assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002997005.1_ASM299700v1	NZ_CP027538	Pseudomonas aeruginosa strain AR_0095 chromosome, complete genome	1	2698032-2698145	1	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,RT,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TCATACCTTGCCCTCCAGTTCTTTGGCC	28	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,RT,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|185aa|up_7|NZ_CP027538.1_2689122_2689677_+,NA|251aa|up_5|NZ_CP027538.1_2690445_2691198_+,NA|168aa|up_2|NZ_CP027538.1_2692951_2693455_+,NA	NA|231aa|up_9|NZ_CP027538.1_2687667_2688360_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|165aa|up_8|NZ_CP027538.1_2688362_2688857_-	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]	NA|185aa|up_7|NZ_CP027538.1_2689122_2689677_+	NA	NA|233aa|up_6|NZ_CP027538.1_2689698_2690397_-	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|251aa|up_5|NZ_CP027538.1_2690445_2691198_+	NA	NA|340aa|up_4|NZ_CP027538.1_2691217_2692237_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|204aa|up_3|NZ_CP027538.1_2692235_2692847_+	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|168aa|up_2|NZ_CP027538.1_2692951_2693455_+	NA	NA|351aa|up_1|NZ_CP027538.1_2693433_2694486_-	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|796aa|up_0|NZ_CP027538.1_2694596_2696984_+	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|385aa|down_0|NZ_CP027538.1_2699025_2700180_-	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|366aa|down_1|NZ_CP027538.1_2700234_2701332_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|368aa|down_2|NZ_CP027538.1_2701750_2702854_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|457aa|down_3|NZ_CP027538.1_2702969_2704340_-	PRK07480, PRK07480, putative aminotransferase; Validated	NA|453aa|down_4|NZ_CP027538.1_2704405_2705764_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|down_5|NZ_CP027538.1_2705804_2706557_-	pfam07722, Peptidase_C26, Peptidase C26	NA|459aa|down_6|NZ_CP027538.1_2706835_2708212_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|354aa|down_7|NZ_CP027538.1_2708467_2709529_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|222aa|down_8|NZ_CP027538.1_2709589_2710255_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|293aa|down_9|NZ_CP027538.1_2710417_2711296_+	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase
GCF_002997005.1_ASM299700v1	NZ_CP027538	Pseudomonas aeruginosa strain AR_0095 chromosome, complete genome	2	3882092-3882184	2	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,RT,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GGTCTGTTCGCTGCCGTTGTCGGC	24	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,RT,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|208aa|up_2|NZ_CP027538.1_3879871_3880495_+,NA|249aa|down_9|NZ_CP027538.1_3890957_3891704_-	NA|168aa|up_9|NZ_CP027538.1_3872417_3872921_-	PRK13261, ureE, urease accessory protein UreE; Provisional	NA|210aa|up_8|NZ_CP027538.1_3873150_3873780_-	PRK11202, PRK11202, HTH-type transcriptional repressor FabR	NA|367aa|up_7|NZ_CP027538.1_3873938_3875039_+	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain	NA|371aa|up_6|NZ_CP027538.1_3875035_3876148_+	COG3239, DesA, Fatty acid desaturase [Lipid metabolism]	NA|439aa|up_5|NZ_CP027538.1_3876367_3877684_+	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|464aa|up_4|NZ_CP027538.1_3877674_3879066_-	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|230aa|up_3|NZ_CP027538.1_3879044_3879734_-	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator	NA|208aa|up_2|NZ_CP027538.1_3879871_3880495_+	NA	NA|205aa|up_1|NZ_CP027538.1_3880548_3881163_+	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion]	NA|256aa|up_0|NZ_CP027538.1_3881159_3881927_+	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains	NA|178aa|down_0|NZ_CP027538.1_3882586_3883120_-	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]	NA|690aa|down_1|NZ_CP027538.1_3883415_3885485_+	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane]	NA|271aa|down_2|NZ_CP027538.1_3885486_3886299_-	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|136aa|down_3|NZ_CP027538.1_3886445_3886853_+	pfam07498, Rho_N, Rho termination factor, N-terminal domain	NA|115aa|down_4|NZ_CP027538.1_3886896_3887241_-	PRK11251, PRK11251, osmotically-inducible lipoprotein OsmE	NA|180aa|down_5|NZ_CP027538.1_3887329_3887869_-	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|139aa|down_6|NZ_CP027538.1_3888023_3888440_+	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF	NA|422aa|down_7|NZ_CP027538.1_3888614_3889880_-	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins	NA|288aa|down_8|NZ_CP027538.1_3890087_3890951_+	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]	NA|249aa|down_9|NZ_CP027538.1_3890957_3891704_-	NA
GCF_002997005.1_ASM299700v1	NZ_CP027538	Pseudomonas aeruginosa strain AR_0095 chromosome, complete genome	3	4313103-4313220	3	CRISPRCasFinder	no		WYL,cas3,DEDDh,csa3,RT,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	CCGCAGAGCGGTTATCCGCCATTTCGGCG	29	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DEDDh,csa3,RT,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|189aa|up_9|NZ_CP027538.1_4298484_4299051_+	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|279aa|up_8|NZ_CP027538.1_4299047_4299884_+	COG3725, AmpE, Membrane protein required for beta-lactamase induction [Defense mechanisms]	NA|674aa|up_7|NZ_CP027538.1_4300073_4302095_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|388aa|up_6|NZ_CP027538.1_4302546_4303710_+	cd00622, PLPDE_III_ODC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase	NA|142aa|up_5|NZ_CP027538.1_4303825_4304251_+	cd07251, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|601aa|up_4|NZ_CP027538.1_4304306_4306109_-	NF012179, CptA, phosphoethanolamine transferase CptA	NA|272aa|up_3|NZ_CP027538.1_4306231_4307047_-	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|227aa|up_2|NZ_CP027538.1_4307049_4307730_-	PRK05467, PRK05467, Fe(II)-dependent oxygenase superfamily protein; Provisional	NA|767aa|up_1|NZ_CP027538.1_4307947_4310248_+	COG4774, Fiu, Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]	NA|851aa|up_0|NZ_CP027538.1_4310463_4313016_+	COG0369, CysJ, Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism]	NA|300aa|down_0|NZ_CP027538.1_4313290_4314190_-	NF033391, lipid_A_LpxO, lipid A hydroxylase LpxO	NA|252aa|down_1|NZ_CP027538.1_4314319_4315075_+	COG1540, COG1540, Uncharacterized proteins, homologs of lactam utilization protein B [General function prediction only]	NA|226aa|down_2|NZ_CP027538.1_4315071_4315749_+	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]	NA|310aa|down_3|NZ_CP027538.1_4315745_4316675_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|158aa|down_4|NZ_CP027538.1_4316679_4317153_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|211aa|down_5|NZ_CP027538.1_4317294_4317927_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|324aa|down_6|NZ_CP027538.1_4317959_4318931_-	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional	NA|325aa|down_7|NZ_CP027538.1_4318930_4319905_-	PRK11022, dppD, dipeptide transporter ATP-binding subunit; Provisional	NA|304aa|down_8|NZ_CP027538.1_4319957_4320869_-	PRK10913, PRK10913, dipeptide ABC transporter permease DppC	NA|337aa|down_9|NZ_CP027538.1_4320880_4321891_-	PRK10914, PRK10914, dipeptide ABC transporter permease DppB
GCF_002997005.1_ASM299700v1	NZ_CP027538	Pseudomonas aeruginosa strain AR_0095 chromosome, complete genome	4	5224055-5224939	1,4,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	WYL,cas3,DEDDh,csa3,RT,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGTTCCCCACGGGTGTGGGGATGAACCG,GTGTTCCCCACGGGTGTGGGGATGAACCG,GTGTTCCCNCACGGGTGTGGGGATGAACCG	29,29,30	1	1	5224573-5224604	NZ_CP027538.1_3644300-3644331	I-E,II-B:I-E,II-B:NA	12,13,14	14	TypeI-E	WYL,cas3,DEDDh,csa3,RT,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|415aa|down_9|NZ_CP027538.1_5237791_5239036_+	NA|168aa|up_9|NZ_CP027538.1_5210919_5211423_-	pfam14595, Thioredoxin_9, Thioredoxin	NA|261aa|up_8|NZ_CP027538.1_5211614_5212397_+	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|504aa|up_7|NZ_CP027538.1_5212399_5213911_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|384aa|up_6|NZ_CP027538.1_5213900_5215052_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|483aa|up_5|NZ_CP027538.1_5215048_5216497_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|295aa|up_4|NZ_CP027538.1_5216879_5217764_-	COG4757, COG4757, Predicted alpha/beta hydrolase [General function prediction only]	NA|266aa|up_3|NZ_CP027538.1_5217820_5218618_-	PRK06563, PRK06563, crotonase/enoyl-CoA hydratase family protein	NA|187aa|up_2|NZ_CP027538.1_5218782_5219343_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|591aa|up_1|NZ_CP027538.1_5219422_5221195_+	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families	NA|859aa|up_0|NZ_CP027538.1_5221217_5223794_-	PRK13557, PRK13557, histidine kinase; Provisional	cas3|891aa|down_0|NZ_CP027538.1_5225660_5228333_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|523aa|down_1|NZ_CP027538.1_5228335_5229904_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|177aa|down_2|NZ_CP027538.1_5229900_5230431_+	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas7|381aa|down_3|NZ_CP027538.1_5230440_5231583_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|221aa|down_4|NZ_CP027538.1_5231584_5232247_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|204aa|down_5|NZ_CP027538.1_5232221_5232833_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|297aa|down_6|NZ_CP027538.1_5232859_5233750_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|100aa|down_7|NZ_CP027538.1_5233746_5234046_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|114aa|down_8|NZ_CP027538.1_5236434_5236776_-	pfam18226, QslA_E, LasR-specific antiactivator QslA chain E	NA|415aa|down_9|NZ_CP027538.1_5237791_5239036_+	NA
GCF_002997005.1_ASM299700v1	NZ_CP027538	Pseudomonas aeruginosa strain AR_0095 chromosome, complete genome	5	5234111-5236276	5,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	WYL,cas3,DEDDh,csa3,RT,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGTTCCCCACGTGCGTGGGGATGAACCG,GTGTTCCCCACGTGCGTGGGGATGAACCG,GTGTTCCCCACGTGCGTGGGGATGAACCG	29,29,29	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	35,35,19	35	TypeI-E	WYL,cas3,DEDDh,csa3,RT,DinG,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|415aa|down_1|NZ_CP027538.1_5237791_5239036_+	NA|591aa|up_9|NZ_CP027538.1_5219422_5221195_+	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families	NA|859aa|up_8|NZ_CP027538.1_5221217_5223794_-	PRK13557, PRK13557, histidine kinase; Provisional	cas3|891aa|up_7|NZ_CP027538.1_5225660_5228333_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|523aa|up_6|NZ_CP027538.1_5228335_5229904_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|177aa|up_5|NZ_CP027538.1_5229900_5230431_+	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas7|381aa|up_4|NZ_CP027538.1_5230440_5231583_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|221aa|up_3|NZ_CP027538.1_5231584_5232247_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|204aa|up_2|NZ_CP027538.1_5232221_5232833_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|297aa|up_1|NZ_CP027538.1_5232859_5233750_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|100aa|up_0|NZ_CP027538.1_5233746_5234046_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|114aa|down_0|NZ_CP027538.1_5236434_5236776_-	pfam18226, QslA_E, LasR-specific antiactivator QslA chain E	NA|415aa|down_1|NZ_CP027538.1_5237791_5239036_+	NA	NA|594aa|down_2|NZ_CP027538.1_5239122_5240904_+	TIGR01842, Proteases_secretion_ATP-binding_protein_PrtD, type I secretion system ABC transporter, PrtD family	NA|433aa|down_3|NZ_CP027538.1_5240900_5242199_+	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|482aa|down_4|NZ_CP027538.1_5242202_5243648_+	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|480aa|down_5|NZ_CP027538.1_5244006_5245446_+	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal	NA|132aa|down_6|NZ_CP027538.1_5245692_5246088_+	pfam02974, Inh, Protease inhibitor Inh	NA|542aa|down_7|NZ_CP027538.1_5246100_5247726_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|335aa|down_8|NZ_CP027538.1_5247965_5248970_+	COG2055, COG2055, Malate/L-lactate dehydrogenases [Energy production and conversion]	NA|527aa|down_9|NZ_CP027538.1_5249073_5250654_-	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase
