The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP029087	Staphylococcus aureus strain AR461 chromosome, complete genome	2909586	757347	765168	2909586		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|757347_758403_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|758402_759089_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|759063_759537_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093562.1|759879_760320_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000604990.1|760599_761184_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|761282_761996_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|761999_762419_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|762420_763089_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604514.1|763439_764033_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001217796.1|764016_765168_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
>prophage 2
NZ_CP029087	Staphylococcus aureus strain AR461 chromosome, complete genome	2909586	777139	791780	2909586		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000663030.1|777139_778198_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000197262.1|778536_779079_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429006.1|779957_780875_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_031760357.1|780965_781067_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|781144_782650_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|782990_783491_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068501.1|783510_784377_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|785177_785576_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855514.1|785538_787644_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|787761_788733_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|788913_789069_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|789107_790079_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245577.1|790065_791022_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616840.1|791018_791780_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
>prophage 3
NZ_CP029087	Staphylococcus aureus strain AR461 chromosome, complete genome	2909586	1036666	1045139	2909586		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861573.1|1036666_1037149_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	8.0e-22
WP_001010413.1|1037135_1038260_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|1038263_1038968_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|1038967_1039231_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666806.1|1039232_1039904_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032740.1|1039896_1042086_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000483720.1|1042064_1043549_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_000030811.1|1043541_1044570_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000238669.1|1044572_1045139_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 4
NZ_CP029087	Staphylococcus aureus strain AR461 chromosome, complete genome	2909586	1096694	1178737	2909586	tail,head,portal,terminase,plate,transposase,tRNA,holin,capsid	Staphylococcus_phage(59.15%)	105	NA	NA
WP_000401377.1|1096694_1097177_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_000843611.1|1097238_1098378_-	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_000872158.1|1098504_1099062_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_000290472.1|1099141_1099315_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_000861313.1|1099431_1100817_-	recombinase family protein	NA	I1W625	Staphylococcus_phage	100.0	2.5e-265
WP_000337827.1|1100925_1101105_+	hypothetical protein	NA	Q4ZBP0	Staphylococcus_phage	100.0	3.7e-25
WP_000392183.1|1101084_1102017_-	hypothetical protein	NA	A0EX19	Staphylococcus_virus	100.0	6.7e-174
WP_000705238.1|1102156_1102324_-	hypothetical protein	NA	Q4ZDJ4	Staphylococcus_virus	100.0	1.7e-24
WP_000358224.1|1102393_1103113_-	helix-turn-helix transcriptional regulator	NA	A0A2H4PQQ2	Staphylococcus_phage	100.0	1.3e-132
WP_001198673.1|1103254_1103473_+	helix-turn-helix transcriptional regulator	NA	Q8SDX1	Staphylococcus_phage	100.0	2.9e-35
WP_001148566.1|1103488_1104277_+	phage antirepressor KilAC domain-containing protein	NA	A0EWP1	Staphylococcus_virus	100.0	4.2e-145
WP_000390105.1|1104293_1104488_+	hypothetical protein	NA	E9LT75	Staphylococcus_phage	100.0	1.2e-29
WP_000395457.1|1104691_1104922_-	hypothetical protein	NA	R4IG40	Staphylococcus_phage	100.0	2.3e-35
WP_001619936.1|1105101_1105263_+	DUF1270 family protein	NA	Q4ZDA3	Staphylococcus_virus	100.0	5.0e-21
WP_000291090.1|1105354_1105615_+	DUF1108 family protein	NA	Q4ZDA1	Staphylococcus_virus	100.0	1.2e-43
WP_001077280.1|1105624_1105846_+	DUF2483 family protein	NA	A0A0E3TAJ7	Staphylococcus_phage	100.0	2.4e-34
WP_000139737.1|1105838_1106618_+	ATP-binding protein	NA	Q9G028	Staphylococcus_virus	100.0	2.5e-142
WP_011447037.1|1106701_1107202_+	single-strand DNA-binding protein	NA	A7TWM8	Staphylococcus_phage	100.0	7.2e-90
WP_001619937.1|1107214_1107880_+	hypothetical protein	NA	Q8SDW3	Staphylococcus_phage	100.0	1.1e-125
WP_000240901.1|1107879_1108659_+	AP2 domain-containing protein	NA	A0A2H4J5K3	uncultured_Caudovirales_phage	46.1	7.3e-49
WP_031900111.1|1108630_1109434_+	replication protein	NA	A0A2H4JCF5	uncultured_Caudovirales_phage	99.6	2.5e-121
WP_108711046.1|1109443_1110217_+	ATP-binding protein	NA	A0A2H4PQI3	Staphylococcus_phage	98.1	7.3e-142
WP_000256592.1|1110210_1110369_+	hypothetical protein	NA	A1KX06	Staphylococcus_virus	98.1	9.9e-22
WP_001123673.1|1110381_1110603_+	DUF3269 family protein	NA	A7TWN4	Staphylococcus_phage	100.0	1.3e-35
