The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP029115	Escherichia coli strain AR435 chromosome, complete genome	4831922	197056	280565	4831922	integrase,transposase,holin,portal,tRNA,capsid,lysis,protease,plate,terminase,tail,head	Escherichia_phage(52.0%)	91	190264:190281	282141:282158
190264:190281	attL	CAGCGGCATCTCTTCGGG	NA	NA	NA	NA
WP_000560983.1|197056_197494_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_001297068.1|197538_198480_+	fatty acid biosynthesis protein FabY	NA	NA	NA	NA	NA
WP_001295676.1|199332_199551_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_001086388.1|199768_200011_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000027703.1|200340_201270_-	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA	NA
WP_000829013.1|201266_201902_-	formate dehydrogenase cytochrome b556 subunit	NA	NA	NA	NA	NA
WP_000331377.1|201898_202801_-	formate dehydrogenase O subunit beta	NA	NA	NA	NA	NA
WP_077248221.1|202813_205864_-	formate dehydrogenase-N subunit alpha	NA	A0A077SK27	Escherichia_phage	23.8	1.1e-07
WP_000753617.1|206057_206891_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA	NA
WP_001295677.1|207043_208099_+	YiiG family protein	NA	NA	NA	NA	NA
WP_000931299.1|208148_209897_-	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_001019486.1|209896_210967_-	aminopeptidase	NA	NA	NA	NA	NA
WP_000446015.1|210956_212408_-	PTS fructose-like transporter subunit IIBC	NA	NA	NA	NA	NA
WP_000729595.1|212418_212865_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000619493.1|213165_213480_-	L-rhamnose mutarotase	NA	NA	NA	NA	NA
WP_001179741.1|213489_214314_-	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA	NA
WP_001311268.1|214764_216024_-	L-rhamnose isomerase	NA	NA	NA	NA	NA
WP_000144073.1|216020_217490_-	rhamnulokinase	NA	NA	NA	NA	NA
WP_000217137.1|217777_218614_+	HTH-type transcriptional activator RhaS	NA	NA	NA	NA	NA
WP_000863142.1|218597_219536_+	HTH-type transcriptional activator RhaR	NA	NA	NA	NA	NA
WP_000063517.1|219532_220567_-	L-rhamnose/proton symporter RhaT	NA	NA	NA	NA	NA
WP_000122641.1|220851_221472_+	superoxide dismutase [Mn]	NA	Q56AR7	Bacillus_thuringiensis_phage	59.3	8.4e-64
WP_001166063.1|221731_222715_+	2-keto-3-deoxygluconate transporter	NA	NA	NA	NA	NA
WP_001270260.1|222863_223538_+	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA	NA
WP_000580417.1|223643_225017_-	envelope stress sensor histidine kinase CpxA	NA	W8CYF6	Bacillus_phage	25.9	3.8e-16
WP_001033722.1|225013_225712_-	envelope stress response regulator transcription factor CpxR	NA	Q6XM27	Feldmannia_irregularis_virus	30.3	5.3e-06
WP_001223800.1|225861_226362_+	cell-envelope stress modulator CpxP	NA	NA	NA	NA	NA
WP_000985246.1|226548_227529_-|integrase	tyrosine-type recombinase/integrase	integrase	S4TP66	Salmonella_phage	100.0	4.7e-186
WP_000777029.1|227598_227892_-	helix-turn-helix domain-containing protein	NA	Q1JS37	Enterobacteria_phage	100.0	2.7e-49
WP_001308179.1|228028_228301_+	hypothetical protein	NA	Q1JS36	Enterobacteria_phage	100.0	1.4e-47
WP_000217670.1|228470_228971_+	hypothetical protein	NA	M1SV55	Escherichia_phage	100.0	2.6e-92
WP_000557703.1|229034_229259_+	DUF2732 family protein	NA	S4TP68	Salmonella_phage	100.0	4.7e-33
WP_001277952.1|229258_229561_+	DUF5405 family protein	NA	A0A0F7LDT6	Escherichia_phage	96.0	2.5e-45
WP_001113270.1|229560_229785_+	TraR/DksA family transcriptional regulator	NA	A0A0F7LDI3	Escherichia_phage	98.6	3.8e-35
WP_000027659.1|229781_230057_+	DUF5405 family protein	NA	A0A0F7LCM4	Escherichia_phage	100.0	2.3e-45
WP_002431311.1|231531_233073_+|transposase	IS21-like element ISEc12 family transposase	transposase	K4I413	Acidithiobacillus_phage	46.4	1.3e-129
WP_001016257.1|233087_233834_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	31.6	3.5e-24
WP_000012516.1|235151_237635_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_000038166.1|238006_239041_-|portal	phage portal protein	portal	U5N087	Enterobacteria_phage	99.1	1.6e-200
WP_000156872.1|239040_240813_-|terminase	terminase ATPase subunit family protein	terminase	A0A0F7LCK3	Escherichia_phage	100.0	0.0e+00
WP_001085956.1|240986_241841_+|capsid	GPO family capsid scaffolding protein	capsid	Q778Z1	Enterobacteria_phage	99.6	1.7e-136
WP_001248567.1|241899_242973_+|capsid	phage major capsid protein, P2 family	capsid	Q94MI3	Enterobacteria_phage	98.9	2.2e-200
WP_024176422.1|242976_243720_+|terminase	terminase endonuclease subunit	terminase	Q94MJ2	Enterobacteria_phage	96.4	4.6e-125
WP_000988633.1|243819_244329_+|head	head completion/stabilization protein	head	U5N0S3	Enterobacteria_phage	100.0	1.1e-90
WP_000846414.1|244328_244532_+|tail	tail protein X	tail	A0A0F7LCN2	Escherichia_phage	98.5	2.6e-30
WP_000123123.1|244535_244817_+|holin	holin	holin	A0A0F7LA12	Escherichia_phage	100.0	1.3e-43
WP_001144097.1|244816_245314_+	glycoside hydrolase family 104 protein	NA	A0A0F7LBS0	Escherichia_phage	99.4	1.5e-92
WP_000736582.1|245328_245754_+	hypothetical protein	NA	A0A0F7LBP4	Escherichia_phage	92.9	3.7e-55
WP_000040631.1|245741_246167_+|lysis	LysB family phage lysis regulatory protein	lysis	A0A0F7L9Y0	Escherichia_phage	94.3	1.3e-63
WP_000917160.1|246274_246742_+|tail	phage tail protein	tail	A0A0F7LA33	Escherichia_phage	98.7	3.3e-81
WP_001001770.1|246734_247187_+	phage virion morphogenesis protein	NA	A0A0F7LDR6	Escherichia_phage	97.3	4.5e-75
WP_001093698.1|247253_247889_+|plate	phage baseplate assembly protein V	plate	U5N3F0	Enterobacteria_phage	98.1	2.5e-111
WP_000127167.1|247885_248233_+|plate	baseplate assembly protein	plate	A0A0F7LDQ1	Escherichia_phage	99.1	3.8e-58
WP_001121501.1|248237_249146_+|plate	baseplate assembly protein	plate	U5N3T9	Enterobacteria_phage	99.3	3.7e-161
WP_001285346.1|249138_249750_+|tail	phage tail protein I	tail	A0A0F7LA36	Escherichia_phage	99.5	1.4e-116
WP_108703239.1|249746_251042_+|tail	phage tail protein	tail	A0A0F7LBW5	Escherichia_phage	96.5	7.9e-141
WP_001032315.1|251044_251461_+|tail	tail fiber assembly protein	tail	B6SCW7	Bacteriophage	46.0	3.4e-21
WP_024176421.1|251432_252035_-|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	75.5	2.5e-81
WP_001333405.1|252049_252565_-|tail	tail fiber protein	tail	A0A0F7LCR3	Escherichia_phage	56.8	5.0e-46
WP_000839179.1|252706_253111_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZCV4	Stx2-converting_phage	100.0	3.0e-70
WP_000612626.1|253107_253455_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	100.0	2.6e-62
WP_001333339.1|253503_255039_+|transposase	IS66-like element ISEc22 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	99.4	3.5e-289
WP_062914736.1|255046_255649_+	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	95.3	3.5e-99
WP_001286718.1|255708_256899_+|tail	phage tail sheath protein	tail	A0A0F7LBW9	Escherichia_phage	99.7	3.7e-225
WP_001251408.1|256911_257430_+|tail	phage major tail tube protein	tail	A0A0F7LDZ1	Escherichia_phage	100.0	1.4e-93
WP_001031307.1|257486_257762_+|tail	phage tail assembly protein	tail	A0A0F7LDQ8	Escherichia_phage	98.9	2.2e-40
WP_000785970.1|257794_257914_+|tail	GpE family phage tail protein	tail	A0A0F7LCR6	Escherichia_phage	100.0	1.0e-15
WP_000069960.1|257906_260354_+|tail	phage tail tape measure protein	tail	M1T2S3	Escherichia_phage	95.2	0.0e+00
WP_000978889.1|260368_260848_+|tail	phage tail protein	tail	A0A0F7LDE8	Escherichia_phage	99.4	1.5e-84
WP_000882940.1|260847_262011_+	phage late control D family protein	NA	U5N3V4	Enterobacteria_phage	99.5	4.8e-206
