assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003014775.1_ASM301477v1	NZ_CP027804	Aeromonas hydrophila strain KN-Mc-1R2 chromosome, complete genome	1	514980-515093	1	CRISPRCasFinder	no		RT,cas3,DEDDh,WYL,DinG,csa3	Orphan	GGAGAGGGAGAAGTGCAGACTGGCCAGCAGAGTCATGATGGAT	43	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,WYL,DinG,csa3	NA,NA|111aa|down_6|NZ_CP027804.1_522087_522420_+	NA|689aa|up_9|NZ_CP027804.1_504275_506342_-	COG1444, COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]	NA|104aa|up_8|NZ_CP027804.1_506338_506650_-	pfam10115, HlyU, Transcriptional activator HlyU	NA|101aa|up_7|NZ_CP027804.1_506691_506994_+	cd19945, Fer2_BFD, bacterioferritin-associated ferredoxin (BFD) [2Fe-2S]-binding domain	NA|160aa|up_6|NZ_CP027804.1_507136_507616_+	cd00907, Bacterioferritin, Bacterioferritin, ferritin-like diiron-binding domain	NA|702aa|up_5|NZ_CP027804.1_507818_509924_+	pfam05960, DUF885, Bacterial protein of unknown function (DUF885)	NA|188aa|up_4|NZ_CP027804.1_509907_510471_+	PRK05234, mgsA, methylglyoxal synthase; Validated	NA|196aa|up_3|NZ_CP027804.1_510531_511119_-	pfam14163, SieB, Super-infection exclusion protein B	NA|378aa|up_2|NZ_CP027804.1_511364_512498_+	COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]	NA|353aa|up_1|NZ_CP027804.1_512590_513649_-	PRK11096, ansB, L-asparaginase II; Provisional	NA|65aa|up_0|NZ_CP027804.1_513781_513976_-	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|316aa|down_0|NZ_CP027804.1_515296_516244_+	PRK09492, treR, HTH-type transcriptional regulator TreR	NA|507aa|down_1|NZ_CP027804.1_516345_517866_+	PRK11007, PRK11007, PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional	NA|554aa|down_2|NZ_CP027804.1_517934_519596_+	PRK10933, PRK10933, trehalose-6-phosphate hydrolase; Provisional	NA|202aa|down_3|NZ_CP027804.1_519599_520205_+	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|153aa|down_4|NZ_CP027804.1_520323_520782_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|292aa|down_5|NZ_CP027804.1_520876_521752_+	PRK10532, PRK10532, threonine and homoserine efflux system; Provisional	NA|111aa|down_6|NZ_CP027804.1_522087_522420_+	NA	NA|477aa|down_7|NZ_CP027804.1_522576_524007_-	PRK13473, PRK13473, aminobutyraldehyde dehydrogenase	NA|272aa|down_8|NZ_CP027804.1_524036_524852_-	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]	NA|323aa|down_9|NZ_CP027804.1_524962_525931_-	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]
GCF_003014775.1_ASM301477v1	NZ_CP027804	Aeromonas hydrophila strain KN-Mc-1R2 chromosome, complete genome	2	806899-807015	2	CRISPRCasFinder	no		RT,cas3,DEDDh,WYL,DinG,csa3	Orphan	GCTCACGCCTAACCAAATGAAAAACCGTG	29	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,WYL,DinG,csa3	NA|147aa|up_5|NZ_CP027804.1_801987_802428_+,NA	NA|258aa|up_9|NZ_CP027804.1_798734_799508_+	PRK15066, PRK15066, inner membrane transport permease; Provisional	NA|384aa|up_8|NZ_CP027804.1_799742_800894_+	COG1775, HgdB, Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB [Amino acid transport and metabolism]	NA|261aa|up_7|NZ_CP027804.1_800903_801686_+	