The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP027140	Escherichia coli strain AR_0369 chromosome, complete genome	4625479	134151	169219	4625479	terminase,lysis,integrase,transposase	Enterobacteria_phage(54.29%)	43	152317:152331	171506:171520
WP_000878218.1|134151_135018_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	2.3e-51
WP_000169527.1|135014_135314_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000373101.1|135600_136005_+	DUF1398 domain-containing protein	NA	NA	NA	NA	NA
WP_032082692.1|136057_136168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001295666.1|136704_137028_+	anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	65.4	3.0e-41
WP_000539894.1|137130_137283_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	96.0	1.4e-20
WP_000207931.1|137994_139116_-	5-methylcytosine-specific restriction endonuclease system specificity protein McrC	NA	NA	NA	NA	NA
WP_000379042.1|139112_141068_-	AAA domain-containing protein	NA	K4I1H4	Acidithiobacillus_phage	28.6	7.5e-26
WP_000756238.1|142135_143224_+	acyltransferase	NA	A0A2H4JA46	uncultured_Caudovirales_phage	28.0	1.1e-15
WP_164079435.1|143931_146613_-	DUF1983 domain-containing protein	NA	K7PKJ2	Enterobacteria_phage	98.0	0.0e+00
WP_105394109.1|146641_147217_-|terminase	terminase small subunit	terminase	A0A0K2FIG2	Enterobacteria_phage	99.4	1.2e-88
WP_001307652.1|147605_147800_+	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	96.8	9.7e-27
WP_000738423.1|148162_148456_+	increased serum survival lipoprotein Iss	NA	K7PL54	Enterobacteria_phage	91.8	2.0e-44
WP_077628513.1|148546_148729_-|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	96.7	2.5e-16
WP_001135274.1|148945_149443_-	lysozyme RrrD	NA	M1FJA0	Enterobacteria_phage	97.0	3.2e-90
WP_000839596.1|149442_149658_-|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	100.0	9.0e-34
WP_000737273.1|150231_151314_+	porin OmpD	NA	Q1MVN1	Enterobacteria_phage	76.8	3.3e-156
WP_001204780.1|151502_151886_-	antitermination protein QuuD	NA	A0A088CD47	Shigella_phage	84.2	4.0e-56
WP_000971070.1|151971_152112_-	YlcG family protein	NA	K7PHH3	Enterobacteria_phage	69.8	1.5e-08
WP_001099518.1|152108_152471_-	crossover junction endodeoxyribonuclease RusA	NA	K7PM48	Enterobacteria_phage	94.8	6.2e-59
152317:152331	attL	GCCAGACCGATATCC	NA	NA	NA	NA
WP_000774486.1|152467_152758_-	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	93.8	3.3e-47
WP_000224907.1|152750_152921_-	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	67.9	5.3e-13
WP_001010743.1|152920_153376_-	DNA base-flipping protein YbcN	NA	I6PD71	Cronobacter_phage	67.5	1.7e-61
WP_000986835.1|153546_153798_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021568450.1|153857_154472_-	hypothetical protein	NA	Q7Y5X0	Haemophilus_phage	41.7	6.4e-32
WP_024239936.1|155083_156979_-	NACHT domain-containing protein	NA	NA	NA	NA	NA
WP_021568452.1|157366_157546_-	hypothetical protein	NA	M1FPD5	Enterobacteria_phage	89.7	2.3e-22
WP_105394110.1|157542_158184_-	Replication protein P	NA	A0A0K2FIT1	Enterobacteria_phage	97.0	3.0e-109
WP_001295669.1|158433_159126_+	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	86.1	1.5e-109
WP_000741702.1|159255_160395_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_000233576.1|161382_161589_+	phage encoded cell division inhibitor protein	NA	K7P6H3	Enterobacteria_phage	85.3	3.2e-28
WP_105394111.1|161665_161962_+	host-nuclease inhibitor protein Gam	NA	A0A1I9LJN1	Stx_converting_phage	96.9	2.6e-47
WP_000100847.1|161967_162753_+	phage recombination protein Bet	NA	A0A1I9LJN0	Stx_converting_phage	100.0	6.3e-149
WP_000186763.1|162749_163430_+	YqaJ viral recombinase family protein	NA	A0A0N6WET1	Escherichia_phage	99.6	3.0e-131
WP_000682314.1|163426_163588_+	DUF1317 family protein	NA	A0A0P0ZAS9	Stx2-converting_phage	98.0	1.2e-22
WP_000129285.1|163580_164138_+	phage N-6-adenine-methyltransferase	NA	E5AGF8	Erwinia_phage	62.3	2.0e-61
WP_001386642.1|164148_164430_+	cell division protein ZapA	NA	A0A0P0ZE02	Stx2-converting_phage	98.9	5.5e-47
WP_000763387.1|164528_164747_+	TraR/DksA family transcriptional regulator	NA	M1FQT7	Enterobacteria_phage	98.6	1.7e-35
WP_000488406.1|164794_165034_+	DUF4222 domain-containing protein	NA	M1FPC8	Enterobacteria_phage	94.9	3.9e-38
WP_164079430.1|165111_166325_-|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	99.3	3.2e-168
WP_000088653.1|166486_166723_+	excisionase	NA	NA	NA	NA	NA
WP_000741338.1|166712_167855_+|integrase	tyrosine-type recombinase/integrase	integrase	O21929	Phage_21	100.0	6.2e-206
WP_000444487.1|167968_169219_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	100.0	3.8e-23
171506:171520	attR	GCCAGACCGATATCC	NA	NA	NA	NA
>prophage 2
NZ_CP027140	Escherichia coli strain AR_0369 chromosome, complete genome	4625479	557745	582842	4625479	tail,protease,lysis,integrase	Enterobacteria_phage(55.26%)	44	547988:548002	591328:591342
547988:548002	attL	CAGGCCATCTTCCAG	NA	NA	NA	NA
WP_077762688.1|557745_557871_-|tail	phage tail protein	tail	K7PMH7	Enterobacteria_phage	85.0	3.9e-13
WP_105394138.1|557925_561231_-|tail	phage tail protein	tail	K7PGT9	Enterobacteria_phage	69.5	1.1e-282
WP_000105084.1|562423_562657_+	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	94.4	7.3e-21
WP_000079508.1|562713_563124_+	DUF1398 family protein	NA	C6ZCX4	Enterobacteria_phage	76.3	1.3e-52
WP_001139678.1|563475_563628_-	hypothetical protein	NA	K7PKL2	Enterobacteria_phage	96.0	3.1e-20
WP_000092273.1|563615_564083_-|lysis	lysis protein	lysis	A0A2D1GLQ7	Escherichia_phage	96.8	1.6e-75
WP_001135261.1|564079_564577_-	lysozyme RrrD	NA	A0A1B5FP97	Escherichia_phage	97.6	4.2e-90
WP_000839582.1|564576_564792_-|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	98.6	1.2e-33
WP_016246969.1|564979_565711_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000592546.1|566062_567022_-	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA	NA
WP_000780581.1|567214_567739_+	lipocalin family protein	NA	A0A1W6JNX6	Morganella_phage	54.1	1.1e-48
WP_001204777.1|567894_568272_-	antitermination protein	NA	Q777W5	Enterobacteria_phage	84.2	7.3e-55
WP_000971055.1|568357_568498_-	YlcG family protein	NA	K7PHH3	Enterobacteria_phage	69.8	1.1e-08
