assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003030205.1_ASM303020v1	NZ_CP028187	Campylobacter coli strain CFSAN054106 chromosome, complete genome	1	81833-82068	1,1	PILER-CR,CRISPRCasFinder	no	cas4	cas4,cas9,cas14j,DEDDh,WYL,csa3,cas1,cas2,c2c9_V-U4	Unclear	ATAATAAAATAACTATTTTACCATATAAACAATTAATAATAGGCTAAAACA,TAAACAATTAATAATAGGCTAAAAC	51,25	1	1	81884-81898	NZ_CP028188.1_20250-20236	NA:NA	2,3	3	Unclear	cas4,cas9,cas14j,DEDDh,WYL,csa3,cas1,cas2,c2c9_V-U4	NA|269aa|up_9|NZ_CP028187.1_72143_72950_-,NA|77aa|up_1|NZ_CP028187.1_81306_81537_+,NA|163aa|down_0|NZ_CP028187.1_82251_82740_-,NA|205aa|down_1|NZ_CP028187.1_83271_83886_-,NA|48aa|down_3|NZ_CP028187.1_84279_84423_-,NA|153aa|down_5|NZ_CP028187.1_87450_87909_-,NA|136aa|down_7|NZ_CP028187.1_89642_90050_-,NA|60aa|down_9|NZ_CP028187.1_90950_91130_-	NA|269aa|up_9|NZ_CP028187.1_72143_72950_-	NA	NA|222aa|up_8|NZ_CP028187.1_72936_73602_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|399aa|up_7|NZ_CP028187.1_73650_74847_-	PRK14121, PRK14121, tRNA (guanine-N(7)-)-methyltransferase; Provisional	NA|411aa|up_6|NZ_CP028187.1_74846_76079_-	COG3401, COG3401, Fibronectin type 3 domain-containing protein [General function prediction only]	NA|322aa|up_5|NZ_CP028187.1_76026_76992_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|367aa|up_4|NZ_CP028187.1_77070_78171_+	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|400aa|up_3|NZ_CP028187.1_78518_79718_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|313aa|up_2|NZ_CP028187.1_80139_81078_-	TIGR02225, Tyrosine_recombinase_XerD, tyrosine recombinase XerD	NA|77aa|up_1|NZ_CP028187.1_81306_81537_+	NA	NA|76aa|up_0|NZ_CP028187.1_81549_81777_+	cd07996, WGR_MMR_like, WGR domain of molybdate metabolism regulator and related proteins	NA|163aa|down_0|NZ_CP028187.1_82251_82740_-	NA	NA|205aa|down_1|NZ_CP028187.1_83271_83886_-	NA	NA|122aa|down_2|NZ_CP028187.1_83905_84271_-	pfam10686, DUF2493, Protein of unknown function (DUF2493)	NA|48aa|down_3|NZ_CP028187.1_84279_84423_-	NA	NA|389aa|down_4|NZ_CP028187.1_84507_85674_-	TIGR01391, DNA_primase, DNA primase, catalytic core	NA|153aa|down_5|NZ_CP028187.1_87450_87909_-	NA	NA|523aa|down_6|NZ_CP028187.1_87975_89544_-	pfam13708, DUF4942, Domain of unknown function (DUF4942)	NA|136aa|down_7|NZ_CP028187.1_89642_90050_-	NA	NA|261aa|down_8|NZ_CP028187.1_90138_90921_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|60aa|down_9|NZ_CP028187.1_90950_91130_-	NA
GCF_003030205.1_ASM303020v1	NZ_CP028187	Campylobacter coli strain CFSAN054106 chromosome, complete genome	2	117500-117863	2,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9	cas4,cas9,cas14j,DEDDh,WYL,csa3,cas1,cas2,c2c9_V-U4	 or Type II-C?,Type II-B,Type II-A,Type II-C, Type II-B	ATTTTACCATATAAACAATTAATAATAGGCTAAAACA,ATTTTACCATATAAACAATTAATAATAGGCTAAAAC,ATTTTANCATANAAACAATTAANAATAGGCTAAAAC	37,36,36	0	0	NA	NA	NA:NA:NA	3,5,5	5	orTypeII-C?,TypeII-B,TypeII-A,TypeII-C,TypeII-B	cas4,cas9,cas14j,DEDDh,WYL,csa3,cas1,cas2,c2c9_V-U4	NA|268aa|up_9|NZ_CP028187.1_107089_107893_+,NA|99aa|up_5|NZ_CP028187.1_112430_112727_+,NA|72aa|up_2|NZ_CP028187.1_114075_114291_+,NA|90aa|up_1|NZ_CP028187.1_114292_114562_+,NA|107aa|down_0|NZ_CP028187.1_117883_118204_-,NA|114aa|down_1|NZ_CP028187.1_118193_118535_-,NA|149aa|down_2|NZ_CP028187.1_118536_118983_-,NA|132aa|down_3|NZ_CP028187.1_118972_119368_-,NA|131aa|down_4|NZ_CP028187.1_119369_119762_-,NA|219aa|down_8|NZ_CP028187.1_122491_123148_-,NA|73aa|down_9|NZ_CP028187.1_123162_123381_-	NA|268aa|up_9|NZ_CP028187.1_107089_107893_+	NA	NA|248aa|up_8|NZ_CP028187.1_107910_108654_+	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|456aa|up_7|NZ_CP028187.1_108668_110036_+	TIGR03743, SXT_TraD, conjugative coupling factor TraD, SXT/TOL subfamily	NA|802aa|up_6|NZ_CP028187.1_110028_112434_+	TIGR01596, CRISPR-associated_endonuclease_Cas3-HD, CRISPR-associated endonuclease Cas3-HD	NA|99aa|up_5|NZ_CP028187.1_112430_112727_+	NA	NA|147aa|up_4|NZ_CP028187.1_112723_113164_+	cd13400, LT_IagB-like, Escherichia coli invasion protein IagB and similar proteins	NA|299aa|up_3|NZ_CP028187.1_113182_114079_+	COG1639, COG1639, Predicted signal transduction protein [Signal transduction mechanisms]	NA|72aa|up_2|NZ_CP028187.1_114075_114291_+	NA	NA|90aa|up_1|NZ_CP028187.1_114292_114562_+	NA	cas9|966aa|up_0|NZ_CP028187.1_114542_117440_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|107aa|down_0|NZ_CP028187.1_117883_118204_-	NA	NA|114aa|down_1|NZ_CP028187.1_118193_118535_-	NA	NA|149aa|down_2|NZ_CP028187.1_118536_118983_-	NA	NA|132aa|down_3|NZ_CP028187.1_118972_119368_-	NA	NA|131aa|down_4|NZ_CP028187.1_119369_119762_-	NA	NA|282aa|down_5|NZ_CP028187.1_119778_120624_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|335aa|down_6|NZ_CP028187.1_120638_121643_-	pfam05816, TelA, Toxic anion resistance protein (TelA)	NA|217aa|down_7|NZ_CP028187.1_121822_122473_-	COG1864, NUC1, DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism]	NA|219aa|down_8|NZ_CP028187.1_122491_123148_-	NA	NA|73aa|down_9|NZ_CP028187.1_123162_123381_-	NA
GCF_003030205.1_ASM303020v1	NZ_CP028187	Campylobacter coli strain CFSAN054106 chromosome, complete genome	3	141852-141953	3	CRISPRCasFinder	no		cas4,cas9,cas14j,DEDDh,WYL,csa3,cas1,cas2,c2c9_V-U4	Orphan	ATTTTACCATATAAACAATTAATAATAGGCTAAAAC	36	0	0	NA	NA	NA	1	1	Orphan	cas4,cas9,cas14j,DEDDh,WYL,csa3,cas1,cas2,c2c9_V-U4	NA|61aa|up_9|NZ_CP028187.1_133248_133431_+,NA|283aa|up_3|NZ_CP028187.1_138743_139592_+,NA|72aa|down_0|NZ_CP028187.1_142051_142267_-,NA|62aa|down_1|NZ_CP028187.1_142278_142464_-,NA|76aa|down_2|NZ_CP028187.1_143399_143627_+,NA|65aa|down_4|NZ_CP028187.1_144120_144315_+,NA|113aa|down_7|NZ_CP028187.1_150505_150844_-,NA|119aa|down_8|NZ_CP028187.1_150830_151187_-,NA|397aa|down_9|NZ_CP028187.1_151174_152365_-	NA|61aa|up_9|NZ_CP028187.1_133248_133431_+	NA	NA|257aa|up_8|NZ_CP028187.1_134616_135387_+	pfam13728, TraF, F plasmid transfer operon protein	NA|225aa|up_7|NZ_CP028187.1_135399_136074_+	TIGR02743, hypothetical_protein, type-F conjugative transfer system protein TraW	NA|333aa|up_6|NZ_CP028187.1_136090_137089_+	pfam06834, TraU, TraU protein	NA|221aa|up_5|NZ_CP028187.1_137111_137774_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|315aa|up_4|NZ_CP028187.1_137789_138734_+	pfam09673, TrbC_Ftype, Type-F conjugative transfer system pilin assembly protein	NA|283aa|up_3|NZ_CP028187.1_138743_139592_+	NA	NA|261aa|up_2|NZ_CP028187.1_139578_140361_+	pfam05818, TraT, Enterobacterial TraT complement resistance protein	NA|143aa|up_1|NZ_CP028187.1_140373_140802_+	COG2143, COG2143, Thioredoxin-related protein [Posttranslational modification, protein turnover, chaperones]	