assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002892575.1_ASM289257v1	NZ_CP025930	Porphyromonas gingivalis ATCC 33277 chromosome, complete genome	1	110920-111019	1	CRISPRCasFinder	no		PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	Orphan	GGTTTCTAAGGCTCTATATCTTTTGACGTTGTT	33	1	1	110953-110986	NZ_CP025930.1_1735782-1735749	NA	1	1	Orphan	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	NA|73aa|up_7|NZ_CP025930.1_105518_105737_-,NA|70aa|up_6|NZ_CP025930.1_105749_105959_-,NA|41aa|up_5|NZ_CP025930.1_106129_106252_-,NA|62aa|down_2|NZ_CP025930.1_116466_116652_-,NA|49aa|down_3|NZ_CP025930.1_116701_116848_-	NA|177aa|up_9|NZ_CP025930.1_104537_105068_-	pfam07275, ArdA, Antirestriction protein (ArdA)	NA|139aa|up_8|NZ_CP025930.1_105089_105506_-	pfam14058, PcfK, PcfK-like protein	NA|73aa|up_7|NZ_CP025930.1_105518_105737_-	NA	NA|70aa|up_6|NZ_CP025930.1_105749_105959_-	NA	NA|41aa|up_5|NZ_CP025930.1_106129_106252_-	NA	NA|383aa|up_4|NZ_CP025930.1_106596_107745_+	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase	NA|296aa|up_3|NZ_CP025930.1_107734_108622_+	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|127aa|up_2|NZ_CP025930.1_108713_109094_+	pfam03965, Penicillinase_R, Penicillinase repressor	NA|439aa|up_1|NZ_CP025930.1_109128_110445_+	cd07341, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|62aa|up_0|NZ_CP025930.1_110489_110675_-	pfam07877, DUF1661, Protein of unknown function (DUF1661)	NA|362aa|down_0|NZ_CP025930.1_111345_112431_-	pfam05598, DUF772, Transposase domain (DUF772)	NA|84aa|down_1|NZ_CP025930.1_112545_112797_+	pfam07863, CtnDOT_TraJ, homologs of TraJ from Bacteroides conjugative transposon	NA|62aa|down_2|NZ_CP025930.1_116466_116652_-	NA	NA|49aa|down_3|NZ_CP025930.1_116701_116848_-	NA	NA|452aa|down_4|NZ_CP025930.1_117166_118522_+	TIGR01936, Na+-translocating_NADH-quinone_reductase_subunit_A, NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit	NA|400aa|down_5|NZ_CP025930.1_118552_119752_+	TIGR01937, Na+-translocating_NADH-quinone_reductase_subunit_B, NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit	NA|245aa|down_6|NZ_CP025930.1_119775_120510_+	TIGR01938, Na+-translocating_NADH-quinone_reductase_subunit_C, NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit	NA|210aa|down_7|NZ_CP025930.1_120515_121145_+	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated	NA|205aa|down_8|NZ_CP025930.1_121184_121799_+	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional	NA|413aa|down_9|NZ_CP025930.1_121817_123056_+	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional
GCF_002892575.1_ASM289257v1	NZ_CP025930	Porphyromonas gingivalis ATCC 33277 chromosome, complete genome	2	356543-356675	2	CRISPRCasFinder	no	DEDDh	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	Unclear	GGGGTTATACTATAAAGGGTAGAGACTTTTAAGTATAAAGT	41	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	NA|25aa|up_8|NZ_CP025930.1_349533_349608_+,NA|163aa|up_6|NZ_CP025930.1_350337_350826_+,NA|298aa|up_4|NZ_CP025930.1_351367_352261_+,NA|286aa|up_3|NZ_CP025930.1_352274_353132_+,NA|122aa|up_1|NZ_CP025930.1_354678_355044_-,NA|66aa|down_6|NZ_CP025930.1_363856_364054_+	NA|36aa|up_9|NZ_CP025930.1_349439_349547_-	pfam07877, DUF1661, Protein of unknown function (DUF1661)	NA|25aa|up_8|NZ_CP025930.1_349533_349608_+	NA	NA|167aa|up_7|NZ_CP025930.1_349840_350341_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|163aa|up_6|NZ_CP025930.1_350337_350826_+	NA	NA|151aa|up_5|NZ_CP025930.1_350881_351334_+	pfam14060, DUF4252, Domain of unknown function (DUF4252)	NA|298aa|up_4|NZ_CP025930.1_351367_352261_+	NA	NA|286aa|up_3|NZ_CP025930.1_352274_353132_+	NA	NA|362aa|up_2|NZ_CP025930.1_353424_354510_-	pfam05598, DUF772, Transposase domain (DUF772)	NA|122aa|up_1|NZ_CP025930.1_354678_355044_-	NA	NA|156aa|up_0|NZ_CP025930.1_355910_356378_-	TIGR01201, HU_rel, DNA-binding protein, histone-like, putative	DEDDh|164aa|down_0|NZ_CP025930.1_357178_357670_-	