WP_001099699.1|568494_568857_-	crossover junction endodeoxyribonuclease RusA	NA	K7PM48	Enterobacteria_phage	97.4	2.5e-60
WP_000774488.1|568853_569144_-	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	94.8	4.3e-47
WP_000224916.1|569136_569307_-	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	67.9	1.5e-12
WP_001053031.1|569306_569762_-	DNA base-flipping protein YbcN	NA	I6PD71	Cronobacter_phage	68.2	3.7e-61
WP_072097297.1|569758_569860_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021548985.1|569968_570169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001224618.1|570798_571293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000145896.1|571439_571613_-	hypothetical protein	NA	M1FPD5	Enterobacteria_phage	85.5	2.3e-19
WP_039022785.1|571609_572311_-	Replication protein P	NA	M1FJ72	Enterobacteria_phage	97.4	4.6e-127
WP_032200171.1|572307_573207_-	replication protein	NA	A0A0K2FJ31	Enterobacteria_phage	99.3	7.9e-172
WP_000251067.1|573239_573533_-	hypothetical protein	NA	A2SY75	Escherichia_phage	99.0	1.4e-45
WP_001194218.1|573652_573868_-	helix-turn-helix transcriptional regulator	NA	Q716D6	Shigella_phage	100.0	1.4e-31
WP_000028392.1|573973_574606_+	LexA family transcriptional regulator	NA	K7P850	Enterobacteria_phage	99.5	1.6e-118
WP_000618037.1|574602_575007_+	hypothetical protein	NA	Q716D7	Shigella_phage	98.5	4.3e-69
WP_000340004.1|575360_575684_+	antitermination protein	NA	A4KWR8	Enterobacteria_phage	94.3	1.4e-49
WP_001271096.1|575680_576562_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000065384.1|576750_577119_+	DUF2528 family protein	NA	M1FPD2	Enterobacteria_phage	98.4	2.2e-64
WP_001198861.1|577191_577356_+|protease	protease FtsH-inhibitory lysogeny factor CIII	protease	Q776Q5	Enterobacteria_phage	100.0	1.1e-26
WP_000372939.1|577324_577489_+	host cell division inhibitory peptide Kil	NA	A0A0P0ZC96	Stx2-converting_phage	96.2	3.0e-21
WP_000995439.1|577542_577839_+	host-nuclease inhibitor protein Gam	NA	A0A1I9LJN1	Stx_converting_phage	100.0	1.6e-49
WP_000100845.1|577844_578630_+	phage recombination protein Bet	NA	A0A0N7KZJ3	Stx2-converting_phage	100.0	1.1e-148
WP_001586755.1|578626_579307_+	YqaJ viral recombinase family protein	NA	A0A0P0ZCQ7	Stx2-converting_phage	98.7	3.9e-131
WP_000682311.1|579303_579486_+	DUF1317 domain-containing protein	NA	A0A0P0ZD61	Stx2-converting_phage	96.7	1.4e-27
WP_000548531.1|579458_579650_+	DUF1382 family protein	NA	A0A0P0ZC67	Stx2-converting_phage	100.0	7.3e-27
WP_077250124.1|579660_579942_+	cell division protein ZapA	NA	A0A0P0ZE02	Stx2-converting_phage	97.8	7.9e-46
WP_000763363.1|580040_580262_+	TraR/DksA family transcriptional regulator	NA	A0A0N7C211	Escherichia_phage	98.6	6.4e-35
WP_001289873.1|580258_580807_+	ead/Ea22-like family protein	NA	A0A0K2FJF6	Enterobacteria_phage	100.0	2.2e-100
WP_000026224.1|580998_581280_+	hypothetical protein	NA	A0A0K2FIU9	Enterobacteria_phage	100.0	2.8e-51
WP_000545728.1|581368_581536_+	hypothetical protein	NA	A0A0K2FJ46	Enterobacteria_phage	98.2	1.3e-27
WP_001303849.1|581575_581794_+	excisionase	NA	Q77WA4	Escherichia_phage	100.0	3.7e-35
WP_000533643.1|581771_582842_+|integrase	tyrosine-type recombinase/integrase	integrase	K7P6P6	Enterobacteria_phage	100.0	3.9e-202
591328:591342	attR	CAGGCCATCTTCCAG	NA	NA	NA	NA
>prophage 3
NZ_CP027140	Escherichia coli strain AR_0369 chromosome, complete genome	4625479	773113	840840	4625479	tRNA,protease,transposase	Macacine_betaherpesvirus(10.0%)	54	NA	NA
WP_001300563.1|773113_774226_-|transposase	IS4-like element IS421 family transposase	transposase	NA	NA	NA	NA
WP_000956455.1|774302_774455_-	type I toxin-antitoxin system toxin HokE	NA	NA	NA	NA	NA
WP_105394158.1|774551_775921_-|transposase	IS3-like element IS150 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	99.5	1.4e-111
WP_021567285.1|776188_777307_+	glutamate--cysteine ligase	NA	NA	NA	NA	NA
WP_000682514.1|777372_777621_+	DUF1158 domain-containing protein	NA	NA	NA	NA	NA
WP_105394159.1|777685_778054_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_000351464.1|778147_778801_+	oxygen-insensitive NAD(P)H nitroreductase	NA	NA	NA	NA	NA
WP_001153148.1|778908_780156_+	mechanosensitive ion channel YbdG	NA	NA	NA	NA	NA
WP_000786320.1|780223_781600_-	phenylalanine transporter	NA	NA	NA	NA	NA
WP_105394160.1|781701_784845_-	Cu(+)/Ag(+) efflux RND transporter permease subunit CusA	NA	S5VTK5	Leptospira_phage	22.2	1.3e-59
WP_063120038.1|784856_786080_-	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB	NA	NA	NA	NA	NA
WP_000709870.1|786095_786428_-	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF	NA	NA	NA	NA	NA
WP_096252209.1|786585_787959_-	Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC	NA	NA	NA	NA	NA
WP_000770953.1|788115_788799_+	copper response regulator transcription factor CusR	NA	W8CYM9	Bacillus_phage	35.1	1.0e-30
WP_000253805.1|788788_790237_+	Cu(+)/Ag(+) sensor histidine kinase CusS	NA	A0A1V0SGX0	Hokovirus	26.1	3.9e-11
WP_000889443.1|795604_795865_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001300892.1|795990_796152_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000420966.1|797116_798253_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_000878218.1|798850_799717_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	2.3e-51
WP_000169527.1|799713_800013_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_001177460.1|800227_800989_+	DNA-binding transcriptional regulator EnvY	NA	NA	NA	NA	NA
WP_000805422.1|801353_801986_+	fimbria biosynthesis transcriptional regulator FimZ	NA	NA	NA	NA	NA
WP_001255228.1|801988_802504_-	fimbria assembly protein	NA	NA	NA	NA	NA
WP_105394161.1|802514_803522_-	type 1 fimbrin D-mannose specific adhesin FimH	NA	NA	NA	NA	NA
WP_000776555.1|807861_808404_-	type 1 fimbrial protein subunit FimA	NA	NA	NA	NA	NA
WP_000729155.1|808884_809751_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	37.5	1.7e-30
WP_000190293.1|809752_809965_+	ribosome-associated protein YbcJ	NA	NA	NA	NA	NA
WP_105394162.1|810072_810594_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_000912345.1|810629_812015_-|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	34.8	3.9e-45
