assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003018815.1_ASM301881v1	NZ_CP027355	Escherichia coli strain 2013C-4991 chromosome, complete genome	1	93659-93776	1	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|62aa|up_9|NZ_CP027355.1_82944_83130_-	PRK09956, PRK09956, ISNCY family transposase	NA|300aa|up_8|NZ_CP027355.1_83142_84042_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|NZ_CP027355.1_84234_85425_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|NZ_CP027355.1_85421_86681_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|NZ_CP027355.1_86670_88299_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_4|NZ_CP027355.1_88571_89930_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|NZ_CP027355.1_89934_91011_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|NZ_CP027355.1_91473_92124_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP027355.1_92177_92432_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP027355.1_92431_93562_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP027355.1_93795_96081_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP027355.1_96776_100529_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP027355.1_100656_101379_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP027355.1_101525_104153_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP027355.1_104301_105990_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP027355.1_105986_106610_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP027355.1_106753_111148_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|NZ_CP027355.1_111148_112798_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|NZ_CP027355.1_112802_113579_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|NZ_CP027355.1_113652_114837_-	PRK05790, PRK05790, putative acyltransferase; Provisional
GCF_003018815.1_ASM301881v1	NZ_CP027355	Escherichia coli strain 2013C-4991 chromosome, complete genome	2	852694-852817	2	CRISPRCasFinder	no	DEDDh	DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|30aa|down_7|NZ_CP027355.1_861713_861803_+	NA|471aa|up_9|NZ_CP027355.1_842147_843560_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP027355.1_844116_844326_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP027355.1_844781_845408_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP027355.1_845428_847531_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP027355.1_847534_848182_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP027355.1_848245_848914_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP027355.1_848910_849696_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP027355.1_849699_850512_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP027355.1_850523_852128_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP027355.1_852253_852559_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP027355.1_853131_854388_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP027355.1_854428_855802_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP027355.1_856016_856658_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP027355.1_856697_857846_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP027355.1_858136_859348_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP027355.1_859460_860393_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP027355.1_860389_861415_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP027355.1_861713_861803_+	NA	NA|390aa|down_8|NZ_CP027355.1_861968_863138_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP027355.1_863372_863954_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_003018815.1_ASM301881v1	NZ_CP027355	Escherichia coli strain 2013C-4991 chromosome, complete genome	3	1775362-1775453	3	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|70aa|up_9|NZ_CP027355.1_1764437_1764647_-,NA	NA|70aa|up_9|NZ_CP027355.1_1764437_1764647_-	NA	NA|1321aa|up_8|NZ_CP027355.1_1764701_1768664_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP027355.1_1768703_1769342_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP027355.1_1769629_1770721_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP027355.1_1770720_1771413_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP027355.1_1771424_1771811_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP027355.1_1771818_1772619_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP027355.1_1772628_1773219_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP027355.1_1773229_1773724_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP027355.1_1773744_1775073_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP027355.1_1775876_1776473_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP027355.1_1776493_1776721_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP027355.1_1776758_1778000_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|307aa|down_3|NZ_CP027355.1_1779808_1780729_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_4|NZ_CP027355.1_1780728_1781034_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_5|NZ_CP027355.1_1781185_1781785_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_6|NZ_CP027355.1_1781781_1784328_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_7|NZ_CP027355.1_1784327_1785500_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_8|NZ_CP027355.1_1785629_1786322_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|343aa|down_9|NZ_CP027355.1_1786294_1787323_-	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional
GCF_003018815.1_ASM301881v1	NZ_CP027355	Escherichia coli strain 2013C-4991 chromosome, complete genome	4	2139990-2140134	4	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|251aa|up_7|NZ_CP027355.1_2134681_2135434_+,NA|72aa|up_6|NZ_CP027355.1_2135441_2135657_+,NA|201aa|up_4|NZ_CP027355.1_2136187_2136790_-,NA|56aa|up_3|NZ_CP027355.1_2137032_2137200_+,NA	NA|227aa|up_9|NZ_CP027355.1_2133849_2134530_+	pfam09588, YqaJ, YqaJ-like viral recombinase domain	NA|53aa|up_8|NZ_CP027355.1_2134526_2134685_+	pfam07026, DUF1317, Protein of unknown function (DUF1317)	NA|251aa|up_7|NZ_CP027355.1_2134681_2135434_+	NA	NA|72aa|up_6|NZ_CP027355.1_2135441_2135657_+	NA	NA|74aa|up_5|NZ_CP027355.1_2135755_2135977_+	PHA00080, PHA00080, DksA-like zinc finger domain containing protein	NA|201aa|up_4|NZ_CP027355.1_2136187_2136790_-	NA	NA|56aa|up_3|NZ_CP027355.1_2137032_2137200_+	NA	NA|73aa|up_2|NZ_CP027355.1_2137239_2137458_+	pfam07825, Exc, Excisionase-like protein	NA|357aa|up_1|NZ_CP027355.1_2137435_2138506_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|NZ_CP027355.1_2138640_2139924_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|478aa|down_0|NZ_CP027355.1_2142600_2144034_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_1|NZ_CP027355.1_2144109_2145162_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_2|NZ_CP027355.1_2145345_2146299_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_3|NZ_CP027355.1_2146339_2147335_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_4|NZ_CP027355.1_2147489_2148308_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_5|NZ_CP027355.1_2148308_2149367_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_6|NZ_CP027355.1_2149369_2150059_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_7|NZ_CP027355.1_2150058_2150832_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_8|NZ_CP027355.1_2150997_2151147_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ	NA|263aa|down_9|NZ_CP027355.1_2151275_2152064_+	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional
GCF_003018815.1_ASM301881v1	NZ_CP027355	Escherichia coli strain 2013C-4991 chromosome, complete genome	5	2389741-2389837	5	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|231aa|up_9|NZ_CP027355.1_2381536_2382229_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP027355.1_2382448_2382991_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP027355.1_2383461_2384328_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP027355.1_2384329_2384542_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP027355.1_2384649_2385171_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP027355.1_2385206_2386592_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP027355.1_2386765_2387260_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP027355.1_2387262_2387985_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP027355.1_2388102_2388612_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP027355.1_2388608_2389676_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP027355.1_2389870_2390764_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP027355.1_2390760_2391576_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP027355.1_2391586_2392846_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP027355.1_2392855_2394523_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP027355.1_2394839_2395889_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP027355.1_2395910_2397146_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NZ_CP027355.1_2397156_2397942_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|NZ_CP027355.1_2398946_2400092_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NZ_CP027355.1_2400113_2401415_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|NZ_CP027355.1_2401471_2402833_-	PRK08044, PRK08044, allantoinase AllB
GCF_003018815.1_ASM301881v1	NZ_CP027355	Escherichia coli strain 2013C-4991 chromosome, complete genome	6	2912367-2912508	6	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	52	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|96aa|up_9|NZ_CP027355.1_2901358_2901646_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_8|NZ_CP027355.1_2901642_2902929_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_7|NZ_CP027355.1_2902979_2903921_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_6|NZ_CP027355.1_2903935_2904706_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_5|NZ_CP027355.1_2905178_2906693_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_4|NZ_CP027355.1_2906723_2907866_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|NZ_CP027355.1_2907994_2909212_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|NZ_CP027355.1_2909285_2910839_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|NZ_CP027355.1_2910947_2911733_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|NZ_CP027355.1_2911738_2912329_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|NZ_CP027355.1_2912537_2912933_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_1|NZ_CP027355.1_2913194_2916416_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_2|NZ_CP027355.1_2916433_2917582_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_3|NZ_CP027355.1_2918037_2918859_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_4|NZ_CP027355.1_2919025_2919940_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_5|NZ_CP027355.1_2920005_2920956_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_6|NZ_CP027355.1_2920957_2921407_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_7|NZ_CP027355.1_2921531_2922026_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_8|NZ_CP027355.1_2922025_2924842_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|314aa|down_9|NZ_CP027355.1_2924884_2925826_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase
GCF_003018815.1_ASM301881v1	NZ_CP027355	Escherichia coli strain 2013C-4991 chromosome, complete genome	7	4910206-4910722	1,7,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG	28,28,29	0	0	NA	NA	I-E:I-E:I-E	8,8,8	8	Unclear	DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|47aa|up_1|NZ_CP027355.1_4908915_4909056_-,NA	NA|434aa|up_9|NZ_CP027355.1_4899612_4900914_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP027355.1_4900961_4903196_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP027355.1_4903273_4903522_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP027355.1_4903521_4903857_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP027355.1_4903927_4904719_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP027355.1_4904946_4906584_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP027355.1_4906671_4907970_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP027355.1_4908029_4908902_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP027355.1_4908915_4909056_-	NA	NA|224aa|up_0|NZ_CP027355.1_4909194_4909866_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP027355.1_4911360_4912839_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP027355.1_4912865_4914143_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP027355.1_4914461_4915247_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP027355.1_4915316_4916771_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_4|NZ_CP027355.1_4916864_4918202_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP027355.1_4918179_4918959_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP027355.1_4918955_4919816_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP027355.1_4919963_4920539_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP027355.1_4920555_4920816_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP027355.1_4920806_4922078_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_003018815.1_ASM301881v1	NZ_CP027355	Escherichia coli strain 2013C-4991 chromosome, complete genome	8	4936271-4937214	2,8,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	13,15,15	15	TypeI-E	DEDDh,DinG,c2c9_V-U4,cas3,PrimPol,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|571aa|up_9|NZ_CP027355.1_4924635_4926348_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP027355.1_4926421_4927156_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|889aa|up_7|NZ_CP027355.1_4927514_4930181_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|503aa|up_6|NZ_CP027355.1_4930595_4932104_+	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cse2gr11|161aa|up_5|NZ_CP027355.1_4932096_4932579_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|364aa|up_4|NZ_CP027355.1_4932591_4933683_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|225aa|up_3|NZ_CP027355.1_4933685_4934360_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|200aa|up_2|NZ_CP027355.1_4934346_4934946_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|306aa|up_1|NZ_CP027355.1_4934961_4935879_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|NZ_CP027355.1_4935880_4936165_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP027355.1_4937234_4938272_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP027355.1_4938523_4939432_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP027355.1_4939433_4940861_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP027355.1_4940860_4941466_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP027355.1_4941515_4941839_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP027355.1_4942032_4942344_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP027355.1_4942362_4943073_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP027355.1_4943072_4943552_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP027355.1_4943548_4944598_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP027355.1_4944578_4945340_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