NA|336aa|up_0|NZ_CP028187.1_140803_141811_+	pfam12873, DUF3825, Domain of unknown function (DUF3825)	NA|72aa|down_0|NZ_CP028187.1_142051_142267_-	NA	NA|62aa|down_1|NZ_CP028187.1_142278_142464_-	NA	NA|76aa|down_2|NZ_CP028187.1_143399_143627_+	NA	NA|120aa|down_3|NZ_CP028187.1_143630_143990_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|65aa|down_4|NZ_CP028187.1_144120_144315_+	NA	NA|92aa|down_5|NZ_CP028187.1_144315_144591_+	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ	NA|722aa|down_6|NZ_CP028187.1_148343_150509_-	PRK12355, PRK12355, type-F conjugative transfer system mating-pair stabilization protein TraN	NA|113aa|down_7|NZ_CP028187.1_150505_150844_-	NA	NA|119aa|down_8|NZ_CP028187.1_150830_151187_-	NA	NA|397aa|down_9|NZ_CP028187.1_151174_152365_-	NA
GCF_003030205.1_ASM303020v1	NZ_CP028187	Campylobacter coli strain CFSAN054106 chromosome, complete genome	4	918900-919397	4,2,3	CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2	cas4,cas9,cas14j,DEDDh,WYL,csa3,cas1,cas2,c2c9_V-U4	 or Type II-C?,Type II-B,Type II-A,Type II-C, Type II-B	ATTTTACCATAAAGAAATTTAAAAAGGGACTAAAAC,ATTTTACCATAAAGAAATTTAAAAAGGGACTAAAAC,ATTTTACCATAAAGAAATTTAAAAAGGGACTAAAAC	36,36,36	1	1	919266-919295	NZ_CP028187.1_1549833-1549862	NA:NA:NA	7,7,5	7	orTypeII-C?,TypeII-B,TypeII-A,TypeII-C,TypeII-B	cas4,cas9,cas14j,DEDDh,WYL,csa3,cas1,cas2,c2c9_V-U4	NA,NA	NA|150aa|up_9|NZ_CP028187.1_907284_907734_+	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|195aa|up_8|NZ_CP028187.1_907957_908542_+	cd00741, Lipase, Lipase	NA|346aa|up_7|NZ_CP028187.1_908655_909693_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|244aa|up_6|NZ_CP028187.1_909699_910431_-	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only]	NA|250aa|up_5|NZ_CP028187.1_910405_911155_-	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|330aa|up_4|NZ_CP028187.1_911816_912806_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|485aa|up_3|NZ_CP028187.1_912826_914281_-	COG3069, DcuC, C4-dicarboxylate transporter [Energy production and conversion]	cas9|985aa|up_2|NZ_CP028187.1_914488_917443_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|297aa|up_1|NZ_CP028187.1_917439_918330_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|144aa|up_0|NZ_CP028187.1_918322_918754_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|397aa|down_0|NZ_CP028187.1_919514_920705_-	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism]	NA|149aa|down_1|NZ_CP028187.1_920708_921155_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|74aa|down_2|NZ_CP028187.1_921155_921377_-	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism]	NA|514aa|down_3|NZ_CP028187.1_921378_922920_-	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|383aa|down_4|NZ_CP028187.1_923032_924181_+	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase	NA|234aa|down_5|NZ_CP028187.1_924512_925214_+	pfam02613, Nitrate_red_del, Nitrate reductase delta subunit	NA|64aa|down_6|NZ_CP028187.1_925188_925380_+	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional	NA|181aa|down_7|NZ_CP028187.1_925379_925922_+	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E	NA|738aa|down_8|NZ_CP028187.1_925970_928184_+	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E	NA|214aa|down_9|NZ_CP028187.1_928187_928829_+	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family
