phage	31.6	1.1e-12
WP_031855802.1|10151_10688_+	hypothetical protein	NA	A0A219Y9U4	Aeromonas_phage	38.8	8.6e-25
WP_085609536.1|10680_11331_+|plate	phage baseplate assembly protein V	plate	A0A219YA41	Aeromonas_phage	40.9	1.6e-36
WP_085609535.1|11340_11538_+	hypothetical protein	NA	R9TR72	Vibrio_phage	63.1	1.4e-12
WP_050505244.1|11562_11910_+	hypothetical protein	NA	A0A219Y9P2	Aeromonas_phage	41.1	1.1e-17
WP_108744663.1|11902_12742_+|plate	baseplate J/gp47 family protein	plate	A0A219YAY1	Aeromonas_phage	48.7	9.6e-71
WP_108744664.1|12738_13482_+|tail	phage tail protein I	tail	A0A219YA10	Aeromonas_phage	47.1	9.8e-35
WP_108744693.1|13499_14003_+|tail	phage tail protein	tail	A2I2X8	Vibrio_virus	46.7	1.9e-29
WP_108744665.1|14012_14378_+	hypothetical protein	NA	Q6R4V8	Vibrio_virus	43.4	1.8e-18
WP_085609530.1|14370_14682_+	hypothetical protein	NA	Q6R4V9	Vibrio_virus	39.1	7.7e-10
WP_108744666.1|14678_15032_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108744667.1|15038_15800_+	hypothetical protein	NA	B0ZSG5	Halomonas_phage	33.1	2.7e-08
WP_108744668.1|15813_16119_+|tail	phage tail assembly chaperone	tail	M1TW54	Prochlorococcus_phage	33.7	5.1e-06
WP_158272262.1|16228_17365_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A0A219Y8Y1	Aeromonas_phage	56.8	7.5e-111
WP_031855812.1|17377_17890_+|tail	phage major tail tube protein	tail	A0A219YA39	Aeromonas_phage	52.9	2.7e-44
WP_085609525.1|17954_18206_+|tail	phage tail assembly protein	tail	A0A219YBU5	Aeromonas_phage	46.6	4.2e-14
WP_139833970.1|18220_18361_+|tail	GpE family phage tail protein	tail	A0A2H4ETI8	Aeromonas_phage	55.8	4.2e-08
WP_108744670.1|18424_21367_+|tail	phage tail tape measure protein	tail	A0A2K9VGW0	Faecalibacterium_phage	39.0	4.0e-63
WP_050505250.1|21421_21850_+|tail	phage tail protein	tail	A0A219YA28	Aeromonas_phage	46.8	7.9e-29
WP_031855817.1|21849_22053_+|tail	tail protein X	tail	A0A0F7LCN2	Escherichia_phage	50.7	6.0e-11
WP_108744671.1|22136_23108_+	hypothetical protein	NA	A0A219Y8Z2	Aeromonas_phage	40.9	6.5e-63