WP_000401956.1|1110612_1111020_+	RusA family crossover junction endodeoxyribonuclease	NA	A9CR74	Staphylococcus_phage	97.8	3.2e-72
WP_001187255.1|1111019_1111205_+	DUF3113 family protein	NA	Q4ZA46	Staphylococcus_virus	95.1	1.3e-25
WP_001140287.1|1111205_1111577_+	hypothetical protein	NA	Q4ZAY2	Staphylococcus_virus	98.4	8.5e-56
WP_001126828.1|1111577_1111826_+	hypothetical protein	NA	A4ZF93	Staphylococcus_virus	100.0	9.4e-43
WP_000695748.1|1111840_1112242_+	hypothetical protein	NA	A0EWR3	Staphylococcus_virus	100.0	2.0e-71
WP_000982697.1|1112238_1112655_+	hypothetical protein	NA	A0A0D4DC71	Staphylococcus_phage	60.3	1.0e-17
WP_001105596.1|1112651_1113017_+	hypothetical protein	NA	A0A0F6N3K4	Staphylococcus_phage	96.3	2.4e-50
WP_001065124.1|1113009_1113258_+	DUF1024 family protein	NA	A0A0E3T8I2	Staphylococcus_phage	93.9	6.5e-36
WP_000185665.1|1113250_1113760_+	hypothetical protein	NA	M9NS45	Staphylococcus_phage	98.2	1.6e-89
WP_000195838.1|1113796_1114084_+	DUF1381 domain-containing protein	NA	Q4ZBK2	Staphylococcus_phage	100.0	4.3e-47
WP_000592235.1|1114076_1114463_+	hypothetical protein	NA	Q4ZBK1	Staphylococcus_phage	98.4	3.0e-64
WP_000595236.1|1114459_1114633_+	transcriptional activator RinB	NA	Q4ZDF9	Staphylococcus_virus	98.2	6.4e-22
WP_000990005.1|1114633_1114780_+	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	100.0	2.2e-15
WP_000162696.1|1114803_1115226_+	RinA family phage transcriptional activator	NA	S4V7K2	Staphylococcus_phage	100.0	1.6e-74
WP_001003271.1|1115412_1115853_+|terminase	terminase small subunit	terminase	I1W650	Staphylococcus_phage	100.0	4.8e-74
WP_000169945.1|1115839_1117117_+|terminase	PBSX family phage terminase large subunit	terminase	S4V685	Staphylococcus_phage	100.0	1.3e-249
WP_001652961.1|1117127_1118663_+|portal	phage portal protein	portal	Q4ZDN2	Staphylococcus_virus	100.0	4.5e-292
WP_108711047.1|1118669_1119665_+|capsid	minor capsid protein	capsid	E0Y3K7	Staphylococcus_virus	99.7	2.2e-183
WP_000072205.1|1119737_1119908_+	hypothetical protein	NA	Q4ZDN0	Staphylococcus_virus	100.0	4.3e-23
WP_000392141.1|1120016_1120637_+	DUF4355 domain-containing protein	NA	Q4ZDM9	Staphylococcus_virus	100.0	1.1e-63
WP_000438502.1|1120650_1121625_+|capsid	phage major capsid protein	capsid	Q8SDU5	Staphylococcus_phage	100.0	1.3e-183
WP_001114085.1|1121646_1121934_+	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	100.0	4.7e-46
WP_000208960.1|1121942_1122275_+|head,tail	phage head-tail connector protein	head,tail	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
WP_001268312.1|1122271_1122574_+	hypothetical protein	NA	A4ZFB6	Staphylococcus_virus	100.0	1.1e-50
WP_001017815.1|1122573_1122921_+	HK97 gp10 family phage protein	NA	A0A0F6N3F5	Staphylococcus_phage	100.0	4.1e-60
WP_015977972.1|1122932_1123316_+	hypothetical protein	NA	Q4ZDM4	Staphylococcus_virus	100.0	2.6e-68
WP_015977970.1|1123334_1123916_+|tail	phage major tail protein, TP901-1 family	tail	Q4ZDM3	Staphylococcus_virus	100.0	1.8e-105
WP_001100161.1|1123977_1124343_+	hypothetical protein	NA	A0A0F6N4J9	Staphylococcus_phage	100.0	3.6e-59
WP_000105584.1|1124372_1124717_+	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
WP_000141470.1|1124733_1128198_+	hypothetical protein	NA	Q4ZDL9	Staphylococcus_virus	100.0	2.3e-267
WP_001607563.1|1128210_1129158_+|tail	phage tail family protein	tail	A0A0F6N3L4	Staphylococcus_phage	99.7	6.1e-183
WP_000156406.1|1129166_1131068_+	peptidase	NA	Q8SDT5	Staphylococcus_phage	100.0	0.0e+00
WP_108711048.1|1131082_1132993_+	hypothetical protein	NA	Q4ZDL3	Staphylococcus_virus	99.5	0.0e+00
WP_031769412.1|1132992_1134816_+|plate	phage baseplate upper protein	plate	A0A0E3XBS0	Staphylococcus_phage	96.4	3.4e-307
WP_000705896.1|1134815_1135193_+	DUF2977 domain-containing protein	NA	A0A0F6N3G4	Staphylococcus_phage	100.0	1.5e-60
WP_000782200.1|1135196_1135370_+	XkdX family protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
WP_000466778.1|1135409_1135709_+	DUF2951 domain-containing protein	NA	A0A0H4ITZ0	Staphylococcus_phage	100.0	7.6e-47
WP_000524022.1|1135845_1137744_+	CHAP domain-containing protein	NA	A0EX80	Staphylococcus_virus	99.7	0.0e+00
WP_000276662.1|1137756_1138995_+|plate	BppU family phage baseplate upper protein	plate	A0A0F6N3G7	Staphylococcus_phage	100.0	1.6e-210
WP_000398868.1|1139000_1139396_+	hypothetical protein	NA	A1KXB6	Staphylococcus_virus	100.0	1.6e-68
WP_000351119.1|1139451_1139727_+|holin	phage holin	holin	A0A0F6N3M0	Staphylococcus_phage	100.0	8.6e-45
WP_001141517.1|1139713_1141126_+	CHAP domain-containing protein	NA	A0A0F6N3N1	Staphylococcus_phage	100.0	5.8e-286
WP_001035620.1|1141185_1141743_-	DUF4888 domain-containing protein	NA	A0A0F6N4L1	Staphylococcus_phage	100.0	7.4e-96
WP_001788502.1|1142117_1142270_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	3.1e-20
WP_000139423.1|1142340_1142451_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_000382163.1|1142437_1142638_+	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
WP_001041583.1|1143047_1144985_-	heme uptake protein IsdB	NA	NA	NA	NA	NA
WP_000160859.1|1145187_1146240_-	LPXTG-anchored heme-scavenging protein IsdA	NA	NA	NA	NA	NA
WP_000789821.1|1146448_1147132_+	heme uptake protein IsdC	NA	NA	NA	NA	NA
WP_001246685.1|1147131_1148208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001220199.1|1148204_1149083_+	heme ABC transporter substrate-binding protein IsdE	NA	NA	NA	NA	NA
WP_001548422.1|1149092_1150061_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_001242427.1|1150122_1150857_+	class B sortase	NA	NA	NA	NA	NA
WP_000670953.1|1150875_1151199_+	staphylobilin-forming heme oxygenase IsdG	NA	NA	NA	NA	NA
WP_001788617.1|1151235_1151343_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000435374.1|1151582_1152323_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_000003566.1|1152702_1153761_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