WP_000468308.1|262092_262311_+	prophage transcriptional regulator OgrK	NA	A0A0F7LDQ9	Escherichia_phage	100.0	4.7e-38
WP_085947770.1|262383_263752_+|transposase	IS3-like element IS150 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	100.0	1.3e-112
WP_001145759.1|264026_264539_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001076742.1|264746_265649_+	CDF family cation-efflux transporter FieF	NA	NA	NA	NA	NA
WP_000591795.1|265829_266792_+	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_001045683.1|267111_268101_+	sulfate/thiosulfate ABC transporter substrate-binding protein Sbp	NA	NA	NA	NA	NA
WP_001326656.1|268207_268963_+	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA	NA
WP_001216327.1|269017_269785_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_000802214.1|269892_270492_-	YiiQ family protein	NA	NA	NA	NA	NA
WP_000155257.1|270592_271033_+	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_000655989.1|271244_271544_+	DUF406 domain-containing protein	NA	NA	NA	NA	NA
WP_000323547.1|271570_271999_+	universal stress protein UspD	NA	NA	NA	NA	NA
WP_000796332.1|272003_272750_-	ferredoxin--NADP(+) reductase	NA	NA	NA	NA	NA
WP_001250644.1|272846_273857_-	class II fructose-bisphosphatase	NA	NA	NA	NA	NA
WP_000136788.1|273991_275500_-	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_000084268.1|275522_276368_-	glycerol uptake facilitator protein GlpF	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	28.0	4.4e-15
WP_001296623.1|276792_277038_+	septal ring assembly protein ZapB	NA	NA	NA	NA	NA
WP_000872908.1|277122_277608_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA	NA
WP_000139496.1|277700_278627_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_001293341.1|278693_280025_-	HslU--HslV peptidase ATPase subunit	NA	A0A191ZC11	Erwinia_phage	29.9	1.7e-45
WP_000208242.1|280034_280565_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
282141:282158	attR	CAGCGGCATCTCTTCGGG	NA	NA	NA	NA
>prophage 2
NZ_CP029115	Escherichia coli strain AR435 chromosome, complete genome	4831922	994526	1067367	4831922	transposase,plate,tRNA,protease	uncultured_Caudovirales_phage(20.0%)	59	NA	NA
WP_001295561.1|994526_995879_+|protease	sigma E protease regulator RseP	protease	NA	NA	NA	NA
WP_001240896.1|995908_998341_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_000758956.1|998462_998948_+	molecular chaperone Skp	NA	NA	NA	NA	NA
WP_001139279.1|998951_999977_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_000210739.1|1000081_1000537_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_000565966.1|1000540_1001329_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_000139654.1|1001328_1002477_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_000569430.1|1002473_1003070_+	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	40.0	1.0e-26
WP_001294757.1|1003106_1006589_+	DNA polymerase III subunit alpha	NA	Q8W6C3	Saccharomonospora_phage	36.9	2.2e-209
WP_000055741.1|1006601_1007561_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA	NA
WP_001020973.1|1007659_1009801_+	lysine decarboxylase LdcC	NA	NA	NA	NA	NA
WP_000901099.1|1009857_1010247_+	VOC family protein	NA	NA	NA	NA	NA
WP_000176549.1|1010311_1011610_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_000062312.1|1011658_1011919_-	Rho-binding antiterminator	NA	NA	NA	NA	NA
WP_000417058.1|1011905_1012106_-	YaeP family protein	NA	NA	NA	NA	NA
WP_001185290.1|1012271_1012817_+	YaeQ family protein	NA	NA	NA	NA	NA
WP_000635537.1|1012813_1013236_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_000239163.1|1013249_1013960_+	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA	NA
WP_001336393.1|1014159_1014984_-	YaeF family permuted papain-like enzyme	NA	NA	NA	NA	NA
WP_001260712.1|1015037_1016756_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000094011.1|1016867_1017575_-|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
WP_001202329.1|1017571_1017976_-	Rcs stress response system protein RcsF	NA	NA	NA	NA	NA
WP_000874226.1|1018093_1018909_-	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA	NA
WP_001294600.1|1018948_1019602_-	methionine ABC transporter permease MetI	NA	NA	NA	NA	NA
WP_000594006.1|1019594_1020626_-	methionine ABC transporter ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	39.7	9.4e-36
WP_001140187.1|1020813_1021389_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_000997010.1|1027146_1027950_+	2,5-didehydrogluconate reductase DkgB	NA	A0A1V0SDE7	Indivirus	36.2	2.4e-39
WP_000648572.1|1027946_1028861_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001230983.1|1029101_1029902_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_000016007.1|1029905_1030529_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_000644685.1|1030576_1031935_-	murein transglycosylase D	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	36.0	5.8e-09
WP_001052715.1|1032006_1032762_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_001326702.1|1032795_1033518_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000917883.1|1033514_1033982_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	58.7	1.0e-50
WP_001340895.1|1034046_1034778_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	39.0	4.5e-40
WP_001086141.1|1035314_1036100_+	lipoprotein	NA	NA	NA	NA	NA
WP_001236653.1|1036236_1036716_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000908066.1|1036725_1037640_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001284199.1|1037683_1038166_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_001087741.1|1038189_1039542_-	membrane protein	NA	NA	NA	NA	NA
WP_122545204.1|1039552_1042987_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_001240525.1|1043095_1044508_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_000088852.1|1044512_1045256_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
WP_000614325.1|1045252_1048018_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	30.8	1.8e-81
WP_000343289.1|1048026_1048788_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_000246443.1|1048792_1050124_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_001080149.1|1050126_1050651_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_001113709.1|1050647_1051928_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_000348793.1|1051952_1053035_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_000393852.1|1052998_1054849_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_000611744.1|1054852_1055266_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_000056989.1|1055272_1056748_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_000123970.1|1056798_1057023_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000037397.1|1057057_1057558_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_001142958.1|1058252_1058771_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_032329316.1|1058980_1061122_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	25.0	2.4e-25
WP_039023185.1|1061197_1065430_+	RHS repeat protein	NA	A0A2H4JHK7	uncultured_Caudovirales_phage	43.1	6.4e-22
WP_001101839.1|1065407_1065800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000420818.1|1066230_1067367_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP029115	Escherichia coli strain AR435 chromosome, complete genome	4831922	1075625	1136300	4831922	integrase,transposase,portal,lysis,protease,terminase,tail	Enterobacteria_phage(42.31%)	69	1068972:1068987	1144617:1144632
