assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003019275.1_ASM301927v1	NZ_CP027848	Staphylococcus muscae strain ATCC 49910 chromosome, complete genome	1	174424-177065	1	CRT	no		cas3,DEDDh,csa3,DinG,WYL,cas14j	Orphan	TCNGANTCNGANTCNCTNTCAGAATCNGANTC	32	0	0	NA	NA	NA	33	33	Orphan	cas3,DEDDh,csa3,DinG,WYL,cas14j	NA,NA	NA|233aa|up_9|NZ_CP027848.1_164115_164814_+	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	NA|203aa|up_8|NZ_CP027848.1_164807_165416_+	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|147aa|up_7|NZ_CP027848.1_165528_165969_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|up_6|NZ_CP027848.1_165965_166790_+	cd07729, AHL_lactonase_MBL-fold, quorum-quenching N-acyl-homoserine lactonase, MBL-fold metallo-hydrolase domain	NA|138aa|up_5|NZ_CP027848.1_166982_167396_-	pfam06983, 3-dmu-9_3-mt, 3-demethylubiquinone-9 3-methyltransferase	NA|569aa|up_4|NZ_CP027848.1_167583_169290_-	pfam05833, FbpA, Fibronectin-binding protein A N-terminus (FbpA)	NA|208aa|up_3|NZ_CP027848.1_169576_170200_+	PRK00300, gmk, guanylate kinase; Provisional	NA|70aa|up_2|NZ_CP027848.1_170199_170409_+	COG1758, RpoZ, DNA-directed RNA polymerase, subunit K/omega [Transcription]	NA|402aa|up_1|NZ_CP027848.1_170531_171737_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|803aa|up_0|NZ_CP027848.1_171733_174142_+	COG1198, PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]	NA|163aa|down_0|NZ_CP027848.1_184078_184567_+	PRK14595, PRK14595, peptide deformylase; Provisional	NA|312aa|down_1|NZ_CP027848.1_184559_185495_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed	NA|435aa|down_2|NZ_CP027848.1_185491_186796_+	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA|365aa|down_3|NZ_CP027848.1_186797_187892_+	PRK14455, PRK14455, ribosomal RNA large subunit methyltransferase N; Provisional	NA|248aa|down_4|NZ_CP027848.1_187898_188642_+	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|691aa|down_5|NZ_CP027848.1_188638_190711_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|306aa|down_6|NZ_CP027848.1_190776_191694_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|292aa|down_7|NZ_CP027848.1_191997_192873_+	PRK00098, PRK00098, GTPase RsgA; Reviewed	NA|219aa|down_8|NZ_CP027848.1_192872_193529_+	PRK05581, PRK05581, ribulose-phosphate 3-epimerase; Validated	NA|215aa|down_9|NZ_CP027848.1_193528_194173_+	cd07995, TPK, Thiamine pyrophosphokinase
GCF_003019275.1_ASM301927v1	NZ_CP027848	Staphylococcus muscae strain ATCC 49910 chromosome, complete genome	2	688638-689068	1,2	CRISPRCasFinder,CRT	no		cas3,DEDDh,csa3,DinG,WYL,cas14j	Orphan	GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC,GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC	36,36	0	0	NA	NA	NA:NA	6,6	6	Orphan	cas3,DEDDh,csa3,DinG,WYL,cas14j	NA,NA|29aa|down_5|NZ_CP027848.1_698293_698380_-	NA|154aa|up_9|NZ_CP027848.1_678355_678817_+	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms]	NA|201aa|up_8|NZ_CP027848.1_679034_679637_+	PRK05327, rpsD, 30S ribosomal protein S4; Validated	NA|319aa|up_7|NZ_CP027848.1_679804_680761_+	PRK08618, PRK08618, ornithine cyclodeaminase family protein	NA|248aa|up_6|NZ_CP027848.1_680899_681643_-	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins	NA|151aa|up_5|NZ_CP027848.1_681715_682168_+	TIGR03563, perox_SACOL1771, peroxiredoxin, SACOL1771 subfamily	NA|387aa|up_4|NZ_CP027848.1_682349_683510_+	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]	NA|536aa|up_3|NZ_CP027848.1_683499_685107_+	PRK13581, PRK13581, D-3-phosphoglycerate dehydrogenase; Provisional	NA|375aa|up_2|NZ_CP027848.1_685159_686284_-	