WP_000908969.1|1153760_1156163_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_001284282.1|1156594_1157533_-	ribonuclease HIII	NA	NA	NA	NA	NA
WP_000046704.1|1157902_1158169_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_000234068.1|1158169_1158691_+	CvpA family protein	NA	NA	NA	NA	NA
WP_000161938.1|1158763_1160476_+	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	6.8e-15
WP_108711049.1|1160485_1162834_+	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.4	1.9e-15
WP_001018928.1|1163006_1163321_+	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
WP_001788625.1|1163383_1163479_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000390524.1|1163644_1165426_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_000079317.1|1165749_1166364_+	succinate dehydrogenase cytochrome B558	NA	NA	NA	NA	NA
WP_000818278.1|1166415_1168182_+	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
WP_000139712.1|1168181_1168997_+	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_001039659.1|1169232_1170033_+	glutamate racemase	NA	NA	NA	NA	NA
WP_000659319.1|1170044_1170632_+	XTP/dITP diphosphatase	NA	NA	NA	NA	NA
WP_000049484.1|1170624_1171128_+	metallophosphoesterase	NA	NA	NA	NA	NA
WP_001791787.1|1171255_1171423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000739210.1|1171616_1171946_+	complement convertase inhibitor Ecb	NA	NA	NA	NA	NA
WP_000739564.1|1172314_1172716_-	formyl peptide receptor-like 1 inhibitory protein	NA	NA	NA	NA	NA
WP_000584398.1|1173385_1173892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000791581.1|1174151_1174649_+	complement convertase inhibitor Efb	NA	NA	NA	NA	NA
WP_000669537.1|1174798_1175149_+	complement inhibitor SCIN-B	NA	NA	NA	NA	NA
WP_001032817.1|1175858_1176044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000231632.1|1176665_1176899_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001557163.1|1177417_1178737_+|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP029087	Staphylococcus aureus strain AR461 chromosome, complete genome	2909586	1529866	1661831	2909586	integrase,tail,head,portal,terminase,plate,tRNA,holin,capsid,protease	Staphylococcus_phage(82.96%)	163	1611118:1611177	1656142:1656253
WP_000858779.1|1529866_1531159_-|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	31.3	8.7e-55
WP_001558006.1|1531480_1534174_-	exonuclease DNA polymerase III epsilon subunit	NA	A0A1X9I5C8	Streptococcus_phage	34.4	6.2e-47
WP_000049921.1|1534197_1535169_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000361540.1|1535155_1536358_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	4.2e-35
WP_108711055.1|1536362_1537505_-	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000839926.1|1537748_1538066_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_001827022.1|1538401_1539082_-	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000154683.1|1539153_1539741_-	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_000005212.1|1539730_1540306_-	IDEAL domain-containing protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
WP_011443634.1|1540319_1541423_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000253231.1|1541570_1542869_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000776312.1|1542878_1543943_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_001269921.1|1543968_1545135_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	31.8	5.8e-34
WP_000789522.1|1545520_1545721_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000442480.1|1545929_1546379_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_001817755.1|1546470_1547415_-	heptaprenyl diphosphate synthase subunit II	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_086036149.1|1547431_1548157_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_000450555.1|1548159_1548732_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_001043863.1|1549162_1549435_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000161745.1|1549605_1550604_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000165530.1|1550620_1551931_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000133961.1|1552152_1553328_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_001792202.1|1553584_1553776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001795818.1|1553856_1554009_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000644391.1|1554039_1554699_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_000681757.1|1554775_1555744_+	asparaginase	NA	NA	NA	NA	NA
WP_001174258.1|1555858_1556845_-	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_001792205.1|1557005_1557122_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000069291.1|1557246_1558707_-	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_108711056.1|1558859_1560239_-	ATP-dependent DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	33.6	1.4e-55
WP_001163801.1|1560228_1561182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001151997.1|1561289_1561538_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001186912.1|1561643_1562189_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_000913227.1|1562590_1563547_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001557351.1|1563687_1563942_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000476354.1|1564017_1564914_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000476865.1|1564971_1565877_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000209712.1|1565966_1566182_-	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.0e-25
WP_108711057.1|1566903_1568358_-	CHAP domain-containing protein	NA	A0A2I6PF47	Staphylococcus_phage	99.4	2.8e-288
WP_000339141.1|1568368_1568671_-|holin	phage holin	holin	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
WP_000466784.1|1568806_1569106_-	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000916020.1|1569151_1569316_-	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_001166599.1|1569308_1569698_-	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000067130.1|1569697_1571164_-|plate	BppU family phage baseplate upper protein	plate	A0A2I6PDE3	Staphylococcus_phage	99.6	3.4e-273
WP_000429558.1|1571163_1573074_-	minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
WP_000179858.1|1573089_1573380_-	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
WP_000384474.1|1573379_1574963_-	peptidase	NA	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
WP_001190533.1|1574971_1575796_-|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_001003416.1|1575795_1581972_-|tail	phage tail tape measure protein	tail	A0A2I6PDS2	Staphylococcus_phage	99.3	0.0e+00
WP_000438833.1|1581985_1582144_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_000589165.1|1582185_1582536_-	hypothetical protein	NA	A0A2I6PDE6	Staphylococcus_phage	100.0	1.1e-55
WP_000169128.1|1582593_1583049_-	Ig domain-containing protein	NA	A0A2I6PF45	Staphylococcus_phage	100.0	1.3e-77
WP_000807536.1|1583140_1583782_-|tail	tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
WP_001023802.1|1583816_1584212_-	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000110020.1|1584212_1584614_-	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_000395501.1|1584610_1584943_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
WP_000050973.1|1584954_1585233_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
WP_001142739.1|1585301_1586465_-|capsid	phage major capsid protein	capsid	A0A2I6PDD7	Staphylococcus_phage	100.0	9.4e-218
WP_000061872.1|1586476_1587250_-|protease	Clp protease ClpP	protease	M1TAZ4	Staphylococcus_phage	100.0	9.2e-137
WP_001100661.1|1587233_1588472_-|portal	phage portal protein	portal	A0A2I6PEA6	Staphylococcus_phage	99.5	2.6e-234
WP_000152858.1|1588476_1590168_-|terminase	terminase large subunit	terminase	A0A2K9VBQ1	Staphylococcus_phage	100.0	0.0e+00
WP_000778935.1|1590157_1590463_-|terminase	P27 family phage terminase small subunit	terminase	U5U414	Staphylococcus_phage	100.0	2.9e-49
WP_000166884.1|1590587_1590908_-	HNH endonuclease	NA	A0A2K9VBV6	Staphylococcus_phage	99.1	1.1e-56
WP_000513704.1|1591064_1591502_-	transcriptional regulator	NA	A0A2K9VBV2	Staphylococcus_phage	100.0	6.1e-77
WP_078065789.1|1591514_1592882_-	DEAD/DEAH box helicase	NA	A0A2I6PDQ0	Staphylococcus_phage	99.1	7.3e-262
WP_000665205.1|1592862_1593153_-	VRR-NUC domain-containing protein	NA	U5U7A3	Staphylococcus_phage	100.0	4.9e-51
WP_015978074.1|1593286_1593391_+	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	2.7e-12
WP_108711086.1|1593493_1594219_-	hypothetical protein	NA	A0A0K1LKN1	Staphylococcus_phage	99.2	1.4e-139
WP_108711058.1|1594302_1595940_-	hypothetical protein	NA	Q4ZCN2	Staphylococcus_virus	98.7	0.0e+00
WP_000265258.1|1595992_1596193_-	DUF1514 family protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
WP_000595272.1|1596260_1596413_-	transcriptional activator RinB	NA	Q9B0E9	Staphylococcus_virus	100.0	2.6e-19
WP_000592202.1|1596409_1596796_-	hypothetical protein	NA	A0A1X9IGZ2	Staphylococcus_phage	100.0	3.0e-64
WP_000195835.1|1596792_1596999_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	97.1	6.4e-29
WP_042748353.1|1597035_1597566_-	dUTP pyrophosphatase	NA	C8CH05	Staphylococcus_phage	99.4	8.7e-94
WP_086039500.1|1597558_1597807_-	DUF1024 family protein	NA	A0A0H4IP74	Staphylococcus_phage	98.8	1.2e-37
WP_108711059.1|1597799_1598108_-	hypothetical protein	NA	Q6R826	Staphylococcus_virus	96.0	5.4e-48
WP_000979209.1|1598104_1598452_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000695747.1|1598448_1598850_-	hypothetical protein	NA	A0EWR3	Staphylococcus_virus	100.0	5.4e-72
WP_000132194.1|1598864_1599107_-	hypothetical protein	NA	A0A2I6PEV3	Staphylococcus_phage	100.0	1.5e-40
WP_000235324.1|1599121_1599322_-	hypothetical protein	NA	A0A2I6PEM3	Staphylococcus_phage	100.0	2.5e-30
WP_031790715.1|1599324_1599582_-	DUF3310 domain-containing protein	NA	A0A2I6PEN5	Staphylococcus_phage	98.8	7.5e-43
WP_000113974.1|1599581_1599983_-	PVL family protein	NA	A0A2I6PEL5	Staphylococcus_phage	100.0	1.2e-68
WP_001164629.1|1599982_1600168_-	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
WP_078064079.1|1600180_1602133_-	DNA polymerase	NA	Q4ZCP5	Staphylococcus_virus	99.5	0.0e+00
WP_000645045.1|1602200_1602758_-	DUF2815 family protein	NA	A0A2K9VBT2	Staphylococcus_phage	100.0	1.8e-97
WP_000762530.1|1602783_1603950_-	DUF2800 domain-containing protein	NA	B5WZM3	Staphylococcus_phage	100.0	8.3e-222
WP_108711060.1|1603946_1604309_-	hypothetical protein	NA	B5WZM2	Staphylococcus_phage	98.3	2.7e-54
WP_000174998.1|1604323_1604647_-	hypothetical protein	NA	A0A2I6PE70	Staphylococcus_phage	100.0	6.5e-52
WP_001285954.1|1604725_1604887_-	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
WP_001124157.1|1604899_1605163_-	helix-turn-helix domain-containing protein	NA	A7TWG0	Staphylococcus_phage	98.9	6.3e-45
WP_001097552.1|1605187_1605403_-	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_001128433.1|1605457_1605823_+	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_001025401.1|1605791_1606037_-	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_000773059.1|1606103_1606484_+	DUF2513 domain-containing protein	NA	Q4ZCQ5	Staphylococcus_virus	100.0	5.8e-68
WP_001148860.1|1606470_1606668_-	hypothetical protein	NA	A7TWF5	Staphylococcus_phage	100.0	4.6e-24
WP_000362644.1|1606737_1606950_+	hypothetical protein	NA	D2JGJ1	Staphylococcus_phage	100.0	7.6e-33