1068972:1068987	attL	GCGGCTTCATCTTTAT	NA	NA	NA	NA
WP_000006255.1|1075625_1076123_+|transposase	REP-associated tyrosine transposase RayT	transposase	NA	NA	NA	NA
WP_001334802.1|1076346_1078086_-	flagellar type III secretion system protein FlhA	NA	NA	NA	NA	NA
WP_000207552.1|1078030_1078816_+	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA	NA
WP_001226164.1|1078886_1079942_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000554758.1|1079993_1080287_+	type I toxin-antitoxin system antitoxin YafN	NA	NA	NA	NA	NA
WP_001263489.1|1080289_1080688_+	type II toxin-antitoxin system mRNA interferase toxin YafO	NA	NA	NA	NA	NA
WP_001059892.1|1080697_1081150_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001295202.1|1081455_1081722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001326471.1|1081654_1082191_+	peptide chain release factor H	NA	NA	NA	NA	NA
WP_001292994.1|1082247_1083705_-	cytosol nonspecific dipeptidase	NA	NA	NA	NA	NA
WP_001291990.1|1083965_1084424_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000189532.1|1084515_1085760_+	esterase FrsA	NA	NA	NA	NA	NA
WP_000174677.1|1085817_1086219_+	sigma factor-binding protein Crl	NA	NA	NA	NA	NA
WP_039023169.1|1086257_1087313_-	phosphoporin PhoE	NA	Q1MVN1	Enterobacteria_phage	60.9	2.0e-118
WP_001285288.1|1087600_1088704_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.1e-61
WP_000893278.1|1088715_1089969_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.2	9.8e-96
WP_039023168.1|1090173_1091337_-|integrase	site-specific integrase	integrase	U5P434	Shigella_phage	99.2	1.7e-227
WP_000433939.1|1091213_1091564_-	helix-turn-helix domain-containing protein	NA	U5P4J3	Shigella_phage	100.0	4.9e-61
WP_000206737.1|1091563_1091869_-	hypothetical protein	NA	U5P0J0	Shigella_phage	98.0	5.8e-50
WP_001242749.1|1091868_1092231_-	phage protein	NA	U5P092	Shigella_phage	100.0	2.1e-67
WP_000008200.1|1092221_1092758_-	5'-deoxynucleotidase	NA	U5P0T3	Shigella_phage	100.0	4.3e-101
WP_000081287.1|1092885_1093710_-	DUF2303 family protein	NA	U5P439	Shigella_phage	100.0	6.0e-150
WP_000135680.1|1093775_1094138_-	hypothetical protein	NA	Q8SBF8	Shigella_phage	100.0	8.6e-61
WP_001020632.1|1094840_1095533_-	helix-turn-helix transcriptional regulator	NA	S5FUZ3	Shigella_phage	96.5	6.4e-121
WP_032198020.1|1095630_1095891_+	helix-turn-helix transcriptional regulator	NA	K7PJQ8	Enterobacteria_phage	98.8	7.1e-41
WP_032198019.1|1095883_1096435_+	hypothetical protein	NA	U5P4K1	Shigella_phage	98.9	3.8e-100
WP_001250272.1|1096610_1096790_+	DUF4222 domain-containing protein	NA	S5M7S5	Escherichia_phage	68.5	7.8e-15
WP_039023167.1|1096779_1097766_+	helix-turn-helix domain-containing protein	NA	U5P0A0	Shigella_phage	87.8	1.4e-134
WP_001393497.1|1097762_1098257_+	PerC family transcriptional regulator	NA	A0A0P0ZCF0	Stx2-converting_phage	98.1	1.2e-86
WP_001377816.1|1098256_1098910_+	phage N-6-adenine-methyltransferase	NA	A5LH72	Enterobacteria_phage	98.6	8.1e-126
WP_000210170.1|1098906_1099233_+	LexA family transcriptional regulator	NA	A0A291AWY9	Escherichia_phage	100.0	5.4e-54
WP_000767113.1|1099229_1099619_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A0P0ZD39	Stx2-converting_phage	100.0	7.1e-69
WP_024227971.1|1099638_1100448_+	KilA-N domain-containing protein	NA	A0A291AWU7	Escherichia_phage	98.1	1.4e-148
WP_039023166.1|1100455_1101445_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	98.5	7.5e-192
WP_085949407.1|1101459_1101828_+	antitermination protein Q	NA	A5LH77	Enterobacteria_phage	87.5	9.4e-55
WP_001208502.1|1101863_1102313_-	hypothetical protein	NA	A5LH78	Enterobacteria_phage	43.8	8.0e-24
WP_001446998.1|1102334_1103276_-	hypothetical protein	NA	A5LH79	Enterobacteria_phage	44.2	5.0e-68
WP_000917724.1|1103544_1103748_+	hypothetical protein	NA	A0A291AWX6	Escherichia_phage	100.0	6.1e-32
WP_000799656.1|1103898_1104951_+	site-specific DNA-methyltransferase	NA	A5LH81	Enterobacteria_phage	100.0	2.7e-208
WP_000839596.1|1105018_1105234_+|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	100.0	9.0e-34
WP_001135250.1|1105233_1105731_+	lysozyme RrrD	NA	A0A291AWW2	Escherichia_phage	100.0	4.5e-92
WP_001341210.1|1105727_1106195_+|lysis	lysis protein	lysis	A0A291AWW3	Escherichia_phage	100.0	7.7e-78
WP_021512737.1|1106182_1106335_+	hypothetical protein	NA	A0A291AWZ2	Escherichia_phage	98.0	4.7e-21
WP_000349509.1|1107010_1107502_+	DUF1441 family protein	NA	A0A291AWV8	Escherichia_phage	87.2	1.3e-72
WP_025670557.1|1107501_1109604_+|terminase	phage terminase large subunit family protein	terminase	A0A291AWY5	Escherichia_phage	97.1	0.0e+00
WP_001072975.1|1109600_1109813_+	hypothetical protein	NA	A5LH28	Enterobacteria_phage	100.0	1.1e-31
WP_052249886.1|1109812_1111282_+|portal	phage portal protein	portal	K7PJP3	Enterobacteria_phage	99.8	3.1e-282
WP_023277783.1|1111265_1113293_+|protease	Clp protease ClpP	protease	A0A291AWT6	Escherichia_phage	99.4	0.0e+00
WP_023140705.1|1113379_1113703_+	DUF2190 family protein	NA	A0A291AWX2	Escherichia_phage	99.1	8.5e-52
WP_001283153.1|1113695_1113971_+	DNA breaking-rejoining protein	NA	K7PH43	Enterobacteria_phage	100.0	2.3e-45
WP_023140704.1|1113982_1114561_+|tail	phage tail protein	tail	A5LH33	Enterobacteria_phage	99.5	1.2e-101
WP_001079419.1|1114557_1114959_+|tail	tail protein	tail	A5LH34	Enterobacteria_phage	99.2	1.9e-72
WP_021560209.1|1114969_1115713_+|tail	phage tail protein	tail	A5LH35	Enterobacteria_phage	99.2	2.3e-132
WP_001300035.1|1115773_1116160_+|tail	phage minor tail protein G	tail	A0A291AWW5	Escherichia_phage	100.0	1.6e-65
WP_001161009.1|1116168_1116498_+|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	100.0	7.6e-56
WP_039023165.1|1116469_1119535_+|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	99.2	0.0e+00
WP_039023164.1|1119534_1119864_+|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	99.1	1.7e-60
WP_001152385.1|1119873_1120572_+|tail	phage minor tail protein L	tail	A5LH40	Enterobacteria_phage	100.0	6.0e-135
WP_032151194.1|1120577_1121321_+|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	96.0	2.3e-148
WP_032158484.1|1121218_1121866_+|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	95.3	6.2e-110
WP_039023163.1|1121926_1125424_+	host specificity protein J	NA	A5LH43	Enterobacteria_phage	97.0	0.0e+00
WP_001230375.1|1125493_1126093_+	Ail/Lom family protein	NA	A0A291AWV3	Escherichia_phage	98.5	5.7e-110
WP_086708942.1|1126157_1129916_+	peptidase S74	NA	A0A2D1UII2	Escherichia_phage	93.4	0.0e+00
WP_072240810.1|1129970_1130099_+|tail	phage tail protein	tail	K7PMH7	Enterobacteria_phage	84.6	1.7e-11
WP_039023230.1|1130776_1131658_+	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_000371964.1|1131635_1132217_+	SLATT domain-containing protein	NA	NA	NA	NA	NA
WP_039023231.1|1132912_1133110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039023233.1|1133610_1134453_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000772656.1|1135091_1136300_+|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	56.5	7.7e-130
1144617:1144632	attR	GCGGCTTCATCTTTAT	NA	NA	NA	NA
>prophage 4
NZ_CP029115	Escherichia coli strain AR435 chromosome, complete genome	4831922	2067509	2123551	4831922	integrase,holin,portal,capsid,tRNA,terminase,tail,head	Escherichia_phage(44.44%)	62	2062604:2062618	2069084:2069098
2062604:2062618	attL	GATCGCGATGTACGC	NA	NA	NA	NA
