assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003018475.1_ASM301847v1	NZ_CP027550	Escherichia coli strain 2015C-4136CT1 chromosome, complete genome	1	3891442-3891545	1	CRISPRCasFinder	no		cas14j,DinG,cas3,DEDDh,c2c9_V-U4,csa3,RT	Orphan	GCGGAGGAGGACGAGGACCGCCGCGAAAG	29	0	0	NA	NA	NA	1	1	Orphan	cas14j,DinG,cas3,DEDDh,c2c9_V-U4,csa3,RT	NA|94aa|up_9|NZ_CP027550.1_3883109_3883391_+,NA|143aa|up_8|NZ_CP027550.1_3883549_3883978_+,NA|144aa|up_7|NZ_CP027550.1_3884025_3884457_+,NA|61aa|up_6|NZ_CP027550.1_3884530_3884713_+,NA|46aa|up_5|NZ_CP027550.1_3884842_3884980_+,NA|222aa|up_4|NZ_CP027550.1_3885166_3885832_+,NA|238aa|up_3|NZ_CP027550.1_3885960_3886674_+,NA|62aa|down_2|NZ_CP027550.1_3893437_3893623_+,NA|111aa|down_3|NZ_CP027550.1_3893606_3893939_+,NA|187aa|down_4|NZ_CP027550.1_3893938_3894499_+	NA|94aa|up_9|NZ_CP027550.1_3883109_3883391_+	NA	NA|143aa|up_8|NZ_CP027550.1_3883549_3883978_+	NA	NA|144aa|up_7|NZ_CP027550.1_3884025_3884457_+	NA	NA|61aa|up_6|NZ_CP027550.1_3884530_3884713_+	NA	NA|46aa|up_5|NZ_CP027550.1_3884842_3884980_+	NA	NA|222aa|up_4|NZ_CP027550.1_3885166_3885832_+	NA	NA|238aa|up_3|NZ_CP027550.1_3885960_3886674_+	NA	NA|84aa|up_2|NZ_CP027550.1_3888601_3888853_+	pfam02831, gpW, gpW	NA|547aa|up_1|NZ_CP027550.1_3888861_3890502_+	pfam05136, Phage_portal_2, Phage portal protein, lambda family	NA|287aa|up_0|NZ_CP027550.1_3890498_3891359_+	cd07022, S49_Sppa_36K_type, Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad	NA|134aa|down_0|NZ_CP027550.1_3891923_3892325_+	pfam02924, HDPD, Bacteriophage lambda head decoration protein D	NA|352aa|down_1|NZ_CP027550.1_3892380_3893436_+	pfam03864, Phage_cap_E, Phage major capsid protein E	NA|62aa|down_2|NZ_CP027550.1_3893437_3893623_+	NA	NA|111aa|down_3|NZ_CP027550.1_3893606_3893939_+	NA	NA|187aa|down_4|NZ_CP027550.1_3893938_3894499_+	NA	NA|79aa|down_5|NZ_CP027550.1_3894512_3894749_+	pfam10948, DUF2635, Protein of unknown function (DUF2635)	NA|501aa|down_6|NZ_CP027550.1_3894745_3896248_+	COG4386, COG4386, Mu-like prophage tail sheath protein gpL [General function prediction only]	NA|122aa|down_7|NZ_CP027550.1_3896287_3896653_+	pfam10618, Tail_tube, Phage tail tube protein	NA|94aa|down_8|NZ_CP027550.1_3896652_3896934_+	pfam10109, Phage_TAC_7, Phage tail assembly chaperone proteins, E, or 41 or 14	NA|656aa|down_9|NZ_CP027550.1_3897069_3899037_+	cd00254, LT-like, lytic transglycosylase(LT)-like domain
GCF_003018475.1_ASM301847v1	NZ_CP027550	Escherichia coli strain 2015C-4136CT1 chromosome, complete genome	2	4157929-4158068	2	CRISPRCasFinder	no		cas14j,DinG,cas3,DEDDh,c2c9_V-U4,csa3,RT	Orphan	TGTGTAGGTCGGATAAGGCGTTCACGTCGCATCCGACAATAACA	44	0	0	NA	NA	NA	1	1	Orphan	cas14j,DinG,cas3,DEDDh,c2c9_V-U4,csa3,RT	NA,NA	NA|335aa|up_9|NZ_CP027550.1_4146474_4147479_-	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated	NA|315aa|up_8|NZ_CP027550.1_4147489_4148434_-	PRK12354, PRK12354, carbamate kinase; Reviewed	NA|407aa|up_7|NZ_CP027550.1_4148444_4149665_-	PRK01388, PRK01388, arginine deiminase; Provisional	NA|151aa|up_6|NZ_CP027550.1_4150342_4150795_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|335aa|up_5|NZ_CP027550.1_4150839_4151844_-	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|139aa|up_4|NZ_CP027550.1_4152005_4152422_+	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|168aa|up_3|NZ_CP027550.1_4152598_4153102_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|396aa|up_2|NZ_CP027550.1_4153294_4154482_+	