The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP025222	Listeria monocytogenes strain ATCC 51775 chromosome, complete genome	2995531	122447	128972	2995531	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003721739.1|122447_122900_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|122905_123241_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003732219.1|123457_123886_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003732220.1|123897_124314_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	39.3	1.3e-20
WP_003732221.1|124591_124981_+	DUF5072 domain-containing protein	NA	NA	NA	NA	NA
WP_003721744.1|124993_125506_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003721745.1|125553_125856_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077904982.1|125897_126302_+	phenylalanine racemase	NA	NA	NA	NA	NA
WP_003732223.1|126288_128157_+	hypothetical protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_003721748.1|128153_128972_+|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	35.0	4.2e-39
>prophage 2
NZ_CP025222	Listeria monocytogenes strain ATCC 51775 chromosome, complete genome	2995531	1140278	1147701	2995531		Hokovirus(33.33%)	8	NA	NA
WP_003721506.1|1140278_1140662_+	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	40.7	1.4e-16
WP_003732709.1|1140683_1141667_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	34.6	4.1e-12
WP_020246559.1|1141681_1142695_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	32.0	7.9e-11
WP_003721509.1|1142903_1144394_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	49.7	9.5e-114
WP_003727000.1|1144405_1145230_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.6	9.7e-68
WP_003732711.1|1145242_1145551_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003732712.1|1145611_1146016_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_020246560.1|1146144_1147701_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	28.1	2.3e-17
>prophage 3
NZ_CP025222	Listeria monocytogenes strain ATCC 51775 chromosome, complete genome	2995531	1278573	1338082	2995531	protease,tRNA	Bacillus_virus(16.67%)	58	NA	NA
WP_003732792.1|1278573_1279713_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003732793.1|1279793_1280189_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.7e-14
WP_003727524.1|1280339_1280555_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003732794.1|1280673_1281207_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003732795.1|1281224_1281890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003732796.1|1282151_1283090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723884.1|1283204_1284488_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|1284673_1285933_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_003723887.1|1286051_1286618_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_003723888.1|1286652_1287222_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003723889.1|1287323_1287866_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003723890.1|1287875_1288739_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003732797.1|1288735_1289521_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	39.2	8.8e-26
WP_003732798.1|1289654_1290515_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_003732799.1|1290785_1292864_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	3.2e-107
WP_107681246.1|1292926_1294231_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_003724000.1|1294513_1295416_+	tyrosine recombinase XerC	NA	A0A097EYL9	Mycobacterium_phage	28.6	1.2e-13
WP_003724001.1|1295436_1295976_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003732800.1|1295989_1297399_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	28.7	3.7e-43
WP_003726695.1|1297419_1298199_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_003724129.1|1298301_1298721_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003724130.1|1298742_1299054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003724131.1|1299056_1299929_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_003724132.1|1299970_1300567_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003732802.1|1300724_1301132_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_003723731.1|1301312_1303280_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	6.7e-123
WP_003723732.1|1303276_1305736_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	1.1e-101
WP_003723733.1|1305818_1306286_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_003732805.1|1306615_1308409_+	lmo1289 family class 1 internalin	NA	NA	NA	NA	NA
WP_003723735.1|1308740_1310543_+	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_003723736.1|1310576_1312445_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	31.9	6.5e-43
WP_003723737.1|1312657_1313356_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	32.4	1.3e-12
WP_003723738.1|1313588_1315265_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_003732806.1|1315390_1316308_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|1316430_1316664_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_003732807.1|1316774_1317998_+	GTPase HflX	NA	NA	NA	NA	NA
WP_003723434.1|1317990_1319217_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|1319420_1319789_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003723435.1|1319859_1321194_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_003723436.1|1321337_1322633_+	arsenical efflux pump membrane protein ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	61.6	1.8e-145
WP_003723437.1|1322676_1323198_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003723438.1|1323228_1323843_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_003723439.1|1323999_1324329_+	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003723440.1|1324420_1324648_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003732809.1|1324794_1326789_+	transketolase	NA	NA	NA	NA	NA
WP_003723442.1|1327009_1327249_+	YneF family protein	NA	NA	NA	NA	NA
WP_003732810.1|1327299_1328142_-	DUF2785 domain-containing protein	NA	NA	NA	NA	NA
WP_003723444.1|1328160_1328892_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	59.1	1.2e-80
WP_003723445.1|1328913_1329420_-	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	66.7	4.0e-56
WP_003723446.1|1329429_1330734_-	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	52.1	9.5e-134
WP_010989732.1|1330723_1331929_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	47.1	4.9e-92
WP_003723448.1|1331906_1332281_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723449.1|1332573_1333302_+	UMP kinase	NA	NA	NA	NA	NA
WP_003723450.1|1333301_1333859_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_003732812.1|1334088_1334847_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
WP_003732813.1|1334860_1335649_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003732814.1|1335663_1336806_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_003723454.1|1336819_1338082_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 4
NZ_CP025222	Listeria monocytogenes strain ATCC 51775 chromosome, complete genome	2995531	1875097	1883383	2995531		Synechococcus_phage(33.33%)	8	NA	NA
WP_003733243.1|1875097_1875664_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.9	4.1e-25
WP_003733242.1|1875660_1876710_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.5	4.6e-62
WP_003722245.1|1876728_1878156_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_003733241.1|1878140_1880360_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.4	1.5e-160
WP_003733240.1|1880352_1881036_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003722248.1|1881039_1881285_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_003733239.1|1881296_1882010_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.7	2.7e-42
WP_003733238.1|1882090_1883383_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.6	7.2e-17
>prophage 5
NZ_CP025222	Listeria monocytogenes strain ATCC 51775 chromosome, complete genome	2995531	2207761	2233508	2995531	plate,holin	Listeria_phage(52.17%)	41	NA	NA
WP_107681282.1|2207761_2209891_-	DNA polymerase I	NA	A0A2H4J6W7	uncultured_Caudovirales_phage	38.5	1.1e-115
WP_140947019.1|2209902_2210163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069027273.1|2210234_2210621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069027272.1|2210621_2211374_-	hypothetical protein	NA	A0A2H4IZK6	uncultured_Caudovirales_phage	37.6	3.3e-30
WP_107681283.1|2211505_2212033_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069027316.1|2212093_2212990_-	hypothetical protein	NA	A0A142F1Q1	Bacillus_phage	40.3	3.9e-54
WP_107681284.1|2213324_2214668_-	AAA family ATPase	NA	A0A2H4IZL9	uncultured_Caudovirales_phage	44.1	5.8e-94
WP_107681285.1|2214657_2215095_-	hypothetical protein	NA	NA	NA	NA	NA
WP_097348336.1|2215337_2215604_-	hypothetical protein	NA	Q8W5W6	Listeria_phage	61.2	9.8e-22
WP_097348337.1|2215616_2216087_-	hypothetical protein	NA	D9J0I6	Brochothrix_phage	30.9	2.1e-14