WP_000435357.1|1607154_1607598_-	hypothetical protein	NA	A7TWF2	Staphylococcus_phage	100.0	8.9e-76
WP_000213811.1|1607645_1607858_-	helix-turn-helix transcriptional regulator	NA	A7TWF1	Staphylococcus_phage	100.0	1.6e-30
WP_020807995.1|1608009_1608741_+	helix-turn-helix transcriptional regulator	NA	S4SVC5	Staphylococcus_phage	100.0	6.9e-134
WP_000705240.1|1608810_1608993_+	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_001795334.1|1609028_1609175_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	1.2e-16
WP_000191466.1|1609171_1609786_-	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
WP_000264751.1|1609911_1611117_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
1611118:1611177	attL	CTTAAATCCGCCCTTTTTTTGCCCTTATATTTTTTACAAGCTTTATAAAACGCTTGAGAA	NA	NA	NA	NA
WP_000339141.1|1613425_1613728_-|holin	phage holin	holin	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
WP_000466784.1|1613863_1614163_-	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000916020.1|1614208_1614373_-	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_001166599.1|1614365_1614755_-	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000429558.1|1616219_1618130_-	minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
WP_000179858.1|1618145_1618436_-	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
WP_000589165.1|1627223_1627574_-	hypothetical protein	NA	A0A2I6PDE6	Staphylococcus_phage	100.0	1.1e-55
WP_000169128.1|1627631_1628087_-	Ig domain-containing protein	NA	A0A2I6PF45	Staphylococcus_phage	100.0	1.3e-77
WP_000807536.1|1628178_1628820_-|tail	tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
WP_001023802.1|1628854_1629250_-	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000110020.1|1629250_1629652_-	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_000395501.1|1629648_1629981_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
WP_000050973.1|1629992_1630271_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
WP_000061872.1|1631513_1632287_-|protease	Clp protease ClpP	protease	M1TAZ4	Staphylococcus_phage	100.0	9.2e-137
WP_000778935.1|1635191_1635497_-|terminase	P27 family phage terminase small subunit	terminase	U5U414	Staphylococcus_phage	100.0	2.9e-49
WP_000166884.1|1635619_1635940_-	HNH endonuclease	NA	A0A2K9VBV6	Staphylococcus_phage	99.1	1.1e-56
WP_000665205.1|1637891_1638182_-	VRR-NUC domain-containing protein	NA	U5U7A3	Staphylococcus_phage	100.0	4.9e-51
WP_015978074.1|1638315_1638420_+	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	2.7e-12
WP_108711087.1|1638522_1639149_-	hypothetical protein	NA	A0A0K1LKN1	Staphylococcus_phage	98.6	1.7e-120
WP_108711062.1|1639088_1639535_-	hypothetical protein	NA	A0A2I6PEP4	Staphylococcus_phage	93.7	4.3e-54
WP_108711063.1|1639483_1639708_-	hypothetical protein	NA	M1RZC5	Staphylococcus_phage	100.0	2.7e-28
WP_108711064.1|1639749_1640385_-	hypothetical protein	NA	B5WZN5	Staphylococcus_phage	97.6	4.3e-116
WP_108711065.1|1640378_1640966_-	hypothetical protein	NA	A0A2I6PEP4	Staphylococcus_phage	100.0	6.8e-108
WP_000265258.1|1641018_1641219_-	DUF1514 family protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
WP_001819903.1|1641286_1641400_-	transcriptional regulator	NA	B5WZN3	Staphylococcus_phage	100.0	7.1e-14
WP_000592202.1|1641434_1641821_-	hypothetical protein	NA	A0A1X9IGZ2	Staphylococcus_phage	100.0	3.0e-64
WP_000195835.1|1641817_1642024_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	97.1	6.4e-29
WP_042748353.1|1642060_1642591_-	dUTP pyrophosphatase	NA	C8CH05	Staphylococcus_phage	99.4	8.7e-94
WP_086039500.1|1642583_1642832_-	DUF1024 family protein	NA	A0A0H4IP74	Staphylococcus_phage	98.8	1.2e-37
WP_108711059.1|1642824_1643133_-	hypothetical protein	NA	Q6R826	Staphylococcus_virus	96.0	5.4e-48
WP_000979209.1|1643129_1643477_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000695747.1|1643473_1643875_-	hypothetical protein	NA	A0EWR3	Staphylococcus_virus	100.0	5.4e-72
WP_000132194.1|1643889_1644132_-	hypothetical protein	NA	A0A2I6PEV3	Staphylococcus_phage	100.0	1.5e-40
WP_000235324.1|1644146_1644347_-	hypothetical protein	NA	A0A2I6PEM3	Staphylococcus_phage	100.0	2.5e-30
WP_031790715.1|1644349_1644607_-	DUF3310 domain-containing protein	NA	A0A2I6PEN5	Staphylococcus_phage	98.8	7.5e-43
WP_000113974.1|1644606_1645008_-	PVL family protein	NA	A0A2I6PEL5	Staphylococcus_phage	100.0	1.2e-68
WP_001164629.1|1645007_1645193_-	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
WP_078064079.1|1645205_1647158_-	DNA polymerase	NA	Q4ZCP5	Staphylococcus_virus	99.5	0.0e+00
WP_000645045.1|1647225_1647783_-	DUF2815 family protein	NA	A0A2K9VBT2	Staphylococcus_phage	100.0	1.8e-97
WP_000762530.1|1647808_1648975_-	DUF2800 domain-containing protein	NA	B5WZM3	Staphylococcus_phage	100.0	8.3e-222
WP_108711060.1|1648971_1649334_-	hypothetical protein	NA	B5WZM2	Staphylococcus_phage	98.3	2.7e-54
WP_000174998.1|1649348_1649672_-	hypothetical protein	NA	A0A2I6PE70	Staphylococcus_phage	100.0	6.5e-52
WP_001285954.1|1649750_1649912_-	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
WP_001124157.1|1649924_1650188_-	helix-turn-helix domain-containing protein	NA	A7TWG0	Staphylococcus_phage	98.9	6.3e-45
WP_001097552.1|1650212_1650428_-	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_001128433.1|1650482_1650848_+	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_000773059.1|1651127_1651508_+	DUF2513 domain-containing protein	NA	Q4ZCQ5	Staphylococcus_virus	100.0	5.8e-68
WP_001148860.1|1651494_1651692_-	hypothetical protein	NA	A7TWF5	Staphylococcus_phage	100.0	4.6e-24
WP_000362644.1|1651761_1651974_+	hypothetical protein	NA	D2JGJ1	Staphylococcus_phage	100.0	7.6e-33
WP_000435357.1|1652178_1652622_-	hypothetical protein	NA	A7TWF2	Staphylococcus_phage	100.0	8.9e-76