WP_000255997.1|812188_812683_+	peptidylprolyl isomerase B	NA	NA	NA	NA	NA
WP_000212252.1|812685_813408_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_001351650.1|813525_814035_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA	NA
WP_000815536.1|814031_815099_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_105394163.1|815235_816129_-	carbamate kinase	NA	NA	NA	NA	NA
WP_105394164.1|816125_816941_-	DUF2877 domain-containing protein	NA	NA	NA	NA	NA
WP_000495380.1|816951_818211_-	DUF1116 domain-containing protein	NA	NA	NA	NA	NA
WP_000580817.1|818220_819888_-	acyl-CoA synthetase FdrA	NA	NA	NA	NA	NA
WP_000703912.1|820204_821254_+	ureidoglycolate dehydrogenase	NA	NA	NA	NA	NA
WP_001490892.1|821275_822511_+	allantoate deiminase	NA	NA	NA	NA	NA
WP_000540963.1|822521_823307_+	(S)-ureidoglycine aminohydrolase	NA	NA	NA	NA	NA
WP_105394165.1|823534_824680_-	glycerate 3-kinase	NA	W6LM47	Streptococcus_phage	41.9	3.1e-48
WP_001302767.1|824701_826003_-	uracil/xanthine transporter	NA	NA	NA	NA	NA
WP_000006890.1|826059_827421_-	allantoinase AllB	NA	NA	NA	NA	NA
WP_000401100.1|827480_828935_-	putative allantoin permease	NA	NA	NA	NA	NA
WP_000765839.1|829103_829982_-	2-hydroxy-3-oxopropionate reductase	NA	NA	NA	NA	NA
WP_000943544.1|830081_830858_-	hydroxypyruvate isomerase	NA	NA	NA	NA	NA
WP_001096881.1|830870_832652_-	glyoxylate carboligase	NA	E4WLQ6	Ostreococcus_tauri_virus	27.0	3.5e-38
WP_000141275.1|832741_833557_-	HTH-type transcriptional repressor AllR	NA	NA	NA	NA	NA
WP_000776388.1|833634_834117_-	ureidoglycolate lyase	NA	NA	NA	NA	NA
WP_000460145.1|834347_835274_+	HTH-type transcriptional activator AllS	NA	NA	NA	NA	NA
WP_105394166.1|835342_836437_+|tRNA	tRNA 2-selenouridine(34) synthase MnmH	tRNA	NA	NA	NA	NA
WP_000561866.1|837148_839563_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_001110573.1|839559_840246_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.6	2.9e-33
WP_001295836.1|840216_840840_+|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	protease	NA	NA	NA	NA
>prophage 4
NZ_CP027140	Escherichia coli strain AR_0369 chromosome, complete genome	4625479	1026702	1087704	4625479	tail,holin,protease,transposase	Micromonas_sp._RCC1109_virus(15.38%)	48	NA	NA
WP_000131044.1|1026702_1028736_-|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	27.4	3.4e-21
WP_001335745.1|1028864_1029452_+	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_016241916.1|1029465_1030938_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_001159094.1|1030951_1032622_+|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	31.2	4.7e-61
WP_001209100.1|1032834_1033503_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000370307.1|1033745_1034441_-	lactate utilization protein C	NA	NA	NA	NA	NA
WP_000023927.1|1034433_1035861_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA	NA
WP_001102119.1|1035871_1036591_-	(Fe-S)-binding protein	NA	NA	NA	NA	NA
WP_000339587.1|1037117_1037972_-	DNA-binding transcriptional regulator RclR	NA	NA	NA	NA	NA
WP_001046293.1|1038197_1039523_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	47.8	8.5e-114
WP_000474077.1|1039631_1039868_+	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
WP_001306921.1|1039879_1040473_+	reactive chlorine species resistance protein RclC	NA	NA	NA	NA	NA
WP_000621009.1|1041062_1041914_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000070699.1|1046448_1047138_+	aldehyde dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_000643327.1|1047134_1048091_+	aldehyde oxidoreductase FAD-binding subunit PaoB	NA	NA	NA	NA	NA
WP_000667031.1|1048087_1050286_+	aldehyde oxidoreductase molybdenum-binding subunit PaoC	NA	A0A0P0I429	Acinetobacter_phage	25.8	1.1e-38
WP_000122395.1|1050295_1051252_+	molybdenum cofactor insertion chaperone PaoD	NA	NA	NA	NA	NA
WP_001111348.1|1051230_1051641_+	hypothetical protein	NA	NA	NA	NA	NA
WP_105394182.1|1052206_1053673_-	hypothetical protein	NA	NA	NA	NA	NA
WP_097454934.1|1053988_1054408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000355478.1|1054912_1055686_+	hypothetical protein	NA	G9IA57	Pseudomonas_phage	38.9	1.1e-36
WP_000185984.1|1056237_1057305_+	acyltransferase	NA	NA	NA	NA	NA
WP_021552272.1|1057565_1057982_-|tail	tail assembly chaperone	tail	U5P0S4	Shigella_phage	71.6	1.0e-20
WP_000081352.1|1059899_1060832_-	homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_001373486.1|1060818_1062222_-	S-methylmethionine permease	NA	NA	NA	NA	NA
WP_032200816.1|1062496_1063708_-	3-(3-hydroxy-phenyl)propionate transporter MhpT	NA	NA	NA	NA	NA
WP_050489559.1|1063825_1064791_-	4-hydroxy-2-oxovalerate aldolase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	30.4	1.2e-40
WP_000044265.1|1064787_1065738_-	acetaldehyde dehydrogenase (acetylating)	NA	E5EQ71	Micromonas_sp._RCC1109_virus	36.0	5.3e-33
WP_000184938.1|1065734_1066544_-	2-keto-4-pentenoate hydratase	NA	NA	NA	NA	NA
WP_032177544.1|1066553_1067420_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_063117574.1|1067448_1068402_-	3-carboxyethylcatechol 2,3-dioxygenase	NA	NA	NA	NA	NA
WP_032177827.1|1070591_1071890_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	48.6	2.3e-47
WP_001247777.1|1072216_1072480_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_001295708.1|1072494_1072758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000643630.1|1073000_1073282_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_032177826.1|1073316_1073886_+	small heat shock protein sHSP20	NA	NA	NA	NA	NA
WP_000101613.1|1073991_1076841_+	heat shock survival AAA family ATPase ClpK	NA	K4FB40	Cronobacter_phage	41.2	1.2e-128
WP_001295707.1|1076840_1077032_+	hypothetical protein	NA	NA	NA	NA	NA
WP_105394183.1|1077092_1078820_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	C7U047	Ostreococcus_tauri_virus	37.9	1.2e-86
WP_001275373.1|1078907_1079366_+	small heat shock protein sHSP20-GI	NA	NA	NA	NA	NA
WP_001022486.1|1079388_1080303_+	heat resistance protein YfdX1	NA	NA	NA	NA	NA
WP_032177823.1|1080405_1081293_+	heat resistance protein YfdX2	NA	NA	NA	NA	NA
WP_001090779.1|1081382_1081994_+	heat resistance membrane protein HdeD-GI	NA	NA	NA	NA	NA
