The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP029086	Staphylococcus aureus strain AR462 chromosome, complete genome	2749935	230363	239406	2749935	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|230363_230882_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595011.1|230903_233177_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000749795.1|233379_235659_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|235933_236194_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|236212_237352_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|237374_238400_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005768.1|238401_239406_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 2
NZ_CP029086	Staphylococcus aureus strain AR462 chromosome, complete genome	2749935	362838	424171	2749935	protease,tRNA	Staphylococcus_phage(95.56%)	57	NA	NA
WP_108720526.1|362838_369399_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.2	2.3e-305
WP_000836461.1|369724_370036_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_001108730.1|370057_372472_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_001025067.1|372762_373944_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_000526539.1|374053_375007_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|375003_375567_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|375689_376091_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|376662_377490_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|377492_377612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196362.1|377723_378725_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
WP_001008549.1|378846_379311_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001159037.1|379323_380505_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_000493887.1|380515_381148_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_000384185.1|381154_382186_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	4.0e-196
WP_001261668.1|382678_384181_-	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000221177.1|384703_385018_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_000989121.1|385017_386310_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_001032833.1|386396_387251_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|387526_387751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671057.1|387949_388420_+	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_001153742.1|388532_388976_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030469.1|388962_389406_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001168903.1|389701_390337_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_031862850.1|390776_391490_-	transaldolase	NA	M1PR54	Cyanophage	35.3	1.9e-19
WP_000091442.1|391749_392052_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|392307_392673_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623470.1|392669_393023_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_000453306.1|395019_395853_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000366163.1|396064_396973_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933820.1|397094_398291_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000109906.1|398662_400255_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_001822900.1|400632_401379_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_000672013.1|401383_401857_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_000718107.1|401922_402180_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778528.1|402176_403178_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
WP_000348364.1|403182_404661_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_012840523.1|404819_405275_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_001795210.1|405577_406228_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	2.9e-51
WP_000070642.1|406308_407304_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
WP_000669024.1|407378_408005_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
WP_000627540.1|408045_408387_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000414216.1|408487_409060_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_001801861.1|410414_410510_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001792025.1|410632_410734_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072627.1|411809_413039_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	4.0e-134
WP_078091603.1|413031_414771_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.8	6.9e-289
WP_001791797.1|414751_414886_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031906773.1|414948_415668_-|protease	serine protease SplD	protease	A0A2H4PQP1	Staphylococcus_phage	96.7	3.3e-128
WP_001038872.1|415788_416508_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
WP_001039454.1|416565_417288_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_001039427.1|417412_418120_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
WP_001092780.1|419083_419665_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.8	9.6e-54
WP_000469591.1|420137_420356_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	80.6	2.0e-25
WP_000550252.1|420611_421085_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000543854.1|421089_421881_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000782463.1|422250_423234_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_000473596.1|423235_424171_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
>prophage 3
NZ_CP029086	Staphylococcus aureus strain AR462 chromosome, complete genome	2749935	517977	611201	2749935	head,tail,terminase,protease,tRNA,portal,integrase,capsid,holin	Staphylococcus_phage(85.33%)	111	514414:514438	613409:613433
514414:514438	attL	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
WP_000170162.1|517977_518280_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957020.1|518646_520185_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831700.1|520273_521473_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774556.1|521485_523489_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