WP_000213811.1|1652669_1652882_-	helix-turn-helix transcriptional regulator	NA	A7TWF1	Staphylococcus_phage	100.0	1.6e-30
WP_020807995.1|1653033_1653765_+	helix-turn-helix transcriptional regulator	NA	S4SVC5	Staphylococcus_phage	100.0	6.9e-134
WP_000705240.1|1653834_1654017_+	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_001795334.1|1654052_1654199_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	1.2e-16
WP_000191466.1|1654195_1654810_-	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
WP_000264751.1|1654935_1656141_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
WP_001817850.1|1656183_1658211_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	100.0	2.1e-116
1656142:1656253	attR	CTTAAATCCGCCCTTTTTTTGCCCTTATATTTTTTACAAGCTTTATAAAACGCTTGAGAACACTGGCGTTAAAGCTTTTCTTGAAATAAACATATCATCATAATGTGATGGT	NA	NA	NA	NA
WP_001557355.1|1658203_1659130_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000987774.1|1659373_1661125_-	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	33.2	2.2e-21
WP_000064078.1|1661105_1661831_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
>prophage 6
NZ_CP029087	Staphylococcus aureus strain AR461 chromosome, complete genome	2909586	1795310	1804353	2909586	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1795310_1795829_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595011.1|1795850_1798124_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_108711067.1|1798326_1800606_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.4	5.3e-31
WP_001160682.1|1800880_1801141_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1801159_1802299_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|1802321_1803347_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005768.1|1803348_1804353_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 7
NZ_CP029087	Staphylococcus aureus strain AR461 chromosome, complete genome	2909586	1934497	1996706	2909586	protease,tRNA	Staphylococcus_phage(95.65%)	59	NA	NA
WP_001050568.1|1934497_1941058_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.3	6.1e-306
WP_000836461.1|1941383_1941695_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_001108730.1|1941716_1944131_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_001025067.1|1944421_1945603_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_000526539.1|1945712_1946666_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|1946662_1947226_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1947348_1947750_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1948321_1949149_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1949151_1949271_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196362.1|1949381_1950383_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
WP_001008549.1|1950504_1950969_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001159037.1|1950981_1952163_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_000493887.1|1952173_1952806_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_000384185.1|1952812_1953844_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	4.0e-196
WP_001261668.1|1954336_1955839_-	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000221177.1|1956361_1956676_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_000989121.1|1956675_1957968_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_001032833.1|1958054_1958909_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1959184_1959409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671057.1|1959607_1960078_+	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_001153742.1|1960190_1960634_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030469.1|1960620_1961064_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001168903.1|1961359_1961995_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1962434_1963148_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091442.1|1963407_1963710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1963965_1964331_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623470.1|1964327_1964681_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_000453306.1|1966677_1967511_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000366163.1|1967722_1968631_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933820.1|1968752_1969949_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000109906.1|1970320_1971913_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_108711088.1|1972290_1973037_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	5.4e-142
WP_000672013.1|1973041_1973515_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_000718107.1|1973580_1973838_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778528.1|1973834_1974836_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
WP_000348364.1|1974840_1976319_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_012840523.1|1976477_1976933_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_001795210.1|1977235_1977886_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	2.9e-51
WP_000070642.1|1977966_1978962_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
WP_000669024.1|1979036_1979663_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
WP_000627540.1|1979703_1980045_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000414216.1|1980145_1980718_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_001801861.1|1982072_1982168_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001792025.1|1982290_1982392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072627.1|1983467_1984697_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	4.0e-134
WP_001793440.1|1984689_1986429_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	2.4e-289
