assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003019295.1_ASM301929v1	NZ_CP028101	Fusobacterium nucleatum subsp. nucleatum strain 25586 chromosome, complete genome	1	3935-4204	1	CRT	no		cas3,WYL,RT,csa3,DEDDh,cas4,DinG,cas2,cas1,cas5,cas7,cas8b2,cas6,PD-DExK	Orphan	ATAGTTCAGCTTTTGGAN	18	0	0	NA	NA	NA	6	6	Orphan	cas3,WYL,RT,csa3,DEDDh,cas4,DinG,cas2,cas1,cas5,cas7,cas8b2,cas6,PD-DExK	NA,NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|288aa|up_2|NZ_CP028101.1_76_940_-	COG1792, MreC, Cell shape-determining protein [Cell envelope biogenesis, outer membrane]	NA|392aa|up_1|NZ_CP028101.1_1103_2279_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|300aa|up_0|NZ_CP028101.1_2702_3602_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|245aa|down_0|NZ_CP028101.1_5282_6017_-	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|261aa|down_1|NZ_CP028101.1_6017_6800_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|268aa|down_2|NZ_CP028101.1_6796_7600_-	TIGR02790, Nickel_transport_system_permease_protein_nikC	NA|310aa|down_3|NZ_CP028101.1_7592_8522_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|535aa|down_4|NZ_CP028101.1_8536_10141_-	cd08489, PBP2_NikA, The substrate-binding component of an ABC-type nickel import system contains the type 2 periplasmic binding fold	NA|154aa|down_5|NZ_CP028101.1_10547_11009_+	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|370aa|down_6|NZ_CP028101.1_11010_12120_+	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|219aa|down_7|NZ_CP028101.1_12311_12968_+	PRK09289, PRK09289, riboflavin synthase	NA|400aa|down_8|NZ_CP028101.1_12977_14177_+	PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|494aa|down_9|NZ_CP028101.1_14356_15838_+	COG3666, COG3666, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_003019295.1_ASM301929v1	NZ_CP028101	Fusobacterium nucleatum subsp. nucleatum strain 25586 chromosome, complete genome	2	812208-812302	1	CRISPRCasFinder	no		cas3,WYL,RT,csa3,DEDDh,cas4,DinG,cas2,cas1,cas5,cas7,cas8b2,cas6,PD-DExK	Orphan	TATGATGAAAGATGATAAAATGATGA	26	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,RT,csa3,DEDDh,cas4,DinG,cas2,cas1,cas5,cas7,cas8b2,cas6,PD-DExK	NA|159aa|up_6|NZ_CP028101.1_804937_805414_-,NA|197aa|up_2|NZ_CP028101.1_808747_809338_-,NA	NA|100aa|up_9|NZ_CP028101.1_802098_802398_+	COG0851, MinE, Septum formation topological specificity factor [Cell division and chromosome partitioning]	NA|327aa|up_8|NZ_CP028101.1_802481_803462_-	PHA03095, PHA03095, ankyrin-like protein; Provisional	NA|485aa|up_7|NZ_CP028101.1_803478_804933_-	sd00045, ANK, ankyrin repeats	NA|159aa|up_6|NZ_CP028101.1_804937_805414_-	NA	NA|115aa|up_5|NZ_CP028101.1_805548_805893_-	COG3862, COG3862, Uncharacterized protein with conserved CXXC pairs [Function unknown]	NA|422aa|up_4|NZ_CP028101.1_805892_807158_-	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|477aa|up_3|NZ_CP028101.1_807169_808600_-	COG0579, COG0579, Predicted dehydrogenase [General function prediction only]	NA|197aa|up_2|NZ_CP028101.1_808747_809338_-	NA	NA|439aa|up_1|NZ_CP028101.1_809358_810675_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|218aa|up_0|NZ_CP028101.1_810994_811648_+	