WP_000992924.1|523492_525685_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272056.1|525681_526374_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|526545_526848_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|526956_528252_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827746.1|529111_530278_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434933.1|530308_530635_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669862.1|530926_531100_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|531080_531683_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040866.1|531953_532775_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000284436.1|532767_534237_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
WP_000897635.1|534420_535497_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177828.1|535516_536311_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|536382_536490_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323161.1|536500_538063_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275727.1|538267_539365_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	3.3e-47
WP_000149686.1|539733_540294_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|540346_541276_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001792184.1|541468_541642_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021210.1|541693_543073_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181315.1|543192_544221_-	lactonase family protein	NA	NA	NA	NA	NA
WP_000205106.1|544490_544892_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|545464_545638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188043.1|546088_547129_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713072.1|547185_548028_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|548024_548582_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|548641_549166_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|549286_549850_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_108720530.1|549915_550656_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763043.1|550655_551528_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
WP_108720531.1|551524_552205_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991306.1|552205_553102_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000691584.1|553098_553479_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|553736_553913_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|554155_554254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068542.1|554453_555740_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000671712.1|556018_556309_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001557458.1|556323_557754_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000669791.1|558711_558891_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	98.3	1.4e-24
WP_001791826.1|559201_559462_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|559514_559865_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001110820.1|560374_560671_-	peptidoglycan hydrolase	NA	A0A1P8L6B4	Staphylococcus_phage	95.9	1.6e-49
WP_000920038.1|561360_561852_-	staphylokinase	NA	A0A1W6JQ12	Staphylococcus_phage	99.4	4.7e-86
WP_000861038.1|562042_562798_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|562809_563064_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_031762631.1|563115_563223_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|563275_563452_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000034846.1|563654_564437_-	staphylococcal enterotoxin type P	NA	A0A075M4C7	Staphylococcus_phage	99.6	1.6e-149
WP_000340977.1|564848_565223_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001040255.1|565278_565566_-	hypothetical protein	NA	A0A075LZJ6	Staphylococcus_phage	100.0	5.8e-44
WP_000654329.1|565612_565765_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	98.0	1.2e-19
WP_108720532.1|565754_569540_-	hypothetical protein	NA	A0A1X9H0H3	Staphylococcus_phage	98.2	0.0e+00
WP_000567408.1|569555_571040_-|tail	phage tail protein	tail	A0A2I6PDJ0	Staphylococcus_phage	100.0	1.2e-297
WP_001796452.1|571036_575566_-|tail	phage tail tape measure protein	tail	A0A2I6PDK2	Staphylococcus_phage	99.8	0.0e+00
WP_001096355.1|575810_576161_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_071621395.1|576210_576435_-	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_000268734.1|576476_577121_-|tail	phage tail protein	tail	A0EWZ9	Staphylococcus_phage	99.1	1.2e-118
WP_000565498.1|577121_577529_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114226.1|577525_577930_-	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000755150.1|577926_578289_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150938.1|578272_578557_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	98.9	4.0e-45
WP_000238236.1|578546_578831_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000154559.1|578850_579996_-|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000642727.1|580019_580757_-|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	99.6	4.0e-129
WP_000025274.1|580740_581928_-|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000625088.1|581943_583605_-|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000402904.1|583601_583946_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988336.1|584075_584375_-	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
WP_000590122.1|584606_585023_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000265043.1|585050_585251_-	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_000595264.1|585250_585400_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	98.0	8.2e-18
WP_000592207.1|585396_585783_-	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
WP_000195803.1|585779_585986_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_001282074.1|585982_586228_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_001066448.1|586264_586801_-	hypothetical protein	NA	A0A1W6JQ21	Staphylococcus_phage	100.0	9.4e-96
WP_001065097.1|586950_587205_-	DUF1024 family protein	NA	A0A0H3U469	Staphylococcus_phage	100.0	5.0e-39