TIGR00241, Uncharacterized_protein_MJ0004, CoA-substrate-specific enzyme activase, putative	NA|87aa|up_6|NZ_CP027804.1_801682_801943_+	pfam11823, DUF3343, Protein of unknown function (DUF3343)	NA|147aa|up_5|NZ_CP027804.1_801987_802428_+	NA	NA|176aa|up_4|NZ_CP027804.1_802429_802957_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|286aa|up_3|NZ_CP027804.1_803021_803879_-	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed	NA|265aa|up_2|NZ_CP027804.1_804066_804861_-	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed	NA|170aa|up_1|NZ_CP027804.1_804857_805367_-	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]	NA|500aa|up_0|NZ_CP027804.1_805378_806878_-	PRK11623, pcnB, poly(A) polymerase I; Provisional	NA|301aa|down_0|NZ_CP027804.1_807110_808013_-	TIGR03838, queuosine_YadB, glutamyl-queuosine tRNA(Asp) synthetase	NA|150aa|down_1|NZ_CP027804.1_808132_808582_-	PRK10778, dksA, RNA polymerase-binding protein DksA	NA|248aa|down_2|NZ_CP027804.1_808701_809445_-	PRK00347, PRK00347, DNA/RNA nuclease SfsA	NA|180aa|down_3|NZ_CP027804.1_809487_810027_-	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase	NA|816aa|down_4|NZ_CP027804.1_810171_812619_+	PRK11664, PRK11664, ATP-dependent RNA helicase HrpB; Provisional	NA|774aa|down_5|NZ_CP027804.1_812692_815014_+	TIGR02071, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1B	NA|134aa|down_6|NZ_CP027804.1_815056_815458_+	cd08352, VOC_Bs_YwkD_like, vicinal oxygen chelate (VOC) family protein  Bacillus subtilis YwkD and similar proteins	NA|107aa|down_7|NZ_CP027804.1_815557_815878_-	PRK10650, PRK10650, multidrug/spermidine efflux SMR transporter subunit MdtI	NA|152aa|down_8|NZ_CP027804.1_815865_816321_-	PRK10452, PRK10452, multidrug/spermidine efflux SMR transporter subunit MdtJ	NA|294aa|down_9|NZ_CP027804.1_816477_817359_+	COG0583, LysR, Transcriptional regulator [Transcription]
GCF_003014775.1_ASM301477v1	NZ_CP027804	Aeromonas hydrophila strain KN-Mc-1R2 chromosome, complete genome	3	976275-976366	3	CRISPRCasFinder	no		RT,cas3,DEDDh,WYL,DinG,csa3	Orphan	CACGGCGGTTGCTGCGGTGGTGG	23	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,WYL,DinG,csa3	NA|229aa|up_1|NZ_CP027804.1_974679_975366_-,NA|290aa|down_4|NZ_CP027804.1_980231_981101_-,NA|112aa|down_5|NZ_CP027804.1_981214_981550_-	NA|664aa|up_9|NZ_CP027804.1_964973_966965_-	PRK08125, PRK08125, bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA	NA|327aa|up_8|NZ_CP027804.1_966961_967942_-	PRK10714, PRK10714, undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional	NA|379aa|up_7|NZ_CP027804.1_967948_969085_-	PRK11658, PRK11658, UDP-4-amino-4-deoxy-L-arabinose aminotransferase	NA|449aa|up_6|NZ_CP027804.1_969305_970652_+	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|81aa|up_5|NZ_CP027804.1_971079_971322_-	PRK04966, PRK04966, hypothetical protein; Provisional	NA|385aa|up_4|NZ_CP027804.1_971411_972566_+	pfam17178, MASE5, Membrane-associated sensor	NA|361aa|up_3|NZ_CP027804.1_972547_973630_-	PRK10985, PRK10985, putative hydrolase; Provisional	NA|300aa|up_2|NZ_CP027804.1_973598_974498_-	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]	NA|229aa|up_1|NZ_CP027804.1_974679_975366_-	NA	NA|69aa|up_0|NZ_CP027804.1_975405_975612_+	COG3529, COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only]	NA|72aa|down_0|NZ_CP027804.1_976461_976677_-	pfam04102, SlyX, SlyX	NA|323aa|down_1|NZ_CP027804.1_976691_977660_-	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|269aa|down_2|NZ_CP027804.1_977779_978586_+	PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|469aa|down_3|NZ_CP027804.1_978736_980143_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|290aa|down_4|NZ_CP027804.1_980231_981101_-	NA	NA|112aa|down_5|NZ_CP027804.1_981214_981550_-	NA	NA|114aa|down_6|NZ_CP027804.1_981676_982018_-	pfam11169, DUF2956, Protein of unknown function (DUF2956)	NA|613aa|down_7|NZ_CP027804.1_982104_983943_-	TIGR01530, Probable_5'-nucleotidase, NAD pyrophosphatase/5'-nucleotidase NadN	NA|514aa|down_8|NZ_CP027804.1_984175_985717_-	cd01948, EAL, EAL domain	NA|285aa|down_9|NZ_CP027804.1_985895_986750_-	COG4395, COG4395, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_003014775.1_ASM301477v1	NZ_CP027804	Aeromonas hydrophila strain KN-Mc-1R2 chromosome, complete genome	4	1422076-1422180	4	CRISPRCasFinder	no		RT,cas3,DEDDh,WYL,DinG,csa3	Orphan	CTTGGAATTTGTCGCTCATATCTTC	25	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,WYL,DinG,csa3	NA|108aa|up_6|NZ_CP027804.1_1414656_1414980_+,NA	NA|115aa|up_9|NZ_CP027804.1_1410831_1411176_+	PRK10824, PRK10824, Grx4 family monothiol glutaredoxin	NA|438aa|up_8|NZ_CP027804.1_1411253_1412567_-	COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]	NA|678aa|up_7|NZ_CP027804.1_1412626_1414660_+	pfam13582, Reprolysin_3, Metallo-peptidase family M12B Reprolysin-like	NA|108aa|up_6|NZ_CP027804.1_1414656_1414980_+	NA	NA|213aa|up_5|NZ_CP027804.1_1415161_1415800_+	PRK05679, PRK05679, pyridoxal 5'-phosphate synthase	NA|205aa|up_4|NZ_CP027804.1_1415838_1416453_+	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|540aa|up_3|NZ_CP027804.1_1416452_1418072_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|174aa|up_2|NZ_CP027804.1_1418104_1418626_+	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|377aa|up_1|NZ_CP027804.1_1418685_1419816_-	COG2850, COG2850, Uncharacterized conserved protein [Function unknown]	NA|457aa|up_0|NZ_CP027804.1_1419981_1421352_-	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|369aa|down_0|NZ_CP027804.1_1422386_1423493_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|156aa|down_1|NZ_CP027804.1_1423651_1424119_-	cd03675, Nudix_Hydrolase_2, Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function	NA|314aa|down_2|NZ_CP027804.1_1424214_1425156_-	cd02566, PseudoU_synth_RluE, Pseudouridine synthase, Escherichia coli RluE	NA|256aa|down_3|NZ_CP027804.1_1425233_1426001_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|104aa|down_4|NZ_CP027804.1_1425994_1426306_-	COG1445, FrwB, Phosphotransferase system fructose-specific component IIB [Carbohydrate transport and metabolism]	NA|469aa|down_5|NZ_CP027804.1_1426572_1427979_-	PRK09556, uhpT, hexose-6-phosphate:phosphate antiporter	NA|138aa|down_6|NZ_CP027804.1_1428467_1428881_-	cd17030, T3SC_IA_SycH-like, Class IA type III secretion system chaperone protein, similar to Yersinia pestis SycH	NA|474aa|down_7|NZ_CP027804.1_1428889_1430311_-	pfam09013, YopH_N, YopH, N-terminal	NA|636aa|down_8|NZ_CP027804.1_1430504_1432412_-	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional	NA|172aa|down_9|NZ_CP027804.1_1433043_1433559_-	PRK08118, PRK08118, DNA topology modulation protein
