assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003019035.1_ASM301903v1	NZ_CP027447	Escherichia coli strain 2014C-3075 chromosome, complete genome	1	2336395-2337094	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	11,11,11	11	TypeI-E	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,WYL	NA,NA	NA|254aa|up_9|NZ_CP027447.1_2328206_2328968_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP027447.1_2328948_2329998_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP027447.1_2329994_2330474_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP027447.1_2330473_2331184_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP027447.1_2331202_2331514_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP027447.1_2331707_2332031_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP027447.1_2332080_2332686_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP027447.1_2332685_2334113_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP027447.1_2334114_2335023_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP027447.1_2335275_2336313_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP027447.1_2337190_2337484_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_1|NZ_CP027447.1_2337480_2338404_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP027447.1_2338400_2339051_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP027447.1_2339032_2339779_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP027447.1_2339789_2340845_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_5|NZ_CP027447.1_2340859_2341396_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|521aa|down_6|NZ_CP027447.1_2341392_2342955_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|NZ_CP027447.1_2343044_2345744_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_8|NZ_CP027447.1_2345938_2346091_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_9|NZ_CP027447.1_2346355_2347090_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_003019035.1_ASM301903v1	NZ_CP027447	Escherichia coli strain 2014C-3075 chromosome, complete genome	2	2362787-2363064	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Unclear	CGGTTTATCCCCGCTGACGTGGGGAACTC,CGGTTTATCCCCGCTGNCGNGGGGAACTC,GACGGTTTATCCCCGCTGACGTGGGGAACTCGCTAA	29,29,36	0	0	NA	NA	I-E:I-E:I-E	4,4,2	4	Unclear	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,WYL	NA,NA	NA|424aa|up_9|NZ_CP027447.1_2351433_2352705_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NZ_CP027447.1_2352695_2352956_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NZ_CP027447.1_2352972_2353548_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NZ_CP027447.1_2353695_2354556_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP027447.1_2354552_2355332_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_4|NZ_CP027447.1_2355309_2356647_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP027447.1_2356740_2358195_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP027447.1_2358264_2359050_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP027447.1_2359366_2360644_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP027447.1_2360670_2362149_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP027447.1_2363397_2364069_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|201aa|down_1|NZ_CP027447.1_2364241_2364844_+	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|298aa|down_2|NZ_CP027447.1_2364857_2365751_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|down_3|NZ_CP027447.1_2365765_2366914_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|291aa|down_4|NZ_CP027447.1_2366919_2367792_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_5|NZ_CP027447.1_2367851_2369150_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_6|NZ_CP027447.1_2369236_2370874_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_7|NZ_CP027447.1_2371101_2371893_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_8|NZ_CP027447.1_2371964_2372300_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_9|NZ_CP027447.1_2372299_2372548_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE
GCF_003019035.1_ASM301903v1	NZ_CP027447	Escherichia coli strain 2014C-3075 chromosome, complete genome	3	4721630-4721766	3	CRISPRCasFinder	no		DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Orphan	TGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCA	44	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,WYL	NA,NA|272aa|down_8|NZ_CP027447.1_4730931_4731747_+,NA|82aa|down_9|NZ_CP027447.1_4732160_4732406_+	NA|491aa|up_9|NZ_CP027447.1_4709085_4710558_-	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional	NA|196aa|up_8|NZ_CP027447.1_4710571_4711159_-	PRK00767, PRK00767, transcriptional regulator BetI; Validated	NA|678aa|up_7|NZ_CP027447.1_4711287_4713321_+	PRK09928, PRK09928, choline transport protein BetT; Provisional	NA|363aa|up_6|NZ_CP027447.1_4714196_4715285_+	smart00052, EAL, Putative diguanylate phosphodiesterase	NA|311aa|up_5|NZ_CP027447.1_4715326_4716259_-	PRK10094, PRK10094, HTH-type transcriptional activator AllS	NA|166aa|up_4|NZ_CP027447.1_4716350_4716848_-	pfam06496, DUF1097, Protein of unknown function (DUF1097)	NA|202aa|up_3|NZ_CP027447.1_4717105_4717711_+	sd00045, ANK, ankyrin repeats	NA|288aa|up_2|NZ_CP027447.1_4717750_4718614_+	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|516aa|up_1|NZ_CP027447.1_4718603_4720151_+	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|473aa|up_0|NZ_CP027447.1_4720150_4721569_+	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|317aa|down_0|NZ_CP027447.1_4721815_4722766_+	PRK12352, PRK12352, putative carbamate kinase; Reviewed	NA|461aa|down_1|NZ_CP027447.1_4722775_4724158_+	PRK06846, PRK06846, putative deaminase; Validated	NA|137aa|down_2|NZ_CP027447.1_4724455_4724866_+	COG4405, COG4405, Uncharacterized protein conserved in bacteria [Function unknown]	NA|329aa|down_3|NZ_CP027447.1_4725116_4726103_+	cd20002, PBP1_LsrB_Quorum_Sensing-like, ligand-binding protein LsrB-like of ABC transporter periplasmic binding protein	NA|495aa|down_4|NZ_CP027447.1_4726151_4727636_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|324aa|down_5|NZ_CP027447.1_4727628_4728600_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|319aa|down_6|NZ_CP027447.1_4728596_4729553_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|350aa|down_7|NZ_CP027447.1_4729639_4730689_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|272aa|down_8|NZ_CP027447.1_4730931_4731747_+	NA	NA|82aa|down_9|NZ_CP027447.1_4732160_4732406_+	NA
