The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP027452	Escherichia coli strain 2014C-3338 chromosome, complete genome	4799014	1466	51956	4799014	terminase,integrase,holin,tRNA,protease,head,tail,plate,portal,capsid	Shigella_phage(48.78%)	60	11240:11256	54294:54310
WP_071556291.1|1466_1658_-	recombinase family protein	NA	A0A1S6L009	Salmonella_phage	83.3	1.9e-14
WP_106889348.1|1688_2186_+|tail	tail fiber protein	tail	Q9MCR6	Enterobacteria_phage	68.3	7.4e-55
WP_052920590.1|2185_2794_+|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	84.9	4.9e-93
WP_071556292.1|2759_2963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000383560.1|3863_4448_-	YmfQ family protein	NA	O22003	Shigella_phage	98.5	7.8e-112
WP_158708411.1|5482_5908_-|tail	phage tail protein	tail	U5P0R9	Shigella_phage	99.3	2.0e-80
WP_000643721.1|5907_6456_-|plate	phage baseplate assembly protein	plate	U5P081	Shigella_phage	96.7	3.6e-95
WP_000999527.1|6455_7535_-|plate	baseplate protein	plate	U5P0H6	Shigella_phage	99.7	6.9e-207
WP_001469317.1|7531_8860_-	hypothetical protein	NA	Q8SBG8	Shigella_phage	98.6	2.7e-245
WP_052920592.1|8920_10756_-|tail	phage tail tape measure protein	tail	S5FM63	Shigella_phage	98.5	3.6e-304
WP_000661054.1|10897_11167_-|tail	phage tail assembly protein	tail	M1FPE4	Enterobacteria_phage	100.0	3.5e-43
WP_000090993.1|11166_11523_-	hypothetical protein	NA	U5P076	Shigella_phage	99.2	1.2e-62
11240:11256	attL	CCGTGCAGCCAGGCAGA	NA	NA	NA	NA
WP_000155713.1|11522_13019_-|tail	phage tail protein	tail	M1FN90	Enterobacteria_phage	99.0	4.5e-273
WP_000497751.1|13002_13173_-	DUF2635 domain-containing protein	NA	Q8SBH3	Shigella_phage	100.0	9.3e-26
WP_000779279.1|13181_13742_-	hypothetical protein	NA	M1FQV7	Enterobacteria_phage	99.5	2.3e-105
WP_000235781.1|13738_14245_-	hypothetical protein	NA	M1FPE2	Enterobacteria_phage	99.4	6.5e-91
WP_000702406.1|14219_14630_-|head	phage head closure protein	head	M1FJ87	Enterobacteria_phage	98.5	7.7e-74
WP_000927711.1|14626_14950_-|head,tail	phage gp6-like head-tail connector protein	head,tail	U5P072	Shigella_phage	99.1	1.1e-56
WP_000601358.1|14952_15153_-	hypothetical protein	NA	S5FNU1	Shigella_phage	98.5	1.0e-26
WP_001603263.1|15201_16407_-|capsid	phage major capsid protein	capsid	U5P0G9	Shigella_phage	99.3	2.7e-223
WP_001603264.1|16421_17072_-|head,protease	HK97 family phage prohead protease	head,protease	U5P4H2	Shigella_phage	99.1	2.1e-118
WP_000466255.1|17049_18291_-|portal	phage portal protein	portal	U5P411	Shigella_phage	99.8	2.0e-242
WP_000605606.1|18290_18473_-	hypothetical protein	NA	S5FXQ9	Shigella_phage	100.0	1.7e-25
WP_122993597.1|18484_19981_-|terminase	terminase large subunit	terminase	A0A1C9IIA1	Salmonella_phage	99.8	4.3e-300
WP_000929175.1|20214_20709_-|terminase	phage terminase small subunit P27 family	terminase	U5P067	Shigella_phage	99.4	3.9e-88
WP_052920593.1|20833_21184_-	HNH endonuclease	NA	M1FQV2	Enterobacteria_phage	96.6	8.0e-64
WP_001089762.1|21334_21670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000613841.1|21770_22340_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001434542.1|22515_22896_-	DUF2570 domain-containing protein	NA	U5P0U9	Shigella_phage	87.2	2.6e-52
WP_106889350.1|22879_23356_-	glycoside hydrolase family protein	NA	S5FV07	Shigella_phage	96.8	5.4e-87
WP_042095380.1|23359_23686_-|holin	phage holin, lambda family	holin	U5P0K7	Shigella_phage	98.1	7.5e-56
WP_052920595.1|24003_27156_+	NACHT domain-containing protein	NA	NA	NA	NA	NA
WP_052920596.1|27258_27438_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033866693.1|27669_28014_-	antitermination protein	NA	A0A0P0ZCW0	Stx2-converting_phage	95.4	1.4e-57
WP_064758401.1|28031_29021_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	98.8	2.3e-193
WP_052920598.1|29028_29826_-	KilA-N domain-containing protein	NA	A0A0P0ZCS0	Stx2-converting_phage	98.9	3.2e-148
WP_000210154.1|30254_30581_-	LexA family transcriptional regulator	NA	A0A0N7KZF7	Stx2-converting_phage	99.1	2.7e-53
WP_001341555.1|30577_31231_-	phage N-6-adenine-methyltransferase	NA	A5LH72	Enterobacteria_phage	99.1	3.3e-127
WP_072130381.1|31230_31725_-	PerC family transcriptional regulator	NA	A0A0P0ZCF0	Stx2-converting_phage	98.1	8.1e-86
WP_001250269.1|32652_32832_-	DUF4222 domain-containing protein	NA	S5M7S5	Escherichia_phage	68.5	7.8e-15
WP_052920601.1|33007_33565_-	protein YmfL	NA	S5FXP0	Shigella_phage	95.7	3.3e-96
WP_000649480.1|33608_33809_-	transcriptional regulator	NA	U5P445	Shigella_phage	98.5	1.9e-30
WP_001005353.1|34750_35059_+	hypothetical protein	NA	I6PDF6	Cronobacter_phage	80.0	3.8e-09
WP_072130382.1|34996_35338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_136800367.1|35454_35766_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000939945.1|35802_36048_+	excisionase-like protein from lambdoid prophage 14	NA	NA	NA	NA	NA
WP_052920602.1|36028_37156_+|integrase	tyrosine-type recombinase/integrase	integrase	O21925	Phage_21	61.2	4.2e-122
WP_052920603.1|37402_38572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052920604.1|38744_41423_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_000444484.1|41753_43004_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	96.3	1.9e-22
WP_001248691.1|43175_43829_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
WP_000476093.1|43838_44300_+	phosphatase NudJ	NA	NA	NA	NA	NA
WP_001317772.1|44353_45460_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_001317771.1|45495_46137_+	high frequency lysogenization protein HflD	NA	NA	NA	NA	NA
WP_000423742.1|46140_47511_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	44.9	1.2e-107
WP_001265481.1|47679_48351_+	two-component system response regulator PhoP	NA	NA	NA	NA	NA
WP_000735412.1|48350_49811_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA	NA
WP_000133413.1|50364_50646_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016240520.1|50939_51380_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106889351.1|51542_51956_-|head,tail	phage head-tail connector protein	head,tail	NA	NA	NA	NA
54294:54310	attR	TCTGCCTGGCTGCACGG	NA	NA	NA	NA
>prophage 2
NZ_CP027452	Escherichia coli strain 2014C-3338 chromosome, complete genome	4799014	632407	686933	4799014	terminase,integrase,tRNA,protease,head,tail,portal,capsid,lysis	Enterobacteria_phage(53.33%)	72	663466:663481	691510:691525
WP_106889373.1|632407_633361_+|protease	omptin family outer membrane protease OmpT	protease	NA	NA	NA	NA
WP_158708403.1|633604_634261_+	methyltransferase	NA	NA	NA	NA	NA
WP_001695517.1|634673_634973_+|integrase	tyrosine-type recombinase/integrase	integrase	B9UDL9	Salmonella_phage	82.4	5.0e-30
WP_001695516.1|634992_635301_+|integrase	tyrosine-type recombinase/integrase	integrase	Q76H30	Enterobacteria_phage	69.3	1.8e-38
WP_001201825.1|635775_636729_+|protease	omptin family outer membrane protease OmpT	protease	NA	NA	NA	NA
WP_001226378.1|636915_638400_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000937502.1|638583_638889_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	76.5	2.8e-12
WP_000239874.1|638945_639614_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_120795384.1|639979_640093_+	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_000836768.1|640161_640395_+	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	88.3	1.1e-32
WP_000086514.1|640711_641302_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	7.3e-25
WP_000885616.1|641399_641975_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	95.3	6.5e-103
WP_000279163.1|641974_644935_-	hypothetical protein	NA	A0A0K2FIZ6	Escherichia_phage	53.7	4.0e-55
WP_106889374.1|645656_649070_-	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	97.3	0.0e+00
WP_000090891.1|649130_649763_-|tail	tail assembly protein	tail	A0A2R9YJH6	Escherichia_phage	99.5	2.2e-96
WP_106889375.1|649699_650443_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	96.8	2.5e-147
WP_016230622.1|650448_651147_-|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	98.7	6.2e-132
WP_000847355.1|651146_651476_-|tail	phage tail protein	tail	A0A2R9YJM0	Escherichia_phage	96.3	1.5e-56
WP_106889376.1|651472_654034_-|tail	phage tail tape measure protein	tail	A0A0K2FI43	Enterobacteria_phage	91.4	0.0e+00
WP_000459458.1|654026_654461_-|tail	phage tail assembly protein T	tail	A0A0K2FJB3	Enterobacteria_phage	99.2	1.5e-64
WP_033805293.1|654442_654865_-|tail	phage minor tail protein G	tail	A0A0K2FIQ8	Enterobacteria_phage	99.3	1.9e-72
WP_053276106.1|654880_655621_-|tail	phage tail protein	tail	A0A2I6TC77	Escherichia_phage	98.4	1.5e-131
WP_000683105.1|655628_656024_-|tail	tail protein	tail	A0A0K2FIF4	Enterobacteria_phage	100.0	1.0e-70
WP_000975051.1|656020_656599_-|tail	phage tail protein	tail	A0A2R9YJK4	Escherichia_phage	97.9	3.5e-80
WP_000753019.1|656610_656964_-|tail	tail attachment protein	tail	A0A2R9YJJ5	Escherichia_phage	98.3	2.6e-62
WP_000158868.1|656975_657371_-	DNA-packaging protein FI	NA	A0A2R9YJP4	Escherichia_phage	95.5	5.7e-58
WP_000063218.1|657412_658438_-|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	97.7	1.4e-188
WP_001513196.1|658493_658826_-|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	99.1	3.8e-55
WP_001357873.1|658835_660155_-	S49 family peptidase	NA	A0A2I6TC87	Escherichia_phage	97.9	1.0e-231
WP_001369921.1|660135_661737_-|portal	phage portal protein	portal	A0A0K2FJC0	Enterobacteria_phage	98.9	1.9e-309
WP_000198149.1|661733_661940_-|head,tail	Lambda prophage-derived head-to-tail joining protein W	head,tail	A0A2R9YJL2	Escherichia_phage	100.0	5.8e-30
WP_001585441.1|661936_663862_-|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	99.4	0.0e+00
663466:663481	attL	CCAGCGCCAGCAGCGA	NA	NA	NA	NA
WP_000453611.1|663836_664382_-	DNA-packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	98.3	2.3e-94
WP_001415975.1|664770_664965_+	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	96.9	4.3e-27
WP_000738421.1|665324_665618_+	increased serum survival lipoprotein Iss	NA	K7PL54	Enterobacteria_phage	90.7	5.9e-44
WP_001228695.1|665708_665891_-|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	98.3	2.9e-17
WP_001135277.1|666107_666605_-	lysozyme	NA	M1FJA0	Enterobacteria_phage	97.0	5.4e-90
WP_000839596.1|666604_666820_-|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	100.0	9.0e-34
WP_000737266.1|667408_668506_+	porin	NA	Q1MVN1	Enterobacteria_phage	76.5	2.2e-155
WP_001204791.1|668695_669079_-	antitermination protein QuuD	NA	A0A088CD47	Shigella_phage	83.3	4.4e-55
WP_000971068.1|669164_669305_-	YlcG family protein	NA	K7PHH3	Enterobacteria_phage	67.4	5.5e-08
WP_001099700.1|669301_669664_-	crossover junction endodeoxyribonuclease RusA	NA	K7PM48	Enterobacteria_phage	96.5	7.3e-60
WP_000774488.1|669660_669951_-	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	94.8	4.3e-47
WP_000224919.1|669943_670114_-	NinE family protein	NA	NA	NA	NA	NA
WP_001053033.1|670113_670569_-	DNA base-flipping protein YbcN	NA	I6PD71	Cronobacter_phage	67.5	3.7e-61
WP_001309322.1|670565_670667_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000068668.1|670765_671695_-	hypothetical protein	NA	A0A1R3Y6Z6	Salmonella_virus	40.0	3.0e-57
WP_106889377.1|671899_672217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106889378.1|672328_673855_-	recombinase family protein	NA	Q3HQV4	Burkholderia_phage	27.7	6.1e-31
WP_032139864.1|673912_674020_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001070442.1|674111_674444_-	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA	NA
WP_000145915.1|674511_674814_-	protein ren	NA	A0A0N6WES4	Escherichia_phage	95.7	1.1e-42
WP_106889379.1|674810_675512_-	Replication protein P	NA	K7P6G2	Enterobacteria_phage	99.1	2.9e-129
WP_012565044.1|675508_676438_-	replication protein	NA	A0A0M5M7Y1	Salmonella_phage	64.4	1.2e-111
WP_001182893.1|676524_677064_-	hypothetical protein	NA	K7PJT7	Enterobacteria_phage	66.5	2.2e-60
WP_106889380.1|677133_677364_-	helix-turn-helix domain-containing protein	NA	A0A2H4FNF3	Salmonella_phage	66.7	2.1e-20
WP_000858975.1|677468_678158_+	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	75.0	2.8e-92
WP_023148105.1|678669_678960_+	hypothetical protein	NA	K7P6H3	Enterobacteria_phage	85.1	5.0e-27
WP_000995453.1|679035_679332_+	host-nuclease inhibitor protein Gam	NA	A0A1I9LJN1	Stx_converting_phage	98.0	1.8e-48
WP_000100847.1|679337_680123_+	phage recombination protein Bet	NA	A0A1I9LJN0	Stx_converting_phage	100.0	6.3e-149
WP_106889382.1|680119_680800_+	YqaJ viral recombinase family protein	NA	B6DZ61	Enterobacteria_phage	97.8	8.7e-131
WP_000149544.1|680796_680979_+	DUF1317 domain-containing protein	NA	A0A1U8QQC1	Enterobacteria_phage	96.7	6.9e-27
WP_000548537.1|680951_681143_+	DUF1382 family protein	NA	A0A0P0ZC67	Stx2-converting_phage	98.4	2.1e-26
WP_001443983.1|681153_681435_+	hypothetical protein	NA	A0A0P0ZE02	Stx2-converting_phage	98.9	7.2e-47
WP_000763385.1|681533_681752_+	TraR/DksA family transcriptional regulator	NA	M1FQT7	Enterobacteria_phage	100.0	7.5e-36
WP_000488407.1|681799_682078_+	DUF4222 domain-containing protein	NA	M1FPC8	Enterobacteria_phage	97.8	4.9e-48
WP_000446905.1|682049_682421_+	helix-turn-helix domain-containing protein	NA	M1FJ59	Enterobacteria_phage	81.0	2.1e-46
WP_000051902.1|682276_683440_+|integrase	site-specific integrase	integrase	A0A088CD23	Shigella_phage	86.6	3.0e-200
WP_000729156.1|683802_684669_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	37.5	1.0e-30
WP_000190288.1|684670_684883_+	ribosome-associated protein YbcJ	NA	NA	NA	NA	NA
WP_001143512.1|684990_685512_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_000912345.1|685547_686933_-|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	34.8	3.9e-45
691510:691525	attR	CCAGCGCCAGCAGCGA	NA	NA	NA	NA
>prophage 3
NZ_CP027452	Escherichia coli strain 2014C-3338 chromosome, complete genome	4799014	965776	1008198	4799014	transposase,plate	Clostridioides_phage(33.33%)	37	NA	NA
WP_001561476.1|965776_966274_-|transposase	REP-associated tyrosine transposase RayT	transposase	NA	NA	NA	NA
WP_123009815.1|966450_967224_-	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	37.7	1.6e-19
WP_000729706.1|967409_967670_+	type II toxin-antitoxin system antitoxin DinJ	NA	NA	NA	NA	NA
WP_042020808.1|967893_968076_+	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA	NA
WP_001225679.1|968231_968972_+	murein L,D-transpeptidase	NA	NA	NA	NA	NA
WP_000333380.1|968942_969710_-	class II glutamine amidotransferase	NA	NA	NA	NA	NA
WP_000284050.1|969825_970404_-	D-sedoheptulose 7-phosphate isomerase	NA	A0A067XQR2	Caulobacter_phage	32.0	1.1e-14
WP_000973081.1|970643_973088_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_000532690.1|973130_973604_-	C-lysozyme inhibitor	NA	NA	NA	NA	NA
WP_001561474.1|973757_974528_+	2-oxoglutaramate amidase	NA	NA	NA	NA	NA
WP_062864337.1|974597_975734_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_032170719.1|976122_976665_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042106401.1|980791_981235_-	DcrB-related protein	NA	NA	NA	NA	NA
WP_106889392.1|981258_983472_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
WP_052431198.1|983496_983868_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042106403.1|983864_984599_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042106404.1|984751_985552_-	DUF2094 domain-containing protein	NA	NA	NA	NA	NA
WP_042106405.1|985740_986217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042106407.1|986213_986909_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106889393.1|987155_991022_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_042106309.1|991349_991793_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042106307.1|991794_992163_-	DUF2778 domain-containing protein	NA	NA	NA	NA	NA
WP_052920659.1|992254_993571_-	type VI secretion system protein TssL	NA	NA	NA	NA	NA
WP_001316112.1|993567_994911_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_001045933.1|994914_995448_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_000312804.1|995515_996001_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_042102253.1|996645_997053_-	BPSL0067 family protein	NA	NA	NA	NA	NA
WP_088144551.1|997103_998600_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_000996814.1|998642_999188_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_042102251.1|999249_999540_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042102250.1|999542_1000106_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042102248.1|1000118_1002752_-	type VI secretion system ATPase TssH	NA	A0A2I7SAX5	Vibrio_phage	33.0	1.4e-80
WP_000804008.1|1003084_1003999_+	type VI secretion system-associated protein TagK	NA	NA	NA	NA	NA
WP_034174031.1|1003985_1004816_+	impE family protein	NA	NA	NA	NA	NA