WP_000131370.1|587219_587462_-	hypothetical protein	NA	Q4ZDP7	Staphylococcus_virus	95.0	2.1e-39
WP_000101288.1|587465_587834_-	hypothetical protein	NA	A0A0H3U2T3	Staphylococcus_phage	100.0	2.0e-49
WP_078065130.1|587846_588155_-	RusA family crossover junction endodeoxyribonuclease	NA	A0EWX6	Staphylococcus_phage	100.0	1.6e-52
WP_000338530.1|588257_588476_-	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	100.0	1.0e-37
WP_000148321.1|588482_589376_-	DnaD domain-containing protein	NA	A0A2I6PDG7	Staphylococcus_phage	99.3	5.5e-141
WP_000934760.1|589405_589876_-	single-stranded DNA-binding protein	NA	A0EWX3	Staphylococcus_phage	99.4	7.4e-81
WP_071665632.1|589876_590494_-	MBL fold metallo-hydrolase	NA	A0A0H3U2T4	Staphylococcus_phage	100.0	4.1e-87
WP_000138475.1|590574_591495_-	recombinase	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
WP_000700555.1|591496_593440_-	AAA family ATPase	NA	S4V9K6	Staphylococcus_phage	100.0	0.0e+00
WP_001205732.1|593448_593712_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000291510.1|593720_593981_-	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_000165371.1|593985_594288_-	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_108720533.1|594380_594854_-	DUF1270 family protein	NA	Q4ZDR7	Staphylococcus_virus	99.0	1.1e-55
WP_000993182.1|594883_595102_-	hypothetical protein	NA	Q4ZBN1	Staphylococcus_phage	97.2	2.1e-30
WP_000388066.1|595132_595327_-	hypothetical protein	NA	A0A1X9H0A2	Staphylococcus_phage	100.0	1.5e-19
WP_000128907.1|596145_596475_+	hypothetical protein	NA	M9NS98	Staphylococcus_phage	100.0	2.7e-53
WP_001025404.1|596463_596679_-	DUF2829 domain-containing protein	NA	A0A0H3U4C7	Staphylococcus_phage	100.0	4.8e-35
WP_000854072.1|596694_596958_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	100.0	7.2e-41
WP_001801500.1|596954_597128_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001031454.1|597090_597804_+	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
WP_000759682.1|597819_598752_+	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	100.0	5.7e-173
WP_000591749.1|598757_599099_+	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
WP_000705248.1|599302_599485_+	hypothetical protein	NA	M9NSW6	Staphylococcus_phage	100.0	4.1e-27
WP_000825947.1|599584_600049_+	hypothetical protein	NA	A0EWV3	Staphylococcus_phage	100.0	1.1e-28
WP_000857191.1|600107_601145_+|integrase	site-specific integrase	integrase	A0EWV2	Staphylococcus_phage	100.0	9.1e-180
WP_000595392.1|602263_603280_-	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
WP_000791411.1|603301_604357_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000206625.1|604792_606016_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_001045079.1|606459_607767_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000240642.1|608306_609923_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_108720534.1|609998_610283_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000197635.1|610457_611201_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
613409:613433	attR	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
>prophage 4
NZ_CP029086	Staphylococcus aureus strain AR462 chromosome, complete genome	2749935	2070824	2078645	2749935		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|2070824_2071880_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|2071879_2072566_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|2072540_2073014_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093562.1|2073356_2073797_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000604990.1|2074076_2074661_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|2074759_2075473_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|2075476_2075896_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|2075897_2076566_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604514.1|2076916_2077510_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001217796.1|2077493_2078645_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
>prophage 5
NZ_CP029086	Staphylococcus aureus strain AR462 chromosome, complete genome	2749935	2090616	2105201	2749935		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000663030.1|2090616_2091675_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000197262.1|2092013_2092556_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429006.1|2093378_2094296_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_031760357.1|2094386_2094488_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|2094565_2096071_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|2096411_2096912_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068501.1|2096931_2097798_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|2098598_2098997_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855514.1|2098959_2101065_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|2101182_2102154_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|2102334_2102490_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|2102528_2103500_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245577.1|2103486_2104443_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616840.1|2104439_2105201_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
>prophage 6
NZ_CP029086	Staphylococcus aureus strain AR462 chromosome, complete genome	2749935	2351740	2360213	2749935		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861572.1|2351740_2352223_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_031862888.1|2352209_2353334_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|2353337_2354042_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|2354041_2354305_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666806.1|2354306_2354978_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032740.1|2354970_2357160_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000483720.1|2357138_2358623_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_000030811.1|2358615_2359644_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000238669.1|2359646_2360213_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
