The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP020006	Haemophilus influenzae strain 48P106H1 chromosome, complete genome	1857175	80573	92669	1857175	tRNA	Vibrio_phage(14.29%)	11	NA	NA
WP_005658393.1|80573_82697_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A2I7QNQ7	Vibrio_phage	62.8	1.6e-260
WP_005687536.1|82814_83675_+	acyl-CoA thioesterase II	NA	NA	NA	NA	NA
WP_005687538.1|83835_85215_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	29.7	6.6e-53
WP_005652519.1|85317_85827_+	peptidyl-prolyl cis-trans isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	32.9	7.2e-13
WP_005687540.1|85881_86688_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_005687542.1|86731_87265_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005658381.1|87323_87647_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	43.4	2.0e-16
WP_005658379.1|87766_88762_-	2-hydroxyacid dehydrogenase	NA	M1H502	Paramecium_bursaria_Chlorella_virus	39.9	6.4e-66
WP_074032767.1|88774_89920_-	methionine biosynthesis PLP-dependent protein	NA	A0A141ZJM2	Faustovirus	26.8	1.1e-13
WP_005653598.1|90475_91312_+	ParA family protein	NA	NA	NA	NA	NA
WP_005687545.1|91313_92669_+	replicative DNA helicase	NA	O80281	Escherichia_phage	43.6	3.4e-94
>prophage 2
NZ_CP020006	Haemophilus influenzae strain 48P106H1 chromosome, complete genome	1857175	1297397	1305915	1857175		Planktothrix_phage(16.67%)	8	NA	NA
WP_005686497.1|1297397_1298381_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.2	1.4e-20
WP_005686498.1|1298383_1299376_-	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.8	5.7e-14
WP_005686499.1|1299385_1300273_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_074032816.1|1300287_1301259_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_074032815.1|1301378_1303562_-	DNA helicase II	NA	A7KV33	Bacillus_phage	37.6	1.8e-116
WP_005686506.1|1304177_1304813_-	7-carboxy-7-deazaguanine synthase QueE	NA	S4TZT1	uncultured_phage	30.3	8.7e-16
WP_005647466.1|1304813_1305239_-	6-carboxytetrahydropterin synthase QueD	NA	A0A1U9WRB3	Streptococcus_virus	42.7	7.8e-21
WP_005686508.1|1305231_1305915_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	50.7	2.3e-54
>prophage 3
NZ_CP020006	Haemophilus influenzae strain 48P106H1 chromosome, complete genome	1857175	1493942	1500621	1857175		Sodalis_phage(16.67%)	10	NA	NA
WP_005688173.1|1493942_1494233_+	integration host factor subunit alpha	NA	Q2A099	Sodalis_phage	38.2	1.5e-10
WP_005688175.1|1494285_1494771_+	endopeptidase	NA	A0A2H5BM69	Streptomyces_phage	39.3	2.3e-16
WP_012054395.1|1494836_1495790_+	WYL domain-containing transcriptional regulator	NA	NA	NA	NA	NA
WP_005688179.1|1495848_1496304_+	hypothetical protein	NA	I6X231	Vibriophage	63.0	3.5e-43
WP_005671438.1|1496287_1496998_+	NAD-dependent deacylase	NA	R9TG77	Vibrio_phage	40.1	3.2e-27
WP_005688182.1|1497076_1497571_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005688183.1|1497584_1498301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005688186.1|1498358_1499360_-	cytochrome c	NA	Q9JMN3	Wolbachia_phage	39.8	5.4e-20
WP_005688188.1|1499578_1499779_+	cell division protein FtsK	NA	NA	NA	NA	NA
WP_005688189.1|1499775_1500621_+	NAD-dependent deacetylase	NA	A0A1C3S788	Escherichia_phage	22.9	7.0e-05
>prophage 4
NZ_CP020006	Haemophilus influenzae strain 48P106H1 chromosome, complete genome	1857175	1560758	1566952	1857175		Mannheimia_phage(57.14%)	13	NA	NA
WP_005687157.1|1560758_1561025_+	hypothetical protein	NA	A0A0N9STP5	Staphylococcus_phage	49.2	5.6e-09
WP_080281386.1|1561010_1561409_-	hypothetical protein	NA	A0A0M3LPU3	Mannheimia_phage	48.6	5.3e-11
WP_005650500.1|1561576_1561798_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005650502.1|1561812_1561983_+	DUF1508 domain-containing protein	NA	NA	NA	NA	NA
WP_005687161.1|1562458_1562938_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005687162.1|1562939_1563869_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005687164.1|1563936_1564593_-	LexA family transcriptional regulator	NA	A0A0M3LSL8	Mannheimia_phage	58.9	5.5e-66
WP_005687166.1|1564723_1564930_+	helix-turn-helix transcriptional regulator	NA	A0A0M3LSY2	Mannheimia_phage	67.7	1.9e-17
WP_005687168.1|1564950_1565247_+	hypothetical protein	NA	Q7Y5W3	Haemophilus_phage	68.4	5.8e-31
WP_005687170.1|1565294_1565906_+	hypothetical protein	NA	D0UIL6	Aggregatibacter_phage	45.3	1.7e-40
WP_005653907.1|1566062_1566245_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA	NA
WP_005653910.1|1566276_1566726_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_005687174.1|1566769_1566952_-	hypothetical protein	NA	A0A0M3LQV3	Mannheimia_phage	45.5	1.2e-05
>prophage 5
NZ_CP020006	Haemophilus influenzae strain 48P106H1 chromosome, complete genome	1857175	1575338	1587337	1857175	tRNA	Acinetobacter_phage(42.86%)	11	NA	NA
WP_005687191.1|1575338_1578203_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.5	2.3e-148
WP_005659477.1|1578236_1578509_-	hydrogenase maturation factor HybG	NA	NA	NA	NA	NA
WP_079995721.1|1578570_1580004_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	NA	A0A0P0IR83	Acinetobacter_phage	38.0	1.2e-33
WP_005687194.1|1580041_1581043_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	39.6	4.4e-46
WP_005662273.1|1581095_1581482_-	tautomerase family protein	NA	NA	NA	NA	NA
WP_005687195.1|1581530_1582118_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	40.0	2.2e-34
WP_005687196.1|1582130_1583687_-	anthranilate synthase component I	NA	A0A0B5J984	Pandoravirus	33.2	2.4e-22
WP_080316606.1|1583788_1584691_-	glycosyltransferase	NA	A7IW34	Paramecium_bursaria_Chlorella_virus	29.7	2.9e-17
WP_005656740.1|1584813_1585311_-	non-heme ferritin	NA	NA	NA	NA	NA
WP_005650594.1|1585326_1585815_-	non-heme ferritin	NA	NA	NA	NA	NA
WP_074031221.1|1586332_1587337_+	phosphate ABC transporter substrate-binding protein PstS	NA	A0A222YW41	Synechococcus_phage	40.5	1.2e-51
