assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003076295.1_ASM307629v1	NZ_CP029001	Trueperella pyogenes strain TP4479 chromosome, complete genome	1	436367-439628	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,DEDDh,cas4,WYL,DinG	Type I-E	GGCTCATCCCCGCCTGCGCGGGGACCAC,GGCTCATCCCCGCCTGCGCGGGGACCAC,GGCTCATCCCCGCCTGCGCGGGGACCAC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	53,53,52	53	TypeI-E	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,DEDDh,cas4,WYL,DinG	NA,NA	NA|911aa|up_9|NZ_CP029001.1_423495_426228_-	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional	NA|434aa|up_8|NZ_CP029001.1_427329_428631_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|425aa|up_7|NZ_CP029001.1_428715_429990_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|299aa|up_6|NZ_CP029001.1_429992_430889_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|292aa|up_5|NZ_CP029001.1_430897_431773_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|566aa|up_4|NZ_CP029001.1_431826_433524_+	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins	NA|205aa|up_3|NZ_CP029001.1_433789_434404_+	pfam01381, HTH_3, Helix-turn-helix	NA|288aa|up_2|NZ_CP029001.1_434657_435521_+	pfam07751, Abi_2, Abi-like protein	NA|68aa|up_1|NZ_CP029001.1_435668_435872_+	pfam03693, ParD_antitoxin, Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH	NA|99aa|up_0|NZ_CP029001.1_435899_436196_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	cas2|115aa|down_0|NZ_CP029001.1_439802_440147_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|311aa|down_1|NZ_CP029001.1_440151_441084_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|223aa|down_2|NZ_CP029001.1_441086_441755_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|235aa|down_3|NZ_CP029001.1_441754_442459_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|381aa|down_4|NZ_CP029001.1_442462_443605_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|215aa|down_5|NZ_CP029001.1_443614_444259_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|566aa|down_6|NZ_CP029001.1_444285_445983_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|952aa|down_7|NZ_CP029001.1_446266_449122_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|90aa|down_8|NZ_CP029001.1_449573_449843_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|67aa|down_9|NZ_CP029001.1_450012_450213_+	pfam00665, rve, Integrase core domain
GCF_003076295.1_ASM307629v1	NZ_CP029001	Trueperella pyogenes strain TP4479 chromosome, complete genome	2	1218735-1218807	2	CRISPRCasFinder	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,DEDDh,cas4,WYL,DinG	Orphan	TCGGCTGCGTCTTTTTCGGCTGTCT	25	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,DEDDh,cas4,WYL,DinG	NA|294aa|up_0|NZ_CP029001.1_1216965_1217847_+,NA|181aa|down_6|NZ_CP029001.1_1227857_1228400_+	NA|276aa|up_9|NZ_CP029001.1_1205284_1206112_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|417aa|up_8|NZ_CP029001.1_1206280_1207531_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|389aa|up_7|NZ_CP029001.1_1207654_1208821_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|368aa|up_6|NZ_CP029001.1_1208853_1209957_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|424aa|up_5|NZ_CP029001.1_1209953_1211225_-	pfam13224, DUF4032, Domain of unknown function (DUF4032)	NA|396aa|up_4|NZ_CP029001.1_1211359_1212547_-	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|513aa|up_3|NZ_CP029001.1_1212805_1214344_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|275aa|up_2|NZ_CP029001.1_1214416_1215241_+	cd03019, DsbA_DsbA, DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold	NA|299aa|up_1|NZ_CP029001.1_1216067_1216964_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|294aa|up_0|NZ_CP029001.1_1216965_1217847_+	NA	NA|409aa|down_0|NZ_CP029001.1_1219688_1220915_-	cd06174, MFS, Major Facilitator Superfamily	NA|444aa|down_1|NZ_CP029001.1_1221120_1222452_+	pfam07221, GlcNAc_2-epim, N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)	NA|223aa|down_2|NZ_CP029001.1_1222474_1223143_-	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|100aa|down_3|NZ_CP029001.1_1223230_1223530_+	pfam11662, DUF3263, Protein of unknown function (DUF3263)	NA|204aa|down_4|NZ_CP029001.1_1223539_1224151_+	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|542aa|down_5|NZ_CP029001.1_1224419_1226045_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|181aa|down_6|NZ_CP029001.1_1227857_1228400_+	NA	NA|338aa|down_7|NZ_CP029001.1_1228806_1229820_-	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown]	NA|263aa|down_8|NZ_CP029001.1_1229922_1230711_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|241aa|down_9|NZ_CP029001.1_1230707_1231430_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