WP_097348338.1|2216083_2216380_-	hypothetical protein	NA	NA	NA	NA	NA
WP_097348339.1|2216379_2216517_-	hypothetical protein	NA	Q8W5X0	Listeria_phage	76.7	6.6e-06
WP_061105355.1|2216648_2217278_-	hypothetical protein	NA	A0A191KBJ8	Streptococcus_virus	58.4	4.8e-67
WP_107681286.1|2217278_2217701_-	hypothetical protein	NA	A8ATE4	Listeria_phage	71.2	3.0e-33
WP_003731843.1|2217779_2217995_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077948149.1|2218178_2218634_-	class I SAM-dependent methyltransferase	NA	A8ATY8	Listeria_phage	90.7	1.5e-81
WP_060571405.1|2218630_2218858_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031669120.1|2219003_2219318_-	hypothetical protein	NA	NA	NA	NA	NA
WP_107681302.1|2219319_2219964_-	DNA replication protein	NA	A0A2H4J7I5	uncultured_Caudovirales_phage	49.1	3.8e-51
WP_107681287.1|2220011_2220383_-	hypothetical protein	NA	A0A142F1P2	Bacillus_phage	36.1	6.2e-22
WP_107681288.1|2220360_2220621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039120238.1|2220610_2220889_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157948392.1|2221184_2221361_-	hypothetical protein	NA	NA	NA	NA	NA
WP_107681289.1|2221541_2221826_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_061128859.1|2222075_2222405_+	helix-turn-helix transcriptional regulator	NA	R4IH08	Staphylococcus_phage	47.9	9.4e-14
WP_107681290.1|2222484_2222964_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_050018466.1|2222975_2223284_+	helix-turn-helix transcriptional regulator	NA	A0A1X9IGD3	Lactococcus_phage	50.8	2.0e-10
WP_157948393.1|2223293_2224130_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009933529.1|2224331_2224565_-	hypothetical protein	NA	R4IDW6	Listeria_phage	78.9	2.8e-28
WP_026747285.1|2224860_2225262_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064615930.1|2225262_2225694_+	hypothetical protein	NA	A8ATJ2	Listeria_phage	81.7	1.8e-25
WP_039120633.1|2225690_2226191_+	AP2 domain-containing protein	NA	A8ATW6	Listeria_phage	73.0	1.0e-64
WP_039120634.1|2226256_2226646_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003750018.1|2226642_2226996_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061112563.1|2226992_2227511_-	hypothetical protein	NA	NA	NA	NA	NA
WP_102578331.1|2227953_2228796_-	peptidase M15	NA	A0A059T7Y8	Listeria_phage	82.0	3.2e-127
WP_031659898.1|2228795_2229056_-|holin	phage holin	holin	A8ATB7	Listeria_phage	69.1	2.9e-26
WP_031659897.1|2229061_2229388_-	hypothetical protein	NA	A0A059TA22	Listeria_phage	82.7	2.6e-16
WP_107681292.1|2229447_2230578_-|plate	BppU family phage baseplate upper protein	plate	Q8W5Z4	Listeria_phage	55.3	4.1e-69
WP_107681293.1|2230584_2232768_-	hypothetical protein	NA	R4IDV9	Listeria_phage	33.5	2.0e-91
WP_054314970.1|2232764_2233508_-	hypothetical protein	NA	A0A0A8WHP7	Clostridium_phage	32.8	4.7e-29
>prophage 6
NZ_CP025222	Listeria monocytogenes strain ATCC 51775 chromosome, complete genome	2995531	2590937	2598781	2995531		Streptococcus_phage(50.0%)	7	NA	NA
WP_003722604.1|2590937_2591909_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_003722605.1|2591916_2592885_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.3	6.7e-68
WP_003722606.1|2592886_2593762_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
WP_003732494.1|2593869_2595600_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	54.0	1.3e-175
WP_026750232.1|2595641_2596703_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_003722609.1|2596719_2597703_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	36.9	2.2e-50
WP_003732496.1|2597821_2598781_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.4	2.9e-87
>prophage 7
NZ_CP025222	Listeria monocytogenes strain ATCC 51775 chromosome, complete genome	2995531	2888118	2898149	2995531		Tupanvirus(33.33%)	7	NA	NA
WP_003732116.1|2888118_2890272_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	34.1	6.7e-44
WP_003732117.1|2890295_2892068_-	DNA helicase RecQ	NA	A0A2K9L3P7	Tupanvirus	37.1	6.3e-80
WP_003722118.1|2892228_2893695_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.0	8.0e-97
WP_003732118.1|2893981_2894512_-	ADP-ribose-binding protein	NA	A0A0K1L687	Scale_drop_disease_virus	50.0	5.2e-30
WP_003732119.1|2894569_2896180_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.7	2.4e-46
WP_107681299.1|2896358_2896667_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003725314.1|2896694_2898149_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	30.3	1.9e-50