GCF_003014775.1_ASM301477v1	NZ_CP027804	Aeromonas hydrophila strain KN-Mc-1R2 chromosome, complete genome	5	1436060-1436172	5	CRISPRCasFinder	no		RT,cas3,DEDDh,WYL,DinG,csa3	Orphan	GGTTTGCTGGTGAGCGGTGACGATATGGC	29	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,WYL,DinG,csa3	NA|88aa|up_0|NZ_CP027804.1_1435617_1435881_-,NA|263aa|down_3|NZ_CP027804.1_1440411_1441200_-,NA|96aa|down_4|NZ_CP027804.1_1441291_1441579_-,NA|50aa|down_6|NZ_CP027804.1_1444401_1444551_+,NA|233aa|down_7|NZ_CP027804.1_1444625_1445324_-	NA|256aa|up_9|NZ_CP027804.1_1425233_1426001_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|104aa|up_8|NZ_CP027804.1_1425994_1426306_-	COG1445, FrwB, Phosphotransferase system fructose-specific component IIB [Carbohydrate transport and metabolism]	NA|469aa|up_7|NZ_CP027804.1_1426572_1427979_-	PRK09556, uhpT, hexose-6-phosphate:phosphate antiporter	NA|138aa|up_6|NZ_CP027804.1_1428467_1428881_-	cd17030, T3SC_IA_SycH-like, Class IA type III secretion system chaperone protein, similar to Yersinia pestis SycH	NA|474aa|up_5|NZ_CP027804.1_1428889_1430311_-	pfam09013, YopH_N, YopH, N-terminal	NA|636aa|up_4|NZ_CP027804.1_1430504_1432412_-	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional	NA|172aa|up_3|NZ_CP027804.1_1433043_1433559_-	PRK08118, PRK08118, DNA topology modulation protein	NA|338aa|up_2|NZ_CP027804.1_1433643_1434657_-	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|159aa|up_1|NZ_CP027804.1_1435086_1435563_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|88aa|up_0|NZ_CP027804.1_1435617_1435881_-	NA	NA|346aa|down_0|NZ_CP027804.1_1436209_1437247_-	PRK10014, PRK10014, DNA-binding transcriptional repressor MalI; Provisional	NA|529aa|down_1|NZ_CP027804.1_1437520_1439107_+	PRK10110, PRK10110, PTS maltose transporter subunit IICB	NA|401aa|down_2|NZ_CP027804.1_1439181_1440384_+	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|263aa|down_3|NZ_CP027804.1_1440411_1441200_-	NA	NA|96aa|down_4|NZ_CP027804.1_1441291_1441579_-	NA	NA|629aa|down_5|NZ_CP027804.1_1441779_1443666_-	PRK10478, PRK10478, PTS fructose transporter subunit EIIC	NA|50aa|down_6|NZ_CP027804.1_1444401_1444551_+	NA	NA|233aa|down_7|NZ_CP027804.1_1444625_1445324_-	NA	NA|400aa|down_8|NZ_CP027804.1_1445371_1446571_-	PRK15131, PRK15131, mannose-6-phosphate isomerase; Provisional	NA|297aa|down_9|NZ_CP027804.1_1446685_1447576_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]
