assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003031915.1_ASM303191v1	NZ_CP025220	Listeria monocytogenes strain PIR00546 chromosome, complete genome	1	254174-254328	1	CRISPRCasFinder	no	cas3	csa3,DinG,cas3,WYL,casR,DEDDh	Unclear	TTTCCACCACCACCTACGGATGAAGAGTTAAGACTTGCTTTGCCAGAGAC	50	0	0	NA	NA	NA	1	1	Unclear	csa3,DinG,cas3,WYL,casR,DEDDh	NA,NA	NA|231aa|up_9|NZ_CP025220.1_241416_242109_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|403aa|up_8|NZ_CP025220.1_242105_243314_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|103aa|up_7|NZ_CP025220.1_243997_244306_+	PRK13259, PRK13259, septation regulator SpoVG	NA|103aa|up_6|NZ_CP025220.1_244424_244733_+	PRK13259, PRK13259, septation regulator SpoVG	NA|458aa|up_5|NZ_CP025220.1_245119_246493_+	PRK14354, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA|319aa|up_4|NZ_CP025220.1_246543_247500_+	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|238aa|up_3|NZ_CP025220.1_247543_248257_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|318aa|up_2|NZ_CP025220.1_248529_249483_-	cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C	NA|530aa|up_1|NZ_CP025220.1_249725_251315_+	pfam01289, Thiol_cytolysin, Thiol-activated cytolysin	NA|511aa|up_0|NZ_CP025220.1_251649_253182_+	COG3227, LasB, Zinc metalloprotease (elastase) [Amino acid transport and metabolism]	NA|290aa|down_0|NZ_CP025220.1_255336_256206_+	smart00770, Zn_dep_PLPC, Zinc dependent phospholipase C (alpha toxin)	NA|108aa|down_1|NZ_CP025220.1_256277_256601_+	pfam17606, DUF5502, Family of unknown function (DUF5502)	NA|141aa|down_2|NZ_CP025220.1_256771_257194_+	COG4808, COG4808, Uncharacterized protein conserved in bacteria [Function unknown]	NA|111aa|down_3|NZ_CP025220.1_257246_257579_-	PRK01119, PRK01119, putative heavy metal-binding protein	NA|244aa|down_4|NZ_CP025220.1_257645_258377_-	pfam08713, DNA_alkylation, DNA alkylation repair enzyme	NA|314aa|down_5|NZ_CP025220.1_258397_259339_-	PRK00066, ldh, L-lactate dehydrogenase; Reviewed	NA|208aa|down_6|NZ_CP025220.1_259632_260256_+	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed	NA|195aa|down_7|NZ_CP025220.1_260345_260930_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|187aa|down_8|NZ_CP025220.1_261036_261597_+	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	cas3|1180aa|down_9|NZ_CP025220.1_261710_265250_+	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]
GCF_003031915.1_ASM303191v1	NZ_CP025220	Listeria monocytogenes strain PIR00546 chromosome, complete genome	2	566648-566826	2	CRISPRCasFinder	no		csa3,DinG,cas3,WYL,casR,DEDDh	Orphan	TTAAGCAGTTTTGATACGAGCTC	23	0	0	NA	NA	NA	2	2	Orphan	csa3,DinG,cas3,WYL,casR,DEDDh	NA,NA|158aa|down_1|NZ_CP025220.1_569949_570423_+,NA|162aa|down_2|NZ_CP025220.1_570442_570928_+,NA|89aa|down_4|NZ_CP025220.1_571336_571603_+,NA|206aa|down_5|NZ_CP025220.1_572338_572956_+,NA|116aa|down_6|NZ_CP025220.1_573265_573613_+,NA|81aa|down_7|NZ_CP025220.1_574016_574259_+	NA|222aa|up_9|NZ_CP025220.1_551768_552434_-	COG3619, COG3619, Predicted membrane protein [Function unknown]	NA|252aa|up_8|NZ_CP025220.1_552454_553210_-	pfam16160, DUF4866, Domain of unknown function (DUF4866)	NA|720aa|up_7|NZ_CP025220.1_553326_555486_-	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|383aa|up_6|NZ_CP025220.1_555482_556631_-	