WP_001276638.1|1004812_1005307_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_042102246.1|1005322_1007206_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_052920658.1|1007202_1008198_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 4
NZ_CP027452	Escherichia coli strain 2014C-3338 chromosome, complete genome	4799014	1616516	1669638	4799014	terminase,integrase,tRNA,holin,protease,portal,tail,lysis	Escherichia_phage(52.63%)	64	1615071:1615086	1663059:1663074
1615071:1615086	attL	TTAAAACGCTCCATAA	NA	NA	NA	NA
WP_000918363.1|1616516_1617932_-	replicative DNA helicase	NA	O80281	Escherichia_phage	78.3	4.8e-200
WP_000235522.1|1618014_1618998_+	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_000891406.1|1619163_1619406_-	envelope stress response protein PspG	NA	NA	NA	NA	NA
WP_001514813.1|1619539_1620577_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_000332263.1|1620665_1621763_+|integrase	site-specific integrase	integrase	S5MDN5	Escherichia_phage	100.0	5.0e-213
WP_106889410.1|1621824_1622073_+	DinI family protein	NA	S5MQI1	Escherichia_phage	97.6	1.2e-37
WP_033802776.1|1622343_1623015_-	DUF4376 domain-containing protein	NA	S5MBX6	Escherichia_phage	84.3	5.1e-107
WP_106889411.1|1623083_1624199_-|tail	phage tail protein	tail	S5MDN9	Escherichia_phage	98.2	1.7e-54
WP_000078855.1|1624343_1624484_-	Hok/Gef family protein	NA	S5M7Q0	Escherichia_phage	93.5	8.5e-17
WP_106889412.1|1624682_1628369_-	DUF1983 domain-containing protein	NA	S5MW25	Escherichia_phage	88.0	0.0e+00
WP_072121435.1|1629283_1629916_-|tail	tail assembly protein	tail	Q9EYE5	Enterobacteria_phage	90.5	4.3e-100
WP_044808579.1|1629861_1630605_-|tail	phage tail protein	tail	S5MQI8	Escherichia_phage	98.0	5.9e-149
WP_044191034.1|1630615_1631314_-|tail	phage minor tail protein L	tail	S5M7Q4	Escherichia_phage	97.8	1.8e-131
WP_000847279.1|1631313_1631643_-|tail	phage tail protein	tail	S5MW28	Escherichia_phage	100.0	5.6e-59
WP_033811966.1|1631639_1634273_-|tail	phage tail tape measure protein	tail	S5MBY3	Escherichia_phage	84.5	0.0e+00
WP_024177471.1|1634262_1634667_-|tail	phage tail assembly protein T	tail	S5MDP5	Escherichia_phage	78.4	1.2e-42
WP_000479078.1|1634693_1635125_-|tail	phage minor tail protein G	tail	A0A0K2FIQ8	Enterobacteria_phage	65.0	1.5e-40
WP_000235129.1|1635144_1635894_-|tail	phage tail protein	tail	S5M7Q5	Escherichia_phage	94.4	2.1e-130
WP_000682716.1|1635901_1636300_-|tail	tail protein	tail	Q9EYD7	Enterobacteria_phage	100.0	5.9e-71
WP_000974963.1|1636312_1636936_-	hypothetical protein	NA	S5MBY4	Escherichia_phage	99.5	1.9e-100
WP_001281350.1|1636938_1637220_-	DNA breaking-rejoining protein	NA	Q8VNN4	Enterobacteria_phage	97.8	3.9e-45
WP_000414249.1|1637212_1637539_-	DUF2190 family protein	NA	S5MQJ5	Escherichia_phage	99.1	2.3e-49
WP_001114424.1|1637626_1639651_-|protease	Clp protease ClpP	protease	S5M7Q8	Escherichia_phage	99.8	0.0e+00
WP_106889413.1|1639595_1641098_-|portal	phage portal protein	portal	Q9EYD2	Enterobacteria_phage	99.6	5.9e-289
WP_000102415.1|1641097_1641310_-	hypothetical protein	NA	S5MBY8	Escherichia_phage	98.6	3.0e-29
WP_001077608.1|1641306_1643430_-|terminase	phage terminase large subunit family protein	terminase	S5MDQ1	Escherichia_phage	99.0	0.0e+00
WP_000373398.1|1643426_1643903_-	DUF1441 family protein	NA	Q8VNN8	Enterobacteria_phage	98.7	1.8e-82
WP_001255340.1|1644315_1644783_-|lysis	lysis protein	lysis	Q9EYC9	Enterobacteria_phage	87.2	4.4e-65
WP_000992040.1|1644779_1645313_-	lysozyme	NA	A0A2R2Z343	Escherichia_phage	94.9	2.0e-98
WP_001063217.1|1645438_1645759_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106889572.1|1645738_1646413_-	hypothetical protein	NA	Q08JA0	Stx2-converting_phage	76.4	8.8e-59
WP_000284506.1|1646416_1646632_-|holin	holin	holin	Q9ZWW2	Enterobacteria_phage	100.0	6.9e-34
WP_001290208.1|1646709_1646955_-	DUF826 domain-containing protein	NA	A0A088CE63	Shigella_phage	100.0	8.5e-20
WP_000142780.1|1646995_1647175_-	DUF1378 family protein	NA	A0A2R2Z345	Escherichia_phage	93.2	5.4e-24
WP_000142974.1|1647310_1649257_-	DUF1737 domain-containing protein	NA	S5MDQ7	Escherichia_phage	98.6	0.0e+00
WP_000738072.1|1649769_1650039_-	Shiga toxin Stx2a subunit B	NA	Q6DWN4	Enterobacteria_phage	100.0	1.2e-43
WP_001365678.1|1650050_1651010_-	Shiga toxin Stx2a subunit A	NA	A0A0P0ZDQ7	Stx2-converting_phage	99.7	3.6e-175
WP_000483502.1|1651392_1652451_-	site-specific DNA-methyltransferase	NA	S5MDR0	Escherichia_phage	98.9	2.0e-206
WP_000917735.1|1652602_1652800_-	hypothetical protein	NA	S5MQK8	Escherichia_phage	98.5	1.8e-28
WP_001204806.1|1653015_1653396_-	antitermination protein Q	NA	S5M7R9	Escherichia_phage	100.0	4.9e-67
WP_001202275.1|1653413_1654403_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	98.8	4.7e-194
WP_001061444.1|1654410_1655220_-	KilA-N domain-containing protein	NA	A0A291AWU7	Escherichia_phage	100.0	1.8e-151
WP_000767113.1|1655239_1655629_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A0P0ZD39	Stx2-converting_phage	100.0	7.1e-69
WP_000210167.1|1655625_1655952_-	LexA family transcriptional regulator	NA	S5FXP5	Shigella_phage	99.1	2.7e-53
WP_106889414.1|1655948_1656602_-	phage N-6-adenine-methyltransferase	NA	A0A0P0ZCC0	Stx2-converting_phage	99.5	1.6e-126
WP_000061520.1|1656696_1657515_-	helix-turn-helix domain-containing protein	NA	A0A291AWW0	Escherichia_phage	98.9	6.8e-122
WP_000620696.1|1657511_1657736_-	hypothetical protein	NA	A5LH70	Enterobacteria_phage	100.0	5.7e-39
WP_077166608.1|1657732_1658896_-	peptidase	NA	A0A0P0ZE80	Stx2-converting_phage	84.0	1.4e-176
WP_000515854.1|1658892_1659444_-	hypothetical protein	NA	A0A0P0ZE62	Stx2-converting_phage	99.5	2.9e-100