WP_032200811.1|1082073_1083219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000786816.1|1083208_1083649_+	heat resistance system thioredoxin Trx-GI	NA	A0A1J0GW78	Streptomyces_phage	37.2	4.5e-11
WP_032177822.1|1083652_1085368_+	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	NA	NA	NA
WP_000843382.1|1085364_1085862_+	heat resistance protein PsiE-GI	NA	NA	NA	NA	NA
WP_000323729.1|1086552_1087704_+|protease	trypsin-like serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	30.3	7.5e-26
>prophage 5
NZ_CP027140	Escherichia coli strain AR_0369 chromosome, complete genome	4625479	3095652	3106112	4625479		Escherichia_phage(71.43%)	9	NA	NA
WP_000081550.1|3095652_3096645_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
WP_000104459.1|3096738_3098103_-	GntP family transporter	NA	NA	NA	NA	NA
WP_001136925.1|3098191_3098968_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_001278994.1|3098972_3099611_-	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.4e-82
WP_000590403.1|3099607_3100870_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	61.4	1.7e-135
WP_000847971.1|3100866_3101775_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.5	5.1e-118
WP_001295181.1|3101970_3102738_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.7	2.5e-70
WP_001141320.1|3102788_3103445_-	protein-serine/threonine phosphatase	NA	A0A077SLQ6	Escherichia_phage	47.0	6.6e-51
WP_001272928.1|3103550_3106112_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.6	3.0e-30
>prophage 6
NZ_CP027140	Escherichia coli strain AR_0369 chromosome, complete genome	4625479	3193553	3276167	4625479	protease,head,portal,integrase,transposase,tail,capsid,plate,tRNA	Shigella_phage(46.94%)	86	3187096:3187110	3207156:3207170
3187096:3187110	attL	GTTTTGGCATCCAGT	NA	NA	NA	NA
WP_001244665.1|3193553_3193841_-	hypothetical protein	NA	Q7M2A0	Enterobacteria_phage	97.9	8.6e-48
WP_086676117.1|3193833_3194388_-	ash family protein	NA	Q7M2A7	Enterobacteria_phage	73.8	2.3e-41
WP_001149160.1|3194384_3194651_-	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	100.0	4.9e-45
WP_086676115.1|3195202_3195937_+	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	98.4	1.1e-128
WP_000638629.1|3195933_3196434_+	transactivation protein	NA	NA	NA	NA	NA
WP_000446132.1|3196507_3197080_+	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	97.3	2.2e-95
WP_086676113.1|3197424_3199656_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059040148.1|3199681_3200884_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1B5FPC6	Escherichia_phage	49.9	3.5e-106
WP_016243807.1|3201225_3201849_+	DUF4433 domain-containing protein	NA	NA	NA	NA	NA
WP_032219797.1|3201852_3202542_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016243805.1|3202574_3203744_-	DUF3596 domain-containing protein	NA	I6PDJ1	Cronobacter_phage	67.3	2.3e-147
WP_001331174.1|3203704_3203911_-	hypothetical protein	NA	I6PBM8	Cronobacter_phage	70.3	6.9e-23
WP_001331173.1|3203970_3204186_-	hypothetical protein	NA	K7PLX1	Enterobacteria_phage	65.1	1.2e-14
WP_105394331.1|3204182_3204545_-	hypothetical protein	NA	U5P092	Shigella_phage	98.3	2.2e-64
WP_000008210.1|3204535_3205072_-	5'-deoxynucleotidase	NA	U5P0T3	Shigella_phage	99.4	9.7e-101
WP_105394332.1|3205199_3206024_-	DUF2303 family protein	NA	U5P439	Shigella_phage	99.6	1.3e-149
WP_000135682.1|3206089_3206452_-	hypothetical protein	NA	U5P4J6	Shigella_phage	100.0	3.3e-60
WP_105394333.1|3206920_3207355_+	hypothetical protein	NA	U5P096	Shigella_phage	99.3	2.4e-78
3207156:3207170	attR	ACTGGATGCCAAAAC	NA	NA	NA	NA
WP_157915287.1|3208158_3208299_+	hypothetical protein	NA	U5P0Q5	Shigella_phage	97.8	2.2e-17
WP_000605606.1|3208310_3208493_+	hypothetical protein	NA	S5FXQ9	Shigella_phage	100.0	1.7e-25
WP_032252663.1|3208492_3209734_+|portal	phage portal protein	portal	U5P411	Shigella_phage	99.3	1.3e-241
WP_001193634.1|3209711_3210362_+|head,protease	HK97 family phage prohead protease	head,protease	U5P4H2	Shigella_phage	99.1	3.6e-118
WP_105394334.1|3210376_3211582_+|capsid	phage major capsid protein	capsid	U5P0G9	Shigella_phage	98.5	8.5e-222
WP_000601360.1|3211631_3211832_+	hypothetical protein	NA	S5FNU1	Shigella_phage	97.0	3.8e-26
WP_000927711.1|3211834_3212158_+|head,tail	phage gp6-like head-tail connector protein	head,tail	U5P072	Shigella_phage	99.1	1.1e-56
WP_000702388.1|3212154_3212565_+|head	phage head closure protein	head	M1FJ87	Enterobacteria_phage	97.8	5.9e-74
WP_000213502.1|3212539_3213046_+	hypothetical protein	NA	M1FPE2	Enterobacteria_phage	100.0	1.7e-91
WP_097514362.1|3213042_3213603_+	hypothetical protein	NA	S5FM61	Shigella_phage	98.9	3.0e-105
WP_000497751.1|3213611_3213782_+	DUF2635 domain-containing protein	NA	Q8SBH3	Shigella_phage	100.0	9.3e-26
WP_105394335.1|3213765_3215262_+|tail	phage tail protein	tail	M1FN90	Enterobacteria_phage	99.0	1.0e-272
WP_000090998.1|3215261_3215618_+	hypothetical protein	NA	U5P076	Shigella_phage	100.0	5.3e-63
WP_000661054.1|3215617_3215887_+|tail	phage tail assembly protein	tail	M1FPE4	Enterobacteria_phage	100.0	3.5e-43
WP_105394336.1|3216028_3217870_+|tail	phage tail tape measure protein	tail	S5FM63	Shigella_phage	98.7	3.6e-304
WP_001300563.1|3218045_3219158_-|transposase	IS4-like element IS421 family transposase	transposase	NA	NA	NA	NA
WP_000866660.1|3219300_3219978_+	hypothetical protein	NA	A0A0R6PJY5	Moraxella_phage	46.1	5.0e-46
WP_123907335.1|3220031_3221360_+	DNA circularization protein	NA	Q8SBG8	Shigella_phage	97.7	2.3e-244
WP_000998621.1|3221356_3222436_+	hypothetical protein	NA	U5P0H6	Shigella_phage	99.4	5.9e-206
WP_105394338.1|3222435_3222984_+|plate	phage baseplate assembly protein	plate	Q8SBG6	Shigella_phage	99.5	1.9e-96
WP_123907345.1|3222983_3223409_+|tail	phage tail protein	tail	U5P0R9	Shigella_phage	97.9	5.7e-80
WP_000785290.1|3223395_3224454_+|plate	baseplate J/gp47 family protein	plate	M1FQW3	Enterobacteria_phage	97.7	8.9e-199
WP_000383547.1|3224444_3225029_+	YmfQ family protein	NA	O22003	Shigella_phage	99.5	1.4e-113
WP_000554676.1|3225032_3225959_+	hypothetical protein	NA	U5P0I1	Shigella_phage	85.0	7.1e-51
WP_000994385.1|3225958_3226375_+|tail	phage tail assembly protein	tail	U5P0S4	Shigella_phage	71.6	2.2e-20
