assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003030185.1_ASM303018v1	NZ_CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	1	252090-252265	1	PILER-CR	no	cas2,cas1,cas9	cas2,cas1,cas9,csa3,DEDDh,WYL,cas14j	Type II-B,Type II-C, or Type II-C?,Type II-A, Type II-B	GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATAGATATGTA	45	0	0	NA	NA	NA	2	2	TypeII-B,TypeII-C,orTypeII-C?,TypeII-A,TypeII-B	cas2,cas1,cas9,csa3,DEDDh,WYL,cas14j	NA,NA	NA|311aa|up_9|NZ_CP028185.1_241737_242670_-	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit	NA|214aa|up_8|NZ_CP028185.1_242666_243308_-	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family	NA|935aa|up_7|NZ_CP028185.1_243304_246109_-	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E	NA|64aa|up_6|NZ_CP028185.1_246108_246300_-	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional	NA|238aa|up_5|NZ_CP028185.1_246274_246988_-	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only]	NA|383aa|up_4|NZ_CP028185.1_247291_248440_-	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase	NA|514aa|up_3|NZ_CP028185.1_248563_250105_+	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|74aa|up_2|NZ_CP028185.1_250106_250328_+	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism]	NA|149aa|up_1|NZ_CP028185.1_250328_250775_+	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|397aa|up_0|NZ_CP028185.1_250778_251969_+	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism]	cas2|144aa|down_0|NZ_CP028185.1_252400_252832_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|297aa|down_1|NZ_CP028185.1_252824_253715_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|985aa|down_2|NZ_CP028185.1_253711_256666_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|408aa|down_3|NZ_CP028185.1_258436_259660_-	COG2245, COG2245, Predicted membrane protein [Function unknown]	NA|330aa|down_4|NZ_CP028185.1_259870_260860_-	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|202aa|down_5|NZ_CP028185.1_260920_261526_+	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|250aa|down_6|NZ_CP028185.1_261522_262272_+	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|244aa|down_7|NZ_CP028185.1_262246_262978_+	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only]	NA|346aa|down_8|NZ_CP028185.1_262974_264012_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|150aa|down_9|NZ_CP028185.1_264076_264526_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]
GCF_003030185.1_ASM303018v1	NZ_CP028185	Campylobacter jejuni strain CFSAN054107 chromosome, complete genome	2	280213-280325	1	CRISPRCasFinder	no	csa3	cas2,cas1,cas9,csa3,DEDDh,WYL,cas14j	Type I-A	TAGTTTTCTTAACTTTGGTAGTATAAAACAAGAAAA	36	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,csa3,DEDDh,WYL,cas14j	NA|184aa|up_2|NZ_CP028185.1_276005_276557_+,NA	NA|240aa|up_9|NZ_CP028185.1_269881_270601_-	COG4662, TupA, ABC-type tungstate transport system, periplasmic component [Coenzyme metabolism]	NA|270aa|up_8|NZ_CP028185.1_270646_271456_+	COG2998, TupA, tungsten ABC transporter substrate-binding protein [Coenzyme metabolism]	NA|256aa|up_7|NZ_CP028185.1_271597_272365_+	COG1540, COG1540, Uncharacterized proteins, homologs of lactam utilization protein B [General function prediction only]	NA|247aa|up_6|NZ_CP028185.1_272374_273115_+	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]	NA|322aa|up_5|NZ_CP028185.1_273095_274061_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|299aa|up_4|NZ_CP028185.1_274057_274954_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|193aa|up_3|NZ_CP028185.1_274986_275565_-	COG2249, MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only]	NA|184aa|up_2|NZ_CP028185.1_276005_276557_+	NA	NA|359aa|up_1|NZ_CP028185.1_276559_277636_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|770aa|up_0|NZ_CP028185.1_277767_280077_+	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|396aa|down_0|NZ_CP028185.1_283303_284491_+	cd17293, RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to Paenibacillus polymyxa SQR-21 SQR21 S subunit (S	NA|495aa|down_1|NZ_CP028185.1_285682_287167_+	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|140aa|down_2|NZ_CP028185.1_288103_288523_-	cd02233, cupin_HNL-like, Granulicella tundricola hydroxynitrile lyase (GtHNL) and related proteins, cupin domain	NA|392aa|down_3|NZ_CP028185.1_288579_289755_-	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|313aa|down_4|NZ_CP028185.1_290712_291651_+	COG0701, COG0701, Predicted permeases [General function prediction only]	csa3|106aa|down_5|NZ_CP028185.1_291660_291978_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|141aa|down_6|NZ_CP028185.1_291974_292397_+	cd16345, LMWP_ArsC, Arsenate reductase of the LMWP family	NA|348aa|down_7|NZ_CP028185.1_292390_293434_+	TIGR00832, Uncharacterized_transporter_slr0944, arsenical-resistance protein	NA|663aa|down_8|NZ_CP028185.1_293935_295924_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|789aa|down_9|NZ_CP028185.1_295965_298332_-	PRK15490, PRK15490, Vi polysaccharide biosynthesis glycosyltransferase TviE