WP_000074971.1|2067509_2068628_-|integrase	tyrosine-type recombinase/integrase	integrase	Q77Z04	Phage_21	44.4	1.6e-84
WP_000003742.1|2068596_2068866_-	excisionase	NA	NA	NA	NA	NA
WP_000102136.1|2068927_2071369_-	exonuclease	NA	V5UQJ3	Shigella_phage	46.9	3.1e-114
2069084:2069098	attR	GCGTACATCGCGATC	NA	NA	NA	NA
WP_001070255.1|2071462_2071654_-	DUF1482 family protein	NA	NA	NA	NA	NA
WP_000854558.1|2071650_2071839_-	cell division inhibition protein DicB	NA	NA	NA	NA	NA
WP_001517906.1|2072239_2072443_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001171946.1|2072407_2072626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001092153.1|2072718_2072919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001420344.1|2073350_2073689_-	peptidase S24	NA	H9C160	Pectobacterium_phage	32.0	2.5e-06
WP_000747951.1|2074080_2074323_+	hypothetical protein	NA	H9C161	Pectobacterium_phage	55.8	4.8e-07
WP_000693850.1|2074306_2074732_+	Rha family transcriptional regulator	NA	NA	NA	NA	NA
WP_001262390.1|2074803_2075874_+	hypothetical protein	NA	A0A088CD36	Shigella_phage	56.6	2.6e-52
WP_001151150.1|2075914_2076337_+	DUF977 family protein	NA	A0A0U2QQN3	Escherichia_phage	90.6	2.6e-64
WP_000761441.1|2076337_2076751_+	hypothetical protein	NA	A0A2R2Z307	Escherichia_phage	99.2	2.0e-58
WP_001224662.1|2076844_2077027_+	hypothetical protein	NA	A0A2R2Z308	Escherichia_phage	100.0	1.4e-27
WP_011076332.1|2077640_2077859_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001013636.1|2078061_2078274_+	type I toxin-antitoxin system Hok family toxin	NA	A0A0U2QV81	Escherichia_phage	96.9	8.9e-26
WP_032155008.1|2078441_2078720_+	hypothetical protein	NA	A0A077KB22	Edwardsiella_phage	37.1	6.1e-06
WP_001221526.1|2078721_2079780_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	48.0	7.5e-89
WP_000139999.1|2079780_2080161_+	RusA family crossover junction endodeoxyribonuclease	NA	V5URS4	Shigella_phage	63.6	1.3e-35
WP_000762879.1|2080157_2080979_+	antitermination protein	NA	K7P7B9	Enterobacteria_phage	58.2	5.1e-77
WP_106104550.1|2081373_2081460_+	DUF3927 family protein	NA	NA	NA	NA	NA
WP_001333559.1|2081948_2082161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001333560.1|2082231_2082567_-	anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	74.8	1.4e-44
WP_000874243.1|2082827_2083016_+	DUF1737 domain-containing protein	NA	H6WZJ9	Escherichia_phage	95.2	7.2e-27
WP_001333561.1|2083012_2083174_+	hypothetical protein	NA	Q08JA2	Stx2-converting_phage	87.0	5.9e-14
WP_000372595.1|2083323_2083539_+|holin	holin	holin	A0A2R2Z340	Escherichia_phage	98.6	3.4e-33
WP_000193264.1|2083543_2083894_+	YdfR family protein	NA	K7PGU6	Enterobacteria_phage	94.0	1.4e-36
WP_000992097.1|2083957_2084491_+	lysozyme	NA	Q08J98	Stx2-converting_phage	93.2	1.5e-98
WP_075202333.1|2084707_2084890_+	hypothetical protein	NA	A0A0P0ZE50	Stx2-converting_phage	77.0	2.2e-17
WP_000738421.1|2084980_2085274_-	increased serum survival lipoprotein Iss	NA	K7PL54	Enterobacteria_phage	90.7	5.9e-44
WP_001135104.1|2085799_2086150_+	HNH endonuclease	NA	A0A1B5FP94	Escherichia_phage	96.6	8.0e-64
WP_001333563.1|2086297_2086780_+|terminase	phage terminase small subunit P27 family	terminase	A0A1B5FPA0	Escherichia_phage	98.1	8.7e-85
WP_001140892.1|2086779_2088537_+|terminase	terminase large subunit	terminase	A0A1B5FP96	Escherichia_phage	99.3	0.0e+00
WP_000923134.1|2088684_2089911_+|portal	phage portal protein	portal	Q8SBI0	Shigella_phage	83.3	3.7e-204
WP_000766109.1|2090516_2091734_+|capsid	phage major capsid protein	capsid	A0A1W6JP20	Morganella_phage	71.6	5.9e-162
WP_000719064.1|2091810_2092128_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A1W6JNZ5	Morganella_phage	49.5	5.3e-22
WP_001147814.1|2092136_2092475_+|head	phage head closure protein	head	A0A1B5FP90	Escherichia_phage	90.2	7.5e-51
WP_000968644.1|2092471_2092921_+	HK97 gp10 family phage protein	NA	S4TR46	Salmonella_phage	81.2	6.1e-64
WP_001206700.1|2092917_2093262_+	DUF3168 domain-containing protein	NA	A0A1B5FP84	Escherichia_phage	96.5	5.1e-55
WP_000097535.1|2093322_2094027_+	hypothetical protein	NA	A0A1B5FP82	Escherichia_phage	92.7	1.4e-112
WP_001324129.1|2094026_2094413_+|tail	tail assembly protein	tail	A0A1B5FP91	Escherichia_phage	100.0	8.9e-64
WP_077253127.1|2094454_2094715_+	DUF4035 domain-containing protein	NA	A0A1B5FP87	Escherichia_phage	95.3	2.3e-39
WP_000224003.1|2094761_2097989_+|tail	phage tail tape measure protein	tail	A0A1B5FPE2	Escherichia_phage	95.0	0.0e+00
WP_001330090.1|2097966_2098323_+|tail	tail protein	tail	A0A0P0ZDL9	Stx2-converting_phage	66.7	2.8e-40
WP_001152457.1|2098322_2099021_+|tail	phage minor tail protein L	tail	A0A1B5FP81	Escherichia_phage	97.0	3.4e-130
WP_001333568.1|2099026_2099770_+|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	97.2	4.5e-149
WP_000090843.1|2099706_2100315_+|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	94.1	1.9e-100
WP_000515345.1|2100375_2103855_+	host specificity protein J	NA	A0A291AWT4	Escherichia_phage	89.9	0.0e+00
WP_001233546.1|2103922_2104522_+	Ail/Lom family outer membrane beta-barrel protein	NA	H6WZM8	Escherichia_phage	95.0	1.6e-107
WP_001189123.1|2108475_2109984_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	31.8	3.6e-44
WP_042047081.1|2111397_2111928_+	chaperone of endosialidase	NA	A0A2D1UII2	Escherichia_phage	85.2	2.5e-69
WP_000241001.1|2112165_2112834_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000799406.1|2113388_2114252_-	spermidine/putrescine ABC transporter permease PotB	NA	Q6GZ02	Mycoplasma_phage	28.7	6.7e-11
WP_000531594.1|2114235_2115372_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	NA	Q6GZ03	Mycoplasma_phage	39.8	5.5e-29
WP_000359434.1|2115621_2116848_+	peptidase T	NA	NA	NA	NA	NA
WP_000456506.1|2116896_2118018_-	[50S ribosomal protein L16]-arginine 3-hydroxylase	NA	NA	NA	NA	NA
WP_000735412.1|2118093_2119554_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA	NA
WP_001265471.1|2119553_2120225_-	two-component system response regulator PhoP	NA	NA	NA	NA	NA
WP_000423742.1|2120393_2121764_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	44.9	1.2e-107
WP_001297479.1|2121767_2122409_-	high frequency lysogenization protein HflD	NA	NA	NA	NA	NA
WP_001297484.1|2122444_2123551_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
>prophage 5
NZ_CP029115	Escherichia coli strain AR435 chromosome, complete genome	4831922	2951236	3022509	4831922	integrase,coat,transposase	Stx2-converting_phage(20.0%)	64	3005826:3005841	3028698:3028713
WP_002431311.1|2951236_2952778_-|transposase	IS21-like element ISEc12 family transposase	transposase	K4I413	Acidithiobacillus_phage	46.4	1.3e-129
WP_108703246.1|2952971_2955788_+	autotransporter adhesin Ag43	NA	NA	NA	NA	NA
WP_001323397.1|2955858_2956017_+	DUF905 family protein	NA	NA	NA	NA	NA
WP_001234729.1|2956171_2956990_+	DUF945 domain-containing protein	NA	A0A2C9CX26	Yersinia_phage	40.1	4.2e-47
WP_000855059.1|2957331_2957805_+	antirestriction protein	NA	A9J566	Pseudomonas_phage	30.3	1.5e-12
WP_001424026.1|2957820_2958297_+	RadC family protein	NA	NA	NA	NA	NA
WP_000692345.1|2958365_2958587_+	DUF987 domain-containing protein	NA	A0A142F0X9	Klebsiella_phage	45.8	1.9e-10
WP_001295723.1|2958749_2959118_+	antitoxin	NA	NA	NA	NA	NA
WP_000854761.1|2959207_2959585_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001161660.1|2959796_2959910_+	DUF957 domain-containing protein	NA	NA	NA	NA	NA
