The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP028190	Staphylococcus aureus strain CFSAN018749 chromosome, complete genome	2913744	4621	47682	2913744	portal,terminase,transposase,protease,holin,tail,capsid,head	Staphylococcus_prophage(50.0%)	64	NA	NA
WP_015980424.1|4621_5794_-	hypothetical protein	NA	Q9MBN0	Staphylococcus_prophage	100.0	2.0e-215
WP_000273396.1|5807_6227_-	hypothetical protein	NA	Q9MBN1	Staphylococcus_prophage	100.0	8.7e-81
WP_000669582.1|6756_7725_-	bi-component leukocidin LukMF' subunit F'	NA	Q9MBN2	Staphylococcus_prophage	100.0	2.0e-181
WP_015980423.1|7726_8653_-	bi-component leukocidin LukMF' subunit M	NA	Q9MBN3	Staphylococcus_prophage	100.0	1.4e-176
WP_000861033.1|9000_9756_-	CHAP domain-containing protein	NA	Q9MBN4	Staphylococcus_prophage	100.0	3.4e-152
WP_000611513.1|9767_10022_-|holin	phage holin	holin	Q9MBN5	Staphylococcus_prophage	100.0	5.3e-41
WP_000539688.1|10560_10857_-	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_001040261.1|10914_11202_-	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_053865854.1|11248_11401_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	98.0	2.0e-19
WP_015980422.1|11390_15176_-	hypothetical protein	NA	Q9MBN9	Staphylococcus_prophage	100.0	0.0e+00
WP_015980421.1|15191_16682_-	hypothetical protein	NA	Q9MBP0	Staphylococcus_prophage	100.0	1.4e-298
WP_076050712.1|16681_21331_-|tail	phage tail tape measure protein	tail	A0A1V0E5H1	Staphylococcus_phage	97.7	0.0e+00
WP_000571956.1|21387_21510_-	hypothetical protein	NA	D2JLF6	Staphylococcus_phage	97.5	2.6e-14
WP_000442601.1|21569_22016_-	hypothetical protein	NA	D2JLF5	Staphylococcus_phage	100.0	5.4e-73
WP_000570651.1|22080_23034_-|tail	phage tail protein	tail	A7TWD0	Staphylococcus_phage	99.7	1.8e-174
WP_000611451.1|23034_23415_-	hypothetical protein	NA	Q9MBP5	Staphylococcus_prophage	100.0	3.4e-68
WP_000501244.1|23411_23789_-	HK97 gp10 family phage protein	NA	D2JLF2	Staphylococcus_phage	100.0	1.1e-61
WP_053865856.1|23788_24088_-|head,tail	head-tail adaptor protein	head,tail	D2JLF1	Staphylococcus_phage	99.0	1.2e-52
WP_020967614.1|24114_25761_-|transposase	IS1182-like element ISSau3 family transposase	transposase	Q9MBP7	Staphylococcus_prophage	99.8	1.0e-294
WP_015980416.1|26025_26367_-	hypothetical protein	NA	Q9MBP8	Staphylococcus_prophage	100.0	6.9e-60
WP_001252099.1|26375_26534_-	hypothetical protein	NA	D2JLE9	Staphylococcus_phage	100.0	3.2e-20
WP_000849952.1|26569_27817_-|capsid	phage major capsid protein	capsid	D2JLE8	Staphylococcus_phage	100.0	1.7e-201
WP_000032525.1|27904_28489_-|head,protease	HK97 family phage prohead protease	head,protease	D2JLE7	Staphylococcus_phage	100.0	9.8e-107
WP_011447040.1|28481_29672_-|portal	phage portal protein	portal	D2JLE6	Staphylococcus_phage	100.0	1.8e-224
WP_000644968.1|29737_29977_-	hypothetical protein	NA	O80042	Staphylococcus_phage	100.0	7.0e-35
WP_053865850.1|29951_31646_-|terminase	terminase	terminase	D2JLE4	Staphylococcus_phage	99.8	0.0e+00
WP_000919026.1|31648_32116_-|terminase	phage terminase small subunit P27 family	terminase	D2JLE3	Staphylococcus_phage	100.0	1.1e-81
WP_000817289.1|32246_32591_-	HNH endonuclease	NA	D2JLE2	Staphylococcus_phage	100.0	4.2e-65
WP_000406191.1|32606_33059_-	nucleoside triphosphate pyrophosphohydrolase family protein	NA	D2JLE1	Staphylococcus_phage	100.0	1.4e-79
WP_053865849.1|33173_33635_-	hypothetical protein	NA	D2JLE0	Staphylococcus_phage	100.0	3.6e-72
WP_000265043.1|33657_33858_-	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_015980412.1|33857_34007_-	hypothetical protein	NA	Q9MBQ7	Staphylococcus_prophage	100.0	3.7e-18
WP_001798144.1|34006_34399_-	hypothetical protein	NA	A0A2I6PDC1	Staphylococcus_phage	100.0	2.8e-65
WP_000483477.1|34382_34619_-	hypothetical protein	NA	A7TWB3	Staphylococcus_phage	100.0	1.9e-37
WP_000195831.1|34643_34880_-	DUF1381 domain-containing protein	NA	C8CH06	Staphylococcus_phage	100.0	1.1e-35
WP_000185693.1|34916_35453_-	hypothetical protein	NA	Q9MBR0	Staphylococcus_prophage	100.0	1.6e-95
WP_015980411.1|35445_35694_-	DUF1024 family protein	NA	Q9MBR1	Staphylococcus_prophage	100.0	3.1e-38
WP_031918300.1|35686_35971_-	phage protein	NA	Q9MBR2	Staphylococcus_prophage	98.9	1.4e-45
WP_015980409.1|35985_36234_-	hypothetical protein	NA	S4V683	Staphylococcus_phage	100.0	3.2e-43
WP_015980408.1|36234_36606_-	phi PVL ORF 50	NA	Q9MBR4	Staphylococcus_prophage	100.0	2.7e-54
WP_000772917.1|36617_36875_-	helix-turn-helix transcriptional regulator	NA	Q9MBR5	Staphylococcus_prophage	100.0	5.4e-41
WP_015980407.1|36875_37061_-	DUF3113 family protein	NA	Q9MBR6	Staphylococcus_prophage	100.0	9.2e-27
WP_015980406.1|37065_37470_-	DUF1064 domain-containing protein	NA	Q9MBR7	Staphylococcus_prophage	100.0	5.4e-72
WP_053865848.1|37870_38644_-	ATP-binding protein	NA	C5I645	Staphylococcus_phage	99.2	1.5e-142
WP_000504986.1|38653_39457_-	replication protein	NA	Q9MBR9	Staphylococcus_prophage	100.0	1.5e-121
WP_015980404.1|39428_40124_-	hypothetical protein	NA	Q9MBS0	Staphylococcus_prophage	100.0	2.3e-134