WP_000185984.1|3226635_3227703_-	acyltransferase	NA	NA	NA	NA	NA
WP_042513629.1|3228254_3229028_-	hypothetical protein	NA	G9IA57	Pseudomonas_phage	38.9	1.1e-36
WP_072095179.1|3229461_3230865_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	50.1	4.0e-106
WP_072161528.1|3230899_3232114_-	restriction endonuclease	NA	E5E3X4	Burkholderia_phage	38.6	7.9e-34
WP_000162574.1|3232919_3233402_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	46.8	4.0e-29
WP_000600189.1|3233533_3234010_+	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA	NA
WP_001117838.1|3233999_3234290_+	RnfH family protein	NA	NA	NA	NA	NA
WP_001203437.1|3234351_3234693_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_105394340.1|3234841_3236503_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001059169.1|3236588_3237467_-	NAD(+) kinase	NA	NA	NA	NA	NA
WP_001296310.1|3237589_3238183_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_010723175.1|3238237_3239524_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_001189257.1|3239544_3240411_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_000460035.1|3240502_3241864_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_000256450.1|3242000_3242249_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_000043335.1|3242267_3242816_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000264777.1|3242846_3243614_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_000065253.1|3243655_3244003_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000589828.1|3244078_3244561_-	OmpA family protein	NA	NA	NA	NA	NA
WP_105394341.1|3244576_3245803_-	diguanylate cyclase DgcN	NA	NA	NA	NA	NA
WP_001212391.1|3245792_3246311_-	YfiR family protein	NA	NA	NA	NA	NA
WP_000976004.1|3246460_3246826_-	DUF2799 domain-containing protein	NA	NA	NA	NA	NA
WP_001168045.1|3247035_3248106_+	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.2	4.0e-90
WP_000225221.1|3248116_3249238_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_000200120.1|3249280_3250441_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
WP_001386991.1|3250538_3250586_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000178456.1|3250689_3251031_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_000197686.1|3251301_3252039_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_000079100.1|3252173_3253154_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
WP_000040129.1|3253150_3253882_+	polyphenol oxidase	NA	NA	NA	NA	NA
WP_001235102.1|3254011_3256585_+	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.3	2.6e-127
WP_000841103.1|3262447_3263746_+	alpha-ketoglutarate permease	NA	Q6JIH2	Burkholderia_virus	32.2	1.3e-45
WP_000464870.1|3263742_3264087_-	YfiM family lipoprotein	NA	NA	NA	NA	NA
WP_000949265.1|3264111_3265467_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_000083005.1|3265580_3268241_-	protein lysine acetyltransferase	NA	NA	NA	NA	NA
WP_001300438.1|3268272_3268971_-	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_001098726.1|3269039_3269459_-	thioredoxin TrxC	NA	A0A0K2FIM3	Achromobacter_phage	38.5	2.8e-15
WP_000997403.1|3269665_3270703_+|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
WP_105394342.1|3270750_3271440_-	uracil-DNA glycosylase	NA	J9QYL4	Leporid_alphaherpesvirus	50.2	1.6e-55
WP_000627807.1|3271744_3272128_+	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	72.0	1.4e-32
WP_000189207.1|3272183_3272771_-	cysteine/O-acetylserine transporter	NA	NA	NA	NA	NA
WP_000219193.1|3273963_3275298_-	ATP-dependent RNA helicase SrmB	NA	E3T5E1	Cafeteria_roenbergensis_virus	30.8	2.9e-45
WP_001295363.1|3275429_3276167_+|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	tRNA	NA	NA	NA	NA
>prophage 7
NZ_CP027140	Escherichia coli strain AR_0369 chromosome, complete genome	4625479	3742334	3751779	4625479		Enterobacteria_phage(85.71%)	10	NA	NA
WP_000569357.1|3742334_3743261_+	glycine betaine ABC transporter ATP binding protein YehX	NA	G3M9Y6	Bacillus_virus	30.8	1.7e-23
WP_000783120.1|3743265_3743997_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA	NA
WP_001216963.1|3743977_3744085_-	protein YohO	NA	NA	NA	NA	NA
WP_001240401.1|3744144_3744876_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.5	9.7e-112
WP_001295431.1|3745097_3746783_+	two-component regulatory system sensor histidine kinase BtsS	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
WP_000598641.1|3746779_3747499_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_001295430.1|3747545_3748016_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	100.0	1.8e-82
WP_001373589.1|3748056_3748518_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	98.7	1.6e-75
WP_105394367.1|3748642_3750646_-	hypothetical protein	NA	Q9EYF6	Enterobacteria_phage	96.3	0.0e+00
WP_016243711.1|3750642_3751779_-	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	98.0	3.8e-163
>prophage 8
NZ_CP027140	Escherichia coli strain AR_0369 chromosome, complete genome	4625479	4297546	4345050	4625479	protease,lysis,integrase,transposase,tail	Enterobacteria_phage(30.3%)	63	4305122:4305137	4335725:4335740
WP_001260849.1|4297546_4298368_-|protease	serine protease	protease	NA	NA	NA	NA
WP_000233090.1|4298467_4298551_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000743952.1|4298643_4298979_-	acid shock protein	NA	NA	NA	NA	NA
WP_000091840.1|4299375_4300629_-	MFS transporter	NA	NA	NA	NA	NA
WP_001019525.1|4300735_4301629_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000225262.1|4301763_4302984_+	DNA-binding transcriptional repressor Mlc	NA	NA	NA	NA	NA
WP_000919231.1|4303108_4303804_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA	NA
WP_001315626.1|4303756_4305049_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA	NA
4305122:4305137	attL	CTTTAAGAGATAAAAA	NA	NA	NA	NA
WP_000148710.1|4305207_4305822_-	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	36.3	8.7e-29
WP_000526503.1|4305864_4306719_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
WP_000213028.1|4306720_4307338_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	59.6	9.5e-76
WP_001433342.1|4307348_4309772_-	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	48.6	2.8e-208