WP_001333339.1|2960344_2961880_-|transposase	IS66-like element ISEc22 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	99.4	3.5e-289
WP_000612626.1|2961928_2962276_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	100.0	2.6e-62
WP_000839179.1|2962272_2962677_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZCV4	Stx2-converting_phage	100.0	3.0e-70
WP_001333417.1|2963212_2963560_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_001016348.1|2964013_2964196_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000450409.1|2964296_2964626_-	DUF496 family protein	NA	NA	NA	NA	NA
WP_057109539.1|2964797_2965856_-	FUSC family protein	NA	NA	NA	NA	NA
WP_001105393.1|2966053_2966527_-	DNA gyrase inhibitor SbmC	NA	NA	NA	NA	NA
WP_001310935.1|2967968_2969135_-	serine-type D-Ala-D-Ala carboxypeptidase DacD	NA	B6DZZ7	Stx2-converting_phage	99.0	1.5e-226
WP_000980567.1|2969343_2970771_+	exodeoxyribonuclease I	NA	NA	NA	NA	NA
WP_000985273.1|2970813_2971041_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_000492321.1|2971054_2972113_-	transport protein YeeE	NA	NA	NA	NA	NA
WP_000019197.1|2972291_2973650_-	putrescine/proton symporter PlaP	NA	NA	NA	NA	NA
WP_010723108.1|2973639_2973702_-	membrane protein YoeI	NA	NA	NA	NA	NA
WP_000803351.1|2973916_2974846_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000754749.1|2974891_2975716_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_000767829.1|2975798_2976053_-	type II toxin-antitoxin system mRNA interferase toxin YoeB	NA	NA	NA	NA	NA
WP_001259255.1|2976049_2976301_-	YoeB-YefM toxin-antitoxin system antitoxin YefM	NA	NA	NA	NA	NA
WP_001364200.1|2976584_2976635_+	his operon leader peptide	NA	NA	NA	NA	NA
WP_032329340.1|2976780_2977680_+	ATP phosphoribosyltransferase	NA	A0A0F7Q4B0	Cellulophaga_phage	94.7	1.8e-11
WP_001446927.1|2977685_2978990_+	histidinol dehydrogenase	NA	NA	NA	NA	NA
WP_000108945.1|2978986_2980057_+	histidinol-phosphate transaminase	NA	NA	NA	NA	NA
WP_046464156.1|2980056_2981124_+	bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA	NA
WP_001103561.1|2981123_2981714_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
WP_000586445.1|2981713_2982451_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA	NA
WP_000880176.1|2982432_2983209_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA	NA
WP_000954831.1|2983202_2983811_+	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA	NA	NA	NA	NA
WP_128552998.1|2983849_2984809_-	N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 3-alpha-mannosyltransferase WbdC	NA	NA	NA	NA	NA
WP_000704906.1|2985600_2986767_-	UDP-glucose 6-dehydrogenase	NA	A0A1J0FA55	Only_Syngen_Nebraska_virus	53.7	1.8e-112
WP_049284001.1|2986930_2988301_-	phosphomannomutase CpsG	NA	A0A127AWJ1	Bacillus_phage	25.6	9.3e-31
WP_062914711.1|2988323_2989739_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	30.6	5.8e-52
WP_062914712.1|2989966_2991373_-	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.7	8.0e-38
WP_108703247.1|2993123_2993714_-|coat	spore coat protein CotS	coat	NA	NA	NA	NA
WP_062914714.1|2993932_2994886_-	acyltransferase family protein	NA	NA	NA	NA	NA
WP_062914715.1|2994893_2996642_-	pectate lyase superfamily protein	NA	A0A0A8J9B0	Klebsiella_phage	33.0	7.6e-54
WP_062914716.1|2996662_2997430_-	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_020801633.1|2997439_2998609_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_062914717.1|2998620_2999709_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_062914718.1|2999708_3001001_-	O-antigen ligase	NA	NA	NA	NA	NA
WP_062914719.1|3000957_3002112_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_020801659.1|3002122_3003289_-	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_062914720.1|3003292_3004243_-	polysaccharide pyruvyl transferase	NA	NA	NA	NA	NA
WP_062914721.1|3005102_3007274_-	polysaccharide biosynthesis tyrosine autokinase	NA	NA	NA	NA	NA
3005826:3005841	attL	TCGTTTTCCATTTTTA	NA	NA	NA	NA
WP_020801645.1|3007292_3007724_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_020801619.1|3007730_3008864_-	polysaccharide export protein	NA	NA	NA	NA	NA
WP_062914722.1|3009009_3010443_-	capsule assembly Wzi family protein	NA	NA	NA	NA	NA
WP_160342378.1|3010732_3010855_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108703248.1|3012204_3013356_+|transposase	IS30-like element IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.6	1.5e-42
WP_162497698.1|3013404_3014259_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	44.4	1.1e-66
WP_024189503.1|3014534_3015425_-	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	40.3	9.6e-45
WP_001178345.1|3016177_3018868_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A0R6PEZ3	Moraxella_phage	43.5	5.5e-35
WP_001252306.1|3019319_3021173_-	outer membrane assembly protein AsmA	NA	NA	NA	NA	NA
WP_001234767.1|3021194_3021776_-	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	42.1	1.3e-31
WP_001295424.1|3021867_3022509_-	uridine kinase	NA	A0A1V0SAA3	Catovirus	36.9	3.2e-34
3028698:3028713	attR	TAAAAATGGAAAACGA	NA	NA	NA	NA
>prophage 6
NZ_CP029115	Escherichia coli strain AR435 chromosome, complete genome	4831922	3090607	3100050	4831922		Enterobacteria_phage(85.71%)	10	NA	NA
WP_001551350.1|3090607_3091744_+	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	97.4	5.0e-163
WP_001551351.1|3091740_3093741_+	hypothetical protein	NA	Q9EYF6	Enterobacteria_phage	95.7	0.0e+00
WP_001295429.1|3093865_3094327_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	100.0	1.9e-76
WP_001551352.1|3094368_3094839_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	99.4	5.2e-82
WP_001308766.1|3094885_3095605_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_001295431.1|3095601_3097287_-	two-component regulatory system sensor histidine kinase BtsS	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
WP_001240398.1|3097508_3098240_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.0	2.8e-111
WP_001216963.1|3098299_3098407_+	protein YohO	NA	NA	NA	NA	NA
WP_000783134.1|3098387_3099119_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA	NA
WP_000569343.1|3099123_3100050_-	glycine betaine ABC transporter ATP binding protein YehX	NA	G3M9Y6	Bacillus_virus	30.8	1.3e-23
>prophage 7
NZ_CP029115	Escherichia coli strain AR435 chromosome, complete genome	4831922	3702930	3716113	4831922		Escherichia_phage(50.0%)	12	NA	NA
WP_039023140.1|3702930_3705492_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.6	3.0e-30
WP_001141322.1|3705597_3706254_+	protein-serine/threonine phosphatase	NA	A0A222YWF0	Escherichia_phage	46.3	6.2e-49
WP_001272547.1|3706304_3707102_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.0	1.3e-69
WP_000847984.1|3707267_3708176_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.5	5.1e-118
WP_000590403.1|3708172_3709435_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	61.4	1.7e-135
WP_001278994.1|3709431_3710070_+	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.4e-82
WP_001136934.1|3710074_3710851_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_000104441.1|3710939_3712304_+	GntP family transporter	NA	NA	NA	NA	NA
WP_000081550.1|3712397_3713390_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
WP_001272592.1|3713452_3714592_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	35.6	1.7e-06
WP_000254708.1|3714731_3715358_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.7	5.7e-36
WP_001295182.1|3715351_3716113_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	48.0	3.4e-59
>prophage 1
NZ_CP029113	Escherichia coli strain AR435 plasmid unnamed1, complete sequence	114412	42670	79655	114412	protease,transposase,tRNA	Escherichia_phage(33.33%)	36	NA	NA
WP_039023147.1|42670_43069_-|tRNA	tRNA(fMet)-specific endonuclease VapC	tRNA	NA	NA	NA	NA
WP_039023146.1|43068_43296_-	toxin-antitoxin system antitoxin VapB	NA	NA	NA	NA	NA
WP_039023145.1|43377_48648_+	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA	NA
WP_002431311.1|48923_50465_+|transposase	IS21-like element ISEc12 family transposase	transposase	K4I413	Acidithiobacillus_phage	46.4	1.3e-129
WP_001016257.1|50479_51226_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	48.5	5.0e-55
WP_052273601.1|51253_52000_+	type-F conjugative transfer system pilin acetylase TraX	NA	A0A077JBM8	Xanthomonas_phage	30.5	2.7e-08
WP_001567328.1|52054_52615_+	fertility inhibition protein FinO	NA	NA	NA	NA	NA
WP_039023209.1|52745_52955_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029702149.1|53366_53993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029702150.1|54144_54714_+	DUF2726 domain-containing protein	NA	NA	NA	NA	NA
WP_001367749.1|55598_55748_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA	NA
WP_000083833.1|56031_56289_+	replication regulatory protein RepA	NA	NA	NA	NA	NA
WP_001365705.1|56524_56599_+	RepA leader peptide Tap	NA	NA	NA	NA	NA
WP_029702152.1|56591_57449_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA	NA
WP_000616807.1|58387_59041_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000557619.1|59133_59391_+	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA	NA
WP_001398199.1|59323_59725_+	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA	NA
WP_001553819.1|59861_62759_-|transposase	Tn3-like element Tn5403 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	37.8	4.2e-182
WP_000509965.1|62853_63459_+	recombinase family protein	NA	A0A1S5Y2X8	uncultured_archaeal_virus	35.3	9.4e-20
WP_001351729.1|64235_64628_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_000058717.1|64765_65650_+	EamA family transporter	NA	NA	NA	NA	NA
WP_000804064.1|65681_66881_-	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA	NA
WP_000164043.1|66986_67637_+	tetracycline resistance transcriptional repressor TetR(A)	NA	NA	NA	NA	NA
WP_032140899.1|67668_67911_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001067855.1|69532_70237_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000503573.1|70438_71227_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5	NA	NA	NA	NA	NA
WP_000679427.1|71432_71780_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_000259031.1|71773_72613_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000376616.1|72740_72944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000184001.1|73099_74305_+	chromate efflux transporter	NA	NA	NA	NA	NA
WP_000130000.1|74315_74621_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001389365.1|74847_75612_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_001137892.1|76104_76689_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000004159.1|76688_77927_-	MFS transporter	NA	NA	NA	NA	NA
WP_000219391.1|77923_78829_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA	NA
WP_001067855.1|78950_79655_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
>prophage 1
NZ_CP029117	Escherichia coli strain AR435 plasmid unnamed4	120846	11630	104872	120846	integrase,tail,terminase,holin,transposase	Escherichia_phage(60.2%)	104	NA	NA
WP_048218248.1|11630_12467_-	hypothetical protein	NA	A0A1B0V7F2	Salmonella_phage	98.2	8.4e-152
WP_062914759.1|12466_13900_-	hypothetical protein	NA	A0A1B0VAD6	Salmonella_phage	99.8	8.2e-272
WP_000002800.1|13896_14253_-	hypothetical protein	NA	Q71TP1	Escherichia_phage	100.0	1.0e-61
WP_100183872.1|14252_17948_-	transglycosylase SLT domain-containing protein	NA	A0A1B0VDM8	Salmonella_phage	85.9	0.0e+00
WP_000926342.1|18029_18911_-	hypothetical protein	NA	Q71TC9	Escherichia_phage	98.6	2.7e-172
WP_000523980.1|18925_19537_-	hypothetical protein	NA	Q71TN8	Escherichia_phage	99.5	2.9e-109
WP_023153778.1|19547_20114_-	hypothetical protein	NA	Q1MVL0	Enterobacteria_phage	99.5	1.1e-99
WP_032192786.1|20344_21238_+	DUF4760 domain-containing protein	NA	A0A1B5FPC5	Escherichia_phage	30.3	3.4e-26
WP_001057312.1|21289_21766_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000093548.1|21788_22139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001396852.1|22497_22617_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071550046.1|22635_22857_+	host cell division inhibitor Icd-like protein	NA	Q38557	Escherichia_phage	80.3	9.3e-26
WP_033560573.1|22853_23945_+	antirepressor	NA	A0A077SLR9	Escherichia_phage	79.8	7.1e-159
WP_001187875.1|24109_24910_+	protein kilA	NA	Q1MVK4	Enterobacteria_phage	100.0	1.9e-148
WP_062914760.1|24939_25785_+	hypothetical protein	NA	Q1MVK3	Enterobacteria_phage	97.5	1.8e-149
WP_052761440.1|26049_27105_+	ParA family protein	NA	H2BD62	Pseudomonas_phage	70.8	9.0e-143
WP_001561122.1|27174_27462_-	DUF3892 domain-containing protein	NA	NA	NA	NA	NA
WP_053896077.1|27751_28348_-	hypothetical protein	NA	A0A1B0VBK8	Salmonella_phage	100.0	6.3e-109
WP_000509939.1|28519_29029_-	hypothetical protein	NA	Q1MVJ9	Enterobacteria_phage	100.0	1.3e-91
WP_000035251.1|29040_29622_-	hypothetical protein	NA	Q71TM4	Escherichia_phage	99.5	3.8e-103
WP_062914761.1|29657_30473_-	hypothetical protein	NA	A0A1B0V835	Salmonella_phage	98.9	9.8e-113
WP_062914762.1|30482_32072_-	hypothetical protein	NA	Q71TB2	Escherichia_phage	98.5	1.9e-301
WP_023153705.1|32132_33839_-	hypothetical protein	NA	Q1MVJ5	Enterobacteria_phage	94.4	4.7e-311
WP_053903354.1|34065_35067_-	ParB/RepB/Spo0J family partition protein	NA	Q38420	Escherichia_phage	99.7	4.8e-178
WP_001285362.1|35083_36280_-	ParA family protein	NA	A0A077SL49	Escherichia_phage	100.0	1.6e-225
WP_001076427.1|36837_37698_-	RepB family plasmid replication initiator protein	NA	Q71TL8	Escherichia_phage	100.0	4.7e-158
WP_000458377.1|38024_38426_-	hypothetical protein	NA	Q71TL7	Escherichia_phage	54.0	5.5e-32
WP_001281923.1|38496_38856_-	hypothetical protein	NA	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	69.1	4.6e-38
WP_000007769.1|39033_39456_-	hypothetical protein	NA	A0A1B0VCB0	Salmonella_phage	100.0	2.7e-58
WP_048218262.1|39495_40284_-	hypothetical protein	NA	A0A1B0V830	Salmonella_phage	96.9	1.7e-117
WP_001177862.1|40745_41030_+	hypothetical protein	NA	Q71TA2	Escherichia_phage	97.9	2.5e-47
WP_000472529.1|41022_41928_+	recombination-associated protein RdgC	NA	A0A077SK17	Escherichia_phage	99.7	1.6e-159
WP_062914763.1|41924_44189_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A077SL51	Escherichia_phage	66.8	0.0e+00
WP_000751808.1|46163_46991_+	hypothetical protein	NA	A0A077SLJ6	Escherichia_phage	100.0	1.6e-131
WP_001276603.1|47380_48745_+	replicative DNA helicase	NA	O80281	Escherichia_phage	99.8	1.6e-253
WP_062914764.1|48744_49743_+	hypothetical protein	NA	Q71TK3	Escherichia_phage	99.1	8.1e-194
WP_000535208.1|49789_50422_-	hypothetical protein	NA	Q1MVH8	Enterobacteria_phage	100.0	9.0e-90
WP_023153696.1|50414_51431_-	hypothetical protein	NA	A0A077SLQ1	Escherichia_phage	99.7	4.5e-192
WP_000602719.1|51432_52218_-	hypothetical protein	NA	A0A1B0V7N6	Salmonella_phage	99.6	3.6e-144
WP_000896801.1|52204_52933_-	hypothetical protein	NA	A0A077SK19	Escherichia_phage	100.0	9.3e-139