GCF_003014775.1_ASM301477v1	NZ_CP027804	Aeromonas hydrophila strain KN-Mc-1R2 chromosome, complete genome	6	1954113-1954252	6	CRISPRCasFinder	no	WYL	RT,cas3,DEDDh,WYL,DinG,csa3	Unclear	GCCACGCTCTGGGTCTCGATCACGGTGTTTTCGTTGCGATG	41	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,WYL,DinG,csa3	NA|187aa|up_8|NZ_CP027804.1_1943228_1943789_+,NA|366aa|up_7|NZ_CP027804.1_1944334_1945432_-,NA|191aa|up_0|NZ_CP027804.1_1953503_1954076_-,NA|150aa|down_2|NZ_CP027804.1_1959531_1959981_-,NA|1267aa|down_4|NZ_CP027804.1_1961063_1964864_+,NA|514aa|down_5|NZ_CP027804.1_1965077_1966619_-,NA|246aa|down_8|NZ_CP027804.1_1969072_1969810_-	NA|931aa|up_9|NZ_CP027804.1_1940301_1943094_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|187aa|up_8|NZ_CP027804.1_1943228_1943789_+	NA	NA|366aa|up_7|NZ_CP027804.1_1944334_1945432_-	NA	NA|355aa|up_6|NZ_CP027804.1_1945874_1946939_-	COG5621, COG5621, Predicted secreted hydrolase [General function prediction only]	NA|816aa|up_5|NZ_CP027804.1_1946935_1949383_-	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|227aa|up_4|NZ_CP027804.1_1949404_1950085_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|156aa|up_3|NZ_CP027804.1_1950282_1950750_+	pfam14267, DUF4357, Domain of unknown function (DUF4357)	NA|396aa|up_2|NZ_CP027804.1_1950874_1952062_-	PRK11102, PRK11102, Bcr/CflA family multidrug efflux MFS transporter	NA|428aa|up_1|NZ_CP027804.1_1952113_1953397_-	pfam09913, DUF2142, Predicted membrane protein (DUF2142)	NA|191aa|up_0|NZ_CP027804.1_1953503_1954076_-	NA	NA|273aa|down_0|NZ_CP027804.1_1955727_1956546_-	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein	NA|968aa|down_1|NZ_CP027804.1_1956545_1959449_-	cd14962, NHL_like_6, Uncharacterized NHL-repeat domain in bacterial proteins	NA|150aa|down_2|NZ_CP027804.1_1959531_1959981_-	NA	NA|162aa|down_3|NZ_CP027804.1_1960098_1960584_-	PRK05208, PRK05208, hypothetical protein; Provisional	NA|1267aa|down_4|NZ_CP027804.1_1961063_1964864_+	NA	NA|514aa|down_5|NZ_CP027804.1_1965077_1966619_-	NA	NA|355aa|down_6|NZ_CP027804.1_1966615_1967680_-	smart00482, POLAc, DNA polymerase A domain	NA|145aa|down_7|NZ_CP027804.1_1967666_1968101_-	PRK13159, PRK13159, cytochrome c-type biogenesis protein CcmE; Reviewed	NA|246aa|down_8|NZ_CP027804.1_1969072_1969810_-	NA	NA|169aa|down_9|NZ_CP027804.1_1969797_1970304_-	pfam05154, TM2, TM2 domain
GCF_003014775.1_ASM301477v1	NZ_CP027804	Aeromonas hydrophila strain KN-Mc-1R2 chromosome, complete genome	7	3830350-3830454	7	CRISPRCasFinder	no		RT,cas3,DEDDh,WYL,DinG,csa3	Orphan	CCATGCCGTTGCCTACCACCAGCA	24	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,WYL,DinG,csa3	NA|72aa|up_6|NZ_CP027804.1_3821804_3822020_+,NA|247aa|down_9|NZ_CP027804.1_3839490_3840231_-	NA|238aa|up_9|NZ_CP027804.1_3819307_3820021_-	pfam13723, Ketoacyl-synt_2, Beta-ketoacyl synthase, N-terminal domain	NA|155aa|up_8|NZ_CP027804.1_3820197_3820662_+	PRK09423, gldA, glycerol dehydrogenase; Provisional	NA|359aa|up_7|NZ_CP027804.1_3820680_3821757_+	pfam00891, Methyltransf_2, O-methyltransferase	NA|72aa|up_6|NZ_CP027804.1_3821804_3822020_+	NA	NA|252aa|up_5|NZ_CP027804.1_3822064_3822820_-	pfam01223, Endonuclease_NS, DNA/RNA non-specific endonuclease	NA|326aa|up_4|NZ_CP027804.1_3823062_3824040_-	COG1858, MauG, Cytochrome c peroxidase [Inorganic ion transport and metabolism]	NA|242aa|up_3|NZ_CP027804.1_3824489_3825215_+	cd03124, alpha_CA_prokaryotic_like, Carbonic anhydrase