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|206aa|up_1|NZ_CP027848.1_686422_687040_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|404aa|up_0|NZ_CP027848.1_687194_688406_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|421aa|down_0|NZ_CP027848.1_689330_690593_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|298aa|down_1|NZ_CP027848.1_690946_691840_+	pfam00912, Transgly, Transglycosylase	NA|271aa|down_2|NZ_CP027848.1_694480_695293_-	cd02605, HAD_SPP, sucrose-phosphatase, similar to Synechocystis sp PCC 6803 SPP	NA|417aa|down_3|NZ_CP027848.1_695277_696528_-	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|185aa|down_4|NZ_CP027848.1_697564_698119_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|29aa|down_5|NZ_CP027848.1_698293_698380_-	NA	NA|150aa|down_6|NZ_CP027848.1_698618_699068_+	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|133aa|down_7|NZ_CP027848.1_699136_699535_-	PRK06217, PRK06217, hypothetical protein; Validated	NA|556aa|down_8|NZ_CP027848.1_700002_701670_-	PRK13505, PRK13505, formate--tetrahydrofolate ligase; Provisional	NA|330aa|down_9|NZ_CP027848.1_701917_702907_-	TIGR01481, catabolite_control_protein_A, catabolite control protein A
GCF_003019275.1_ASM301927v1	NZ_CP027848	Staphylococcus muscae strain ATCC 49910 chromosome, complete genome	3	756942-757109	2,1	CRISPRCasFinder,PILER-CR	no		cas3,DEDDh,csa3,DinG,WYL,cas14j	Orphan	GTTTCACTTATACCTAAAATTACAGAGTACTAAAAC,GTTTCACTTATACCTAAAATTACAGAGTACTAAAACA	36,37	2	2	757044-757073|757066-757091	NZ_CP027848.1_1955035-1955064|NZ_CP027848.1_1955039-1955064	NA:NA	2,2	2	Orphan	cas3,DEDDh,csa3,DinG,WYL,cas14j	NA|304aa|up_9|NZ_CP027848.1_747054_747966_-,NA|60aa|down_0|NZ_CP027848.1_757336_757516_-,NA|175aa|down_7|NZ_CP027848.1_764545_765070_+	NA|304aa|up_9|NZ_CP027848.1_747054_747966_-	NA	NA|401aa|up_8|NZ_CP027848.1_748019_749222_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|527aa|up_7|NZ_CP027848.1_749698_751279_+	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase	NA|257aa|up_6|NZ_CP027848.1_751361_752132_-	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|157aa|up_5|NZ_CP027848.1_752112_752583_-	TIGR02705, conserved_hypothetical_protein, nucleoside triphosphatase YtkD	NA|79aa|up_4|NZ_CP027848.1_752644_752881_+	pfam01809, Haemolytic, Haemolytic domain	NA|331aa|up_3|NZ_CP027848.1_752871_753864_-	TIGR01928, o-succinylbenzoate_synthase, o-succinylbenzoate synthase	NA|468aa|up_2|NZ_CP027848.1_753866_755270_-	cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE)	NA|193aa|up_1|NZ_CP027848.1_755662_756241_+	pfam07553, Lipoprotein_Ltp, Host cell surface-exposed lipoprotein	NA|62aa|up_0|NZ_CP027848.1_756511_756697_-	COG3093, VapI, Plasmid maintenance system antidote protein [General function prediction only]	NA|60aa|down_0|NZ_CP027848.1_757336_757516_-	NA	NA|118aa|down_1|NZ_CP027848.1_757765_758119_+	pfam13108, DUF3969, Protein of unknown function (DUF3969)	NA|67aa|down_2|NZ_CP027848.1_758593_758794_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|191aa|down_3|NZ_CP027848.1_759985_760558_-	COG3545, COG3545, Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]	NA|468aa|down_4|NZ_CP027848.1_760741_762145_-	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed	NA|310aa|down_5|NZ_CP027848.1_762160_763090_-	PRK12435, PRK12435, ferrochelatase; Provisional	NA|347aa|down_6|NZ_CP027848.1_763124_764165_-	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|175aa|down_7|NZ_CP027848.1_764545_765070_+	NA	NA|404aa|down_8|NZ_CP027848.1_765122_766334_-	pfam05975, EcsB, Bacterial ABC transporter protein EcsB	NA|245aa|down_9|NZ_CP027848.1_766333_767068_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]
