assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003018995.1_ASM301899v1	NZ_CP027362	Escherichia coli strain 95-3192 chromosome, complete genome	1	893531-893622	1	CRISPRCasFinder	no		cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	NA|70aa|up_8|NZ_CP027362.1_882782_882992_-,NA|422aa|down_1|NZ_CP027362.1_903054_904320_-,NA|149aa|down_3|NZ_CP027362.1_904591_905038_-,NA|219aa|down_4|NZ_CP027362.1_905040_905697_-,NA|134aa|down_5|NZ_CP027362.1_905790_906192_-,NA|206aa|down_8|NZ_CP027362.1_907446_908064_-,NA|93aa|down_9|NZ_CP027362.1_908069_908348_-	NA|503aa|up_9|NZ_CP027362.1_881115_882624_-	PRK15419, PRK15419, sodium/proline symporter PutP	NA|70aa|up_8|NZ_CP027362.1_882782_882992_-	NA	NA|1321aa|up_7|NZ_CP027362.1_883046_887009_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_6|NZ_CP027362.1_887048_887687_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|231aa|up_5|NZ_CP027362.1_889064_889757_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP027362.1_889768_890155_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP027362.1_890162_890963_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP027362.1_890972_891563_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP027362.1_891573_892068_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP027362.1_892088_893417_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|2794aa|down_0|NZ_CP027362.1_894604_902986_-	pfam18799, LPD5, Large polyvalent protein-associated domain 5	NA|422aa|down_1|NZ_CP027362.1_903054_904320_-	NA	NA|84aa|down_2|NZ_CP027362.1_904330_904582_-	TIGR03789, pdsO, proteobacterial sortase system peptidoglycan-associated protein	NA|149aa|down_3|NZ_CP027362.1_904591_905038_-	NA	NA|219aa|down_4|NZ_CP027362.1_905040_905697_-	NA	NA|134aa|down_5|NZ_CP027362.1_905790_906192_-	NA	NA|47aa|down_6|NZ_CP027362.1_906248_906389_-	PRK09759, PRK09759, type I toxin-antitoxin system toxin HokA	NA|245aa|down_7|NZ_CP027362.1_906621_907356_-	pfam06316, Ail_Lom, Enterobacterial Ail/Lom protein	NA|206aa|down_8|NZ_CP027362.1_907446_908064_-	NA	NA|93aa|down_9|NZ_CP027362.1_908069_908348_-	NA
GCF_003018995.1_ASM301899v1	NZ_CP027362	Escherichia coli strain 95-3192 chromosome, complete genome	2	1398592-1398723	2	CRISPRCasFinder	no		cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	Orphan	CTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	44	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	NA,NA	NA|891aa|up_9|NZ_CP027362.1_1372087_1374760_+	PRK10618, PRK10618, phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional	NA|217aa|up_8|NZ_CP027362.1_1374776_1375427_+	PRK10840, PRK10840, transcriptional regulator RcsB; Provisional	NA|950aa|up_7|NZ_CP027362.1_1375626_1378476_-	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC	NA|259aa|up_6|NZ_CP027362.1_1378750_1379527_-	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|up_5|NZ_CP027362.1_1385718_1386342_-	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|563aa|up_4|NZ_CP027362.1_1386338_1388027_-	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|876aa|up_3|NZ_CP027362.1_1388175_1390803_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|241aa|up_2|NZ_CP027362.1_1390949_1391672_+	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|1251aa|up_1|NZ_CP027362.1_1391812_1395565_-	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|762aa|up_0|NZ_CP027362.1_1396260_1398546_+	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|377aa|down_0|NZ_CP027362.1_1398779_1399910_+	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|85aa|down_1|NZ_CP027362.1_1399909_1400164_+	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|217aa|down_2|NZ_CP027362.1_1400217_1400868_-	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|397aa|down_3|NZ_CP027362.1_1400948_1402139_-	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|293aa|down_4|NZ_CP027362.1_1402303_1403182_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|360aa|down_5|NZ_CP027362.1_1403226_1404306_-	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|453aa|down_6|NZ_CP027362.1_1404310_1405669_-	PRK11273, glpT, glycerol-3-phosphate transporter	NA|543aa|down_7|NZ_CP027362.1_1405941_1407570_+	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|420aa|down_8|NZ_CP027362.1_1407559_1408819_+	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|397aa|down_9|NZ_CP027362.1_1408815_1410006_+	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit
GCF_003018995.1_ASM301899v1	NZ_CP027362	Escherichia coli strain 95-3192 chromosome, complete genome	3	1479924-1480049	3	CRISPRCasFinder	no		cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	Orphan	TGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC	35	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	NA,NA	NA|298aa|up_9|NZ_CP027362.1_1470704_1471598_+	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|297aa|up_8|NZ_CP027362.1_1471645_1472536_-	PRK09857, PRK09857, recombination-promoting nuclease RpnA	NA|258aa|up_7|NZ_CP027362.1_1472732_1473506_-	PRK10619, PRK10619, histidine ABC transporter ATP-binding protein HisP	NA|239aa|up_6|NZ_CP027362.1_1473513_1474230_-	PRK15069, PRK15069, histidine ABC transporter permease HisM	NA|229aa|up_5|NZ_CP027362.1_1474226_1474913_-	PRK15135, PRK15135, histidine ABC transporter permease HisQ	NA|261aa|up_4|NZ_CP027362.1_1475002_1475785_-	PRK15437, PRK15437, histidine ABC transporter substrate-binding protein HisJ; Provisional	NA|261aa|up_3|NZ_CP027362.1_1476005_1476788_-	PRK15010, PRK15010, lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT	NA|190aa|up_2|NZ_CP027362.1_1477052_1477622_-	PRK06029, PRK06029, UbiX family flavin prenyltransferase	NA|506aa|up_1|NZ_CP027362.1_1477716_1479234_-	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional	NA|163aa|up_0|NZ_CP027362.1_1479270_1479759_-	PRK10845, PRK10845, colicin V production protein; Provisional	NA|221aa|down_0|NZ_CP027362.1_1480108_1480771_-	PRK11633, PRK11633, cell division protein DedD; Provisional	NA|423aa|down_1|NZ_CP027362.1_1480760_1482029_-	PRK10846, PRK10846, bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional	NA|305aa|down_2|NZ_CP027362.1_1482098_1483013_-	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|220aa|down_3|NZ_CP027362.1_1483168_1483828_-	PRK10847, PRK10847, DedA family protein	NA|271aa|down_4|NZ_CP027362.1_1483910_1484723_-	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|338aa|down_5|NZ_CP027362.1_1484722_1485736_-	PRK08040, PRK08040, putative semialdehyde dehydrogenase; Provisional	NA|379aa|down_6|NZ_CP027362.1_1485801_1486938_-	PRK15438, PRK15438, erythronate-4-phosphate dehydrogenase PdxB; Provisional	NA|393aa|down_7|NZ_CP027362.1_1488027_1489206_-	PRK12382, PRK12382, putative transporter; Provisional	NA|407aa|down_8|NZ_CP027362.1_1489480_1490701_-	PRK07967, PRK07967, beta-ketoacyl-ACP synthase I	NA|669aa|down_9|NZ_CP027362.1_1490859_1492866_+	PRK01747, mnmC, bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
GCF_003018995.1_ASM301899v1	NZ_CP027362	Escherichia coli strain 95-3192 chromosome, complete genome	4	1702231-1702354	4	CRISPRCasFinder	no		cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	Orphan	TGTCGGATGCGGCGTGAACGCCATATCCGACCT	33	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	NA,NA	NA|259aa|up_9|NZ_CP027362.1_1694011_1694788_-	PRK11611, PRK11611, enhanced serine sensitivity protein SseB; Provisional	NA|428aa|up_8|NZ_CP027362.1_1694930_1696214_-	PRK05015, PRK05015, aminopeptidase B; Provisional	NA|67aa|up_7|NZ_CP027362.1_1696458_1696659_-	PRK10721, PRK10721, hypothetical protein; Provisional	NA|112aa|up_6|NZ_CP027362.1_1696670_1697006_-	TIGR02007, 2Fe-2S_ferredoxin, ferredoxin, 2Fe-2S type, ISC system	NA|617aa|up_5|NZ_CP027362.1_1697007_1698858_-	PRK05183, hscA, chaperone protein HscA; Provisional	NA|172aa|up_4|NZ_CP027362.1_1698874_1699390_-	PRK05014, hscB, co-chaperone HscB; Provisional	NA|108aa|up_3|NZ_CP027362.1_1699485_1699809_-	PRK09502, iscA, iron-sulfur cluster assembly protein IscA	NA|129aa|up_2|NZ_CP027362.1_1699825_1700212_-	PRK11325, PRK11325, scaffold protein; Provisional	NA|405aa|up_1|NZ_CP027362.1_1700239_1701454_-	