WP_016187439.1|40137_40566_-	single-stranded DNA-binding protein	NA	A0A2H4JHI1	uncultured_Caudovirales_phage	98.6	2.5e-59
WP_001043063.1|40565_41204_-	ERF family protein	NA	Q9MBS2	Staphylococcus_prophage	100.0	1.7e-115
WP_000002517.1|41203_41683_-	siphovirus Gp157 family protein	NA	Q9MBS3	Staphylococcus_prophage	100.0	8.1e-83
WP_000291093.1|41697_41958_-	DUF1108 family protein	NA	Q9MBS4	Staphylococcus_prophage	100.0	1.5e-43
WP_000219664.1|42051_42372_-	hypothetical protein	NA	Q9MBS5	Staphylococcus_prophage	100.0	1.6e-55
WP_000048122.1|42372_42540_-	DUF1270 domain-containing protein	NA	Q9MBS6	Staphylococcus_prophage	100.0	6.2e-22
WP_000594788.1|42532_42754_-	hypothetical protein	NA	Q9MBS7	Staphylococcus_prophage	100.0	1.5e-31
WP_000395456.1|42825_43056_+	hypothetical protein	NA	Q9MBS8	Staphylococcus_prophage	100.0	3.0e-35
WP_015980402.1|43222_44020_-	phage antirepressor Ant	NA	Q9MBT0	Staphylococcus_prophage	100.0	1.7e-146
WP_000772137.1|44076_44286_+	hypothetical protein	NA	A0A2I6PDR8	Staphylococcus_phage	100.0	9.1e-31
WP_000939495.1|44278_44419_-	hypothetical protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
WP_000435360.1|44433_44877_-	hypothetical protein	NA	W5R971	Staphylococcus_phage	100.0	1.5e-75
WP_000548576.1|44889_45129_-	helix-turn-helix transcriptional regulator	NA	Q9MBT3	Staphylococcus_prophage	100.0	8.0e-39
WP_000094091.1|45300_46011_+	helix-turn-helix transcriptional regulator	NA	Q9MBT4	Staphylococcus_prophage	100.0	2.6e-130
WP_000100503.1|46165_46351_+	hypothetical protein	NA	A0A1X9H0K5	Staphylococcus_phage	100.0	1.1e-24
WP_001558060.1|46440_46836_+	hypothetical protein	NA	I1W601	Staphylococcus_phage	100.0	1.4e-69
WP_001013104.1|46924_47071_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_015980400.1|47067_47682_-	hypothetical protein	NA	Q9MBT7	Staphylococcus_prophage	100.0	1.0e-106
>prophage 2
NZ_CP028190	Staphylococcus aureus strain CFSAN018749 chromosome, complete genome	2913744	899773	949985	2913744	protease,transposase	Streptococcus_phage(57.14%)	46	NA	NA
WP_001106056.1|899773_900448_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.7	2.9e-126
WP_020444595.1|900483_900873_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_000958858.1|901789_902533_+	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA	NA
WP_000872606.1|902629_903058_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_078099308.1|903103_905113_-	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NA	NA	NA	NA	NA
WP_000671996.1|906091_906520_-	VOC family protein	NA	NA	NA	NA	NA
WP_000750311.1|906600_907530_+	HTH domain-containing protein	NA	NA	NA	NA	NA
WP_001038847.1|907691_909680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000283873.1|909874_910984_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058155.1|910976_911345_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001015575.1|911344_912961_+	primase	NA	NA	NA	NA	NA
WP_000676595.1|913185_914865_+	recombinase family protein	NA	A0A0S2SXR4	Bacillus_phage	29.4	2.8e-45
WP_000175890.1|914953_915292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088403123.1|915291_915384_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001024802.1|915385_915697_+	DUF960 domain-containing protein	NA	NA	NA	NA	NA
WP_001092192.1|915711_916182_+	DUF1643 domain-containing protein	NA	NA	NA	NA	NA
WP_001105999.1|916222_916897_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.0e-127
WP_078098711.1|916928_917570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031775208.1|917846_918428_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001631039.1|918934_919294_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000391495.1|919500_919827_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000367007.1|919929_920028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088403146.1|920147_922082_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	36.3	8.6e-99
WP_016187232.1|923227_924556_-	persulfide dioxygenase-sulfurtransferase CstB	NA	NA	NA	NA	NA
WP_000085030.1|924574_925642_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000456195.1|925780_926041_+	persulfide-sensing transcriptional repressor CstR	NA	NA	NA	NA	NA
WP_000623679.1|926037_926796_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_016187230.1|927213_927738_+	DUF1541 domain-containing protein	NA	NA	NA	NA	NA
WP_000410451.1|928018_929809_+	DUF4209 domain-containing protein	NA	NA	NA	NA	NA
WP_016187229.1|929849_931007_+	hypothetical protein	NA	NA	NA	NA	NA
WP_107285560.1|931665_933690_+	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	29.9	1.3e-65
WP_037538689.1|933728_934253_+	DUF1541 domain-containing protein	NA	NA	NA	NA	NA
WP_076050610.1|934698_935895_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_031797727.1|936313_937579_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_031797728.1|938008_938716_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_031797729.1|938780_939014_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_026907429.1|939079_939379_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031797730.1|939426_939660_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_031797731.1|939852_941706_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	34.1	7.0e-98