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|952aa|up_1|NZ_CP027550.1_4154528_4157384_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|148aa|up_0|NZ_CP027550.1_4157383_4157827_-	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|504aa|down_0|NZ_CP027550.1_4158084_4159596_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|367aa|down_1|NZ_CP027550.1_4159862_4160963_+	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|361aa|down_2|NZ_CP027550.1_4160962_4162045_+	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|560aa|down_3|NZ_CP027550.1_4162027_4163707_-	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|340aa|down_4|NZ_CP027550.1_4163836_4164856_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|379aa|down_5|NZ_CP027550.1_4166443_4167579_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|394aa|down_6|NZ_CP027550.1_4170757_4171939_-	cd09117, PLDc_Bfil_DEXD_like, Catalytic domain of type II restriction endonucleases BfiI and NgoFVII, and uncharacterized proteins with a DEAD domain	NA|50aa|down_7|NZ_CP027550.1_4172198_4172348_+	pfam01527, HTH_Tnp_1, Transposase	NA|41aa|down_8|NZ_CP027550.1_4174386_4174509_+	COG3183, COG3183, Predicted restriction endonuclease [Defense mechanisms]	NA|327aa|down_9|NZ_CP027550.1_4174516_4175497_-	pfam03629, SASA, Carbohydrate esterase, sialic acid-specific acetylesterase
GCF_003018475.1_ASM301847v1	NZ_CP027550	Escherichia coli strain 2015C-4136CT1 chromosome, complete genome	3	4328616-4328747	1	PILER-CR	no		cas14j,DinG,cas3,DEDDh,c2c9_V-U4,csa3,RT	Orphan	TTTTCAATATTGGTGAT	17	0	0	NA	NA	NA	2	2	Orphan	cas14j,DinG,cas3,DEDDh,c2c9_V-U4,csa3,RT	NA,NA	NA|122aa|up_9|NZ_CP027550.1_4314251_4314617_+	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|274aa|up_8|NZ_CP027550.1_4314777_4315599_+	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|383aa|up_7|NZ_CP027550.1_4316054_4317203_+	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|1074aa|up_6|NZ_CP027550.1_4317220_4320442_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|132aa|up_5|NZ_CP027550.1_4320702_4321098_+	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|197aa|up_4|NZ_CP027550.1_4321216_4321807_-	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|518aa|up_3|NZ_CP027550.1_4322705_4324259_-	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|406aa|up_2|NZ_CP027550.1_4324331_4325549_-	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|381aa|up_1|NZ_CP027550.1_4325677_4326820_-	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|505aa|up_0|NZ_CP027550.1_4326850_4328365_-	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|257aa|down_0|NZ_CP027550.1_4328837_4329608_+	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|314aa|down_1|NZ_CP027550.1_4329622_4330564_+	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|429aa|down_2|NZ_CP027550.1_4330614_4331901_+	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|96aa|down_3|NZ_CP027550.1_4331897_4332185_+	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|444aa|down_4|NZ_CP027550.1_4332243_4333575_+	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|177aa|down_5|NZ_CP027550.1_4333682_4334213_+	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|621aa|down_6|NZ_CP027550.1_4334205_4336068_+	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|160aa|down_7|NZ_CP027550.1_4336259_4336739_+	PRK10769, folA, type 3 dihydrofolate reductase	NA|78aa|down_8|NZ_CP027550.1_4336824_4337058_+	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only]	NA|105aa|down_9|NZ_CP027550.1_4337060_4337375_+	pfam01845, CcdB, CcdB protein