WP_016242148.1|4309832_4312259_-	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.2	1.0e-213
WP_001300836.1|4312457_4312763_-	DUF1161 domain-containing protein	NA	NA	NA	NA	NA
WP_001321287.1|4312870_4313581_+	YnfC family lipoprotein	NA	NA	NA	NA	NA
WP_001138581.1|4313583_4314144_-	spermidine N1-acetyltransferase	NA	NA	NA	NA	NA
WP_000705211.1|4314178_4314520_-	DUF1283 family protein	NA	NA	NA	NA	NA
WP_000598292.1|4314654_4314981_+	YnfA family protein	NA	A0A218MNG8	uncultured_virus	55.6	9.9e-24
WP_001295394.1|4315186_4316401_+	starvation-sensing protein RspA	NA	Q6A202	Oenococcus_phage	29.0	1.4e-46
WP_000836066.1|4316412_4317432_+	Zn-dependent oxidoreductase	NA	E3SJ82	Synechococcus_phage	26.2	4.3e-17
WP_001360138.1|4317489_4317600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021533434.1|4317619_4318900_-|integrase	site-specific integrase	integrase	B6DZ48	Enterobacteria_phage	62.3	6.6e-156
WP_000005552.1|4318934_4319186_-	excisionase family protein	NA	S4TND0	Salmonella_phage	50.0	2.2e-15
WP_000048324.1|4319258_4321730_-	exonuclease	NA	A0A192Y6E0	Salmonella_phage	56.7	8.5e-59
WP_001083280.1|4321823_4322015_-|lysis	lysis protein YdfD	lysis	NA	NA	NA	NA
WP_000854559.1|4322011_4322200_-	cell division inhibition protein DicB	NA	NA	NA	NA	NA
WP_000344954.1|4322686_4323262_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000379589.1|4323263_4323419_-	DUF1391 family protein	NA	M4QQ57	Salicola_phage	51.1	8.8e-07
WP_001003381.1|4323611_4324019_-	helix-turn-helix domain-containing protein	NA	I6PD69	Cronobacter_phage	46.2	2.5e-24
WP_000476993.1|4324096_4324324_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_000705349.1|4324307_4324829_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000054504.1|4324809_4325775_+	hypothetical protein	NA	U5P0A0	Shigella_phage	61.2	2.2e-55
WP_001151196.1|4325815_4326235_+	DUF977 family protein	NA	A0A0U2QQN3	Escherichia_phage	93.4	1.6e-55
WP_000589012.1|4326268_4327609_+|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
WP_001317460.1|4328045_4328378_-	protein flxA	NA	NA	NA	NA	NA
WP_071527819.1|4328580_4328886_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000534858.1|4328910_4329150_+	type II toxin-antitoxin system antitoxin RelB	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	54.4	1.6e-18
WP_000323025.1|4329149_4329437_+	type II toxin-antitoxin system mRNA interferase RelE	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	66.0	1.4e-29
WP_000813254.1|4329508_4329664_+	type I toxin-antitoxin system toxin HokD	NA	A0A0U2QV81	Escherichia_phage	96.1	1.5e-17
WP_000980994.1|4329880_4330132_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012304870.1|4330198_4330477_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001265198.1|4330478_4331528_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	57.3	1.3e-112
WP_001047135.1|4331541_4332294_+	antitermination protein	NA	A0A192Y5X6	Salmonella_phage	92.8	7.1e-134
WP_120795389.1|4332571_4332661_-	Qin prophage; protein YnfS	NA	NA	NA	NA	NA
WP_000087756.1|4332715_4332928_-	cold shock-like protein CspF	NA	NA	NA	NA	NA
WP_105394433.1|4333228_4333444_+	cold shock-like protein CspB	NA	A0A1W6JNX5	Morganella_phage	75.0	1.3e-24
WP_000839590.1|4334197_4334413_+|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	94.4	1.1e-31
WP_000189916.1|4334417_4334729_+	YdfR family protein	NA	K7PGU6	Enterobacteria_phage	64.6	2.0e-26
WP_001092971.1|4334725_4335259_+	lysozyme	NA	K7PLY1	Enterobacteria_phage	93.2	6.4e-97
WP_001071769.1|4335255_4335753_+	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	29.5	2.9e-06
4335725:4335740	attR	CTTTAAGAGATAAAAA	NA	NA	NA	NA
WP_000066495.1|4336115_4336328_+	cold shock protein CspI	NA	A0A1W6JNX5	Morganella_phage	74.3	1.2e-22
WP_071524604.1|4336338_4336527_+	cold-shock protein	NA	NA	NA	NA	NA
WP_120795388.1|4336529_4336595_+	Qin prophage; protein YnfR	NA	NA	NA	NA	NA
WP_001309517.1|4336674_4336830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001019139.1|4337001_4337175_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA	NA
WP_000035576.1|4337326_4337758_-	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	90.6	6.6e-60
WP_001031431.1|4338058_4338265_+	hypothetical protein	NA	A0A0K2FJ18	Enterobacteria_phage	91.2	6.7e-26
WP_000421825.1|4338825_4339365_+	DUF1441 family protein	NA	A5LH26	Enterobacteria_phage	100.0	1.8e-94
WP_123907347.1|4339439_4343456_+|tail	phage tail protein	tail	K7PGT9	Enterobacteria_phage	66.9	9.1e-244
WP_072144121.1|4343510_4343630_+	hypothetical protein	NA	K7PMH7	Enterobacteria_phage	84.6	3.1e-12
WP_000086530.1|4343727_4344318_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.3	8.1e-24
WP_000836768.1|4344634_4344868_-	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	88.3	1.1e-32
WP_120795384.1|4344936_4345050_-	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
>prophage 9
NZ_CP027140	Escherichia coli strain AR_0369 chromosome, complete genome	4625479	4496118	4557146	4625479	tail,holin,lysis,transposase	Enterobacteria_phage(29.41%)	51	NA	NA
WP_000826416.1|4496118_4497327_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SL42	Escherichia_phage	93.0	1.7e-206
WP_001261013.1|4497858_4498527_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_000586744.1|4498829_4499423_-	tellurite resistance methyltransferase TehB	NA	NA	NA	NA	NA
WP_001301046.1|4499419_4500412_-	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA	NA
WP_001234053.1|4500535_4501516_+	LbetaH domain-containing protein	NA	NA	NA	NA	NA
WP_000140885.1|4501510_4502047_-	50S ribosomal protein L7/L12-serine acetyltransferase	NA	NA	NA	NA	NA
WP_001296778.1|4502109_4502334_-	YdcH family protein	NA	NA	NA	NA	NA
WP_000375956.1|4502473_4504129_-	glucan biosynthesis protein OpgD	NA	NA	NA	NA	NA
WP_000013759.1|4504353_4505697_-	VOC family protein	NA	NA	NA	NA	NA
WP_000414564.1|4505913_4506837_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001098553.1|4506874_4508515_-	methyl-accepting chemotaxis protein Trg	NA	NA	NA	NA	NA
WP_085947770.1|4508890_4510259_+|transposase	IS3-like element IS150 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	100.0	1.3e-112
WP_001309484.1|4510359_4510509_+	type I toxin-antitoxin system toxin HokB	NA	NA	NA	NA	NA