alpha, prokaryotic-like subfamily	NA|303aa|up_2|NZ_CP027804.1_3825290_3826199_-	pfam04227, Indigoidine_A, Indigoidine synthase A like protein	NA|364aa|up_1|NZ_CP027804.1_3826192_3827284_-	PRK09954, PRK09954, sugar kinase	NA|154aa|up_0|NZ_CP027804.1_3827429_3827891_-	pfam13806, Rieske_2, Rieske-like [2Fe-2S] domain	NA|274aa|down_0|NZ_CP027804.1_3830498_3831320_-	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|315aa|down_1|NZ_CP027804.1_3831424_3832369_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|500aa|down_2|NZ_CP027804.1_3832383_3833883_-	pfam13379, NMT1_2, NMT1-like family	NA|195aa|down_3|NZ_CP027804.1_3834179_3834764_-	pfam03861, ANTAR, ANTAR domain	NA|253aa|down_4|NZ_CP027804.1_3834903_3835662_-	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT)	NA|888aa|down_5|NZ_CP027804.1_3835658_3838322_-	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite	NA|169aa|down_6|NZ_CP027804.1_3838624_3839131_+	cd18098, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU	NA|33aa|down_7|NZ_CP027804.1_3839138_3839237_+	cd18098, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU	NA|39aa|down_8|NZ_CP027804.1_3839226_3839343_+	cd18098, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU	NA|247aa|down_9|NZ_CP027804.1_3839490_3840231_-	NA
GCF_003014775.1_ASM301477v1	NZ_CP027804	Aeromonas hydrophila strain KN-Mc-1R2 chromosome, complete genome	8	4105850-4105982	8	CRISPRCasFinder	no		RT,cas3,DEDDh,WYL,DinG,csa3	Orphan	CTGGTGTGGCTGAAGGATTTGATGAAGGAGCTGGTGAATCC	41	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,WYL,DinG,csa3	NA|211aa|up_2|NZ_CP027804.1_4101001_4101634_+,NA	NA|224aa|up_9|NZ_CP027804.1_4093674_4094346_+	COG1462, CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane]	NA|120aa|up_8|NZ_CP027804.1_4094357_4094717_+	COG4259, COG4259, Uncharacterized protein conserved in bacteria [Function unknown]	NA|217aa|up_7|NZ_CP027804.1_4094713_4095364_+	pfam05643, DUF799, Putative bacterial lipoprotein (DUF799)	NA|417aa|up_6|NZ_CP027804.1_4095577_4096828_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|431aa|up_5|NZ_CP027804.1_4096902_4098195_-	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|255aa|up_4|NZ_CP027804.1_4098359_4099124_-	cd16287, CphS_ImiS-like_MBL-B2, metallo-beta-lactamases, subclass B2; MBL-fold metallo-hydrolase domain	NA|462aa|up_3|NZ_CP027804.1_4099610_4100996_+	pfam13175, AAA_15, AAA ATPase domain	NA|211aa|up_2|NZ_CP027804.1_4101001_4101634_+	NA	NA|568aa|up_1|NZ_CP027804.1_4101861_4103565_-	PRK06565, PRK06565, amidase; Validated	NA|366aa|up_0|NZ_CP027804.1_4103691_4104789_-	PRK13551, PRK13551, agmatine deiminase; Provisional	NA|189aa|down_0|NZ_CP027804.1_4106124_4106691_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|374aa|down_1|NZ_CP027804.1_4106795_4107917_+	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain	NA|313aa|down_2|NZ_CP027804.1_4108121_4109060_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|153aa|down_3|NZ_CP027804.1_4109117_4109576_-	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|165aa|down_4|NZ_CP027804.1_4109638_4110133_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|113aa|down_5|NZ_CP027804.1_4110199_4110538_-	