WP_001791797.1|1986409_1986544_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038752.1|1986606_1987326_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
WP_011447030.1|1987427_1987535_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038704.1|1987483_1988203_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_001038872.1|1988323_1989043_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
WP_001039454.1|1989100_1989823_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_001039427.1|1989947_1990655_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
WP_001092780.1|1991618_1992200_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.8	9.6e-54
WP_000469591.1|1992672_1992891_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	80.6	2.0e-25
WP_000550252.1|1993146_1993620_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000543854.1|1993624_1994416_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000782463.1|1994785_1995769_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_000473596.1|1995770_1996706_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
>prophage 8
NZ_CP029087	Staphylococcus aureus strain AR461 chromosome, complete genome	2909586	2090394	2183343	2909586	integrase,tail,head,portal,terminase,tRNA,holin,capsid,protease	Staphylococcus_phage(84.62%)	113	2086831:2086855	2185629:2185653
2086831:2086855	attL	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
WP_000170162.1|2090394_2090697_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957020.1|2091063_2092602_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831700.1|2092690_2093890_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774556.1|2093902_2095906_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
WP_000992924.1|2095909_2098102_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272056.1|2098098_2098791_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|2098962_2099265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|2099373_2100669_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827746.1|2101528_2102695_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434933.1|2102725_2103052_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669862.1|2103343_2103517_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|2103497_2104100_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040866.1|2104370_2105192_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000284436.1|2105184_2106654_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
WP_000897635.1|2106837_2107914_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177828.1|2107933_2108728_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|2108799_2108907_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323161.1|2108917_2110480_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275727.1|2110684_2111782_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	3.3e-47
WP_000149686.1|2112150_2112711_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|2112763_2113693_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001792184.1|2113885_2114059_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021211.1|2114110_2115490_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181315.1|2115609_2116638_-	lactonase family protein	NA	NA	NA	NA	NA
WP_000205106.1|2116907_2117309_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|2117881_2118055_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188043.1|2118505_2119546_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713072.1|2119602_2120445_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|2120441_2120999_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|2121058_2121583_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|2121703_2122267_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221651.1|2122332_2123073_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763043.1|2123072_2123945_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
WP_000645727.1|2123941_2124622_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991306.1|2124622_2125519_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000691584.1|2125515_2125896_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|2126153_2126330_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|2126572_2126671_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068542.1|2126870_2128157_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000671712.1|2128435_2128726_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001557458.1|2128740_2130171_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000669789.1|2131128_2131308_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|2131618_2131879_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|2131931_2132282_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_000727649.1|2132966_2133416_+	chemotaxis-inhibiting protein CHIPS	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
WP_094969667.1|2133510_2133969_-	amidase	NA	R9QTN8	Staphylococcus_phage	98.0	4.1e-84
WP_000919350.1|2134494_2134986_-	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
WP_000861038.1|2135176_2135932_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|2135943_2136198_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_001791821.1|2136249_2136357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|2136409_2136586_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000539688.1|2136735_2137032_-	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_001040261.1|2137089_2137377_-	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_001153681.1|2137423_2137576_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_000582154.1|2137565_2141351_-	hypothetical protein	NA	Q6R866	Staphylococcus_virus	98.3	0.0e+00