WP_078375625.1|942069_942492_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_049949288.1|943421_943727_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_049949289.1|943758_944016_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_078161231.1|944154_945882_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	35.4	4.0e-79
WP_031590768.1|947578_947785_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_031590769.1|948181_949237_+	DUF418 domain-containing protein	NA	NA	NA	NA	NA
WP_031797735.1|949262_949985_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 3
NZ_CP028190	Staphylococcus aureus strain CFSAN018749 chromosome, complete genome	2913744	1210259	1272469	2913744	portal,terminase,transposase,integrase,protease,holin,tail,plate,capsid,head	Staphylococcus_phage(82.81%)	76	1203339:1203356	1257202:1257219
1203339:1203356	attL	GAAGAAAAACAAAGTGAA	NA	NA	NA	NA
WP_000277741.1|1210259_1211906_+|transposase	IS1182-like element ISSau3 family transposase	transposase	A0ZS58	Staphylococcus_virus	100.0	3.5e-295
WP_000477931.1|1212130_1213180_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000911024.1|1213192_1213870_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.4	1.2e-31
WP_107285517.1|1214028_1214169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031825880.1|1214158_1215109_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_001283968.1|1215451_1216570_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000002080.1|1216544_1217468_+	pseudouridine-5'-phosphate glycosidase	NA	NA	NA	NA	NA
WP_001022980.1|1217478_1218699_+	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA	NA
WP_000665741.1|1218803_1220336_-	sodium:solute symporter	NA	NA	NA	NA	NA
WP_001030738.1|1220375_1221257_-	N-acetylneuraminate lyase	NA	NA	NA	NA	NA
WP_000291432.1|1221414_1222275_+	ROK family protein	NA	NA	NA	NA	NA
WP_000667382.1|1222551_1223352_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000936720.1|1223491_1224160_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
WP_001077712.1|1224285_1225599_-	YjiH family protein	NA	NA	NA	NA	NA
WP_031794994.1|1228043_1229249_-|integrase	site-specific integrase	integrase	A0A1X9H094	Staphylococcus_phage	99.5	2.5e-221
WP_000191459.1|1229374_1229989_+	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
WP_078098954.1|1229985_1230132_-	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	95.8	9.8e-16
WP_000348133.1|1230446_1231367_-	exonuclease	NA	B5WZL1	Staphylococcus_phage	100.0	2.5e-173
WP_000801423.1|1231382_1231997_-	helix-turn-helix domain-containing protein	NA	B5WZL2	Staphylococcus_phage	100.0	9.0e-111
WP_001030311.1|1232168_1232396_+	hypothetical protein	NA	B5WZL3	Staphylococcus_phage	100.0	3.3e-34
WP_000939498.1|1232992_1233136_+	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
WP_000642492.1|1233125_1233335_-	hypothetical protein	NA	W5R9J5	Staphylococcus_phage	100.0	1.2e-30
WP_001025401.1|1233390_1233636_+	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_016170627.1|1233604_1233970_-	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	99.2	1.2e-62
WP_001097552.1|1234024_1234240_+	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_015994740.1|1234264_1234528_+	helix-turn-helix domain-containing protein	NA	B7T0G2	Staphylococcus_virus	100.0	2.8e-45
WP_001285949.1|1234539_1234701_+	DUF1270 domain-containing protein	NA	Q4ZDR6	Staphylococcus_virus	98.1	1.9e-20
WP_069990202.1|1234782_1235106_+	TrmB family transcriptional regulator	NA	A0A2I6PF12	Staphylococcus_phage	94.4	1.6e-50
WP_031775792.1|1235120_1235483_+	hypothetical protein	NA	Q4ZCH9	Staphylococcus_virus	99.2	1.9e-55
WP_107285518.1|1235479_1236646_+	DUF2800 domain-containing protein	NA	B5WZM3	Staphylococcus_phage	98.2	1.6e-217
WP_000647288.1|1236672_1237227_+	DUF2815 family protein	NA	M9QRS1	Staphylococcus_phage	100.0	1.4e-99
WP_075773759.1|1237295_1239248_+	DNA polymerase	NA	A0A2I6PE86	Staphylococcus_phage	99.8	0.0e+00
WP_001164630.1|1239260_1239446_+	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	98.4	2.1e-26
WP_000113981.1|1239445_1239847_+	PVL family protein	NA	A0A2I6PF14	Staphylococcus_phage	100.0	1.2e-68
WP_031918299.1|1240106_1240307_+	hypothetical protein	NA	A0A2I6PF32	Staphylococcus_phage	98.5	6.2e-29
WP_015968801.1|1240315_1240564_+	PVL orf 51-like protein	NA	Q8SDR2	Staphylococcus_virus	100.0	1.8e-41
WP_031918300.1|1240578_1240863_+	phage protein	NA	Q9MBR2	Staphylococcus_prophage	98.9	1.4e-45
WP_031918301.1|1240855_1241110_+	DUF1024 family protein	NA	A0A2I6PDI5	Staphylococcus_phage	91.7	3.0e-36
WP_075773754.1|1241072_1241267_+	hypothetical protein	NA	A7TWH6	Staphylococcus_phage	100.0	2.9e-23
WP_031918391.1|1241259_1241793_+	dUTP pyrophosphatase	NA	Q4ZDW8	Staphylococcus_virus	95.5	5.3e-91
WP_031823832.1|1241829_1242036_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	77.9	8.4e-21
WP_000141180.1|1242032_1242236_+	hypothetical protein	NA	A0A2I6PEQ8	Staphylococcus_phage	100.0	3.4e-30