COG4538, COG4538, Uncharacterized conserved protein [Function unknown]	NA|530aa|down_6|NZ_CP027804.1_4110707_4112297_-	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|335aa|down_7|NZ_CP027804.1_4114637_4115642_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|485aa|down_8|NZ_CP027804.1_4115651_4117106_-	PRK10997, yieM, ATPase RavA stimulator ViaA	NA|549aa|down_9|NZ_CP027804.1_4117158_4118805_-	PRK13531, PRK13531, regulatory ATPase RavA; Provisional
GCF_003014775.1_ASM301477v1	NZ_CP027804	Aeromonas hydrophila strain KN-Mc-1R2 chromosome, complete genome	9	4227144-4227256	9	CRISPRCasFinder	no		RT,cas3,DEDDh,WYL,DinG,csa3	Orphan	TCGTCTCGCAGCAGGAGGCATCATGGATCTGATCGC	36	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,WYL,DinG,csa3	NA,NA|221aa|down_8|NZ_CP027804.1_4237835_4238498_-	NA|498aa|up_9|NZ_CP027804.1_4212276_4213770_-	cd07389, MPP_PhoD, Bacillus subtilis PhoD and related proteins, metallophosphatase domain	NA|407aa|up_8|NZ_CP027804.1_4213966_4215187_-	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|274aa|up_7|NZ_CP027804.1_4215356_4216178_+	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3	NA|167aa|up_6|NZ_CP027804.1_4216240_4216741_-	PRK00522, tpx, thiol peroxidase	NA|832aa|up_5|NZ_CP027804.1_4216877_4219373_+	PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional	NA|1346aa|up_4|NZ_CP027804.1_4219564_4223602_-	TIGR02103, pullulanase-like_protein_starch, alpha-1,6-glucosidases, pullulanase-type	NA|137aa|up_3|NZ_CP027804.1_4223883_4224294_+	cd14556, R-PTPc-typeIIb-2, PTP domain of type IIb (or R2B) subfamily receptor-type tyrosine-protein phosphatases, repeat 2	NA|320aa|up_2|NZ_CP027804.1_4224357_4225317_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|92aa|up_1|NZ_CP027804.1_4225388_4225664_+	cd10153, RcnR-FrmR-like_DUF156, Transcriptional regulators RcnR and FrmR, and related domains; this domain family was previously known as part of DUF156	NA|399aa|up_0|NZ_CP027804.1_4225833_4227030_+	PRK09257, PRK09257, aromatic amino acid transaminase	NA|108aa|down_0|NZ_CP027804.1_4228208_4228532_-	pfam08850, DUF1820, Domain of unknown function (DUF1820)	NA|284aa|down_1|NZ_CP027804.1_4228724_4229576_-	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family	NA|509aa|down_2|NZ_CP027804.1_4229613_4231140_-	PRK10977, PRK10977, hypothetical protein; Provisional	NA|114aa|down_3|NZ_CP027804.1_4231256_4231598_-	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)	NA|240aa|down_4|NZ_CP027804.1_4231600_4232320_-	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|164aa|down_5|NZ_CP027804.1_4232468_4232960_-	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1057aa|down_6|NZ_CP027804.1_4233205_4236376_+	cd07562, Peptidase_S41_TRI, Tricorn protease; serine protease family S41	NA|448aa|down_7|NZ_CP027804.1_4236471_4237815_-	pfam13688, Reprolysin_5, Metallo-peptidase family M12	NA|221aa|down_8|NZ_CP027804.1_4237835_4238498_-	NA	NA|732aa|down_9|NZ_CP027804.1_4238830_4241026_+	pfam11308, Glyco_hydro_129, Glycosyl hydrolases related to GH101 family, GH129