WP_001191670.1|1659436_1659697_-	helix-turn-helix transcriptional regulator	NA	A0A0P0ZCZ7	Stx2-converting_phage	100.0	1.6e-40
WP_001020631.1|1659794_1660487_+	helix-turn-helix transcriptional regulator	NA	S5FUZ3	Shigella_phage	95.7	1.4e-120
WP_000135680.1|1661188_1661551_+	hypothetical protein	NA	Q8SBF8	Shigella_phage	100.0	8.6e-61
WP_106889415.1|1661616_1662441_+	DUF2303 family protein	NA	U5P439	Shigella_phage	99.3	6.6e-149
WP_000008232.1|1662568_1663105_+	5'-deoxynucleotidase	NA	S5MW55	Escherichia_phage	100.0	7.4e-101
1663059:1663074	attR	TTATGGAGCGTTTTAA	NA	NA	NA	NA
WP_001242725.1|1663095_1663458_+	hypothetical protein	NA	K7PH61	Enterobacteria_phage	97.4	3.4e-65
WP_000206746.1|1663457_1664267_+	hypothetical protein	NA	Q8HAA7	Salmonella_phage	61.4	9.5e-76
WP_001061343.1|1664266_1664839_+	3'-5' exoribonuclease	NA	K7PLW7	Enterobacteria_phage	96.8	3.7e-106
WP_001093911.1|1664875_1665148_+	hypothetical protein	NA	S5MQM5	Escherichia_phage	100.0	7.2e-44
WP_000089360.1|1665181_1665730_-	hypothetical protein	NA	S5M7T3	Escherichia_phage	93.4	1.1e-83
WP_000287252.1|1665752_1666226_-	SocA family protein	NA	K4NZT7	Burkholderia_phage	31.8	2.4e-18
WP_000416264.1|1666749_1667265_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA	NA
WP_001296638.1|1667306_1667516_-	CsbD family protein	NA	NA	NA	NA	NA
WP_001318177.1|1667631_1668957_-	MATE family efflux transporter DinF	NA	NA	NA	NA	NA
WP_000646078.1|1669029_1669638_-	repressor LexA	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
>prophage 5
NZ_CP027452	Escherichia coli strain 2014C-3338 chromosome, complete genome	4799014	2148368	2161432	4799014	holin,integrase	Morganella_phage(30.0%)	17	2138592:2138604	2161824:2161836
2138592:2138604	attL	GGCGGTCCAGTTC	NA	NA	NA	NA
WP_000246959.1|2148368_2149790_-	DNA transfer protein	NA	B6SCW4	Bacteriophage	53.2	5.7e-124
WP_000909177.1|2149789_2150467_-	hypothetical protein	NA	Q2A0B2	Sodalis_phage	71.6	7.0e-56
WP_000420674.1|2150460_2150922_-	DUF2824 family protein	NA	Q2A0B3	Sodalis_phage	72.2	2.9e-61
WP_001244106.1|2151683_2154440_-	DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	57.3	1.8e-299
WP_001208876.1|2154426_2154798_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000628966.1|2154790_2155132_-	hypothetical protein	NA	A0A1B5FPL8	Escherichia_phage	61.5	2.5e-33
WP_001058740.1|2155142_2155745_-	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	36.3	2.6e-25
WP_000181940.1|2155737_2155959_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106889430.1|2155955_2156219_-|holin	nicotinic acetylcholine receptor subunit beta	holin	NA	NA	NA	NA
WP_106889431.1|2156215_2156410_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106889432.1|2156402_2157470_-	ash family protein	NA	A0A1C9IHV9	Salmonella_phage	44.1	5.7e-12
WP_000476150.1|2157463_2157646_-	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
WP_001019369.1|2157638_2158472_-	hypothetical protein	NA	G9L6G1	Escherichia_phage	47.5	5.3e-21
WP_106889433.1|2158484_2158916_-	hypothetical protein	NA	A0A1W6JPH9	Morganella_phage	49.0	6.7e-28
WP_106889434.1|2158915_2159119_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_106889435.1|2159231_2160077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085457054.1|2160172_2161432_-|integrase	site-specific integrase	integrase	A0A1W6JPG6	Morganella_phage	78.1	5.1e-193
2161824:2161836	attR	GGCGGTCCAGTTC	NA	NA	NA	NA
>prophage 6
NZ_CP027452	Escherichia coli strain 2014C-3338 chromosome, complete genome	4799014	3175889	3183029	4799014		Escherichia_phage(83.33%)	6	NA	NA
WP_001278992.1|3175889_3176528_-	aldolase	NA	A0A077SK32	Escherichia_phage	74.5	1.8e-82
WP_000590398.1|3176524_3177787_-	3-oxo-tetronate kinase	NA	A0A077SLJ7	Escherichia_phage	61.4	1.3e-135
WP_000848000.1|3177783_3178692_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.5	1.5e-117
WP_001318002.1|3178887_3179655_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	57.4	7.4e-70
WP_001141285.1|3179705_3180362_-	protein-serine/threonine phosphatase	NA	A0A077SLQ6	Escherichia_phage	46.1	4.3e-50
WP_001272914.1|3180467_3183029_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.7	7.8e-31
>prophage 7
NZ_CP027452	Escherichia coli strain 2014C-3338 chromosome, complete genome	4799014	3769056	3778502	4799014		Enterobacteria_phage(85.71%)	10	NA	NA
WP_021539241.1|3769056_3769983_+	glycine betaine ABC transporter ATP binding protein YehX	NA	G3M9Y6	Bacillus_virus	30.8	1.3e-23
WP_000783127.1|3769987_3770719_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA	NA
WP_001216963.1|3770699_3770807_-	protein YohO	NA	NA	NA	NA	NA
WP_001240405.1|3770866_3771598_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.0	2.2e-111
WP_001309587.1|3771819_3773505_+	two-component regulatory system sensor histidine kinase BtsS	NA	Q9EYF3	Enterobacteria_phage	99.5	7.3e-304
WP_000598641.1|3773501_3774221_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_052920575.1|3774267_3774738_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	99.4	3.0e-82
WP_001296231.1|3774779_3775241_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	99.3	3.2e-76
WP_001563695.1|3775365_3777369_-	hypothetical protein	NA	Q9EYF6	Enterobacteria_phage	97.3	0.0e+00
WP_001563693.1|3777365_3778502_-	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	98.4	9.0e-165
>prophage 8
NZ_CP027452	Escherichia coli strain 2014C-3338 chromosome, complete genome	4799014	4296568	4352856	4799014	terminase,integrase,holin,protease,bacteriocin,tail,portal,capsid,lysis	Shigella_phage(56.25%)	75	4295279:4295296	4315471:4315488
4295279:4295296	attL	TGTGTTGCACCAGCGGGT	NA	NA	NA	NA