WP_031918392.1|1242228_1242465_+	hypothetical protein	NA	A7TWB3	Staphylococcus_phage	98.7	9.6e-37
WP_031918393.1|1242448_1242841_+	phage protein	NA	A7TWI1	Staphylococcus_phage	98.5	1.2e-63
WP_031797327.1|1242840_1242993_+	transcriptional regulator	NA	A7TWI2	Staphylococcus_phage	98.0	2.6e-19
WP_000265251.1|1243060_1243261_+	DUF1514 family protein	NA	Q9B0E8	Staphylococcus_virus	100.0	3.8e-26
WP_031918308.1|1243312_1245760_+	phage-like protein	NA	M1RZC5	Staphylococcus_phage	99.0	0.0e+00
WP_015978074.1|1245862_1245967_-	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	2.7e-12
WP_015986200.1|1246100_1246391_+	VRR-NUC domain-containing protein	NA	A7TWI5	Staphylococcus_phage	100.0	4.9e-51
WP_015986201.1|1246371_1247739_+	DEAD/DEAH box helicase	NA	A7TWI6	Staphylococcus_phage	100.0	1.2e-264
WP_015986202.1|1247751_1248189_+	hypothetical protein	NA	A7TWI7	Staphylococcus_phage	100.0	6.1e-77
WP_107285519.1|1248345_1248678_+	HNH endonuclease	NA	A7TWI8	Staphylococcus_phage	97.8	3.1e-49
WP_000778933.1|1248789_1249095_+|terminase	terminase	terminase	A0A2I6PEQ6	Staphylococcus_phage	100.0	2.9e-49
WP_016187448.1|1249084_1250776_+|terminase	terminase large subunit	terminase	M9QX14	Staphylococcus_phage	100.0	0.0e+00
WP_021285987.1|1250780_1252019_+|portal	phage portal protein	portal	A0A2I6PF26	Staphylococcus_phage	99.8	3.4e-234
WP_000061866.1|1252002_1252776_+|protease	Clp protease ClpP	protease	A0A2I6PEQ7	Staphylococcus_phage	100.0	2.4e-137
WP_021285988.1|1252787_1253951_+|capsid	phage major capsid protein	capsid	A0A2I6PEQ3	Staphylococcus_phage	99.5	4.7e-217
WP_000050973.1|1254019_1254298_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
WP_000395498.1|1254309_1254642_+	hypothetical protein	NA	A0A2I6PES3	Staphylococcus_phage	100.0	4.1e-57
WP_000110023.1|1254638_1255040_+	hypothetical protein	NA	A0A2I6PF54	Staphylococcus_phage	100.0	8.1e-68
WP_001023806.1|1255040_1255436_+	DUF3168 domain-containing protein	NA	A0A2I6PEQ4	Staphylococcus_phage	100.0	8.8e-67
WP_000807536.1|1255470_1256112_+|tail	tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
WP_000169127.1|1256203_1256659_+	Ig domain-containing protein	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
WP_000589167.1|1256716_1257067_+	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000438833.1|1257108_1257267_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
1257202:1257219	attR	GAAGAAAAACAAAGTGAA	NA	NA	NA	NA
WP_021285989.1|1257280_1263481_+|tail	phage tail tape measure protein	tail	U5U762	Staphylococcus_phage	97.9	0.0e+00
WP_001190533.1|1263480_1264305_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_000384474.1|1264313_1265897_+	peptidase	NA	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
WP_000179858.1|1265896_1266187_+	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
WP_000429558.1|1266202_1268113_+	minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
WP_000067155.1|1268112_1269579_+|plate	BppU family phage baseplate upper protein	plate	M1TB09	Staphylococcus_phage	100.0	2.7e-254
WP_001166599.1|1269578_1269968_+	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000916020.1|1269960_1270125_+	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_000466784.1|1270170_1270470_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_031916949.1|1270605_1271043_+|holin	phage holin	holin	A0EWV0	Staphylococcus_virus	96.6	5.9e-72
WP_031916950.1|1271023_1272469_+	CHAP domain-containing protein	NA	A0EWV1	Staphylococcus_virus	98.8	5.0e-293
>prophage 4
NZ_CP028190	Staphylococcus aureus strain CFSAN018749 chromosome, complete genome	2913744	1669405	1677225	2913744		Hokovirus(16.67%)	10	NA	NA
WP_000244416.1|1669405_1670461_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|1670460_1671147_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|1671121_1671595_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093552.1|1671936_1672377_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637686.1|1672656_1673241_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062968.1|1673339_1674053_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|1674056_1674476_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_053865866.1|1674477_1675146_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_053865865.1|1675496_1676090_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	43.5	3.4e-38
WP_001217804.1|1676073_1677225_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
>prophage 5
NZ_CP028190	Staphylococcus aureus strain CFSAN018749 chromosome, complete genome	2913744	1691114	1705252	2913744		uncultured_Caudovirales_phage(50.0%)	13	NA	NA
WP_000663016.1|1691114_1692173_+	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	26.5	5.7e-20
WP_000197262.1|1692331_1692874_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429002.1|1693425_1694343_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	8.2e-07
WP_031788440.1|1694433_1694535_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193750.1|1694612_1696118_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930016.1|1696457_1696958_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	66.2	2.7e-52
