bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	3.1|834557|26|NZ_CP029032|CRISPRCasFinder	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	96.15	26	1	0	1	26	797519	797494	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	797494-797519	CGGGGCCCCAACACAGAAGCAGGCGG	1
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	3.1|834557|26|NZ_CP029032|CRISPRCasFinder	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	96.15	26	1	0	1	26	2830235	2830260	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	2830235-2830260	CCGCCAGCTTCTATGTTGGGGCCCCG	1
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	3.1|834557|26|NZ_CP029032|CRISPRCasFinder	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	96.15	26	1	0	1	26	2830291	2830316	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	2830291-2830316	CCGCCAGCTTCTTTGTTGGGGCCCCG	1
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	3.1|834557|26|NZ_CP029032|CRISPRCasFinder	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	92.31	26	2	0	1	26	797575	797550	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	797550-797575	CGGGGCCCCAACATAGAAGCAGGCGG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	3.1|834557|26|NZ_CP029032|CRISPRCasFinder	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	92.31	26	2	0	1	26	940548	940523	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	940523-940548	CGGGGCCCCAACACAGAGGCTGGTGG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	4.1|877762|34|NZ_CP029032|CRISPRCasFinder	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	100.00	34	0	0	1	34	1366756	1366723	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1366723-1366756	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	4.1|877762|34|NZ_CP029032|CRISPRCasFinder	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	100.00	34	0	0	1	34	1455915	1455948	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1455915-1455948	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	0
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	5.1|940579|26|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	96.15	26	1	0	1	26	940523	940548	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-05	39.6	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	940523-940548	CGGGGCCCCAACACAGAGGCTGGTGG	1
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	5.1|940579|26|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	92.31	26	2	0	1	26	797494	797519	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	797494-797519	CGGGGCCCCAACACAGAAGCAGGCGG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	5.1|940579|26|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	92.31	26	2	0	1	26	2830260	2830235	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2830235-2830260	CCGCCAGCTTCTATGTTGGGGCCCCG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	5.1|940579|26|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	92.31	26	2	0	1	26	2830316	2830291	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2830291-2830316	CCGCCAGCTTCTTTGTTGGGGCCCCG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	5.3|940693|26|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	96.15	26	1	0	1	26	834638	834613	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-05	39.6	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	834613-834638	TCGTCAGCTTCTGTGTTGGGGCCCCG	1
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	5.3|940693|26|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	92.31	26	2	0	1	26	394889	394914	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-04	36.5	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	394889-394914	CGGGGCCCCAACAAAGAAGCTGACGA	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	7.1|2029529|33|NZ_CP029032|CRISPRCasFinder	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	96.97	33	1	0	1	33	834593	834625	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	834593-834625	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	7.1|2029529|33|NZ_CP029032|CRISPRCasFinder	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	96.97	33	1	0	1	33	1158585	1158553	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1158553-1158585	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	7.1|2029529|33|NZ_CP029032|CRISPRCasFinder	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	96.97	33	1	0	1	33	1366710	1366678	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1366678-1366710	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	7.1|2029529|33|NZ_CP029032|CRISPRCasFinder	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	96.97	33	1	0	1	33	1694551	1694583	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1694551-1694583	CATTATAGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	7.1|2029529|33|NZ_CP029032|CRISPRCasFinder	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	96.97	33	1	0	1	33	2664885	2664917	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	2664885-2664917	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	7.1|2029529|33|NZ_CP029032|CRISPRCasFinder	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	93.94	33	2	0	1	33	1455961	1455993	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-07	47.5	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1455961-1455993	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	9.1|2388946|33|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	93.94	33	2	0	1	33	834593	834625	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	834593-834625	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	9.1|2388946|33|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	93.94	33	2	0	1	33	1158585	1158553	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1158553-1158585	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	9.1|2388946|33|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	93.94	33	2	0	1	33	1366710	1366678	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1366678-1366710	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	9.1|2388946|33|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	93.94	33	2	0	1	33	1455961	1455993	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1455961-1455993	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	9.1|2388946|33|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	93.94	33	2	0	1	33	2664885	2664917	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	2664885-2664917	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	9.2|2389002|36|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	100.00	36	0	0	1	36	1158532	1158497	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	6e-11	58.6	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1158497-1158532	TAGAGAATTTCAAAAAGAAATTCTACAGACAATGCA	0
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	9.2|2389002|36|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	97.22	36	1	0	1	36	1872879	1872844	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	5e-10	55.5	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1872844-1872879	TAGAGAATTTCGAAAAGAAATTCTACAGACAATGCA	1
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	9.2|2389002|36|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	94.44	36	2	0	1	36	1694490	1694525	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1694490-1694525	TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTA	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	9.2|2389002|36|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	94.44	36	2	0	1	36	2040391	2040426	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	2040391-2040426	TGCATTGTCTGTAGAATTTCCTTTCGAAATTCTCTA	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	9.3|2389061|33|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	93.94	33	2	0	1	33	834593	834625	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	834593-834625	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	9.3|2389061|33|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	93.94	33	2	0	1	33	1158585	1158553	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1158553-1158585	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	9.3|2389061|33|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	93.94	33	2	0	1	33	1366710	1366678	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1366678-1366710	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP029032	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	9.3|2389061|33|NZ_CP029032|CRT	NZ_CP029032.1	Staphylococcus aureus subsp. aureus strain OXLIM chromosome, complete genome	93.94	33	2	0	1	33	2664885	2664917	433556-433656|672074-672166|834527-834612|877738-877819|940549-940831|1074222-1074309|2029506-2029584|2264761-2264911|2388923-2389116	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	2664885-2664917	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