GCF_003030185.1_ASM303018v1	NZ_CP028186	Campylobacter jejuni strain CFSAN054107 plasmid pGMI16-002, complete sequence	1	37772-37870	1	CRISPRCasFinder	no	cas14j	cas14j	Unclear	AAACTATTCTATTTATGTCAATTTT	25	0	0	NA	NA	NA	1	1	TypeV	cas2,cas1,cas9,csa3,DEDDh,WYL,cas14j	NA|247aa|up_9|NZ_CP028186.1_29570_30311_-,NA|184aa|up_7|NZ_CP028186.1_31721_32273_-,NA|94aa|up_6|NZ_CP028186.1_32466_32748_+,NA|204aa|up_5|NZ_CP028186.1_32776_33388_+,NA|220aa|up_4|NZ_CP028186.1_33391_34051_+,NA|88aa|up_2|NZ_CP028186.1_35479_35743_+,NA|70aa|up_1|NZ_CP028186.1_35902_36112_-,NA|151aa|down_2|NZ_CP028186.1_40267_40720_-,NA|64aa|down_3|NZ_CP028186.1_40723_40915_-,NA|108aa|down_6|NZ_CP028186.1_41995_42319_-	NA|247aa|up_9|NZ_CP028186.1_29570_30311_-	NA	NA|463aa|up_8|NZ_CP028186.1_30333_31722_-	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|184aa|up_7|NZ_CP028186.1_31721_32273_-	NA	NA|94aa|up_6|NZ_CP028186.1_32466_32748_+	NA	NA|204aa|up_5|NZ_CP028186.1_32776_33388_+	NA	NA|220aa|up_4|NZ_CP028186.1_33391_34051_+	NA	NA|411aa|up_3|NZ_CP028186.1_34132_35365_+	COG4643, COG4643, Uncharacterized protein conserved in bacteria [Function unknown]	NA|88aa|up_2|NZ_CP028186.1_35479_35743_+	NA	NA|70aa|up_1|NZ_CP028186.1_35902_36112_-	NA	NA|391aa|up_0|NZ_CP028186.1_36261_37434_-	cd00180, PKc, Catalytic domain of Protein Kinases	NA|73aa|down_0|NZ_CP028186.1_38161_38380_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|598aa|down_1|NZ_CP028186.1_38470_40264_+	pfam13481, AAA_25, AAA domain	NA|151aa|down_2|NZ_CP028186.1_40267_40720_-	NA	NA|64aa|down_3|NZ_CP028186.1_40723_40915_-	NA	NA|205aa|down_4|NZ_CP028186.1_41016_41631_-	PRK13413, mpi, master DNA invertase Mpi family serine-type recombinase	NA|126aa|down_5|NZ_CP028186.1_41627_42005_-	COG3309, VapD, Uncharacterized virulence-associated protein D [Function unknown]	NA|108aa|down_6|NZ_CP028186.1_41995_42319_-	NA	NA|88aa|down_7|NZ_CP028186.1_42488_42752_+	pfam04956, TrbC, TrbC/VIRB2 family	NA|923aa|down_8|NZ_CP028186.1_42770_45539_+	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|186aa|down_9|NZ_CP028186.1_45549_46107_+	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha)
GCF_003030185.1_ASM303018v1	NZ_CP028186	Campylobacter jejuni strain CFSAN054107 plasmid pGMI16-002, complete sequence	2	38086-38151	2	CRISPRCasFinder	no	cas14j	cas14j	Unclear	AAACTATTCTATTTATGTCAATTTT	25	0	0	NA	NA	NA	1	1	TypeV	cas2,cas1,cas9,csa3,DEDDh,WYL,cas14j	NA|247aa|up_9|NZ_CP028186.1_29570_30311_-,NA|184aa|up_7|NZ_CP028186.1_31721_32273_-,NA|94aa|up_6|NZ_CP028186.1_32466_32748_+,NA|204aa|up_5|NZ_CP028186.1_32776_33388_+,NA|220aa|up_4|NZ_CP028186.1_33391_34051_+,NA|88aa|up_2|NZ_CP028186.1_35479_35743_+,NA|70aa|up_1|NZ_CP028186.1_35902_36112_-,NA|151aa|down_2|NZ_CP028186.1_40267_40720_-,NA|64aa|down_3|NZ_CP028186.1_40723_40915_-,NA|108aa|down_6|NZ_CP028186.1_41995_42319_-	NA|247aa|up_9|NZ_CP028186.1_29570_30311_-	NA	NA|463aa|up_8|NZ_CP028186.1_30333_31722_-	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|184aa|up_7|NZ_CP028186.1_31721_32273_-	NA	NA|94aa|up_6|NZ_CP028186.1_32466_32748_+	NA	NA|204aa|up_5|NZ_CP028186.1_32776_33388_+	NA	NA|220aa|up_4|NZ_CP028186.1_33391_34051_+	NA	NA|411aa|up_3|NZ_CP028186.1_34132_35365_+	COG4643, COG4643, Uncharacterized protein conserved in bacteria [Function unknown]	NA|88aa|up_2|NZ_CP028186.1_35479_35743_+	NA	NA|70aa|up_1|NZ_CP028186.1_35902_36112_-	NA	NA|391aa|up_0|NZ_CP028186.1_36261_37434_-	cd00180, PKc, Catalytic domain of Protein Kinases	NA|73aa|down_0|NZ_CP028186.1_38161_38380_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|598aa|down_1|NZ_CP028186.1_38470_40264_+	pfam13481, AAA_25, AAA domain	NA|151aa|down_2|NZ_CP028186.1_40267_40720_-	NA	NA|64aa|down_3|NZ_CP028186.1_40723_40915_-	NA	NA|205aa|down_4|NZ_CP028186.1_41016_41631_-	PRK13413, mpi, master DNA invertase Mpi family serine-type recombinase	NA|126aa|down_5|NZ_CP028186.1_41627_42005_-	COG3309, VapD, Uncharacterized virulence-associated protein D [Function unknown]	NA|108aa|down_6|NZ_CP028186.1_41995_42319_-	NA	NA|88aa|down_7|NZ_CP028186.1_42488_42752_+	pfam04956, TrbC, TrbC/VIRB2 family	NA|923aa|down_8|NZ_CP028186.1_42770_45539_+	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|186aa|down_9|NZ_CP028186.1_45549_46107_+	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha)