WP_001141908.1|52936_54154_-	hypothetical protein	NA	A0A077SL53	Escherichia_phage	100.0	1.1e-224
WP_000235786.1|54163_54541_-	hypothetical protein	NA	Q38620	Escherichia_phage	100.0	2.2e-67
WP_000840931.1|54687_54933_+	hypothetical protein	NA	Q71T86	Escherichia_phage	100.0	5.7e-40
WP_000943607.1|54935_55514_+	norphogenetic protein	NA	Q71T85	Escherichia_phage	99.5	5.7e-107
WP_000096174.1|55580_55736_+	hypothetical protein	NA	Q71TJ4	Escherichia_phage	100.0	7.0e-20
WP_012817939.1|55677_56340_+	hypothetical protein	NA	Q71T83	Escherichia_phage	100.0	4.5e-124
WP_000484110.1|56237_56864_+	norphogenetic protein	NA	Q71T82	Escherichia_phage	100.0	6.1e-123
WP_023352819.1|56860_57538_+	hypothetical protein	NA	Q71TJ1	Escherichia_phage	99.6	1.1e-133
WP_000684868.1|57534_58236_+	hypothetical protein	NA	Q71TJ0	Escherichia_phage	99.6	2.1e-143
WP_023153718.1|58537_59800_+	hypothetical protein	NA	Q71TI8	Escherichia_phage	99.8	9.2e-235
WP_000021768.1|59872_60379_+	hypothetical protein	NA	A0A1B0VAK0	Salmonella_phage	99.4	1.8e-93
WP_023153717.1|60573_61302_+	hypothetical protein	NA	Q71T76	Escherichia_phage	99.1	1.7e-140
WP_108703253.1|61385_61589_+	hypothetical protein	NA	A0A2R2Z313	Escherichia_phage	94.0	5.2e-31
WP_023352820.1|61581_61821_+	hypothetical protein	NA	S5MQM0	Escherichia_phage	97.5	1.3e-36
WP_023154014.1|61817_62543_+	ead/Ea22-like family protein	NA	A0A0U2QW67	Escherichia_phage	49.8	7.5e-48
WP_000118152.1|62539_62839_+	hypothetical protein	NA	Q716F3	Shigella_phage	100.0	1.5e-58
WP_033550033.1|62840_63398_+	ead/Ea22-like family protein	NA	A0A0N7BYR8	Escherichia_phage	62.8	5.1e-36
WP_000224220.1|63399_63663_+	hypothetical protein	NA	A0A2P0P958	Salmonella_phage	73.6	6.7e-31
WP_053903357.1|63673_64273_+	DUF551 domain-containing protein	NA	A0A1B0V865	Salmonella_phage	92.6	7.5e-78
WP_000516537.1|64355_64589_+	hypothetical protein	NA	A0A1B0V7L5	Salmonella_phage	97.4	1.6e-36
WP_001677496.1|64767_65061_+	hypothetical protein	NA	A0A077SK23	Escherichia_phage	91.8	9.1e-45
WP_023154376.1|65067_65442_+	hypothetical protein	NA	A0A1B0VBU7	Salmonella_phage	97.6	1.1e-66
WP_077780118.1|65423_66356_+	hypothetical protein	NA	A0A1B0VDS6	Salmonella_phage	97.7	2.6e-178
WP_001261544.1|66352_66715_+	hypothetical protein	NA	Q71TI4	Escherichia_phage	100.0	2.2e-56
WP_001377386.1|67376_67628_+	DNA polymerase III subunit theta	NA	Q71T70	Escherichia_phage	94.0	4.6e-37
WP_000506726.1|67751_68141_+	DNA repair protein	NA	Q1MVE7	Enterobacteria_phage	99.2	1.4e-69
WP_001190712.1|68213_68435_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	A0A222YXU1	Escherichia_phage	100.0	6.7e-32
WP_001216045.1|68434_68815_+	type II toxin-antitoxin system death-on-curing family toxin	NA	Q71T66	Escherichia_phage	100.0	1.9e-63
WP_000113019.1|68819_68999_+	hypothetical protein	NA	Q71TH5	Escherichia_phage	98.3	2.7e-23
WP_000648823.1|69026_70070_+	DUF968 domain-containing protein	NA	A0A077SLM1	Escherichia_phage	98.8	2.2e-205
WP_001369802.1|70158_70611_+	hypothetical protein	NA	Q71T63	Escherichia_phage	98.7	1.1e-78
WP_000219605.1|70697_71891_+|terminase	terminase	terminase	Q5QBP3	Enterobacteria_phage	99.0	4.1e-208
WP_000124155.1|71890_73375_+	hypothetical protein	NA	Q5QBP2	Enterobacteria_phage	100.0	2.5e-292
WP_000611656.1|73399_74251_-	hypothetical protein	NA	A0A077SLM8	Escherichia_phage	99.6	6.1e-158
WP_000874154.1|74361_74571_-	hypothetical protein	NA	Q5XLQ8	Enterobacteria_phage	100.0	4.8e-32
WP_000542336.1|75174_75396_+	hypothetical protein	NA	Q5QBN7	Enterobacteria_phage	100.0	4.5e-36
WP_000067534.1|75403_76435_+|integrase	site-specific integrase	integrase	Q71TG5	Escherichia_phage	99.7	2.2e-194
WP_062914755.1|76485_76797_+	hypothetical protein	NA	A0A077SK03	Escherichia_phage	99.0	2.3e-46
WP_023156637.1|77042_77603_+	Ref family protein	NA	Q5QBN4	Enterobacteria_phage	95.7	2.3e-97
WP_023156639.1|77791_78433_+	hypothetical protein	NA	A0A077SK30	Escherichia_phage	98.1	1.6e-113
WP_023156640.1|78489_79797_+	SIR2 family protein	NA	NA	NA	NA	NA
WP_000747846.1|79843_80092_-	hypothetical protein	NA	Q71TG0	Escherichia_phage	100.0	1.8e-41
WP_000224043.1|80088_80529_-	hypothetical protein	NA	A0A077SLF0	Escherichia_phage	100.0	1.7e-79
WP_062914756.1|80562_87330_-	N-6 DNA methylase	NA	Q1MVN7	Enterobacteria_phage	98.7	0.0e+00
WP_023153801.1|87405_89115_+	hypothetical protein	NA	Q1MVN6	Enterobacteria_phage	99.6	0.0e+00
WP_023352830.1|89107_90127_+	hypothetical protein	NA	Q71TR6	Escherichia_phage	89.7	7.6e-163
WP_001345478.1|90418_90976_-	lysozyme	NA	Q71TF3	Escherichia_phage	100.0	4.2e-107
WP_023352831.1|91144_91633_+	single-stranded DNA-binding protein	NA	A0A1B0VAF5	Salmonella_phage	87.7	1.1e-74
WP_032163662.1|91638_91821_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023351931.1|91835_92624_+	hypothetical protein	NA	A0A077SK34	Escherichia_phage	99.2	8.0e-144
WP_023352832.1|92616_93711_+	hypothetical protein	NA	Q5QBP2	Enterobacteria_phage	36.7	6.7e-40
WP_001165936.1|93742_94051_-	hypothetical protein	NA	O21974	Escherichia_phage	97.1	5.4e-48
WP_062914757.1|94040_97028_-	hypothetical protein	NA	A0A1B0VFX4	Salmonella_phage	99.5	0.0e+00
WP_048218295.1|97127_98336_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SL42	Escherichia_phage	99.8	4.1e-224
WP_000175491.1|98375_98741_-	hypothetical protein	NA	A0A1B0V846	Salmonella_phage	98.3	9.3e-47
WP_048218296.1|98737_100657_-	defense against restriction protein A	NA	A0A1B0V7H1	Salmonella_phage	98.4	0.0e+00
WP_001345482.1|100658_101261_-	hypothetical protein	NA	Q1MVM6	Enterobacteria_phage	100.0	5.4e-100
WP_000580776.1|101247_101691_-	hypothetical protein	NA	A0A077SK09	Escherichia_phage	100.0	1.3e-82
WP_000887652.1|101687_102017_-|holin	holin	holin	Q37876	Escherichia_phage	100.0	1.3e-52
WP_048218298.1|102091_102355_-	hypothetical protein	NA	Q71TD9	Escherichia_phage	62.4	4.0e-23
WP_023351542.1|102790_103363_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	85.6	1.5e-83
WP_048218313.1|103393_103882_+|tail	tail fiber protein	tail	M1TAS6	Escherichia_phage	72.2	1.7e-59
WP_048218300.1|103881_104484_+|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	87.5	2.3e-95
WP_001032314.1|104455_104872_-|tail	tail fiber assembly protein	tail	B6SCW7	Bacteriophage	47.6	4.1e-22
>prophage 1
NZ_CP029118	Escherichia coli strain AR435 plasmid unnamed5, complete sequence	187909	45184	136105	187909	transposase,integrase	Escherichia_phage(18.52%)	84	80615:80674	134014:134027
WP_108703255.1|45184_46726_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	46.8	4.6e-127
WP_000194037.1|46740_47496_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	51.5	3.4e-59
WP_000393783.1|47766_48288_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000849069.1|48292_48901_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000946104.1|49168_50284_+	phosphoadenosine phosphosulfate reductase family protein	NA	H7BVI4	unidentified_phage	28.9	8.3e-46
WP_004201092.1|50301_50736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032427622.1|50821_50986_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001348532.1|51772_52873_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000127321.1|52857_53145_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001447712.1|53149_53689_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000077457.1|54187_55171_+	ParM/StbA family protein	NA	A7KUY1	Bacillus_phage	24.4	2.1e-08
WP_000919078.1|55187_55481_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000651490.1|55482_55902_+	H-NS histone family protein	NA	NA	NA	NA	NA