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|163aa|up_0|NZ_CP027362.1_1701565_1702054_-	PRK10857, PRK10857, Fe-S cluster assembly transcriptional regulator IscR	NA|247aa|down_0|NZ_CP027362.1_1702414_1703155_-	PRK15114, PRK15114, tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ; Provisional	NA|268aa|down_1|NZ_CP027362.1_1703273_1704077_+	PRK10757, PRK10757, inositol-1-monophosphatase	NA|285aa|down_2|NZ_CP027362.1_1704221_1705076_+	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]	NA|427aa|down_3|NZ_CP027362.1_1705266_1706547_+	PRK11564, PRK11564, stationary phase inducible protein CsiE; Provisional	NA|297aa|down_4|NZ_CP027362.1_1707836_1708727_-	PRK09906, PRK09906, DNA-binding transcriptional regulator HcaR; Provisional	NA|454aa|down_5|NZ_CP027362.1_1708862_1710224_+	cd08881, RHO_alpha_C_NDO-like, C-terminal catalytic domain of the oxygenase alpha subunit of naphthalene 1,2-dioxygenase (NDO) and related aromatic ring hydroxylating dioxygenases	NA|173aa|down_6|NZ_CP027362.1_1710220_1710739_+	PRK10069, PRK10069, 3-phenylpropionate/cinnamic acid dioxygenase subunit beta	NA|107aa|down_7|NZ_CP027362.1_1710738_1711059_+	PRK09965, PRK09965, 3-phenylpropionate dioxygenase ferredoxin subunit; Provisional	NA|328aa|down_8|NZ_CP027362.1_1713002_1713986_-	cd06317, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems	NA|1094aa|down_9|NZ_CP027362.1_1714082_1717364_-	pfam17128, DUF5107, Domain of unknown function (DUF5107)
GCF_003018995.1_ASM301899v1	NZ_CP027362	Escherichia coli strain 95-3192 chromosome, complete genome	5	1904025-1904480	5,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	7,7,6	7	TypeI-E	cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	NA,NA	NA|254aa|up_9|NZ_CP027362.1_1895898_1896660_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP027362.1_1896640_1897690_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP027362.1_1897686_1898166_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP027362.1_1898165_1898876_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP027362.1_1898894_1899206_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP027362.1_1899399_1899723_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP027362.1_1899772_1900378_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP027362.1_1900377_1901805_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP027362.1_1901806_1902715_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP027362.1_1902966_1904004_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|95aa|down_0|NZ_CP027362.1_1904585_1904870_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|306aa|down_1|NZ_CP027362.1_1904871_1905789_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|200aa|down_2|NZ_CP027362.1_1905804_1906404_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|225aa|down_3|NZ_CP027362.1_1906390_1907065_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|356aa|down_4|NZ_CP027362.1_1907091_1908159_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|161aa|down_5|NZ_CP027362.1_1908171_1908654_-	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|503aa|down_6|NZ_CP027362.1_1908646_1910155_-	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cas3|889aa|down_7|NZ_CP027362.1_1910569_1913236_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|245aa|down_8|NZ_CP027362.1_1913594_1914329_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_9|NZ_CP027362.1_1914402_1916115_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
GCF_003018995.1_ASM301899v1	NZ_CP027362	Escherichia coli strain 95-3192 chromosome, complete genome	6	1929965-1930236	6,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	Unclear	GCGGTTTATCCCCGCTGGCGCGGGGAACTC,GGTTTATCCCCGCTGGCGCGGGGAACTC,TCGCGGTTTATCCCCGCTGGCGCGGGGAACTC	30,28,32	0	0	NA	NA	I-E:I-E:I-E	4,4,2	4	Unclear	cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	NA,NA	NA|424aa|up_9|NZ_CP027362.1_1918672_1919944_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NZ_CP027362.1_1919934_1920195_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NZ_CP027362.1_1920211_1920787_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NZ_CP027362.1_1920933_1921794_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP027362.1_1921790_1922570_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_4|NZ_CP027362.1_1922547_1923885_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP027362.1_1923978_1925433_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP027362.1_1925502_1926288_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP027362.1_1926606_1927884_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP027362.1_1927910_1929389_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP027362.1_1930574_1931246_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|201aa|down_1|NZ_CP027362.1_1931418_1932021_+	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|298aa|down_2|NZ_CP027362.1_1932034_1932928_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|down_3|NZ_CP027362.1_1932942_1934091_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|301aa|down_4|NZ_CP027362.1_1934087_1934990_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_5|NZ_CP027362.1_1935049_1936348_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_6|NZ_CP027362.1_1936435_1938073_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_7|NZ_CP027362.1_1938300_1939092_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_8|NZ_CP027362.1_1939162_1939498_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_9|NZ_CP027362.1_1939497_1939746_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE
GCF_003018995.1_ASM301899v1	NZ_CP027362	Escherichia coli strain 95-3192 chromosome, complete genome	7	3691174-3691323	7	CRISPRCasFinder	no		cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	Orphan	CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	54	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	NA|556aa|up_6|NZ_CP027362.1_3682407_3684075_+,NA|679aa|down_4|NZ_CP027362.1_3699100_3701137_+	NA|238aa|up_9|NZ_CP027362.1_3680310_3681024_-	PRK12742, PRK12742, SDR family oxidoreductase	NA|198aa|up_8|NZ_CP027362.1_3681094_3681688_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|151aa|up_7|NZ_CP027362.1_3681832_3682285_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|556aa|up_6|NZ_CP027362.1_3682407_3684075_+	NA	NA|335aa|up_5|NZ_CP027362.1_3684131_3685136_-	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|139aa|up_4|NZ_CP027362.1_3685297_3685714_+	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|168aa|up_3|NZ_CP027362.1_3685759_3686263_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|399aa|up_2|NZ_CP027362.1_3686455_3687652_+	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|952aa|up_1|NZ_CP027362.1_3687707_3690563_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|148aa|up_0|NZ_CP027362.1_3690562_3691006_-	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|504aa|down_0|NZ_CP027362.1_3691359_3692871_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|367aa|down_1|NZ_CP027362.1_3693137_3694238_+	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|361aa|down_2|NZ_CP027362.1_3694237_3695320_+	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|340aa|down_3|NZ_CP027362.1_3697111_3698131_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|679aa|down_4|NZ_CP027362.1_3699100_3701137_+	NA	NA|60aa|down_5|NZ_CP027362.1_3701535_3701715_-	COG4930, COG4930, Predicted ATP-dependent Lon-type protease [Posttranslational modification, protein turnover, chaperones]	NA|291aa|down_6|NZ_CP027362.1_3701759_3702632_-	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms]	NA|103aa|down_7|NZ_CP027362.1_3702618_3702927_-	COG3055, COG3055, Uncharacterized protein conserved in bacteria [Function unknown]	NA|368aa|down_8|NZ_CP027362.1_3703171_3704275_-	COG1403, McrA, Restriction endonuclease [Defense mechanisms]	NA|236aa|down_9|NZ_CP027362.1_3704278_3704986_-	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
GCF_003018995.1_ASM301899v1	NZ_CP027362	Escherichia coli strain 95-3192 chromosome, complete genome	8	5152436-5152585	8	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	Unclear	TACCAGAGATAGCGAACCGTAGGTCGGAAAAGGCGCTCGCGCCGCATCCGACA	53	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	NA|22aa|up_2|NZ_CP027362.1_5150523_5150589_+,NA	NA|273aa|up_9|NZ_CP027362.1_5144490_5145309_-	PRK10302, PRK10302, hypothetical protein; Provisional	NA|189aa|up_8|NZ_CP027362.1_5145305_5145872_-	PRK11440, PRK11440, putative hydrolase; Provisional	NA|591aa|up_7|NZ_CP027362.1_5146181_5147954_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|151aa|up_6|NZ_CP027362.1_5148071_5148524_+	PRK09438, nudB, dihydroneopterin triphosphate pyrophosphatase; Provisional	NA|247aa|up_5|NZ_CP027362.1_5148552_5149293_+	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|174aa|up_4|NZ_CP027362.1_5149327_5149849_+	TIGR00228, Crossover_junction_endodeoxyribonuclease_RuvC, crossover junction endodeoxyribonuclease RuvC	NA|201aa|up_3|NZ_CP027362.1_5149850_5150453_-	PRK11470, PRK11470, YebB family permuted papain-like enzyme	NA|22aa|up_2|NZ_CP027362.1_5150523_5150589_+	NA	NA|204aa|up_1|NZ_CP027362.1_5150727_5151339_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|337aa|up_0|NZ_CP027362.1_5151347_5152358_+	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|262aa|down_0|NZ_CP027362.1_5152603_5153389_-	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB	NA|252aa|down_1|NZ_CP027362.1_5153385_5154141_-	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed	NA|311aa|down_2|NZ_CP027362.1_5154219_5155152_+	PRK09545, znuA, zinc ABC transporter substrate-binding protein ZnuA	NA|324aa|down_3|NZ_CP027362.1_5156608_5157580_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|481aa|down_4|NZ_CP027362.1_5157710_5159153_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|290aa|down_5|NZ_CP027362.1_5159280_5160150_-	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional	NA|492aa|down_6|NZ_CP027362.1_5160487_5161963_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|604aa|down_7|NZ_CP027362.1_5162197_5164009_+	PRK09054, PRK09054, phosphogluconate dehydratase; Validated	NA|214aa|down_8|NZ_CP027362.1_5164045_5164687_+	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional	NA|393aa|down_9|NZ_CP027362.1_5164742_5165921_-	PRK09288, purT, formate-dependent phosphoribosylglycinamide formyltransferase
GCF_003018995.1_ASM301899v1	NZ_CP027362	Escherichia coli strain 95-3192 chromosome, complete genome	9	5351053-5351176	9	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,DinG	NA,NA|30aa|down_7|NZ_CP027362.1_5360072_5360162_+	NA|471aa|up_9|NZ_CP027362.1_5340506_5341919_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP027362.1_5342475_5342685_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP027362.1_5343140_5343767_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP027362.1_5343787_5345890_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP027362.1_5345893_5346541_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP027362.1_5346604_5347273_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP027362.1_5347269_5348055_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP027362.1_5348058_5348871_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP027362.1_5348882_5350487_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP027362.1_5350612_5350918_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP027362.1_5351490_5352747_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP027362.1_5352787_5354161_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP027362.1_5354375_5355017_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP027362.1_5355056_5356205_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP027362.1_5356495_5357707_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP027362.1_5357819_5358752_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP027362.1_5358748_5359774_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP027362.1_5360072_5360162_+	NA	NA|390aa|down_8|NZ_CP027362.1_5360327_5361497_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP027362.1_5361642_5362224_-	PRK10543, PRK10543, superoxide dismutase [Fe]