WP_000731833.1|4510580_4510754_-	periplasmic protein	NA	A0A0R6PKG1	Moraxella_phage	67.4	4.4e-07
WP_000428998.1|4510998_4511529_-	cytochrome b561	NA	A0A0U2QLA7	Escherichia_phage	44.9	3.1e-19
WP_000048667.1|4511717_4512719_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000115916.1|4512760_4514200_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_001027964.1|4514396_4515197_-	YdcF family protein	NA	NA	NA	NA	NA
WP_000139545.1|4515468_4519371_-	ATP-dependent RNA helicase HrpA	NA	A0A1V0SIV3	Klosneuvirus	29.5	2.2e-53
WP_000048950.1|4519571_4520177_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
WP_000627356.1|4520230_4521547_-	phosphatase PAP2/dual specificity phosphatase family protein	NA	NA	NA	NA	NA
WP_000431844.1|4521536_4523294_-	bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000890941.1|4523309_4524206_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000177526.1|4524205_4524811_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA	NA
WP_000471496.1|4524981_4527288_-	DUF2773 domain-containing bactofilin	NA	NA	NA	NA	NA
WP_000097801.1|4527351_4528212_-	pyridoxine 4-dehydrogenase	NA	NA	NA	NA	NA
WP_001067519.1|4531517_4532423_+	transcriptional regulator FeaR	NA	NA	NA	NA	NA
WP_001300734.1|4532594_4532921_-	YdbL family protein	NA	NA	NA	NA	NA
WP_000698145.1|4532928_4533114_-	YnbE family lipoprotein	NA	NA	NA	NA	NA
WP_000900976.1|4533110_4535750_-	YdbH family protein	NA	NA	NA	NA	NA
WP_000762229.1|4535957_4536947_+	D-lactate dehydrogenase	NA	M1I4S0	Paramecium_bursaria_Chlorella_virus	44.0	2.5e-70
WP_001296048.1|4537057_4537480_+	heat shock protein HslJ	NA	NA	NA	NA	NA
WP_001295715.1|4537476_4537743_-	DUF333 domain-containing protein	NA	NA	NA	NA	NA
WP_000628243.1|4538016_4541541_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA	NA
WP_105394445.1|4541907_4543041_+	porin OmpN	NA	Q1MVN1	Enterobacteria_phage	58.8	6.3e-118
WP_001300461.1|4543181_4543616_+	universal stress protein UspF	NA	A0A1W6JNV4	Morganella_phage	52.8	1.8e-28
WP_113328759.1|4544225_4545116_+	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA	NA
WP_032178069.1|4545115_4545943_+	iron/manganese ABC transporter ATP-binding protein SitB	NA	M1IB70	Acanthocystis_turfacea_Chlorella_virus	26.4	2.8e-06
WP_001101728.1|4545939_4546797_+	iron/manganese ABC transporter permease subunit SitC	NA	NA	NA	NA	NA
WP_105394446.1|4546793_4547651_+	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA	NA
WP_072129246.1|4547864_4547993_-|tail	phage tail protein	tail	K7PMH7	Enterobacteria_phage	90.5	1.6e-14
WP_105394467.1|4548047_4549709_-|tail	phage tail protein	tail	K7PGT9	Enterobacteria_phage	75.6	2.6e-176
WP_105394447.1|4551368_4552163_-	ParB N-terminal domain-containing protein	NA	R4TG31	Halovirus	40.7	1.3e-48
WP_105394449.1|4552300_4553758_-	potassium transporter TrkG	NA	NA	NA	NA	NA
WP_001228696.1|4553954_4554140_-|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	98.2	2.8e-15
WP_001194112.1|4554356_4554833_-	glycoside hydrolase family protein	NA	K7PKV2	Enterobacteria_phage	96.2	2.3e-85
WP_000781775.1|4554836_4555178_-|holin	phage holin, lambda family	holin	Q8SBE1	Shigella_phage	90.1	6.2e-53
WP_052921396.1|4555254_4555557_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001208722.1|4555525_4556095_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105394450.1|4556316_4556859_-	DUF1133 family protein	NA	A0A0U2S606	Escherichia_phage	75.1	9.8e-77
WP_001741607.1|4556855_4557146_-	DUF1364 domain-containing protein	NA	A0A0U2KD41	Escherichia_phage	89.6	3.3e-47
>prophage 10
NZ_CP027140	Escherichia coli strain AR_0369 chromosome, complete genome	4625479	4560399	4578950	4625479	tRNA,integrase	Escherichia_phage(71.43%)	23	4549960:4549973	4573670:4573683
4549960:4549973	attL	TCGCCTTCTTCAAT	NA	NA	NA	NA
WP_000385105.1|4560399_4561554_-	AAA family ATPase	NA	A0A2H4UTU5	Bodo_saltans_virus	31.3	1.9e-13
WP_105394452.1|4561747_4562179_-	DUF977 family protein	NA	A0A0U2QQN3	Escherichia_phage	91.2	3.8e-63
WP_123907341.1|4562194_4562956_-	DUF1627 domain-containing protein	NA	A0A0U2SAW4	Escherichia_phage	86.6	4.9e-114
WP_016239945.1|4562978_4563725_-	ATP-binding protein	NA	V5UQI5	Shigella_phage	79.7	1.5e-112
WP_001396581.1|4563731_4564520_-	hypothetical protein	NA	G9L6A8	Escherichia_phage	64.3	2.0e-41
WP_000693803.1|4564597_4565020_-	hypothetical protein	NA	A0A0U2RXZ9	Escherichia_phage	92.9	1.3e-68
WP_001072342.1|4565016_4565271_-	hypothetical protein	NA	A0A2I6PIE5	Escherichia_phage	61.6	1.3e-18
WP_000233319.1|4565350_4565770_+	helix-turn-helix domain-containing protein	NA	A0A2I6PIE7	Escherichia_phage	46.5	5.5e-19
WP_001169151.1|4566202_4566358_+	YdaF family protein	NA	M4QQ57	Salicola_phage	55.3	6.1e-08
WP_001312793.1|4566354_4566843_-	superinfection exclusion protein B	NA	NA	NA	NA	NA
WP_000560223.1|4567283_4567505_+	killing protein KilR	NA	A0A0U2RTC4	Escherichia_phage	98.6	2.0e-36
WP_001352098.1|4567504_4567675_+	conserved protein, Rac prophage	NA	A0A0U2SHB5	Escherichia_phage	71.4	3.6e-17
WP_000632297.1|4567749_4568025_+	protein RacC	NA	A0A0U2QW85	Escherichia_phage	96.7	1.4e-42
WP_000105139.1|4568126_4570727_+	exodeoxyribonuclease VIII	NA	A0A0U2I1R6	Escherichia_phage	63.6	7.9e-249
WP_000166319.1|4570719_4571529_+	recombination protein RecT	NA	A0A1P8DTF2	Proteus_phage	71.5	8.8e-106
WP_001317028.1|4571585_4571780_+	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	NA	A0A0U2QQP4	Escherichia_phage	96.9	5.8e-32
WP_000276809.1|4571772_4571982_+	double-strand break reduction protein RcbA	NA	A0A0U2QL97	Escherichia_phage	98.4	6.1e-27
WP_000079604.1|4572060_4572276_+	excisionase XisR	NA	A0A0U2RY08	Escherichia_phage	100.0	1.8e-37
WP_000040852.1|4572277_4573513_+|integrase	site-specific integrase	integrase	A0A0U2JGI6	Escherichia_phage	98.8	5.5e-240
WP_001157407.1|4573564_4574500_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	98.8	5.9e-146
4573670:4573683	attR	ATTGAAGAAGGCGA	NA	NA	NA	NA
WP_000123737.1|4574628_4576002_-	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.1	6.6e-53
WP_000387388.1|4576479_4577463_-	zinc transporter ZntB	NA	NA	NA	NA	NA
WP_105394468.1|4577717_4578950_+	diguanylate cyclase DgcM	NA	A0A127AWB9	Bacillus_phage	39.5	3.1e-17
