assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003017935.1_ASM301793v1	NZ_CP027340	Escherichia coli strain 2015C-3121 chromosome, complete genome	1	73476-74116	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,csa3,DEDDh,DinG,c2c9_V-U4	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	10,10,10	10	TypeI-E	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,csa3,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|254aa|up_9|NZ_CP027340.1_65288_66050_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP027340.1_66030_67080_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP027340.1_67076_67556_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP027340.1_67555_68266_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP027340.1_68284_68596_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP027340.1_68789_69113_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP027340.1_69162_69768_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP027340.1_69767_71195_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP027340.1_71196_72105_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP027340.1_72356_73394_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP027340.1_74212_74506_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NZ_CP027340.1_74505_75426_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP027340.1_75422_76073_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP027340.1_76054_76801_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|358aa|down_4|NZ_CP027340.1_76811_77885_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|178aa|down_5|NZ_CP027340.1_77899_78433_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|521aa|down_6|NZ_CP027340.1_78429_79992_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|209aa|down_7|NZ_CP027340.1_80089_80716_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas3|693aa|down_8|NZ_CP027340.1_80709_82788_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_9|NZ_CP027340.1_82982_83135_-	pfam01848, HOK_GEF, Hok/gef family
GCF_003017935.1_ASM301793v1	NZ_CP027340	Escherichia coli strain 2015C-3121 chromosome, complete genome	2	99769-99982	2,2,2	PILER-CR,CRT,CRISPRCasFinder	no	cas3	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,csa3,DEDDh,DinG,c2c9_V-U4	Unclear	GGCGGTTTATCCCCGCTGGCGCGGGGAACTC,GGCGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	31,31,29	0	0	NA	NA	I-E:I-E:I-E	3,3,3	3	Unclear	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,csa3,DEDDh,DinG,c2c9_V-U4	NA,NA|47aa|down_1|NZ_CP027340.1_101131_101272_+	NA|424aa|up_9|NZ_CP027340.1_88477_89749_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NZ_CP027340.1_89739_90000_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NZ_CP027340.1_90016_90592_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NZ_CP027340.1_90739_91600_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP027340.1_91596_92376_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_4|NZ_CP027340.1_92353_93691_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP027340.1_93784_95239_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP027340.1_95308_96094_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP027340.1_96412_97690_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP027340.1_97716_99195_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP027340.1_100321_100993_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|47aa|down_1|NZ_CP027340.1_101131_101272_+	NA	NA|291aa|down_2|NZ_CP027340.1_101285_102158_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_3|NZ_CP027340.1_102217_103516_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_4|NZ_CP027340.1_103603_105241_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_5|NZ_CP027340.1_105468_106260_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_6|NZ_CP027340.1_106330_106666_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_7|NZ_CP027340.1_106665_106914_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_8|NZ_CP027340.1_106991_109226_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_9|NZ_CP027340.1_109273_110575_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
GCF_003017935.1_ASM301793v1	NZ_CP027340	Escherichia coli strain 2015C-3121 chromosome, complete genome	3	2998985-2999130	3	CRISPRCasFinder	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,csa3,DEDDh,DinG,c2c9_V-U4	Orphan	CGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCG	53	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,csa3,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|50aa|up_9|NZ_CP027340.1_2987188_2987338_+	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ	NA|258aa|up_8|NZ_CP027340.1_2987504_2988278_+	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|230aa|up_7|NZ_CP027340.1_2988277_2988967_+	PRK09421, modB, molybdate ABC transporter permease subunit	NA|353aa|up_6|NZ_CP027340.1_2988969_2990028_+	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|273aa|up_5|NZ_CP027340.1_2990028_2990847_-	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|332aa|up_4|NZ_CP027340.1_2991001_2991997_+	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|318aa|up_3|NZ_CP027340.1_2992037_2992991_-	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|344aa|up_2|NZ_CP027340.1_2993194_2994226_+	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|478aa|up_1|NZ_CP027340.1_2995078_2996512_+	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|754aa|up_0|NZ_CP027340.1_2996694_2998956_+	PRK11413, PRK11413, putative hydratase; Provisional	NA|428aa|down_0|NZ_CP027340.1_2999189_3000473_-	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|159aa|down_1|NZ_CP027340.1_3000624_3001101_-	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|430aa|down_2|NZ_CP027340.1_3001159_3002449_-	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|347aa|down_3|NZ_CP027340.1_3002535_3003576_+	PRK15108, PRK15108, biotin synthase; Provisional	NA|385aa|down_4|NZ_CP027340.1_3003572_3004727_+	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|252aa|down_5|NZ_CP027340.1_3004713_3005469_+	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|226aa|down_6|NZ_CP027340.1_3005461_3006139_+	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|674aa|down_7|NZ_CP027340.1_3006717_3008739_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|303aa|down_8|NZ_CP027340.1_3008930_3009839_-	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|330aa|down_9|NZ_CP027340.1_3010235_3011225_+	PRK00164, moaA, GTP 3',8-cyclase MoaA