WP_000567396.1|2141366_2142851_-|tail	phage tail protein	tail	A0A2I6PDJ0	Staphylococcus_phage	99.8	4.5e-297
WP_001557459.1|2142847_2147380_-|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	98.9	0.0e+00
WP_001096355.1|2147624_2147975_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_071621395.1|2148024_2148249_-	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_000985142.1|2148290_2148935_-|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	99.1	1.9e-119
WP_000565498.1|2148935_2149343_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114341.1|2149339_2149744_-	hypothetical protein	NA	A0A1W6JPJ1	Staphylococcus_phage	100.0	2.5e-69
WP_000755150.1|2149740_2150103_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150936.1|2150086_2150371_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238241.1|2150360_2150645_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	97.9	5.2e-45
WP_000154565.1|2150664_2151810_-|capsid	phage major capsid protein	capsid	A0A1W6JPL4	Staphylococcus_phage	99.5	6.2e-214
WP_000861911.1|2151832_2152570_-|protease	Clp protease ClpP	protease	A0A1W6JPK0	Staphylococcus_phage	100.0	1.8e-129
WP_000025268.1|2152553_2153717_-|portal	phage portal protein	portal	A0A1W6JPQ9	Staphylococcus_phage	100.0	1.8e-216
WP_000625096.1|2153732_2155394_-|terminase	terminase large subunit	terminase	A0A075M4D3	Staphylococcus_phage	100.0	0.0e+00
WP_000402904.1|2155390_2155735_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988332.1|2155865_2156165_-	HNH endonuclease	NA	A0A2I6PDH9	Staphylococcus_phage	100.0	3.5e-52
WP_000590122.1|2156396_2156813_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_001557462.1|2156840_2157041_-	DUF1514 family protein	NA	D2JLD9	Staphylococcus_phage	98.5	5.3e-28
WP_000595265.1|2157040_2157190_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000195784.1|2157186_2157393_-	DUF1381 domain-containing protein	NA	A0A2I6PEA2	Staphylococcus_phage	94.1	1.1e-17
WP_001282077.1|2157389_2157635_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	98.8	2.5e-35
WP_000185693.1|2157671_2158208_-	hypothetical protein	NA	Q9MBR0	Staphylococcus_prophage	100.0	1.6e-95
WP_001065108.1|2158204_2158450_-	DUF1024 family protein	NA	Q8SDV5	Staphylococcus_phage	95.1	1.7e-36
WP_000178987.1|2158464_2158713_-	hypothetical protein	NA	A0A0K1LL46	Staphylococcus_phage	96.3	7.5e-40
WP_000111491.1|2158709_2158967_-	DUF3310 domain-containing protein	NA	A0A1X9H067	Staphylococcus_phage	98.8	6.3e-42
WP_000101279.1|2158966_2159338_-	hypothetical protein	NA	A0A2I6PDG3	Staphylococcus_phage	91.1	1.4e-50
WP_000401969.1|2159350_2159755_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A075M042	Staphylococcus_phage	100.0	8.4e-73
WP_000338528.1|2159763_2159982_-	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000148333.1|2159988_2160882_-	DnaD domain-containing protein	NA	A0A1P8L6F0	Staphylococcus_phage	100.0	3.2e-141
WP_000934759.1|2160911_2161382_-	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
WP_064135358.1|2161382_2162000_-	MBL fold metallo-hydrolase	NA	A0A1P8L6F7	Staphylococcus_phage	100.0	1.2e-86
WP_000180600.1|2162080_2163001_-	recombinase RecT	NA	A0A1P8L6F6	Staphylococcus_phage	100.0	5.1e-166
WP_000700554.1|2163002_2164946_-	AAA family ATPase	NA	A0A1P8L6F1	Staphylococcus_phage	100.0	0.0e+00
WP_001205732.1|2164954_2165218_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000291510.1|2165226_2165487_-	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_000165371.1|2165491_2165794_-	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000048129.1|2165888_2166050_-	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_001120201.1|2166046_2166370_-	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000762521.1|2166424_2166805_+	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001148862.1|2166791_2166989_-	hypothetical protein	NA	O80075	Staphylococcus_phage	87.7	3.5e-24
WP_001148338.1|2167004_2167754_-	antirepressor	NA	B7T097	Staphylococcus_virus	99.6	3.4e-136
WP_000772137.1|2167810_2168020_+	hypothetical protein	NA	A0A2I6PDR8	Staphylococcus_phage	100.0	9.1e-31
WP_000939495.1|2168012_2168153_-	hypothetical protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
WP_000435360.1|2168167_2168611_-	hypothetical protein	NA	W5R971	Staphylococcus_phage	100.0	1.5e-75
WP_000639923.1|2168623_2168866_-	DUF739 family protein	NA	A0A1X9H035	Staphylococcus_phage	100.0	1.6e-39
WP_001083975.1|2169029_2169746_+	helix-turn-helix domain-containing protein	NA	A0A1X9H038	Staphylococcus_phage	100.0	5.4e-131
WP_001557601.1|2169757_2170612_+	restriction endonuclease	NA	A0A1X9H037	Staphylococcus_phage	100.0	7.3e-151
WP_000109189.1|2170828_2171014_+	hypothetical protein	NA	U5U7D6	Staphylococcus_phage	100.0	2.3e-25
WP_000705245.1|2171084_2171267_+	hypothetical protein	NA	A0A0H3U4Z4	Staphylococcus_phage	96.7	6.9e-27
WP_001549185.1|2171345_2172059_+	toxin MazF	NA	A0A1X9H026	Staphylococcus_phage	100.0	5.0e-129
WP_000857200.1|2172249_2173287_+|integrase	site-specific integrase	integrase	Q38086	Staphylococcus_phage	99.7	2.2e-178
WP_000595392.1|2174405_2175422_-	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
WP_000791411.1|2175443_2176499_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000206625.1|2176934_2178158_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_001045079.1|2178601_2179909_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000240642.1|2180448_2182065_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000917289.1|2182140_2182425_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000197635.1|2182599_2183343_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
2185629:2185653	attR	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