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|316aa|up_5|NZ_CP025220.1_556635_557583_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|532aa|up_4|NZ_CP025220.1_557738_559334_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|428aa|up_3|NZ_CP025220.1_559468_560752_+	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|367aa|up_2|NZ_CP025220.1_560752_561853_+	COG3535, COG3535, Uncharacterized conserved protein [Function unknown]	NA|517aa|up_1|NZ_CP025220.1_561845_563396_+	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|513aa|up_0|NZ_CP025220.1_564029_565568_+	pfam05043, Mga, Mga helix-turn-helix domain	NA|690aa|down_0|NZ_CP025220.1_567814_569884_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|158aa|down_1|NZ_CP025220.1_569949_570423_+	NA	NA|162aa|down_2|NZ_CP025220.1_570442_570928_+	NA	NA|102aa|down_3|NZ_CP025220.1_570955_571261_+	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain	NA|89aa|down_4|NZ_CP025220.1_571336_571603_+	NA	NA|206aa|down_5|NZ_CP025220.1_572338_572956_+	NA	NA|116aa|down_6|NZ_CP025220.1_573265_573613_+	NA	NA|81aa|down_7|NZ_CP025220.1_574016_574259_+	NA	NA|326aa|down_8|NZ_CP025220.1_574341_575319_-	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|276aa|down_9|NZ_CP025220.1_576080_576908_+	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
GCF_003031915.1_ASM303191v1	NZ_CP025220	Listeria monocytogenes strain PIR00546 chromosome, complete genome	3	568472-569056	1	CRT	no		csa3,DinG,cas3,WYL,casR,DEDDh	Orphan	GATGTAAGTAATTTTGATACNAGTTCAGTAACTNATATG	39	0	0	NA	NA	NA	7	7	Orphan	csa3,DinG,cas3,WYL,casR,DEDDh	NA,NA|158aa|down_0|NZ_CP025220.1_569949_570423_+,NA|162aa|down_1|NZ_CP025220.1_570442_570928_+,NA|89aa|down_3|NZ_CP025220.1_571336_571603_+,NA|206aa|down_4|NZ_CP025220.1_572338_572956_+,NA|116aa|down_5|NZ_CP025220.1_573265_573613_+,NA|81aa|down_6|NZ_CP025220.1_574016_574259_+	NA|252aa|up_9|NZ_CP025220.1_552454_553210_-	pfam16160, DUF4866, Domain of unknown function (DUF4866)	NA|720aa|up_8|NZ_CP025220.1_553326_555486_-	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|383aa|up_7|NZ_CP025220.1_555482_556631_-	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|316aa|up_6|NZ_CP025220.1_556635_557583_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|532aa|up_5|NZ_CP025220.1_557738_559334_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|428aa|up_4|NZ_CP025220.1_559468_560752_+	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|367aa|up_3|NZ_CP025220.1_560752_561853_+	COG3535, COG3535, Uncharacterized conserved protein [Function unknown]	NA|517aa|up_2|NZ_CP025220.1_561845_563396_+	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|513aa|up_1|NZ_CP025220.1_564029_565568_+	pfam05043, Mga, Mga helix-turn-helix domain	NA|616aa|up_0|NZ_CP025220.1_565831_567679_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|158aa|down_0|NZ_CP025220.1_569949_570423_+	NA	NA|162aa|down_1|NZ_CP025220.1_570442_570928_+	NA	NA|102aa|down_2|NZ_CP025220.1_570955_571261_+	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain	NA|89aa|down_3|NZ_CP025220.1_571336_571603_+	NA	NA|206aa|down_4|NZ_CP025220.1_572338_572956_+	NA	NA|116aa|down_5|NZ_CP025220.1_573265_573613_+	NA	NA|81aa|down_6|NZ_CP025220.1_574016_574259_+	NA	NA|326aa|down_7|NZ_CP025220.1_574341_575319_-	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|276aa|down_8|NZ_CP025220.1_576080_576908_+	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	NA|120aa|down_9|NZ_CP025220.1_576935_577295_+	pfam11337, DUF3139, Protein of unknown function (DUF3139)
