assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003051985.2_ASM305198v2	NZ_CP028578	Escherichia coli strain WCHEC005784 chromosome, complete genome	1	981811-982449	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	9,10,10	10	Orphan	cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA	NA|919aa|up_9|NZ_CP028578.2_968404_971161_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|434aa|up_8|NZ_CP028578.2_971217_972519_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_7|NZ_CP028578.2_972566_974801_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_6|NZ_CP028578.2_974878_975127_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_5|NZ_CP028578.2_975126_975462_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_4|NZ_CP028578.2_975533_976325_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|NZ_CP028578.2_976552_978190_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|NZ_CP028578.2_978276_979575_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_1|NZ_CP028578.2_979634_980507_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|224aa|up_0|NZ_CP028578.2_980800_981472_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP028578.2_983086_984565_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP028578.2_984591_985869_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP028578.2_986187_986973_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP028578.2_987042_988497_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP028578.2_988518_989928_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP028578.2_989905_990685_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP028578.2_990681_991542_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|450aa|down_7|NZ_CP028578.2_991641_992990_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|192aa|down_8|NZ_CP028578.2_993124_993700_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_9|NZ_CP028578.2_993716_993977_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]
GCF_003051985.2_ASM305198v2	NZ_CP028578	Escherichia coli strain WCHEC005784 chromosome, complete genome	2	1010936-1011571	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAA,GTGTTCCCCGCGCCAGCGGGGATAAA,GTGTTCCCCGCGCCAGCGGGGATAAA	26,26,26	0	0	NA	NA	I-E:I-E:I-E	8,9,10	10	TypeI-E	cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA	NA|51aa|up_9|NZ_CP028578.2_1000581_1000734_+	pfam01848, HOK_GEF, Hok/gef family	NA|371aa|up_8|NZ_CP028578.2_1000810_1001923_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	cas3|900aa|up_7|NZ_CP028578.2_1002277_1004977_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP028578.2_1005074_1006637_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP028578.2_1006633_1007170_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|NZ_CP028578.2_1007184_1008240_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP028578.2_1008250_1008997_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP028578.2_1008978_1009629_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP028578.2_1009625_1010549_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP028578.2_1010545_1010839_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP028578.2_1011594_1012632_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP028578.2_1012883_1013792_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP028578.2_1013793_1015221_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP028578.2_1015220_1015826_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP028578.2_1015875_1016199_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP028578.2_1016392_1016704_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP028578.2_1016722_1017433_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP028578.2_1017432_1017912_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP028578.2_1017908_1018958_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP028578.2_1018938_1019700_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_003051985.2_ASM305198v2	NZ_CP028578	Escherichia coli strain WCHEC005784 chromosome, complete genome	3	2212521-2212644	3	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA|30aa|down_7|NZ_CP028578.2_2221540_2221630_+	NA|471aa|up_9|NZ_CP028578.2_2201975_2203388_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP028578.2_2203944_2204154_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP028578.2_2204608_2205235_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP028578.2_2205255_2207358_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP028578.2_2207370_2208009_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP028578.2_2208072_2208741_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP028578.2_2208737_2209523_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP028578.2_2209526_2210339_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP028578.2_2210350_2211955_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP028578.2_2212080_2212386_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP028578.2_2212958_2214215_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP028578.2_2214255_2215629_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP028578.2_2215843_2216485_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP028578.2_2216524_2217673_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP028578.2_2217963_2219175_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP028578.2_2219287_2220220_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP028578.2_2220216_2221242_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP028578.2_2221540_2221630_+	NA	NA|390aa|down_8|NZ_CP028578.2_2221795_2222965_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP028578.2_2223199_2223781_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_003051985.2_ASM305198v2	NZ_CP028578	Escherichia coli strain WCHEC005784 chromosome, complete genome	4	2883658-2883749	4	CRISPRCasFinder	no		cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA|70aa|up_9|NZ_CP028578.2_2872734_2872944_-,NA	NA|70aa|up_9|NZ_CP028578.2_2872734_2872944_-	NA	NA|1321aa|up_8|NZ_CP028578.2_2872998_2876961_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP028578.2_2877000_2877639_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP028578.2_2877926_2879018_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP028578.2_2879017_2879710_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP028578.2_2879721_2880108_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP028578.2_2880115_2880916_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP028578.2_2880925_2881516_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP028578.2_2881526_2882021_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP028578.2_2882041_2883370_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP028578.2_2884172_2884769_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP028578.2_2884789_2885017_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP028578.2_2885054_2886296_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP028578.2_2886588_2887845_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP028578.2_2888105_2889026_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP028578.2_2889025_2889331_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP028578.2_2889482_2890082_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP028578.2_2890078_2892625_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP028578.2_2892624_2893797_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP028578.2_2893926_2894619_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_003051985.2_ASM305198v2	NZ_CP028578	Escherichia