WP_001068491.1|1696977_1697844_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|1698645_1699044_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|1699006_1701112_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|1701231_1702203_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000876311.1|1702579_1703551_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	80.2	7.8e-141
WP_001245566.1|1703537_1704494_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	60.0	5.5e-06
WP_000616865.1|1704490_1705252_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.1	7.2e-17
>prophage 6
NZ_CP028190	Staphylococcus aureus strain CFSAN018749 chromosome, complete genome	2913744	1884208	1927779	2913744	transposase,protease,bacteriocin,holin,tRNA	Streptococcus_phage(33.33%)	40	NA	NA
WP_094409958.1|1884208_1885776_-|transposase	IS3-like element ISSau2 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	51.8	1.0e-49
WP_038412973.1|1886071_1887718_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	98.5	5.9e-290
WP_107285533.1|1887744_1888734_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|1889028_1889424_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217728.1|1889794_1890514_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000959276.1|1890634_1891621_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_053865700.1|1891668_1893477_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	1.2e-46
WP_000896691.1|1893936_1894743_-	DsbA family protein	NA	NA	NA	NA	NA
WP_000214067.1|1894765_1895131_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000224620.1|1895234_1895828_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_001242102.1|1896013_1896361_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|1896377_1897013_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|1897029_1897839_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669938.1|1897835_1898690_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062404.1|1898710_1900096_+	magnesium transporter	NA	NA	NA	NA	NA
WP_000395156.1|1900105_1901950_+	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_000933195.1|1902227_1902998_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|1903193_1904279_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570704.1|1904620_1906189_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_000889176.1|1906331_1907090_+	esterase family protein	NA	NA	NA	NA	NA
WP_001060544.1|1907255_1907981_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000355329.1|1907982_1908834_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000600387.1|1909576_1910086_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001794241.1|1910198_1911407_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258649.1|1911366_1912542_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340133.1|1912973_1914458_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_001794242.1|1914438_1914699_+	hypothetical protein	NA	NA	NA	NA	NA
WP_053865699.1|1914698_1916261_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.3	3.8e-36
WP_000928413.1|1916562_1917366_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_001794169.1|1917584_1919909_+|protease	serine protease	protease	W5SAB9	Pithovirus	26.8	4.0e-10
WP_000021872.1|1919925_1921284_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414169.1|1921422_1922934_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|1923422_1923992_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876825.1|1924201_1924420_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668820.1|1924500_1925487_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|1925685_1925862_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033867.1|1925876_1926479_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_099119695.1|1926779_1926857_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_001790623.1|1927395_1927497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001794574.1|1927506_1927779_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
>prophage 7
NZ_CP028190	Staphylococcus aureus strain CFSAN018749 chromosome, complete genome	2913744	1963725	1972198	2913744		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861570.1|1963725_1964208_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	8.0e-22
WP_001010391.1|1964194_1965319_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174050.1|1965322_1966027_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	41.6	7.3e-48
WP_000848351.1|1966026_1966290_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666808.1|1966291_1966963_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032734.1|1966955_1969145_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.2	5.1e-140
WP_000483708.1|1969123_1970608_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	8.5e-46
WP_076050675.1|1970600_1971629_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	7.6e-62
WP_000238673.1|1971631_1972198_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	3.6e-29
>prophage 8
NZ_CP028190	Staphylococcus aureus strain CFSAN018749 chromosome, complete genome	2913744	2521967	2530279	2913744	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|2521967_2522753_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924211.1|2522878_2523769_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062173.1|2523778_2525125_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	1.4e-55
WP_000683921.1|2525238_2526339_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	30.6	3.0e-08
WP_000624581.1|2526341_2527019_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|2527149_2528256_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217253.1|2528479_2530279_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.5e-54
>prophage 9
NZ_CP028190	Staphylococcus aureus strain CFSAN018749 chromosome, complete genome	2913744	2599716	2608759	2913744	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|2599716_2600235_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595001.1|2600256_2602530_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	6.2e-64
WP_107285544.1|2602732_2605012_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|2605286_2605547_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|2605565_2606705_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|2606727_2607753_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005767.1|2607754_2608759_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 10
NZ_CP028190	Staphylococcus aureus strain CFSAN018749 chromosome, complete genome	2913744	2739597	2860566	2913744	portal,terminase,transposase,integrase,protease,holin,tRNA,plate,tail,head	Staphylococcus_phage(70.8%)	135	2809320:2809337	2864850:2864867
WP_107285549.1|2739597_2746146_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	88.6	6.3e-295
WP_000836472.1|2746469_2746781_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	96.1	4.5e-50
WP_001108722.1|2746802_2749217_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	98.8	0.0e+00
WP_107285550.1|2749508_2750690_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.5	3.6e-217
WP_053865681.1|2750799_2751753_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	99.3	6.4e-79
WP_000764425.1|2751749_2752313_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	95.7	1.1e-99
WP_000757543.1|2752431_2752833_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|2753405_2754233_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014937042.1|2754235_2754355_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196351.1|2754466_2755468_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.1	5.0e-183
WP_001008553.1|2755589_2756054_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	98.1	4.9e-69
WP_001159032.1|2756066_2757248_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
WP_000493891.1|2757258_2757891_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.0	8.4e-112
WP_001819953.1|2757897_2758929_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.3	5.8e-195
WP_001261683.1|2759421_2760924_-	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	5.0e-30
WP_000221190.1|2761566_2761881_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	1.3e-52
WP_000989104.1|2761880_2763173_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	95.1	2.6e-216
WP_001032833.1|2763259_2764114_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|2764389_2764614_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671059.1|2764812_2765283_+	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	85.8	7.7e-70
WP_001152695.1|2765395_2765839_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030476.1|2765825_2766269_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	77.4	2.4e-49
WP_001168914.1|2766566_2767202_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000492901.1|2767368_2767989_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001096494.1|2768446_2769160_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091444.1|2769418_2769721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|2769975_2770341_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623481.1|2770337_2770691_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	97.4	4.2e-20
WP_000453316.1|2770940_2771774_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.6	1.2e-158
WP_000366165.1|2771985_2772894_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.7	9.8e-138
WP_000933819.1|2773018_2774212_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000109909.1|2774583_2776176_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_001801476.1|2776468_2777215_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	97.2	3.3e-139
WP_000672010.1|2777219_2777693_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	9.5e-84
WP_000718107.1|2777758_2778016_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778539.1|2778012_2779014_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	96.7	8.5e-183
WP_000348372.1|2779018_2780497_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.2	2.4e-282
WP_016186903.1|2780655_2781111_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	94.5	3.5e-75
WP_001794016.1|2781413_2782064_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	88.4	1.0e-51
WP_000070654.1|2782144_2783140_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.2	3.8e-74
WP_000669038.1|2783215_2783842_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	84.1	4.5e-81
WP_000627550.1|2783882_2784227_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	5.1e-55
WP_000414222.1|2784324_2784897_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.8	3.2e-25
WP_001093574.1|2785045_2786413_-	FRG domain-containing protein	NA	NA	NA	NA	NA
WP_000125075.1|2786412_2786982_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	54.8	2.2e-39
WP_000747804.1|2787174_2787621_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_001801861.1|2788071_2788167_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001791232.1|2788289_2788391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094409958.1|2788967_2790535_-|transposase	IS3-like element ISSau2 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	51.8	1.0e-49
WP_000731421.1|2790671_2791115_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000182551.1|2792081_2794502_+	polysaccharide lyase 8 family protein	NA	NA	NA	NA	NA
WP_001819963.1|2794627_2794987_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000619920.1|2795214_2795664_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_001053714.1|2795706_2797317_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000095390.1|2797331_2797631_+	secretion protein	NA	NA	NA	NA	NA
WP_000413389.1|2797892_2799710_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000072622.1|2799746_2800901_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	36.3	7.8e-39
WP_107285551.1|2800893_2802633_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	98.5	1.6e-285
WP_001038742.1|2802812_2803532_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	98.3	1.0e-129
WP_001038734.1|2803701_2804418_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	97.1	6.6e-129
WP_053865858.1|2804581_2805298_-|protease	serine protease	protease	A0A2H4PQN5	Staphylococcus_phage	64.7	5.3e-86
WP_001038766.1|2805464_2806181_-|protease	serine protease	protease	A0A2H4PQN5	Staphylococcus_phage	62.6	5.5e-83
WP_001039022.1|2806304_2807024_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	93.7	6.4e-124
WP_000595635.1|2808038_2808554_+	membrane protein	NA	NA	NA	NA	NA
WP_000711497.1|2808800_2810147_+	DUF4041 domain-containing protein	NA	M1NRY5	Streptococcus_phage	51.3	6.7e-66
2809320:2809337	attL	TTATTTAATGCTGAAACT	NA	NA	NA	NA
WP_000617706.1|2810733_2810970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000736707.1|2812365_2813142_-	staphylococcal enterotoxin type G	NA	NA	NA	NA	NA
WP_107285552.1|2813425_2814181_-	staphylococcal enterotoxin type N	NA	A0A075M4C7	Staphylococcus_phage	40.4	1.9e-38
WP_000764684.1|2814219_2815005_-	staphylococcal enterotoxin type C1/U	NA	A0A097PAT7	Streptococcus_pyogenes_phage	42.7	2.9e-45
WP_000721567.1|2815158_2815887_-	staphylococcal enterotoxin type I	NA	A0A1X9H080	Staphylococcus_phage	39.8	1.3e-28
WP_000821649.1|2815921_2816641_-	staphylococcal enterotoxin type M	NA	A0A1X9H080	Staphylococcus_phage	34.6	4.9e-23
WP_147612242.1|2816922_2817705_-	exotoxin	NA	A0A1X9H080	Staphylococcus_phage	38.6	8.7e-34
WP_017804629.1|2818321_2818525_-	hypothetical protein	NA	Q4ZBW5	Staphylococcus_virus	62.7	1.8e-15
WP_103147408.1|2819067_2820513_-	CHAP domain-containing protein	NA	M9QQN5	Staphylococcus_phage	96.7	2.0e-286
WP_103147409.1|2820493_2820931_-|holin	phage holin	holin	M9QTA6	Staphylococcus_phage	98.6	2.6e-72
WP_107285553.1|2820981_2822994_-|plate	phage baseplate upper protein	plate	Q4ZA81	Staphylococcus_virus	95.5	0.0e+00
WP_103147411.1|2823006_2824881_-	CHAP domain-containing protein	NA	Q4ZBX1	Staphylococcus_virus	97.0	0.0e+00
WP_000466752.1|2825017_2825317_-	DUF2951 family protein	NA	B7T0E7	Staphylococcus_virus	100.0	2.5e-42
WP_001800921.1|2825357_2825531_-	XkdX family protein	NA	A0A059T7K6	Staphylococcus_phage	100.0	1.3e-27
WP_031867674.1|2825540_2825918_-	DUF2977 domain-containing protein	NA	B7T0E5	Staphylococcus_virus	96.0	6.4e-59
WP_103147412.1|2825917_2827741_-|plate	phage baseplate upper protein	plate	Q4ZDD5	Staphylococcus_virus	95.2	2.6e-283
WP_103147413.1|2827740_2829639_-	hypothetical protein	NA	A0A0H3U448	Staphylococcus_phage	91.0	0.0e+00
WP_001144710.1|2829651_2831538_-	peptidase	NA	Q4ZAG4	Staphylococcus_virus	100.0	0.0e+00
WP_000560197.1|2831548_2832484_-|tail	phage tail protein	tail	Q4ZB28	Staphylococcus_virus	100.0	6.3e-180
WP_107285554.1|2832498_2835642_-|terminase	terminase	terminase	Q4ZB30	Staphylococcus_virus	99.6	9.4e-305
WP_000204079.1|2835644_2835986_-	hypothetical protein	NA	W5R8J4	Staphylococcus_phage	100.0	3.5e-56
WP_000141087.1|2836006_2836501_-	hypothetical protein	NA	A7YGV7	Staphylococcus_virus	100.0	2.5e-87
WP_000046067.1|2836562_2837123_-	hypothetical protein	NA	A0A0H4ITY2	Staphylococcus_phage	100.0	5.9e-101
WP_000270199.1|2837109_2837547_-	DUF3168 domain-containing protein	NA	A0A0E3T9M9	Staphylococcus_phage	99.3	4.6e-77
WP_001151332.1|2837559_2837973_-	HK97 gp10 family phage protein	NA	A0A0E3XCY8	Staphylococcus_phage	100.0	1.5e-77
WP_000482989.1|2837959_2838295_-|head	phage head closure protein	head	A7YGU9	Staphylococcus_virus	99.1	3.0e-60
WP_000991901.1|2838287_2838602_-|head,tail	phage head-tail adapter protein	head,tail	A7YGU8	Staphylococcus_virus	97.1	2.4e-51
WP_000278800.1|2838601_2838928_-	hypothetical protein	NA	Q4ZAA2	Staphylococcus_virus	100.0	5.6e-51
WP_000194847.1|2838944_2839757_-	hypothetical protein	NA	Q4ZAA4	Staphylococcus_virus	99.6	3.1e-143
WP_000366935.1|2839773_2840364_-	hypothetical protein	NA	A0A0H4IP83	Staphylococcus_phage	83.7	9.4e-81
WP_107285555.1|2840461_2841442_-|head	phage head morphogenesis protein	head	A0A0E3XC69	Staphylococcus_phage	98.5	2.5e-179
WP_054189580.1|2841380_2842859_-|portal	phage portal protein	portal	A0A2H4PQK7	Staphylococcus_phage	99.8	2.3e-285
WP_001800917.1|2842812_2844021_-|terminase	PBSX family phage terminase large subunit	terminase	R4IG95	Staphylococcus_phage	99.8	2.3e-235
WP_029656172.1|2844013_2844331_-	hypothetical protein	NA	A0A2I6PCU5	Staphylococcus_phage	95.2	7.3e-48
WP_000286968.1|2844860_2845262_-	hypothetical protein	NA	A0A2H4PQK5	Staphylococcus_phage	100.0	5.6e-69
WP_000595257.1|2845262_2845436_-	transcriptional activator RinB	NA	Q4ZBK0	Staphylococcus_phage	100.0	6.4e-22
WP_031913926.1|2845432_2845639_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	85.3	9.6e-25
WP_000120374.1|2845635_2845881_-	hypothetical protein	NA	A9CR89	Staphylococcus_phage	100.0	6.5e-28
WP_031913925.1|2845917_2846451_-	dUTP pyrophosphatase	NA	Q4ZDW8	Staphylococcus_virus	95.5	5.3e-91
WP_031918001.1|2846443_2846692_-	DUF1024 family protein	NA	A7TWB0	Staphylococcus_phage	96.3	1.0e-36
WP_031918002.1|2846684_2847050_-	hypothetical protein	NA	A7YGS3	Staphylococcus_virus	95.9	6.6e-61
WP_107285556.1|2847668_2847875_-	hypothetical protein	NA	B7T0H4	Staphylococcus_virus	98.5	3.9e-34
WP_015994747.1|2847888_2848578_-	N-6 DNA methylase	NA	B7T0H3	Staphylococcus_virus	100.0	6.1e-132
WP_015994746.1|2848574_2848775_-	hypothetical protein	NA	B7T0H2	Staphylococcus_virus	100.0	3.7e-29
WP_015994745.1|2848777_2849035_-	DUF3310 domain-containing protein	NA	B7T0H1	Staphylococcus_virus	100.0	7.5e-43
WP_031775798.1|2849034_2849397_-	phage protein	NA	B7T0B4	Staphylococcus_virus	78.3	2.4e-47
WP_031918003.1|2849408_2849666_-	helix-turn-helix transcriptional regulator	NA	Q9MBR5	Staphylococcus_prophage	98.8	2.7e-40
WP_015980407.1|2849666_2849852_-	DUF3113 family protein	NA	Q9MBR6	Staphylococcus_prophage	100.0	9.2e-27
WP_015980406.1|2849856_2850261_-	DUF1064 domain-containing protein	NA	Q9MBR7	Staphylococcus_prophage	100.0	5.4e-72
WP_107285557.1|2850271_2850493_-	DUF3269 family protein	NA	Q9G021	Staphylococcus_phage	98.6	4.9e-35
WP_031903459.1|2850495_2850711_-	hypothetical protein	NA	A0A0E3XD74	Staphylococcus_phage	98.6	8.2e-35
WP_103147420.1|2850707_2851949_-	AAA family ATPase	NA	C8CGZ3	Staphylococcus_phage	99.3	4.8e-228
WP_031794788.1|2851945_2852302_-	hypothetical protein	NA	M9NS37	Staphylococcus_phage	98.3	5.3e-63
WP_031794789.1|2852301_2853057_-	DnaD domain protein	NA	C8CGZ1	Staphylococcus_phage	92.8	3.3e-131
WP_031584874.1|2853049_2853724_-	hypothetical protein	NA	C8CGZ0	Staphylococcus_phage	98.7	3.4e-127
WP_107285558.1|2853737_2854166_-	single-stranded DNA-binding protein	NA	A0A0E3XC62	Staphylococcus_phage	91.5	1.5e-64
WP_000139720.1|2854165_2854789_-	DUF1071 domain-containing protein	NA	A0A2H4PQQ6	Staphylococcus_phage	100.0	1.4e-114
WP_000815402.1|2854781_2855003_-	DUF2483 family protein	NA	B2ZYV2	Staphylococcus_phage	100.0	3.2e-34
WP_103147422.1|2855012_2855273_-	DUF1108 family protein	NA	A0A0H4IP62	Staphylococcus_phage	95.3	4.9e-42
WP_070045969.1|2855364_2855685_-	hypothetical protein	NA	A0A0K1LL36	Staphylococcus_phage	99.1	1.4e-54
WP_103147423.1|2855685_2855853_-	DUF1270 family protein	NA	Q9MBS6	Staphylococcus_prophage	96.4	3.1e-21
WP_000455728.1|2855866_2856076_-	hypothetical protein	NA	A0A2H4PQR1	Staphylococcus_phage	100.0	9.7e-33
WP_058332268.1|2856088_2856802_-	antirepressor	NA	A0A059T7N7	Staphylococcus_phage	94.9	7.0e-123
WP_000394020.1|2856989_2857193_-	hypothetical protein	NA	A0A0E3XBM9	Staphylococcus_phage	100.0	4.7e-32
WP_000132645.1|2857265_2857478_-	helix-turn-helix domain-containing protein	NA	Q4ZAL9	Staphylococcus_virus	98.6	1.9e-31
WP_001118607.1|2857630_2857945_+	helix-turn-helix transcriptional regulator	NA	Q4ZAM0	Staphylococcus_virus	100.0	5.7e-53
WP_000521395.1|2857966_2858425_+	hypothetical protein	NA	B2ZYU2	Staphylococcus_phage	100.0	1.2e-83
WP_001077638.1|2858445_2858937_+	hypothetical protein	NA	Q4ZBN8	Staphylococcus_phage	100.0	7.5e-84
WP_103147426.1|2858940_2859456_+	hypothetical protein	NA	I1W624	Staphylococcus_phage	95.9	2.2e-33
WP_000146088.1|2859516_2860566_+|integrase	site-specific integrase	integrase	A0A2H4JB53	uncultured_Caudovirales_phage	90.3	5.2e-183
2864850:2864867	attR	TTATTTAATGCTGAAACT	NA	NA	NA	NA