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|295aa|down_0|NZ_CP028101.1_812429_813314_+	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|262aa|down_1|NZ_CP028101.1_813344_814130_+	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|553aa|down_2|NZ_CP028101.1_814116_815775_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|478aa|down_3|NZ_CP028101.1_815893_817327_+	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|516aa|down_4|NZ_CP028101.1_817483_819031_+	cd08520, PBP2_NikA_DppA_OppA_like_21, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|319aa|down_5|NZ_CP028101.1_819027_819984_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|275aa|down_6|NZ_CP028101.1_819980_820805_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|556aa|down_7|NZ_CP028101.1_820801_822469_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|117aa|down_8|NZ_CP028101.1_822458_822809_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|267aa|down_9|NZ_CP028101.1_822805_823606_+	pfam13649, Methyltransf_25, Methyltransferase domain
GCF_003019295.1_ASM301929v1	NZ_CP028101	Fusobacterium nucleatum subsp. nucleatum strain 25586 chromosome, complete genome	3	1403746-1403995	1,2	PILER-CR,CRISPRCasFinder	no	DinG	cas3,WYL,RT,csa3,DEDDh,cas4,DinG,cas2,cas1,cas5,cas7,cas8b2,cas6,PD-DExK	Type IV-A	TCAAGAAAATTATAAAAATGGTGAACTAGATGGA,AATTATAAAGATGGTGAACTAGATGGA	34,27	0	0	NA	NA	NA:NA	2,3	3	Orphan	cas3,WYL,RT,csa3,DEDDh,cas4,DinG,cas2,cas1,cas5,cas7,cas8b2,cas6,PD-DExK	NA|178aa|up_6|NZ_CP028101.1_1395284_1395818_+,NA	NA|252aa|up_9|NZ_CP028101.1_1392999_1393755_-	pfam14025, DUF4241, Protein of unknown function (DUF4241)	NA|229aa|up_8|NZ_CP028101.1_1393918_1394605_+	PRK14115, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA|205aa|up_7|NZ_CP028101.1_1394641_1395256_+	COG0588, GpmA, Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]	NA|178aa|up_6|NZ_CP028101.1_1395284_1395818_+	NA	NA|397aa|up_5|NZ_CP028101.1_1395834_1397025_+	pfam05636, HIGH_NTase1, HIGH Nucleotidyl Transferase	NA|413aa|up_4|NZ_CP028101.1_1397128_1398367_+	PRK05469, PRK05469, tripeptide aminopeptidase PepT	NA|569aa|up_3|NZ_CP028101.1_1398373_1400080_+	TIGR03904, putative_radical_SAM_protein_YgiQ, uncharacterized radical SAM protein YgiQ	NA|603aa|up_2|NZ_CP028101.1_1400275_1402084_+	COG5295, Hia, Autotransporter adhesin [Intracellular trafficking and secretion / Extracellular structures]	NA|252aa|up_1|NZ_CP028101.1_1402172_1402928_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|110aa|up_0|NZ_CP028101.1_1402929_1403259_-	pfam08921, DUF1904, Domain of unknown function (DUF1904)	NA|213aa|down_0|NZ_CP028101.1_1404531_1405170_-	COG3404, COG3404, Methenyl tetrahydrofolate cyclohydrolase [Amino acid transport and metabolism]	NA|414aa|down_1|NZ_CP028101.1_1405187_1406429_-	PRK09356, PRK09356, imidazolonepropionase; Validated	NA|322aa|down_2|NZ_CP028101.1_1406505_1407471_-	COG3643, COG3643, Glutamate formiminotransferase [Amino acid transport and metabolism]	NA|157aa|down_3|NZ_CP028101.1_1407685_1408156_+	COG4807, COG4807, Uncharacterized protein conserved in bacteria [Function unknown]	DinG|821aa|down_4|NZ_CP028101.1_1408177_1410640_+	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|691aa|down_5|NZ_CP028101.1_1410657_1412730_+	