WP_001254970.1|4296568_4297390_-|protease	serine protease	protease	NA	NA	NA	NA
WP_000233090.1|4297489_4297573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000743943.1|4297665_4298001_-	acid shock protein	NA	NA	NA	NA	NA
WP_000091847.1|4298398_4299652_-	MFS transporter	NA	NA	NA	NA	NA
WP_001019561.1|4299758_4300652_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000225276.1|4300786_4302007_+	DNA-binding transcriptional repressor Mlc	NA	NA	NA	NA	NA
WP_000919226.1|4302131_4302827_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA	NA
WP_071586384.1|4302779_4304072_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA	NA
WP_000148698.1|4304229_4304844_-	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	36.3	1.1e-28
WP_000526519.1|4304886_4305741_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
WP_000254426.1|4305742_4306297_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	57.7	1.4e-62
WP_106889513.1|4306334_4307498_-|integrase	site-specific integrase	integrase	A0A088CD23	Shigella_phage	99.2	9.4e-226
WP_124034985.1|4307353_4307800_-	helix-turn-helix domain-containing protein	NA	S5FM74	Shigella_phage	73.1	4.2e-41
WP_000497813.1|4307759_4308011_-	DUF4222 domain-containing protein	NA	A0A088CBN9	Shigella_phage	100.0	1.3e-39
WP_106889514.1|4308058_4308739_-	YqaJ viral recombinase family protein	NA	V5UT69	Shigella_phage	99.1	3.5e-132
WP_000100822.1|4308735_4309521_-	phage recombination protein Bet	NA	A0A088CBI3	Shigella_phage	100.0	6.3e-149
WP_000995034.1|4309526_4309823_-	host-nuclease inhibitor protein Gam	NA	V5URU8	Shigella_phage	100.0	1.5e-50
WP_001271581.1|4309819_4311868_-	exodeoxyribonuclease VIII	NA	V5UQJ3	Shigella_phage	98.5	0.0e+00
WP_106889515.1|4311976_4312363_-	hypothetical protein	NA	A0A088CBP0	Shigella_phage	96.9	4.7e-65
WP_000560215.1|4312453_4312669_-	cell division protein FtsZ	NA	A0A088CE40	Shigella_phage	98.6	2.8e-35
WP_001005965.1|4313000_4313357_-	hypothetical protein	NA	A0A088CBI5	Shigella_phage	100.0	1.3e-56
WP_106425302.1|4314157_4314229_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106889577.1|4314198_4314255_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000930323.1|4314456_4314795_-	hypothetical protein	NA	K7PJW2	Enterobacteria_phage	93.8	2.0e-56
WP_000256293.1|4314763_4315102_-	hypothetical protein	NA	A0A0N7BZP1	Escherichia_phage	97.3	7.3e-54
WP_000846392.1|4315810_4316518_-	helix-turn-helix transcriptional regulator	NA	A0A0N7C1P9	Escherichia_phage	99.6	6.1e-127
4315471:4315488	attR	TGTGTTGCACCAGCGGGT	NA	NA	NA	NA
WP_001054988.1|4316628_4316853_+	helix-turn-helix domain-containing protein	NA	A0A0N7C1T6	Escherichia_phage	100.0	1.2e-36
WP_000084294.1|4316968_4317265_+	hypothetical protein	NA	A0A088CBI6	Shigella_phage	96.9	1.7e-46
WP_000438870.1|4317279_4317498_+	hypothetical protein	NA	A0A088CC17	Shigella_phage	100.0	1.1e-21
WP_024173690.1|4317518_4318595_+	DNA-binding protein	NA	V5URT9	Shigella_phage	97.8	6.5e-205
WP_000790395.1|4318601_4319342_+	ATP-binding protein	NA	V5UQI5	Shigella_phage	100.0	7.2e-139
WP_000450880.1|4319367_4320138_+	DUF1627 domain-containing protein	NA	A0A088CE47	Shigella_phage	100.0	6.6e-135
WP_001151119.1|4320152_4320584_+	DUF977 family protein	NA	A0A088CBK9	Shigella_phage	100.0	2.5e-75
WP_000060692.1|4320616_4321291_-	DUF4145 domain-containing protein	NA	V5URE2	Shigella_phage	100.0	1.3e-123
WP_000354190.1|4321289_4321535_+	hypothetical protein	NA	A0A088CC19	Shigella_phage	100.0	6.2e-39
WP_001240641.1|4321582_4321888_-	HigA family addiction module antidote protein	NA	A0A2L1IV52	Escherichia_phage	100.0	3.4e-50
WP_000597785.1|4321887_4322166_-	hypothetical protein	NA	A0A2L1IV28	Escherichia_phage	97.8	2.2e-48
WP_077166530.1|4322504_4323227_+	hypothetical protein	NA	A0A088CD42	Shigella_phage	61.4	7.4e-72
WP_106889516.1|4323281_4323692_+	recombination protein NinB	NA	A0A088CBP6	Shigella_phage	97.8	3.0e-70
WP_077166529.1|4323688_4323880_+	NinE family protein	NA	A0A0P0ZDL7	Stx2-converting_phage	86.0	4.4e-24
WP_000002238.1|4323903_4324194_+	DUF1364 domain-containing protein	NA	A0A088CE53	Shigella_phage	99.0	8.4e-51
WP_001008117.1|4324190_4324553_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A088CBJ1	Shigella_phage	100.0	6.4e-64
WP_000992060.1|4324552_4324747_+	protein ninH	NA	A0A088CC23	Shigella_phage	100.0	1.4e-30
WP_001204860.1|4324739_4325120_+	antitermination protein	NA	A0A088CD47	Shigella_phage	99.2	4.0e-69
WP_106889517.1|4325252_4325846_+	hypothetical protein	NA	V5UT42	Shigella_phage	99.0	4.5e-107
WP_000691354.1|4326419_4327367_+	Shiga toxin Stx1 subunit A	NA	Q777W4	Enterobacteria_phage	100.0	3.2e-171
WP_000752026.1|4327376_4327646_+	Shiga toxin Stx1a subunit B	NA	Q7AYI7	Enterobacteria_phage	100.0	1.6e-43
WP_106889519.1|4328150_4330091_+	SASA family carbohydrate esterase	NA	A0A2L1IV62	Escherichia_phage	98.6	0.0e+00
WP_000142786.1|4330224_4330404_+	DUF1378 family protein	NA	A0A088CBQ0	Shigella_phage	94.9	3.2e-24
WP_001290230.1|4330444_4330690_+	DUF826 domain-containing protein	NA	A0A0P0ZGR2	Escherichia_phage	100.0	8.8e-17
WP_000284506.1|4330767_4330983_+|holin	holin	holin	Q9ZWW2	Enterobacteria_phage	100.0	6.9e-34
WP_106889520.1|4330987_4331521_+	lysozyme	NA	A0A2L1IV49	Escherichia_phage	98.3	1.6e-100
WP_106889521.1|4331795_4332395_+	hypothetical protein	NA	A0A088CD55	Shigella_phage	98.9	5.0e-106
WP_158708408.1|4332366_4332516_+	hypothetical protein	NA	A0A0P0ZFU6	Escherichia_phage	95.9	9.1e-17
WP_106889522.1|4332523_4332961_+|lysis	lysis protein	lysis	A0A088CBQ1	Shigella_phage	97.2	9.4e-70
WP_106889523.1|4333162_4333705_+	Rha family transcriptional regulator	NA	A0A088CBJ5	Shigella_phage	99.4	2.4e-99
WP_001086073.1|4334228_4335035_+|terminase	terminase	terminase	A0A0P0ZG40	Escherichia_phage	100.0	1.3e-133
WP_106889524.1|4335015_4336722_+|terminase	terminase	terminase	A0A0H4IT14	Shigella_phage	99.5	0.0e+00
WP_106889525.1|4336721_4338866_+|portal	portal protein	portal	A0A0P0ZGR1	Escherichia_phage	99.9	0.0e+00
WP_106889526.1|4339022_4340030_+	hypothetical protein	NA	A0A0P0ZGF7	Escherichia_phage	94.3	4.5e-168
WP_000214467.1|4340053_4341268_+|capsid	N4-gp56 family major capsid protein	capsid	A0A0N7KZY1	Escherichia_phage	100.0	1.7e-233
WP_001140440.1|4341322_4341712_+	hypothetical protein	NA	A0A0H4IQ95	Shigella_phage	100.0	1.3e-62
WP_001290743.1|4341762_4342224_+	hypothetical protein	NA	A0A2R2Z354	Escherichia_phage	100.0	7.8e-75
WP_052920643.1|4342207_4342771_+	hypothetical protein	NA	A0A0P0ZGG2	Escherichia_phage	99.5	1.2e-101
WP_000207918.1|4342770_4343421_+	hypothetical protein	NA	A0A0H4J3F2	Shigella_phage	100.0	3.5e-121
WP_106889527.1|4343417_4345199_+|tail	phage tail protein	tail	A0A1I9LJS9	Stx_converting_phage	99.2	1.3e-61
WP_052920641.1|4345267_4345939_+	DUF4376 domain-containing protein	NA	S5MBX6	Escherichia_phage	83.9	1.5e-106
WP_052920640.1|4346017_4347643_+	hypothetical protein	NA	A0A0H4IT21	Shigella_phage	98.0	0.0e+00
WP_106889528.1|4347639_4348992_+	DUF1983 domain-containing protein	NA	A0A2R2Z364	Escherichia_phage	96.4	4.6e-192
WP_158708409.1|4348952_4349324_+	hypothetical protein	NA	S5MW25	Escherichia_phage	94.3	5.2e-61
WP_106889530.1|4349719_4350121_+	hypothetical protein	NA	A0A088CC37	Shigella_phage	99.2	6.0e-71
WP_000509482.1|4350212_4350869_+	hypothetical protein	NA	A0A0P0ZGF6	Escherichia_phage	100.0	5.1e-104
WP_000455647.1|4350871_4351318_+	hypothetical protein	NA	A0A088CBR0	Shigella_phage	100.0	8.1e-77
WP_000540391.1|4351328_4351580_+|bacteriocin	bacteriocin	bacteriocin	A0A2R2Z351	Escherichia_phage	100.0	7.9e-13
WP_106889531.1|4351590_4352856_+	hypothetical protein	NA	A0A088CBK4	Shigella_phage	91.7	3.4e-205
>prophage 9
NZ_CP027452	Escherichia coli strain 2014C-3338 chromosome, complete genome	4799014	4361739	4366446	4799014		Shigella_phage(36.36%)	11	NA	NA
WP_106889532.1|4361739_4362084_-	YgiW/YdeI family stress tolerance OB fold protein	NA	A0A1I9LJU6	Stx_converting_phage	96.5	2.8e-53
WP_033811247.1|4362203_4362416_-	type I toxin-antitoxin system Hok family toxin	NA	A0A0P0ZAX5	Stx2-converting_phage	61.4	1.6e-14
WP_032286200.1|4362460_4362697_+	hypothetical protein	NA	Q7Y2Q9	Escherichia_phage	75.4	1.8e-19
WP_106889533.1|4362649_4363285_-	DUF551 domain-containing protein	NA	A5VWB3	Enterobacteria_phage	86.6	7.6e-36
WP_106889534.1|4363288_4363576_-	hypothetical protein	NA	A0A1I9LJM1	Stx_converting_phage	97.9	2.3e-48
WP_106889535.1|4363577_4363796_-	DUF4014 family protein	NA	A0A1I9LJM2	Stx_converting_phage	91.7	3.1e-29
WP_106889536.1|4364166_4364751_-	ead/Ea22-like family protein	NA	A0A088CC42	Shigella_phage	95.9	4.9e-74
WP_000020910.1|4364737_4365022_-	DUF4752 family protein	NA	A0A088CD82	Shigella_phage	98.9	4.7e-46
WP_000763355.1|4365018_4365240_-	TraR/DksA family transcriptional regulator	NA	V5USD3	Shigella_phage	98.6	2.9e-35
WP_106889537.1|4365287_4365917_-	phage antirepressor Ant	NA	A0A088CBR4	Shigella_phage	96.2	1.2e-110
WP_000213043.1|4366332_4366446_-	dimethylsulfoxide reductase	NA	A0A077SL61	Escherichia_phage	72.0	2.1e-05
>prophage 10
NZ_CP027452	Escherichia coli strain 2014C-3338 chromosome, complete genome	4799014	4624728	4698672	4799014	terminase,integrase,holin,transposase,protease,head,tail,capsid	Stx2-converting_phage(27.66%)	76	4687222:4687236	4695416:4695430
WP_000422061.1|4624728_4625778_-|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	32.0	3.5e-22
WP_000559277.1|4625997_4626756_+	YciK family oxidoreductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	23.4	4.4e-06
WP_001278883.1|4626752_4627343_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_001563176.1|4627394_4627703_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001563175.1|4627713_4628715_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001291206.1|4628884_4629760_-	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA	NA
WP_106889550.1|4629970_4631866_-	DUF2207 domain-containing protein	NA	NA	NA	NA	NA
WP_001285692.1|4632511_4633393_-	5'-3' exoribonuclease	NA	NA	NA	NA	NA
WP_001700591.1|4633530_4633575_+	trp operon leader peptide	NA	NA	NA	NA	NA
WP_001194623.1|4633666_4635229_+	anthranilate synthase component I	NA	NA	NA	NA	NA
WP_000763524.1|4635228_4636824_+	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	NA	A0A0N7IRD9	Acinetobacter_phage	38.5	1.7e-52
WP_052920668.1|4636827_4638186_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	NA	A0A0P0IR83	Acinetobacter_phage	40.7	8.6e-37
WP_106889551.1|4638197_4639391_+	tryptophan synthase subunit beta	NA	NA	NA	NA	NA
WP_001563169.1|4639390_4640197_+	tryptophan synthase subunit alpha	NA	NA	NA	NA	NA
WP_042103539.1|4640578_4640758_+	general stress protein	NA	NA	NA	NA	NA
WP_042103537.1|4640843_4641344_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_001079498.1|4641389_4641896_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_001049902.1|4643502_4644174_-	DUF4376 domain-containing protein	NA	S5MBX6	Escherichia_phage	83.9	2.5e-106
WP_001270059.1|4645580_4646204_-	Ail/Lom family outer membrane beta-barrel protein	NA	A0A1U8QHD6	Enterobacteria_phage	59.9	9.0e-66
WP_106889552.1|4646272_4649968_-	DUF1983 domain-containing protein	NA	Q6H9T2	Enterobacteria_phage	84.1	0.0e+00
WP_072121435.1|4650882_4651515_-|tail	tail assembly protein	tail	Q9EYE5	Enterobacteria_phage	90.5	4.3e-100
WP_044808579.1|4651460_4652204_-|tail	phage tail protein	tail	S5MQI8	Escherichia_phage	98.0	5.9e-149
WP_001373202.1|4652214_4652913_-|tail	phage minor tail protein L	tail	S5M7Q4	Escherichia_phage	97.4	1.2e-130
WP_000343411.1|4652912_4653254_-|tail	phage tail protein	tail	A0A0P0ZDL9	Stx2-converting_phage	82.3	6.9e-52
WP_106884700.1|4653246_4656489_-|tail	phage tail tape measure protein	tail	A0A0P0ZCJ4	Stx2-converting_phage	87.9	0.0e+00
WP_122993267.1|4656536_4656746_-	DUF4035 domain-containing protein	NA	H6WZM0	Escherichia_phage	98.6	1.5e-33
WP_000710934.1|4656841_4657216_-|tail	tail assembly protein	tail	A0A0P0ZE84	Stx2-converting_phage	99.2	7.8e-65
WP_106889553.1|4657230_4657947_-|tail	phage tail protein	tail	A0A0P0ZDV1	Stx2-converting_phage	99.2	1.0e-126
WP_000133388.1|4658012_4658357_-	DUF3168 domain-containing protein	NA	A0A0P0ZC17	Stx2-converting_phage	100.0	1.4e-57
WP_000573391.1|4658353_4658800_-	HK97 gp10 family phage protein	NA	A0A0N7KZI9	Stx2-converting_phage	100.0	5.2e-76
WP_001007905.1|4658796_4659147_-|head	phage head closure protein	head	A0A0P0ZB28	Stx2-converting_phage	100.0	1.6e-59
WP_000125990.1|4659156_4659483_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A0P0ZBH1	Stx2-converting_phage	100.0	9.2e-54
WP_001063099.1|4662011_4662233_-	hypothetical protein	NA	B6DZA0	Enterobacteria_phage	100.0	5.8e-36
WP_000172990.1|4662277_4664215_-|capsid	phage major capsid protein	capsid	Q6H9U8	Enterobacteria_phage	99.7	0.0e+00
WP_106879091.1|4664278_4665940_-|terminase	terminase large subunit	terminase	Q6H9U9	Enterobacteria_phage	99.5	0.0e+00
WP_000958387.1|4665936_4666500_-|terminase	terminase small subunit	terminase	A0A0N7KZJ8	Stx2-converting_phage	100.0	8.1e-90
WP_000829192.1|4666789_4667155_-	HNH endonuclease	NA	B6ETE5	Enterobacteria_phage	96.7	1.6e-62
WP_106889554.1|4667196_4667397_+	DUF3950 domain-containing protein	NA	H6WZK6	Escherichia_phage	95.5	3.7e-29
WP_000828070.1|4667528_4667855_-	TonB family protein	NA	H6WZK5	Escherichia_phage	98.1	6.3e-55
WP_072032668.1|4668255_4668441_-	hypothetical protein	NA	A0A0P0ZCT3	Stx2-converting_phage	98.4	2.7e-18
WP_072095843.1|4668809_4668992_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001092904.1|4669148_4669682_-	lysozyme	NA	G9L6J6	Escherichia_phage	96.0	3.6e-100
WP_106889555.1|4669718_4670057_-	YdfR family protein	NA	Q08JA0	Stx2-converting_phage	87.3	1.2e-48
WP_000284506.1|4670060_4670276_-|holin	holin	holin	Q9ZWW2	Enterobacteria_phage	100.0	6.9e-34
WP_001290207.1|4670351_4670624_-	DUF826 domain-containing protein	NA	A0A0P0ZC09	Stx2-converting_phage	95.6	1.3e-21
WP_000142780.1|4670664_4670844_-	DUF1378 family protein	NA	A0A2R2Z345	Escherichia_phage	93.2	5.4e-24
WP_106889556.1|4670978_4672943_-	SASA family carbohydrate esterase	NA	A0A0P0ZBH7	Stx2-converting_phage	78.9	1.9e-295
WP_106889557.1|4674807_4675533_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000271631.1|4676229_4676658_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_106889558.1|4677138_4678197_-	site-specific DNA-methyltransferase	NA	S5MDR0	Escherichia_phage	98.9	1.5e-206
WP_000917750.1|4678347_4678545_-	hypothetical protein	NA	S5MQK8	Escherichia_phage	98.5	1.0e-28
WP_000342737.1|4678718_4679432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001064918.1|4679685_4680351_-	antiterminator	NA	I6PDF8	Cronobacter_phage	52.0	1.6e-60
WP_000904135.1|4680343_4680706_-	RusA family crossover junction endodeoxyribonuclease	NA	V5URS4	Shigella_phage	61.9	9.0e-34
WP_032347855.1|4681769_4682039_-	hypothetical protein	NA	I6PCV7	Cronobacter_phage	50.8	3.6e-11
WP_000042395.1|4682908_4683226_+	DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000882662.1|4683328_4683541_-	type I toxin-antitoxin system Hok family toxin	NA	A0A0U2QV81	Escherichia_phage	95.7	2.5e-28
WP_000211993.1|4683755_4684307_-	ORF6N domain-containing protein	NA	A0A0N7C203	Escherichia_phage	53.3	5.5e-43
WP_000215512.1|4684658_4684844_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047083545.1|4685693_4686434_-	ATP-binding protein	NA	A0A088CBP4	Shigella_phage	82.3	1.2e-112
WP_106889560.1|4686440_4687478_-	hypothetical protein	NA	U5P0A0	Shigella_phage	61.2	4.1e-55
4687222:4687236	attL	TTTTCGCTACGCAAA	NA	NA	NA	NA
WP_000705131.1|4687458_4687980_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000476991.1|4687963_4688191_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_001003380.1|4688268_4688676_+	helix-turn-helix domain-containing protein	NA	I6PD69	Cronobacter_phage	45.4	5.5e-24
WP_000380317.1|4688865_4689018_+	DUF1391 family protein	NA	M4QQ57	Salicola_phage	53.2	5.1e-07
WP_001365839.1|4689029_4689398_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000450222.1|4690182_4690371_+	cell division inhibitor	NA	NA	NA	NA	NA
WP_000092839.1|4690367_4690556_+	DUF1482 family protein	NA	NA	NA	NA	NA
WP_106889561.1|4690651_4693123_+	exonuclease	NA	A0A192Y6E0	Salmonella_phage	56.6	2.0e-55
WP_000113183.1|4693187_4693436_+	excisionase	NA	NA	NA	NA	NA
WP_000113693.1|4693413_4694544_+|integrase	tyrosine-type recombinase/integrase	integrase	O21940	Phage_21	51.4	4.0e-104
WP_042106135.1|4694589_4695243_-	outer membrane protein OmpW	NA	NA	NA	NA	NA
WP_000028546.1|4695599_4696343_+	UPF0259 family protein	NA	NA	NA	NA	NA
4695416:4695430	attR	TTTTCGCTACGCAAA	NA	NA	NA	NA
WP_000808667.1|4696372_4696912_+	septation protein A	NA	NA	NA	NA	NA
WP_042106136.1|4697016_4697436_+	acyl-CoA thioester hydrolase YciA	NA	NA	NA	NA	NA
WP_101774106.1|4697416_4698672_-|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	33.9	3.1e-17