coli strain WCHEC005784 chromosome, complete genome	5	3176501-3176645	5	CRISPRCasFinder	no		cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA	NA|330aa|up_9|NZ_CP028578.2_3164399_3165389_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP028578.2_3165785_3166694_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP028578.2_3166885_3168907_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP028578.2_3169485_3170163_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP028578.2_3170155_3170911_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP028578.2_3170897_3172052_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP028578.2_3172048_3173089_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP028578.2_3173175_3174465_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP028578.2_3174523_3175000_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP028578.2_3175151_3176435_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP028578.2_3176668_3178930_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP028578.2_3179112_3180546_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP028578.2_3180621_3181674_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP028578.2_3181857_3182811_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP028578.2_3182851_3183847_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP028578.2_3184001_3184820_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP028578.2_3184820_3185879_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP028578.2_3185881_3186571_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP028578.2_3186570_3187344_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP028578.2_3187510_3187660_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_003051985.2_ASM305198v2	NZ_CP028578	Escherichia coli strain WCHEC005784 chromosome, complete genome	6	3426242-3426338	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA	NA|231aa|up_9|NZ_CP028578.2_3418037_3418730_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP028578.2_3418949_3419492_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP028578.2_3419962_3420829_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP028578.2_3420830_3421043_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP028578.2_3421150_3421672_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP028578.2_3421707_3423093_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP028578.2_3423266_3423761_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP028578.2_3423763_3424486_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP028578.2_3424603_3425113_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP028578.2_3425109_3426177_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP028578.2_3426371_3427265_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP028578.2_3427261_3428077_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP028578.2_3428087_3429347_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP028578.2_3429356_3431024_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|412aa|down_4|NZ_CP028578.2_3433187_3434423_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_5|NZ_CP028578.2_3434433_3435219_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_6|NZ_CP028578.2_3435446_3436592_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_7|NZ_CP028578.2_3436613_3437915_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_8|NZ_CP028578.2_3437971_3439333_-	PRK08044, PRK08044, allantoinase AllB	NA|485aa|down_9|NZ_CP028578.2_3439392_3440847_-	PRK11375, PRK11375, putative allantoin permease
GCF_003051985.2_ASM305198v2	NZ_CP028578	Escherichia coli strain WCHEC005784 chromosome, complete genome	7	3567159-3567303	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA|28aa|down_2|NZ_CP028578.2_3569348_3569432_-	NA|357aa|up_9|NZ_CP028578.2_3552297_3553368_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_8|NZ_CP028578.2_3553460_3554042_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|606aa|up_7|NZ_CP028578.2_3554046_3555864_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_6|NZ_CP028578.2_3556019_3557393_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_5|NZ_CP028578.2_3557468_3558788_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_4|NZ_CP028578.2_3559194_3560490_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_3|NZ_CP028578.2_3560547_3561237_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|up_2|NZ_CP028578.2_3561426_3562629_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1049aa|up_1|NZ_CP028578.2_3562625_3565772_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|395aa|up_0|NZ_CP028578.2_3565897_3567082_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|NZ_CP028578.2_3567326_3568235_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|304aa|down_1|NZ_CP028578.2_3568359_3569271_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|28aa|down_2|NZ_CP028578.2_3569348_3569432_-	NA	NA|95aa|down_3|NZ_CP028578.2_3569917_3570202_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_4|NZ_CP028578.2_3570273_3570951_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|64aa|down_5|NZ_CP028578.2_3571208_3571400_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_6|NZ_CP028578.2_3571449_3571974_-	PRK03731, aroL, shikimate kinase AroL	NA|153aa|down_7|NZ_CP028578.2_3572156_3572615_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|270aa|down_8|NZ_CP028578.2_3572734_3573544_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|372aa|down_9|NZ_CP028578.2_3573560_3574676_-	PRK10245, adrA, diguanylate cyclase AdrA; Provisional
GCF_003051985.2_ASM305198v2	NZ_CP028578	Escherichia coli strain WCHEC005784 chromosome, complete genome	8	4206697-4206846	8	CRISPRCasFinder	no	RT	cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Unclear	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA|59aa|up_9|NZ_CP028578.2_4196261_4196438_-,NA|62aa|up_8|NZ_CP028578.2_4196625_4196811_+,NA|213aa|up_6|NZ_CP028578.2_4197514_4198153_-,NA	NA|59aa|up_9|NZ_CP028578.2_4196261_4196438_-	NA	NA|62aa|up_8|NZ_CP028578.2_4196625_4196811_+	NA	NA|77aa|up_7|NZ_CP028578.2_4196907_4197138_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|213aa|up_6|NZ_CP028578.2_4197514_4198153_-	NA	NA|421aa|up_5|NZ_CP028578.2_4198182_4199445_-	PRK09692, PRK09692, integrase; Provisional	NA|340aa|up_4|NZ_CP028578.2_4199889_4200909_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP028578.2_4201036_4202539_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP028578.2_4202699_4203782_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP028578.2_4203781_4204882_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP028578.2_4205148_4206660_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP028578.2_4207013_4207457_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP028578.2_4207456_4210312_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|396aa|down_2|NZ_CP028578.2_4210363_4211551_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP028578.2_4211743_4212247_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP028578.2_4212292_4212709_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP028578.2_4212870_4213875_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|151aa|down_6|NZ_CP028578.2_4215797_4216250_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_7|NZ_CP028578.2_4216394_4216988_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_8|NZ_CP028578.2_4217058_4217772_+	PRK12742, PRK12742, SDR family oxidoreductase	NA|132aa|down_9|NZ_CP028578.2_4217902_4218298_+	cd02198, YjgH_like, YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