WP_001020646.1|55961_56513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000891157.1|56509_57118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000790610.1|57128_57662_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_000356489.1|57661_57934_-	nucleotide excision repair protein	NA	A0A2H4J3B6	uncultured_Caudovirales_phage	41.0	1.3e-08
WP_000683483.1|58649_59012_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000534551.1|59049_62664_-	conjugal transfer protein TraG	NA	NA	NA	NA	NA
WP_000256129.1|62676_64110_-	conjugal transfer protein TraH	NA	NA	NA	NA	NA
WP_001326396.1|64111_65152_-	conjugal transfer protein TraF	NA	NA	NA	NA	NA
WP_000811656.1|65262_66774_-	ATP-dependent helicase	NA	A0A2D1GN12	Pseudoalteromonas_phage	30.7	3.6e-44
WP_000101568.1|67060_68101_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_001097010.1|68253_69129_-	DNA replication terminus site-binding protein	NA	NA	NA	NA	NA
WP_072141188.1|69277_69400_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000139717.1|69445_69937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000997323.1|69933_70803_-	3'-5' exonuclease	NA	A0A1S6L012	Salmonella_phage	35.1	3.5e-23
WP_000543934.1|70807_71818_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0K0N6I5	Gordonia_phage	31.9	3.1e-07
WP_000949433.1|71820_72357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000575657.1|72655_72937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000278322.1|73206_73809_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000791469.1|73824_74277_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001326394.1|74447_74888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162185053.1|74859_79005_-	RHS repeat protein	NA	A0A2H4JHK7	uncultured_Caudovirales_phage	47.6	1.1e-18
WP_032410269.1|79067_79271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000988731.1|79245_79971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000868820.1|80084_80459_-	hypothetical protein	NA	NA	NA	NA	NA
80615:80674	attL	CGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG	NA	NA	NA	NA
WP_000427623.1|81718_82723_-|transposase	IS110-like element IS4321 family transposase	transposase	NA	NA	NA	NA
80615:80674	attL	CGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG	NA	NA	NA	NA
WP_000429836.1|82801_83236_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_001294663.1|83307_83658_+	mercuric transport protein MerT	NA	NA	NA	NA	NA
WP_000732292.1|83671_83947_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA	NA
WP_001340589.1|83982_84405_+	organomercurial transporter MerC	NA	NA	NA	NA	NA
WP_000105636.1|84456_86151_+	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	8.8e-39
WP_001277456.1|86168_86531_+	mercury resistance co-regulator MerD	NA	NA	NA	NA	NA
WP_000993386.1|86527_86764_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA	NA
WP_108703256.1|87506_88811_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_000027057.1|89378_90239_-	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
WP_000722315.1|90938_91763_-	oxacillin-hydrolyzing class D beta-lactamase OXA-9	NA	NA	NA	NA	NA
WP_001206315.1|91822_92611_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA	NA
WP_063840280.1|92680_93235_-	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase	NA	NA	NA	NA	NA
WP_001217881.1|93468_94026_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	98.4	2.0e-93
WP_011977771.1|94189_97195_+|transposase	Tn3-like element Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	99.5	0.0e+00
WP_002903955.1|99197_100100_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.7	2.6e-159
WP_002210513.1|100361_101123_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
WP_002904004.1|101143_102004_-	class A extended-spectrum beta-lactamase SHV-12	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
WP_001067855.1|102140_102845_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_032723058.1|102874_103150_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015056392.1|103360_104890_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_004201176.1|105078_106719_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	62.1	8.2e-175
WP_004201172.1|106774_107065_-	co-chaperone GroES	NA	A0A221S322	uncultured_virus	47.8	2.1e-17
WP_004201171.1|107258_107588_+	divalent-cation tolerance protein CutA	NA	NA	NA	NA	NA
WP_004201169.1|107592_108624_+	twin-arginine translocation (TAT) pathway signal sequence domain protein	NA	NA	NA	NA	NA
WP_004201168.1|108634_109273_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_004201167.1|109277_109643_-	bleomycin binding protein Ble-MBL	NA	NA	NA	NA	NA
WP_004201164.1|109646_110459_-	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA	NA
WP_000427623.1|111693_112698_-|transposase	IS110-like element IS4321 family transposase	transposase	NA	NA	NA	NA
110590:111693	attR	CGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCCCCGGACGAGTGGGAATCCATGGTAGGGATTTTTACCGAAATGGAAGAACACTATTAGGGGGCACCTCAGAAAACGGAATCTATGGTCACTCCCGTTTTTGCAACACCGATTTTGACGACAAGTTGGCTTGCTTGAATCTATCCGGCGTCTGAATGGGATTTTATTCCCGCGCCTTGATGAGTTCCGCGCCTGATGAACCTCCAGAAAATATACGGCTTCAATGAGCCTTTCCGTTTTACAGGTTCCTCAACAGGCCGGTGGGCCGTTAGTATCATCAATATCAGTATTCGCAAAACCAGATCAGTAATTCTTTAAACCGGTGTATTTCTGCCG	NA	NA	NA	NA
WP_000429836.1|112776_113211_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
110590:111693	attR	CGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCCCCGGACGAGTGGGAATCCATGGTAGGGATTTTTACCGAAATGGAAGAACACTATTAGGGGGCACCTCAGAAAACGGAATCTATGGTCACTCCCGTTTTTGCAACACCGATTTTGACGACAAGTTGGCTTGCTTGAATCTATCCGGCGTCTGAATGGGATTTTATTCCCGCGCCTTGATGAGTTCCGCGCCTGATGAACCTCCAGAAAATATACGGCTTCAATGAGCCTTTCCGTTTTACAGGTTCCTCAACAGGCCGGTGGGCCGTTAGTATCATCAATATCAGTATTCGCAAAACCAGATCAGTAATTCTTTAAACCGGTGTATTTCTGCCG	NA	NA	NA	NA
WP_001067858.1|115665_116370_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
WP_004896925.1|117254_117797_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000155092.1|118155_119040_-	Mph(E) family macrolide 2'-phosphotransferase	NA	NA	NA	NA	NA
WP_000052512.1|119095_120571_-	ABC-F type ribosomal protection protein Msr(E)	NA	A0A1B0RXA0	Streptococcus_phage	59.0	2.3e-160
WP_002001451.1|120969_122154_-|transposase	IS4-like element ISEc29 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	35.4	4.5e-50
WP_002026779.1|122202_122388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077252464.1|122607_122889_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000359986.1|122869_123643_-	ArmA family 16S rRNA (guanine(1405)-N(7))-methyltransferase	NA	NA	NA	NA	NA
WP_000259031.1|126985_127825_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000679427.1|127818_128166_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_001206356.1|128329_129121_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
WP_001336345.1|129126_129417_-	DUF1010 domain-containing protein	NA	NA	NA	NA	NA
WP_001083725.1|129528_130026_-	trimethoprim-resistant dihydrofolate reductase DfrA12	NA	A0A0A0PL85	Bacillus_phage	40.9	7.5e-23
WP_000845039.1|130170_131184_+|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
WP_001162012.1|131489_132047_+	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	81.3	5.8e-48
WP_001138073.1|132049_135022_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	73.1	0.0e+00
WP_000427619.1|135100_136105_+|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
