assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003004135.1_ASM300413v1	NZ_CP021266	Legionella pneumophila subsp. pneumophila strain Knoxville 1 (D-7468) chromosome, complete genome	1	2320347-2320437	1	CRISPRCasFinder	no	cas3	cas3,csa3,DEDDh,DinG,PD-DExK,WYL,RT	Unclear	GGCTCTTCCCCAAATCCGGGGGCA	24	0	0	NA	NA	NA	1	1	Unclear	cas3,csa3,DEDDh,DinG,PD-DExK,WYL,RT	NA|70aa|up_8|NZ_CP021266.1_2312942_2313152_-,NA|268aa|up_6|NZ_CP021266.1_2314925_2315729_+,NA|87aa|up_4|NZ_CP021266.1_2316956_2317217_+,NA|206aa|up_2|NZ_CP021266.1_2317887_2318505_-,NA|164aa|up_1|NZ_CP021266.1_2318537_2319029_-,NA|193aa|down_1|NZ_CP021266.1_2321773_2322352_+,NA|189aa|down_2|NZ_CP021266.1_2322456_2323023_+	NA|162aa|up_9|NZ_CP021266.1_2312372_2312858_+	pfam08900, DUF1845, Domain of unknown function (DUF1845)	NA|70aa|up_8|NZ_CP021266.1_2312942_2313152_-	NA	NA|323aa|up_7|NZ_CP021266.1_2313298_2314267_-	pfam12358, DUF3644, Protein of unknown function (DUF3644)	NA|268aa|up_6|NZ_CP021266.1_2314925_2315729_+	NA	NA|300aa|up_5|NZ_CP021266.1_2315721_2316621_+	pfam12835, Integrase_1, Integrase	NA|87aa|up_4|NZ_CP021266.1_2316956_2317217_+	NA	NA|169aa|up_3|NZ_CP021266.1_2317279_2317786_+	pfam07275, ArdA, Antirestriction protein (ArdA)	NA|206aa|up_2|NZ_CP021266.1_2317887_2318505_-	NA	NA|164aa|up_1|NZ_CP021266.1_2318537_2319029_-	NA	NA|273aa|up_0|NZ_CP021266.1_2319039_2319858_-	PRK10904, PRK10904, adenine-specific DNA-methyltransferase	NA|392aa|down_0|NZ_CP021266.1_2320443_2321619_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|193aa|down_1|NZ_CP021266.1_2321773_2322352_+	NA	NA|189aa|down_2|NZ_CP021266.1_2322456_2323023_+	NA	NA|85aa|down_3|NZ_CP021266.1_2323370_2323625_+	TIGR02606, Antitoxin_ParD, putative addiction module antidote protein, CC2985 family	NA|99aa|down_4|NZ_CP021266.1_2323614_2323911_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|70aa|down_5|NZ_CP021266.1_2325648_2325858_+	COG1278, CspC, Cold shock proteins [Transcription]	cas3|469aa|down_6|NZ_CP021266.1_2326097_2327504_+	PRK11776, PRK11776, ATP-dependent RNA helicase DbpA; Provisional	NA|304aa|down_7|NZ_CP021266.1_2327660_2328572_+	COG3965, COG3965, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|173aa|down_8|NZ_CP021266.1_2328663_2329182_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|154aa|down_9|NZ_CP021266.1_2329522_2329984_-	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor
GCF_003004135.1_ASM300413v1	NZ_CP021266	Legionella pneumophila subsp. pneumophila strain Knoxville 1 (D-7468) chromosome, complete genome	2	2688325-2688491	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,PD-DExK,WYL,RT	Orphan	AAATTTACCGCGATAACAGTAATTT	25	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,DEDDh,DinG,PD-DExK,WYL,RT	NA|449aa|up_5|NZ_CP021266.1_2682328_2683675_+,NA|66aa|up_3|NZ_CP021266.1_2684422_2684620_-,NA|158aa|up_1|NZ_CP021266.1_2686500_2686974_+,NA|300aa|down_7|NZ_CP021266.1_2696318_2697218_-,NA|480aa|down_8|NZ_CP021266.1_2697379_2698819_+	NA|403aa|up_9|NZ_CP021266.1_2678621_2679830_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|87aa|up_8|NZ_CP021266.1_2679862_2680123_-	cd03478, Rieske_AIFL_N, AIFL (apoptosis-inducing factor like) family, N-terminal Rieske domain; members of this family show similarity to human AIFL, containing an N-terminal Rieske domain and a C-terminal pyridine nucleotide-disulfide oxidoreductase domain (Pyr_redox)	NA|465aa|up_7|NZ_CP021266.1_2680125_2681520_-	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme	NA|212aa|up_6|NZ_CP021266.1_2681524_2682160_-	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|449aa|up_5|NZ_CP021266.1_2682328_2683675_+	NA	NA|236aa|up_4|NZ_CP021266.1_2683664_2684372_-	cd19916, OphMA_like, tetrapyrrole methylase family protein similar to Omphalotus olearius omphalotin methyltransferase (OphMA) and Dendrothele bispora dbOphMA	NA|66aa|up_3|NZ_CP021266.1_2684422_2684620_-	NA	NA|409aa|up_2|NZ_CP021266.1_2684639_2685866_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|158aa|up_1|NZ_CP021266.1_2686500_2686974_+	NA	NA|306aa|up_0|NZ_CP021266.1_2687152_2688070_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|76aa|down_0|NZ_CP021266.1_2688512_2688740_+	TIGR03070, couple_hipB, transcriptional regulator, y4mF family	NA|103aa|down_1|NZ_CP021266.1_2688736_2689045_+	TIGR03071, couple_hipA, HipA N-terminal domain	NA|311aa|down_2|NZ_CP021266.1_2689041_2689974_+	pfam07804, HipA_C, HipA-like C-terminal domain	NA|856aa|down_3|NZ_CP021266.1_2690102_2692670_+	cd02077, P-type_ATPase_Mg, magnesium transporting ATPase (MgtA), similar to Escherichia coli MgtA and Salmonella typhimurium MgtA	NA|315aa|down_4|NZ_CP021266.1_2692704_2693649_+	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|594aa|down_5|NZ_CP021266.1_2693913_2695695_+	cd07544, P-type_ATPase_HM, P-type heavy metal-transporting ATPase; uncharacterized subfamily	NA|98aa|down_6|NZ_CP021266.1_2695997_2696291_-	cd15841, SNARE_Qc, SNARE motif, subgroup Qc	NA|300aa|down_7|NZ_CP021266.1_2696318_2697218_-	NA	NA|480aa|down_8|NZ_CP021266.1_2697379_2698819_+	NA	NA|303aa|down_9|NZ_CP021266.1_2699064_2699973_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain
