The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016608	Xylella fastidiosa strain Salento-1 chromosome, complete genome	2508097	767226	779409	2508097	integrase,tRNA	Xylella_phage(33.33%)	12	761609:761623	784593:784607
761609:761623	attL	CGTGCTGTACTACGG	NA	NA	NA	NA
WP_046420592.1|767226_768639_-	DEAD/DEAH box helicase	NA	C8CLF7	Xylella_phage	94.9	2.5e-225
WP_060870121.1|768635_769313_-	KilA-N domain-containing protein	NA	A0A1W6JP13	Morganella_phage	41.1	6.2e-12
WP_046420589.1|769415_769721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046420587.1|769722_770001_-	VRR-NUC domain-containing protein	NA	C8CLF9	Xylella_phage	96.7	1.1e-44
WP_060871515.1|771590_771905_+	hypothetical protein	NA	C8CLF7	Xylella_phage	95.9	5.6e-32
WP_046420585.1|771901_772198_+	DUF4224 domain-containing protein	NA	A0A2H4JF29	uncultured_Caudovirales_phage	48.1	4.5e-07
WP_046420583.1|772209_773271_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	52.7	1.4e-95
WP_046420580.1|773528_774224_-	energy transducer TonB	NA	NA	NA	NA	NA
WP_010894734.1|774345_775626_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.2	6.5e-95
WP_046420578.1|776431_777385_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010894730.1|777682_778477_+	ParA family protein	NA	A0A0K2FLP4	Brevibacillus_phage	29.7	8.0e-19
WP_046420575.1|778476_779409_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	36.6	6.3e-15
784593:784607	attR	CCGTAGTACAGCACG	NA	NA	NA	NA
>prophage 2
NZ_CP016608	Xylella fastidiosa strain Salento-1 chromosome, complete genome	2508097	1138355	1151508	2508097	coat	Stenotrophomonas_phage(62.5%)	20	NA	NA
WP_046419278.1|1138355_1139531_+	replication initiation factor	NA	S0F3F7	Stenotrophomonas_phage	45.5	2.5e-77
WP_046419276.1|1139576_1139891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046419274.1|1140014_1140266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011097859.1|1140285_1140414_+	hypothetical protein	NA	NA	NA	NA	NA
WP_104993177.1|1140547_1141837_+	hypothetical protein	NA	Q94MX3	Xanthomonas_phage	48.3	9.1e-20
WP_085808098.1|1141849_1142179_+|coat	phage coat protein	coat	NA	NA	NA	NA
WP_085808099.1|1142178_1143513_+	Zonular occludens toxin	NA	Q4LAU4	Stenotrophomonas_phage	49.3	7.2e-113
WP_057683733.1|1143652_1143931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060871500.1|1143993_1144341_-	hypothetical protein	NA	Q38057	Xanthomonas_phage	32.4	3.4e-06
WP_060870210.1|1144490_1144904_-	DUF3693 domain-containing protein	NA	S0F314	Stenotrophomonas_phage	38.5	3.7e-15
WP_046420105.1|1145045_1145381_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081089932.1|1145382_1145640_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046419283.1|1145643_1145826_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046419278.1|1146351_1147527_+	replication initiation factor	NA	S0F3F7	Stenotrophomonas_phage	45.5	2.5e-77
WP_046419276.1|1147572_1147887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046419274.1|1148009_1148261_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011097859.1|1148280_1148409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_104993177.1|1148542_1149832_+	hypothetical protein	NA	Q94MX3	Xanthomonas_phage	48.3	9.1e-20
WP_085808098.1|1149844_1150174_+|coat	phage coat protein	coat	NA	NA	NA	NA
WP_085808105.1|1150173_1151508_+	Zonular occludens toxin	NA	Q4LAU4	Stenotrophomonas_phage	49.3	5.5e-113
>prophage 3
NZ_CP016608	Xylella fastidiosa strain Salento-1 chromosome, complete genome	2508097	1186354	1207125	2508097		Xylella_phage(100.0%)	19	NA	NA
WP_046419225.1|1186354_1187857_-	hypothetical protein	NA	C8CLJ8	Xylella_phage	86.7	6.7e-224
WP_046419223.1|1187853_1188636_-	hypothetical protein	NA	C8CLJ7	Xylella_phage	88.5	7.4e-126
WP_060872308.1|1188671_1189070_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046419799.1|1189066_1190371_-	hypothetical protein	NA	C8CLJ3	Xylella_phage	83.4	2.6e-184
WP_046419220.1|1192065_1192773_-	hypothetical protein	NA	C8CLJ1	Xylella_phage	70.6	1.2e-77
WP_046419219.1|1192803_1193049_-	hypothetical protein	NA	C8CLJ0	Xylella_phage	97.2	1.6e-34
WP_046419217.1|1193018_1194947_-	hypothetical protein	NA	C8CLI9	Xylella_phage	95.2	0.0e+00
WP_046419214.1|1194943_1195351_-	hypothetical protein	NA	C8CLI8	Xylella_phage	98.5	1.3e-68
WP_046419213.1|1195371_1196598_-	hypothetical protein	NA	C8CLI7	Xylella_phage	92.9	1.6e-215
WP_046419211.1|1196646_1197501_-	hypothetical protein	NA	C8CLI6	Xylella_phage	78.5	8.4e-107
WP_046419208.1|1197502_1199575_-	hypothetical protein	NA	C8CLI5	Xylella_phage	97.5	0.0e+00
WP_080939574.1|1199577_1200993_-	DNA packaging protein	NA	C8CLI4	Xylella_phage	98.9	2.8e-280
WP_046419203.1|1200901_1201228_-	hypothetical protein	NA	C8CLI3	Xylella_phage	96.3	1.7e-52
WP_046419200.1|1201227_1201542_-	hypothetical protein	NA	C8CLI2	Xylella_phage	95.2	2.0e-50
WP_046419794.1|1201541_1202084_-	hypothetical protein	NA	C8CLI0	Xylella_phage	87.8	2.4e-75
WP_053014138.1|1202080_1202578_-	lysozyme	NA	C8CLH9	Xylella_phage	94.4	4.3e-87
WP_046419792.1|1202558_1202783_-	hypothetical protein	NA	C8CLH8	Xylella_phage	97.3	5.5e-34
WP_046419194.1|1203897_1206426_-	DNA primase	NA	C8CLH6	Xylella_phage	75.8	0.0e+00
WP_046419191.1|1206561_1207125_-	hypothetical protein	NA	C8CLH5	Xylella_phage	69.7	2.3e-68
>prophage 4
NZ_CP016608	Xylella fastidiosa strain Salento-1 chromosome, complete genome	2508097	1210934	1221051	2508097		Xylella_phage(100.0%)	11	NA	NA
WP_046419172.1|1210934_1211450_+	hypothetical protein	NA	C8CLG9	Xylella_phage	36.6	2.9e-09
WP_046419166.1|1211837_1212305_+	DUF1566 domain-containing protein	NA	NA	NA	NA	NA
WP_004088054.1|1212301_1212703_+	hypothetical protein	NA	C8CLG7	Xylella_phage	97.7	3.6e-68
WP_046419163.1|1212699_1212894_+	hypothetical protein	NA	C8CLG6	Xylella_phage	89.1	1.4e-25
WP_046419160.1|1212925_1213120_+	hypothetical protein	NA	C8CLG5	Xylella_phage	71.4	4.5e-16
WP_046419156.1|1213608_1214886_+	DUF2800 domain-containing protein	NA	C8CLG3	Xylella_phage	87.7	3.1e-214
WP_020851622.1|1214885_1215452_+	DUF2815 family protein	NA	C8CLG2	Xylella_phage	98.4	5.8e-104
WP_080939573.1|1215519_1216674_+	hypothetical protein	NA	C8CLG1	Xylella_phage	89.7	7.7e-196
WP_046420587.1|1218821_1219100_+	VRR-NUC domain-containing protein	NA	C8CLF9	Xylella_phage	96.7	1.1e-44
WP_046420063.1|1219101_1219548_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046420062.1|1219632_1221051_+	DEAD/DEAH box helicase	NA	C8CLF7	Xylella_phage	98.1	1.5e-273
>prophage 5
NZ_CP016608	Xylella fastidiosa strain Salento-1 chromosome, complete genome	2508097	1289998	1300169	2508097	tail,plate	Salmonella_phage(25.0%)	14	NA	NA
WP_046419977.1|1289998_1290331_-	DNA-binding transcriptional regulator	NA	A0A0P0IRJ4	Acinetobacter_phage	40.7	1.6e-16
WP_046419976.1|1290605_1292597_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_046420067.1|1292849_1293419_+	SocA family protein	NA	I6R0L8	Salmonella_phage	40.7	1.3e-18
WP_046419974.1|1293418_1293646_+	hypothetical protein	NA	C8CLJ6	Xylella_phage	66.1	2.0e-15
WP_046419971.1|1293646_1294810_-|tail	tail fiber protein	tail	H9C1B7	Pectobacterium_phage	38.5	9.0e-19
WP_046419969.1|1294813_1295374_-	DUF2612 domain-containing protein	NA	A0A0M5M1K4	Salmonella_phage	26.8	8.5e-07
WP_046419967.1|1295370_1296516_-|plate	baseplate J/gp47 family protein	plate	D0UIH5	Aggregatibacter_phage	49.0	5.3e-96
WP_004085590.1|1296618_1296915_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	54.7	9.0e-24
WP_004085592.1|1296917_1297211_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	37.9	6.2e-09
WP_046419963.1|1297266_1297620_-	hypothetical protein	NA	Q7Y5S5	Haemophilus_phage	51.0	4.1e-23
WP_046419962.1|1297616_1298258_-	hypothetical protein	NA	A0A0M5M1K7	Salmonella_phage	37.3	2.5e-31
WP_046419672.1|1298254_1299085_-	hypothetical protein	NA	D0UIH8	Aggregatibacter_phage	51.8	6.8e-77
WP_046419669.1|1299081_1299399_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419667.1|1299398_1300169_-	hypothetical protein	NA	Q7Y5T0	Haemophilus_phage	34.1	1.4e-28
>prophage 6
NZ_CP016608	Xylella fastidiosa strain Salento-1 chromosome, complete genome	2508097	1316244	1323850	2508097		Burkholderia_phage(25.0%)	9	NA	NA
WP_023907472.1|1316244_1316742_-	lysozyme	NA	A0A2I7RLY1	Vibrio_phage	53.1	2.3e-27
WP_004085696.1|1316945_1317284_-	BrnA antitoxin family protein	NA	K4NZP3	Burkholderia_phage	54.9	1.0e-07
WP_010894061.1|1317270_1317537_-	hypothetical protein	NA	K4NX81	Burkholderia_phage	40.7	8.1e-08
WP_046419893.1|1318549_1318960_-	hypothetical protein	NA	A0A088F6Y8	Sulfitobacter_phage	42.1	3.2e-11
WP_046419785.1|1318965_1320426_-	replicative DNA helicase	NA	O80281	Escherichia_phage	39.7	5.7e-71
WP_046419782.1|1320828_1321290_-	hypothetical protein	NA	A0A0F7LAQ7	uncultured_marine_virus	36.9	8.2e-08
WP_046419776.1|1321662_1321941_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053014142.1|1321919_1323032_-	hypothetical protein	NA	C8CLG1	Xylella_phage	59.5	3.3e-111
WP_046419774.1|1323064_1323850_-	hypothetical protein	NA	C8CLH5	Xylella_phage	55.9	2.1e-27
>prophage 7
NZ_CP016608	Xylella fastidiosa strain Salento-1 chromosome, complete genome	2508097	1329370	1337688	2508097	integrase	Xylella_phage(45.45%)	13	1329910:1329922	1338290:1338302
WP_046419752.1|1329370_1329760_+	hypothetical protein	NA	C8CLG8	Xylella_phage	78.6	1.7e-17
WP_046419749.1|1329759_1330176_+	hypothetical protein	NA	C8CLG7	Xylella_phage	73.9	3.0e-49
1329910:1329922	attL	GCCGGTACGTTGT	NA	NA	NA	NA
WP_046419748.1|1330172_1330364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080939592.1|1330407_1330683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046419746.1|1330705_1330897_+	hypothetical protein	NA	C8CLG6	Xylella_phage	78.1	2.8e-18
WP_046419745.1|1330917_1331262_+	hypothetical protein	NA	U5P4J6	Shigella_phage	45.5	3.0e-15
WP_046419741.1|1331301_1332123_+	YfdQ family protein	NA	K7ZMK3	Xanthomonas_citri_phage	43.3	5.2e-53
WP_046419739.1|1332138_1333056_+	phage recombination protein Bet	NA	U6C6J0	Ralstonia_phage	48.7	4.6e-58
WP_046419737.1|1333052_1334687_+	hypothetical protein	NA	U6C712	Ralstonia_phage	38.2	6.8e-97
WP_046419912.1|1335058_1335889_+	hypothetical protein	NA	Q3LZN7	Bacteriophage	46.7	1.8e-21
WP_046419733.1|1335955_1336402_+	single-stranded DNA-binding protein	NA	L7TJL2	Pseudomonas_virus	52.9	1.1e-33
WP_060870176.1|1336420_1336669_+	DUF4224 domain-containing protein	NA	C8CLF5	Xylella_phage	81.7	8.0e-34
WP_046419731.1|1336668_1337688_+|integrase	tyrosine-type recombinase/integrase	integrase	C8CLF4	Xylella_phage	87.9	5.4e-169
1338290:1338302	attR	ACAACGTACCGGC	NA	NA	NA	NA
>prophage 8
NZ_CP016608	Xylella fastidiosa strain Salento-1 chromosome, complete genome	2508097	1383227	1392722	2508097	tail,plate	Salmonella_phage(25.0%)	15	NA	NA
WP_004085592.1|1383227_1383521_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	37.9	6.2e-09
WP_046419676.1|1383576_1383930_-	hypothetical protein	NA	Q7Y5S5	Haemophilus_phage	47.0	9.1e-23
WP_060870179.1|1384844_1385861_+	peptidase M4 family protein	NA	NA	NA	NA	NA
WP_081089730.1|1385868_1386222_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060871504.1|1386245_1386518_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_081089935.1|1386489_1387056_+	SocA family protein	NA	I6R0L8	Salmonella_phage	33.1	1.4e-17
WP_046419974.1|1387055_1387283_+	hypothetical protein	NA	C8CLJ6	Xylella_phage	66.1	2.0e-15
WP_046419971.1|1387283_1388447_-|tail	tail fiber protein	tail	H9C1B7	Pectobacterium_phage	38.5	9.0e-19
WP_046419969.1|1388450_1389011_-	DUF2612 domain-containing protein	NA	A0A0M5M1K4	Salmonella_phage	26.8	8.5e-07
WP_046419967.1|1389007_1390153_-|plate	baseplate J/gp47 family protein	plate	D0UIH5	Aggregatibacter_phage	49.0	5.3e-96
WP_004085590.1|1390255_1390552_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	54.7	9.0e-24
WP_004085592.1|1390554_1390848_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	37.9	6.2e-09
WP_046419963.1|1390903_1391257_-	hypothetical protein	NA	Q7Y5S5	Haemophilus_phage	51.0	4.1e-23
WP_046419962.1|1391253_1391895_-	hypothetical protein	NA	A0A0M5M1K7	Salmonella_phage	37.3	2.5e-31
WP_046419672.1|1391891_1392722_-	hypothetical protein	NA	D0UIH8	Aggregatibacter_phage	51.8	6.8e-77
>prophage 9
NZ_CP016608	Xylella fastidiosa strain Salento-1 chromosome, complete genome	2508097	1397229	1419515	2508097	integrase,terminase,head	Haemophilus_phage(25.0%)	31	1414286:1414299	1418696:1418709
WP_004087249.1|1397229_1397667_-	DUF3277 family protein	NA	Q7Y5T4	Haemophilus_phage	63.1	3.6e-45
WP_046419658.1|1397676_1399173_-	DUF3383 domain-containing protein	NA	Q7Y5T5	Haemophilus_phage	47.8	1.9e-122
WP_080939589.1|1399173_1399644_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419655.1|1399630_1399999_-	hypothetical protein	NA	Q776V7	Haemophilus_phage	42.9	2.8e-19
WP_046419654.1|1399985_1400465_-	hypothetical protein	NA	M4SN98	Psychrobacter_phage	28.0	8.6e-08
WP_046419652.1|1400461_1400830_-	DUF4054 domain-containing protein	NA	Q7Y5T9	Haemophilus_phage	38.1	1.7e-11
WP_046419651.1|1400829_1401183_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419650.1|1401248_1402232_-	DUF2184 domain-containing protein	NA	A0A2R3UA82	Siphoviridae_environmental_samples	39.0	1.1e-49
WP_046419648.1|1402241_1402724_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419647.1|1402751_1403942_-	DUF2213 domain-containing protein	NA	H9C194	Pectobacterium_phage	41.7	2.1e-39
WP_046419646.1|1403941_1404787_-|head	phage head morphogenesis protein	head	Q7Y5U5	Haemophilus_phage	32.3	1.6e-28
WP_046419644.1|1404859_1405198_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_046419643.1|1405194_1405476_+	XRE family transcriptional regulator	NA	A0A2D1GR59	Pseudomonas_phage	45.2	5.2e-13
WP_080939596.1|1405524_1406829_-	DUF1073 domain-containing protein	NA	H9C106	Vibrio_phage	37.1	2.6e-67
WP_046419640.1|1406909_1408460_-|terminase	phage terminase large subunit	terminase	H9C0C7	Vibrio_phage	44.7	5.4e-112
WP_046419638.1|1408410_1408809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046420065.1|1408900_1409131_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419636.1|1409114_1409576_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419634.1|1409565_1409895_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023907472.1|1409887_1410385_-	lysozyme	NA	A0A2I7RLY1	Vibrio_phage	53.1	2.3e-27
WP_004085696.1|1410589_1410928_-	BrnA antitoxin family protein	NA	K4NZP3	Burkholderia_phage	54.9	1.0e-07
WP_010894061.1|1410914_1411181_-	hypothetical protein	NA	K4NX81	Burkholderia_phage	40.7	8.1e-08
WP_046419632.1|1411368_1412067_-	hypothetical protein	NA	C8CLH7	Xylella_phage	81.7	4.3e-101
WP_046419893.1|1412195_1412606_-	hypothetical protein	NA	A0A088F6Y8	Sulfitobacter_phage	42.1	3.2e-11
WP_046419631.1|1412653_1413343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_104993183.1|1413323_1414316_-	DUF1376 domain-containing protein	NA	A0A0P0I481	Acinetobacter_phage	44.3	2.9e-18
1414286:1414299	attL	AATCGCCAATGTGG	NA	NA	NA	NA
WP_080939588.1|1414689_1415010_+	DUF4224 domain-containing protein	NA	C8CLF5	Xylella_phage	80.3	1.4e-27
WP_046419629.1|1415009_1416029_+|integrase	tyrosine-type recombinase/integrase	integrase	C8CLF4	Xylella_phage	90.3	1.2e-173
WP_046419886.1|1416173_1417583_-	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_155641460.1|1417687_1417828_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419626.1|1418147_1419515_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	47.1	1.3e-109
1418696:1418709	attR	AATCGCCAATGTGG	NA	NA	NA	NA