>prophage 1
NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	90735	61956	68675	90735	transposase	Escherichia_phage(25.0%)	9	NA	NA
WP_000027057.1|61956_62817_-	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
WP_001067855.1|63107_63812_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000571065.1|63907_64417_+	trimethoprim-resistant dihydrofolate reductase DfrA8	NA	A0A1Y0SUI9	Pseudomonas_phage	38.8	6.5e-14
WP_000144779.1|64413_65070_+	hypothetical protein	NA	A0A2H4P756	Pseudomonas_phage	43.7	7.0e-45
WP_001067855.1|65106_65811_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_011264039.1|65883_66123_+	macrolide transporter	NA	A0A2K5B2B5	Erysipelothrix_phage	46.2	9.5e-08
WP_000612791.1|66268_67132_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	31.0	2.5e-05
WP_001354008.1|67169_67415_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000034420.1|67883_68675_+	sulfonamide-resistant dihydropteroate synthase Sul3	NA	A0A0B5J4J5	Pandoravirus	26.5	1.2e-14
>prophage 1
NZ_CP027135	Escherichia coli strain AR_0369 plasmid unnamed3	151026	47301	107427	151026	transposase,integrase	Escherichia_phage(23.81%)	57	81814:81830	99615:99631
WP_105394066.1|47301_48204_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	53.0	1.0e-65
WP_001247862.1|48268_48535_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000218863.1|48628_49063_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000117611.1|49791_50292_-	antirestriction protein ArdA	NA	G9FHQ1	Rhodococcus_virus	27.3	2.4e-05
WP_000977995.1|50753_51350_-	hypothetical protein	NA	A0A0N7KZV3	Escherichia_phage	56.6	9.0e-15
WP_001276270.1|51346_52066_-	plasmid SOS inhibition protein A	NA	NA	NA	NA	NA
WP_001387500.1|52062_52497_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
WP_105394067.1|52551_54510_-	ParB/RepB/Spo0J family partition protein	NA	G8DH78	Emiliania_huxleyi_virus	29.6	5.6e-21
WP_000006020.1|54568_54802_-	DUF905 domain-containing protein	NA	A0A096XUX0	Cronobacter_phage	53.2	1.7e-06
WP_001276120.1|54859_55387_-	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	73.5	1.6e-47
WP_001434357.1|55770_56085_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001027495.1|56155_56347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001378618.1|56343_56766_-	DUF1380 family protein	NA	NA	NA	NA	NA
WP_001671341.1|56812_57115_-	antirestriction protein	NA	NA	NA	NA	NA
WP_000274500.1|58476_58911_-	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
WP_001104881.1|58924_59146_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000086147.1|59146_59830_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.4	1.1e-29
WP_031942433.1|59905_60217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105394068.1|60213_61185_-	DUF1281 domain-containing protein	NA	NA	NA	NA	NA
WP_000618111.1|61533_61782_+	DinI-like family protein	NA	Q2A098	Sodalis_phage	49.3	1.1e-14
WP_000109071.1|61778_62216_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	48.4	8.3e-26
WP_063077240.1|62215_63490_+	Y-family DNA polymerase	NA	F1C5A5	Cronobacter_phage	60.4	7.6e-144
WP_001278818.1|63491_63908_-	recombinase	NA	NA	NA	NA	NA
WP_000688514.1|63900_64881_-	recombinase	NA	A0A0A7NPX4	Enterobacteria_phage	51.4	1.7e-79
WP_000030199.1|65294_65603_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001144036.1|65689_66334_-	ParA family protein	NA	NA	NA	NA	NA
WP_001164198.1|66513_67293_-|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	95.6	4.0e-55
WP_000465034.1|67294_67708_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001261286.1|68241_68472_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001034044.1|68468_68885_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_001128474.1|68959_70525_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_000361402.1|70509_71532_+	helicase UvrD	NA	NA	NA	NA	NA
WP_000973519.1|72997_75199_-	ferric aerobactin receptor IutA	NA	NA	NA	NA	NA
WP_000750130.1|75280_76558_-	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA	NA
WP_001015721.1|76554_78297_-	aerobactin synthase IucC	NA	NA	NA	NA	NA
WP_000011908.1|78296_79244_-	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA	NA
WP_044068371.1|79244_80969_-	aerobactin synthase IucA	NA	NA	NA	NA	NA
WP_000095526.1|81104_82298_+	MFS transporter	NA	NA	NA	NA	NA
81814:81830	attL	TTGGACTTTCGCCAGCC	NA	NA	NA	NA
WP_001318207.1|82677_83058_-	fluoride efflux transporter CrcB	NA	A0A2H4J148	uncultured_Caudovirales_phage	55.0	1.9e-26
WP_000968139.1|84300_85158_-	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA	NA
WP_001101723.1|85154_86012_-	iron/manganese ABC transporter permease subunit SitC	NA	NA	NA	NA	NA
WP_000983710.1|86008_86836_-	iron/manganese ABC transporter ATP-binding protein SitB	NA	A0A1M7XV31	Cedratvirus	27.0	3.6e-14
WP_000949005.1|86835_87750_-	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA	NA
WP_000361611.1|90731_91709_+	RepB family plasmid replication initiator protein	NA	J9Q7H0	Salmonella_phage	63.9	4.6e-101
WP_001066953.1|91993_92734_-|integrase	site-specific integrase	integrase	I3WFA4	Macacine_betaherpesvirus	57.6	2.0e-24
WP_001309252.1|92854_93043_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001072358.1|93409_94579_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001322642.1|95425_95698_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_001496335.1|96940_98911_+	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_000977394.1|98917_99709_+	DUF4198 domain-containing protein	NA	NA	NA	NA	NA
99615:99631	attR	GGCTGGCGAAAGTCCAA	NA	NA	NA	NA
WP_001297096.1|100447_101227_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255956.1|101226_102249_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	99.1	1.0e-199
WP_024193849.1|103328_103703_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	100.0	9.8e-60
WP_001067855.1|103727_104432_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_063840321.1|104575_105130_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA	NA
WP_001334766.1|105260_106091_+	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA	NA
WP_001067855.1|106722_107427_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