COG1480, COG1480, Predicted membrane-associated HD superfamily hydrolase [General function prediction only]	NA|163aa|down_6|NZ_CP028101.1_1412746_1413235_+	pfam02130, UPF0054, Uncharacterized protein family UPF0054	NA|172aa|down_7|NZ_CP028101.1_1413254_1413770_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|450aa|down_8|NZ_CP028101.1_1413766_1415116_-	pfam07613, DUF1576, Protein of unknown function (DUF1576)	NA|415aa|down_9|NZ_CP028101.1_1415227_1416472_-	pfam13645, YkuD_2, L,D-transpeptidase catalytic domain
GCF_003019295.1_ASM301929v1	NZ_CP028101	Fusobacterium nucleatum subsp. nucleatum strain 25586 chromosome, complete genome	4	1843734-1844825	2,3,2	CRT,CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6	cas3,WYL,RT,csa3,DEDDh,cas4,DinG,cas2,cas1,cas5,cas7,cas8b2,cas6,PD-DExK	Unclear	ATTTAAATTCTAATATAGAAATACATAAAT,ATTTAAATTCTAATATAGAAATACATAAAT,ATTTAAATTCTAATATAGAAATACATAAAT	30,30,30	0	0	NA	NA	NA:NA:NA	16,15,14	16	Unclear	cas3,WYL,RT,csa3,DEDDh,cas4,DinG,cas2,cas1,cas5,cas7,cas8b2,cas6,PD-DExK	NA|69aa|up_0|NZ_CP028101.1_1843009_1843216_+,NA	NA|316aa|up_9|NZ_CP028101.1_1829317_1830265_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|342aa|up_8|NZ_CP028101.1_1830461_1831487_+	PRK15395, PRK15395, galactose/glucose ABC transporter substrate-binding protein MglB	NA|501aa|up_7|NZ_CP028101.1_1831576_1833079_+	PRK10982, PRK10982, galactose/methyl galaxtoside transporter ATP-binding protein; Provisional	NA|340aa|up_6|NZ_CP028101.1_1833101_1834121_+	PRK09478, mglC, galactose/methyl galactoside ABC transporter permease MglC	NA|303aa|up_5|NZ_CP028101.1_1834164_1835073_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|319aa|up_4|NZ_CP028101.1_1835093_1836050_-	TIGR01771, L-lactate_dehydrogenase, L-lactate dehydrogenase	NA|1189aa|up_3|NZ_CP028101.1_1836220_1839787_-	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric	NA|399aa|up_2|NZ_CP028101.1_1839878_1841075_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|335aa|up_1|NZ_CP028101.1_1841125_1842130_-	PRK09653, eutD, phosphotransacetylase	NA|69aa|up_0|NZ_CP028101.1_1843009_1843216_+	NA	cas2|107aa|down_0|NZ_CP028101.1_1845019_1845340_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|331aa|down_1|NZ_CP028101.1_1845302_1846295_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|165aa|down_2|NZ_CP028101.1_1846306_1846801_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|813aa|down_3|NZ_CP028101.1_1846843_1849282_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|367aa|down_4|NZ_CP028101.1_1849370_1850471_-	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|301aa|down_5|NZ_CP028101.1_1850483_1851386_-	TIGR01875, CRISPR-associated_protein_Cas7/Cst2/DevR, CRISPR-associated autoregulator DevR family	cas8b2|518aa|down_6|NZ_CP028101.1_1851398_1852952_-	pfam09657, Cas_Csx8, CRISPR-associated protein Csx8 (Cas_Csx8)	cas6|251aa|down_7|NZ_CP028101.1_1852941_1853694_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|300aa|down_8|NZ_CP028101.1_1853721_1854621_-	COG4823, AbiF, Abortive infection bacteriophage resistance protein [Defense mechanisms]	NA|253aa|down_9|NZ_CP028101.1_1855076_1855835_-	cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation
