assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002983705.1_ASM298370v1	NZ_CP027404	Helicobacter pylori strain FDAARGOS_300 chromosome, complete genome	1	4973-5174	1	PILER-CR	no		DEDDh,cas3,cas14j	Orphan	TTCAATCAAGGCACTTATAATTTTAATAACA	31	0	0	NA	NA	I-B	3	3	Orphan	DEDDh,cas3,cas14j	NA,NA|220aa|down_8|NZ_CP027404.1_18365_19025_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|231aa|up_1|NZ_CP027404.1_2275_2968_-	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|333aa|up_0|NZ_CP027404.1_3113_4112_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|367aa|down_0|NZ_CP027404.1_11444_12545_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|69aa|down_1|NZ_CP027404.1_12614_12821_-	TIGR00013, Probable_tautomerase_K2, 4-oxalocrotonate tautomerase family enzyme	NA|194aa|down_2|NZ_CP027404.1_12989_13571_+	TIGR00615, Recombination_protein_RecR, recombination protein RecR	NA|382aa|down_3|NZ_CP027404.1_13567_14713_+	TIGR00094, tRNA_pseudouridine_synthase_D, tRNA pseudouridine synthase, TruD family	NA|317aa|down_4|NZ_CP027404.1_14681_15632_+	PRK02870, PRK02870, heat shock protein HtpX; Provisional	NA|181aa|down_5|NZ_CP027404.1_16099_16642_+	TIGR00063, GTP_cyclohydrolase_1, GTP cyclohydrolase I	NA|304aa|down_6|NZ_CP027404.1_16657_17569_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|268aa|down_7|NZ_CP027404.1_17565_18369_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|220aa|down_8|NZ_CP027404.1_18365_19025_+	NA	NA|201aa|down_9|NZ_CP027404.1_19026_19629_+	COG0720, COG0720, 6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism]
GCF_002983705.1_ASM298370v1	NZ_CP027404	Helicobacter pylori strain FDAARGOS_300 chromosome, complete genome	2	763303-763410	1	CRISPRCasFinder	no		DEDDh,cas3,cas14j	Orphan	AGAAAACCTAACTAAAGAAAAAAC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,cas14j	NA|70aa|up_0|NZ_CP027404.1_762229_762439_+,NA|190aa|down_1|NZ_CP027404.1_767329_767899_+,NA|118aa|down_5|NZ_CP027404.1_770078_770432_+	NA|333aa|up_9|NZ_CP027404.1_748621_749620_-	TIGR02124, Hydrogenase_expression/formation_protein_HypE, hydrogenase expression/formation protein HypE	NA|751aa|up_8|NZ_CP027404.1_749622_751875_-	TIGR00143, Carbamoyltransferase_HypF, [NiFe] hydrogenase maturation protein HypF	NA|331aa|up_7|NZ_CP027404.1_751871_752864_-	COG2957, COG2957, Peptidylarginine deiminase and related enzymes [Amino acid transport and metabolism]	NA|231aa|up_6|NZ_CP027404.1_752922_753615_-	pfam01555, N6_N4_Mtase, DNA methylase	NA|186aa|up_5|NZ_CP027404.1_753592_754150_-	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|344aa|up_4|NZ_CP027404.1_754583_755615_-	COG2189, COG2189, Adenine specific DNA methylase Mod [DNA replication, recombination, and repair]	NA|261aa|up_3|NZ_CP027404.1_755624_756407_-	pfam06300, Tsp45I, Tsp45I type II restriction enzyme	NA|497aa|up_2|NZ_CP027404.1_756834_758325_-	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter	NA|1186aa|up_1|NZ_CP027404.1_758351_761909_-	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA	NA|70aa|up_0|NZ_CP027404.1_762229_762439_+	NA	NA|328aa|down_0|NZ_CP027404.1_763921_764905_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|190aa|down_1|NZ_CP027404.1_767329_767899_+	NA	NA|87aa|down_2|NZ_CP027404.1_767914_768175_+	pfam06013, WXG100, Proteins of 100 residues with WXG	NA|501aa|down_3|NZ_CP027404.1_768185_769688_+	pfam14414, WHH, A nuclease of the HNH/ENDO VII superfamily with conserved WHH	NA|140aa|down_4|NZ_CP027404.1_769657_770077_+	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1)	NA|118aa|down_5|NZ_CP027404.1_770078_770432_+	NA	NA|807aa|down_6|NZ_CP027404.1_770424_772845_+	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|266aa|down_7|NZ_CP027404.1_772918_773716_-	COG0829, UreH, Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones]	NA|200aa|down_8|NZ_CP027404.1_773715_774315_-	TIGR00101, Urease_accessory_protein_UreG, urease accessory protein UreG	NA|257aa|down_9|NZ_CP027404.1_774343_775114_-	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]
GCF_002983705.1_ASM298370v1	NZ_CP027404	Helicobacter pylori strain FDAARGOS_300 chromosome, complete genome	3	785613-785719	2	CRISPRCasFinder	no		DEDDh,cas3,cas14j	Orphan	AACGACGACATGGGTAATAGCAACGA	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,cas14j	NA,NA	NA|257aa|up_9|NZ_CP027404.1_774343_775114_-	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]	NA|171aa|up_8|NZ_CP027404.1_775137_775650_-	PRK13261, ureE, urease accessory protein UreE; Provisional	NA|196aa|up_7|NZ_CP027404.1_775651_776239_-	cd13404, UreI_AmiS_like, UreI/AmiS family, proton-gated urea channel and putative amide transporters	NA|570aa|up_6|NZ_CP027404.1_776462_778172_-	PRK13985, ureB, urease subunit alpha	NA|239aa|up_5|NZ_CP027404.1_778175_778892_-	PRK13986, PRK13986, urease subunit beta	NA|158aa|up_4|NZ_CP027404.1_779262_779736_-	PRK00376, lspA, lipoprotein signal peptidase	NA|446aa|up_3|NZ_CP027404.1_779729_781067_-	PRK14324, glmM, phosphoglucosamine mutase; Provisional	NA|90aa|up_2|NZ_CP027404.1_781156_781426_+	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|353aa|up_1|NZ_CP027404.1_781544_782603_+	PRK00591, prfA, peptide chain release factor 1; Validated	NA|256aa|up_0|NZ_CP027404.1_783016_783784_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|674aa|down_0|NZ_CP027404.1_786230_788252_-	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|130aa|down_1|NZ_CP027404.1_788401_788791_-	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|142aa|down_2|NZ_CP027404.1_788787_789213_-	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|63aa|down_3|NZ_CP027404.1_789564_789753_-	pfam17402, DUF5408, Family of unknown function (DUF5408)	NA|451aa|down_4|NZ_CP027404.1_789759_791112_-	PTZ00383, PTZ00383, malate:quinone oxidoreductase; Provisional	NA|458aa|down_5|NZ_CP027404.1_791165_792539_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|691aa|down_6|NZ_CP027404.1_792558_794631_-	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated	NA|232aa|down_7|NZ_CP027404.1_794826_795522_-	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA|310aa|down_8|NZ_CP027404.1_795532_796462_-	TIGR00128, Malonyl_CoA-acyl_carrier_protein_transacylase, malonyl CoA-acyl carrier protein transacylase	NA|73aa|down_9|NZ_CP027404.1_796888_797107_+	pfam04556, DpnII, DpnII restriction endonuclease