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|213aa|down_1|NZ_CP025930.1_357673_358312_-	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion]	NA|898aa|down_2|NZ_CP025930.1_358492_361186_-	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|462aa|down_3|NZ_CP025930.1_361247_362633_-	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|309aa|down_4|NZ_CP025930.1_362678_363605_-	COG1834, COG1834, N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism]	NA|50aa|down_5|NZ_CP025930.1_363738_363888_-	pfam07877, DUF1661, Protein of unknown function (DUF1661)	NA|66aa|down_6|NZ_CP025930.1_363856_364054_+	NA	NA|221aa|down_7|NZ_CP025930.1_364083_364746_+	PRK01362, PRK01362, fructose-6-phosphate aldolase	NA|433aa|down_8|NZ_CP025930.1_364742_366041_+	pfam07075, DUF1343, Protein of unknown function (DUF1343)	NA|822aa|down_9|NZ_CP025930.1_366119_368585_-	cd18173, M14_CP_bacteria, bacterial peptidase M14 carboxypeptidase, uncharacterized
GCF_002892575.1_ASM289257v1	NZ_CP025930	Porphyromonas gingivalis ATCC 33277 chromosome, complete genome	3	781004-781111	3	CRISPRCasFinder	no		PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	Orphan	GAAGCGATTTCGGCGAAAAAATTCCT	26	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	NA,NA	NA|357aa|up_9|NZ_CP025930.1_770474_771545_+	pfam01032, FecCD, FecCD transport family	NA|253aa|up_8|NZ_CP025930.1_771588_772347_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|198aa|up_7|NZ_CP025930.1_772738_773332_-	PRK06853, PRK06853, indolepyruvate oxidoreductase subunit beta; Reviewed	NA|536aa|up_6|NZ_CP025930.1_773358_774966_-	TIGR03336, IOR_alpha, indolepyruvate ferredoxin oxidoreductase, alpha subunit	NA|254aa|up_5|NZ_CP025930.1_775043_775805_-	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|43aa|up_4|NZ_CP025930.1_775905_776034_-	pfam07877, DUF1661, Protein of unknown function (DUF1661)	NA|398aa|up_3|NZ_CP025930.1_776232_777426_+	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|171aa|up_2|NZ_CP025930.1_777462_777975_+	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase)	NA|445aa|up_1|NZ_CP025930.1_778177_779512_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|418aa|up_0|NZ_CP025930.1_779551_780805_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|784aa|down_0|NZ_CP025930.1_781454_783806_+	TIGR03434, ADOP, Acidobacterial duplicated orphan permease	NA|790aa|down_1|NZ_CP025930.1_783844_786214_+	TIGR03434, ADOP, Acidobacterial duplicated orphan permease	NA|792aa|down_2|NZ_CP025930.1_786240_788616_+	TIGR03434, ADOP, Acidobacterial duplicated orphan permease	NA|220aa|down_3|NZ_CP025930.1_788708_789368_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|518aa|down_4|NZ_CP025930.1_789673_791227_-	COG2461, COG2461, Uncharacterized conserved protein [Function unknown]	NA|56aa|down_5|NZ_CP025930.1_791346_791514_-	pfam07877, DUF1661, Protein of unknown function (DUF1661)	NA|452aa|down_6|NZ_CP025930.1_791710_793066_-	cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like	NA|372aa|down_7|NZ_CP025930.1_793261_794377_-	cd14860, 4HBD_NAD, 4-hydroxybutyrate dehydrogenase, also called gamma-hydroxybutyrate dehydrogenase, catalyzes the reduction of succinic simialdehyde to 4-hydroxybutyrate in the succinic degradation pathway	NA|432aa|down_8|NZ_CP025930.1_794427_795723_-	COG0427, ACH1, Acetyl-CoA hydrolase [Energy production and conversion]	NA|95aa|down_9|NZ_CP025930.1_795728_796013_-	pfam01106, NifU, NifU-like domain
GCF_002892575.1_ASM289257v1	NZ_CP025930	Porphyromonas gingivalis ATCC 33277 chromosome, complete genome	4	902669-902763	4	CRISPRCasFinder	no		PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	Orphan	TTTTTCATTGAAATACCGTTAGTCGATAGG	30	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	NA,NA|62aa|down_1|NZ_CP025930.1_906745_906931_+	NA|81aa|up_9|NZ_CP025930.1_890753_890996_+	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain	NA|873aa|up_8|NZ_CP025930.1_891071_893690_-	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain	NA|239aa|up_7|NZ_CP025930.1_893730_894447_-	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|395aa|up_6|NZ_CP025930.1_894427_895612_-	PRK12298, obgE, GTPase CgtA; Reviewed	NA|195aa|up_5|NZ_CP025930.1_895621_896206_-	PRK00279, adk, adenylate kinase; Reviewed	NA|179aa|up_4|NZ_CP025930.1_896206_896743_-	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|47aa|up_3|NZ_CP025930.1_896951_897092_+	pfam07877, DUF1661, Protein of unknown function (DUF1661)	NA|666aa|up_2|NZ_CP025930.1_897336_899334_+	pfam06874, FBPase_2, Firmicute fructose-1,6-bisphosphatase	NA|785aa|up_1|NZ_CP025930.1_899489_901844_+	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane]	NA|237aa|up_0|NZ_CP025930.1_901891_902602_+	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|926aa|down_0|NZ_CP025930.1_902766_905544_-	PLN02563, PLN02563, aminoacyl-tRNA ligase	NA|62aa|down_1|NZ_CP025930.1_906745_906931_+	NA	NA|520aa|down_2|NZ_CP025930.1_907080_908640_-	COG2509, COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only]	NA|484aa|down_3|NZ_CP025930.1_908624_910076_-	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase	NA|91aa|down_4|NZ_CP025930.1_910208_910481_-	pfam07863, CtnDOT_TraJ, homologs of TraJ from Bacteroides conjugative transposon	NA|450aa|down_5|NZ_CP025930.1_910715_912065_-	COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]	NA|264aa|down_6|NZ_CP025930.1_912069_912861_-	PRK00443, nagB, glucosamine-6-phosphate deaminase; Provisional	NA|403aa|down_7|NZ_CP025930.1_912898_914107_-	COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion]	NA|284aa|down_8|NZ_CP025930.1_914140_914992_-	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed	NA|302aa|down_9|NZ_CP025930.1_915028_915934_-	TIGR01921, Meso-diaminopimelate_D-dehydrogenase, diaminopimelate dehydrogenase
GCF_002892575.1_ASM289257v1	NZ_CP025930	Porphyromonas gingivalis ATCC 33277 chromosome, complete genome	5	1410859-1411687	1,5,1	PILER-CR,CRISPRCasFinder,CRT	no	cas13b,Csx27	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	Type VI-B1,Type VI-B2	GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC,GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC,GTTGTCTCCACCCTTCTAACTAAGGGTATTCCCAAC	36,36,36	0	0	NA	NA	VI-B1:VI-B1:VI-B1	12,12,12	12	TypeVI-B1,TypeVI-B2	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	NA|139aa|up_9|NZ_CP025930.1_1401687_1402104_+,NA|49aa|up_5|NZ_CP025930.1_1404791_1404938_+,Csx27|239aa|down_1|NZ_CP025930.1_1415098_1415815_-	NA|139aa|up_9|NZ_CP025930.1_1401687_1402104_+	NA	NA|202aa|up_8|NZ_CP025930.1_1402264_1402870_+	pfam14063, DUF4254, Protein of unknown function (DUF4254)	NA|352aa|up_7|NZ_CP025930.1_1402953_1404009_+	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins	NA|151aa|up_6|NZ_CP025930.1_1403992_1404445_+	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|49aa|up_5|NZ_CP025930.1_1404791_1404938_+	NA	NA|341aa|up_4|NZ_CP025930.1_1405200_1406223_-	pfam03186, CobD_Cbib, CobD/Cbib protein	NA|336aa|up_3|NZ_CP025930.1_1406236_1407244_-	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase	NA|499aa|up_2|NZ_CP025930.1_1407236_1408733_-	PRK00784, PRK00784, cobyric acid synthase	NA|189aa|up_1|NZ_CP025930.1_1408729_1409296_-	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase	NA|440aa|up_0|NZ_CP025930.1_1409318_1410638_-	PRK01077, PRK01077, cobyrinate a,c-diamide synthase	cas13b|1136aa|down_0|NZ_CP025930.1_1411694_1415102_-	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins	Csx27|239aa|down_1|NZ_CP025930.1_1415098_1415815_-	NA	NA|291aa|down_2|NZ_CP025930.1_1416803_1417676_+	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|247aa|down_3|NZ_CP025930.1_1417996_1418737_+	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|456aa|down_4|NZ_CP025930.1_1418733_1420101_+	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion]	NA|195aa|down_5|NZ_CP025930.1_1420106_1420691_+	COG1556, COG1556, Uncharacterized conserved protein [Function unknown]	NA|158aa|down_6|NZ_CP025930.1_1420801_1421275_-	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|412aa|down_7|NZ_CP025930.1_1421878_1423114_+	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain	NA|122aa|down_8|NZ_CP025930.1_1423128_1423494_+	COG3943, COG3943, Virulence protein [General function prediction only]	NA|101aa|down_9|NZ_CP025930.1_1423543_1423846_-	pfam12728, HTH_17, Helix-turn-helix domain
GCF_002892575.1_ASM289257v1	NZ_CP025930	Porphyromonas gingivalis ATCC 33277 chromosome, complete genome	6	1575467-1575561	6	CRISPRCasFinder	no		PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	Orphan	CTTTCAAATAGAGAATGATACATAACTAAC	30	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	NA|89aa|up_6|NZ_CP025930.1_1566687_1566954_+,NA|72aa|down_7|NZ_CP025930.1_1592250_1592466_+	NA|354aa|up_9|NZ_CP025930.1_1563844_1564906_+	TIGR01357, 3-dehydroquinate_synthase, 3-dehydroquinate synthase	NA|244aa|up_8|NZ_CP025930.1_1565150_1565882_-	pfam08713, DNA_alkylation, DNA alkylation repair enzyme	NA|254aa|up_7|NZ_CP025930.1_1565896_1566658_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|89aa|up_6|NZ_CP025930.1_1566687_1566954_+	NA	NA|412aa|up_5|NZ_CP025930.1_1567734_1568970_-	TIGR02212, releasing_system_transmembrane_protein_lolC	NA|670aa|up_4|NZ_CP025930.1_1568982_1570992_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|176aa|up_3|NZ_CP025930.1_1570979_1571507_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|208aa|up_2|NZ_CP025930.1_1571513_1572137_-	PRK00076, recR, recombination protein RecR; Reviewed	NA|520aa|up_1|NZ_CP025930.1_1572133_1573693_-	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family	NA|93aa|up_0|NZ_CP025930.1_1573968_1574247_-	cd13836, IHF_B, Beta subunit of integration host factor (IHFB)	NA|164aa|down_0|NZ_CP025930.1_1575640_1576132_-	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein	NA|799aa|down_1|NZ_CP025930.1_1576164_1578561_-	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|362aa|down_2|NZ_CP025930.1_1579489_1580575_+	pfam05598, DUF772, Transposase domain (DUF772)	NA|544aa|down_3|NZ_CP025930.1_1587063_1588695_-	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17	NA|310aa|down_4|NZ_CP025930.1_1588771_1589701_-	COG4874, COG4874, Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown]	NA|410aa|down_5|NZ_CP025930.1_1589707_1590937_-	TIGR01885, Ornithine_aminotransferase, ornithine aminotransferase	NA|189aa|down_6|NZ_CP025930.1_1591386_1591953_+	PRK00529, PRK00529, elongation factor P; Validated	NA|72aa|down_7|NZ_CP025930.1_1592250_1592466_+	NA	NA|169aa|down_8|NZ_CP025930.1_1592488_1592995_+	TIGR01201, HU_rel, DNA-binding protein, histone-like, putative	NA|559aa|down_9|NZ_CP025930.1_1593136_1594813_-	PRK03818, PRK03818, putative transporter; Validated
GCF_002892575.1_ASM289257v1	NZ_CP025930	Porphyromonas gingivalis ATCC 33277 chromosome, complete genome	7	1839116-1839415	2,7,2	PILER-CR,CRISPRCasFinder,CRT	no	Csx28,cas13b	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	Type VI-B2,Type VI-B1	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC,GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC,GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	36,36,36	0	0	NA	NA	VI-B2:VI-B2:VI-B2	4,4,4	4	TypeVI-B2,TypeVI-B1	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	NA|87aa|up_9|NZ_CP025930.1_1827051_1827312_-,NA|198aa|up_3|NZ_CP025930.1_1833530_1834124_+,Csx28|182aa|down_0|NZ_CP025930.1_1839624_1840170_-,NA|190aa|down_2|NZ_CP025930.1_1843821_1844391_+,NA|332aa|down_9|NZ_CP025930.1_1852304_1853300_+	NA|87aa|up_9|NZ_CP025930.1_1827051_1827312_-	NA	NA|486aa|up_8|NZ_CP025930.1_1827325_1828783_+	NF033187, internalin_J, class 1 internalin InlJ	NA|257aa|up_7|NZ_CP025930.1_1828877_1829648_-	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]	NA|699aa|up_6|NZ_CP025930.1_1829647_1831744_-	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|343aa|up_5|NZ_CP025930.1_1831786_1832815_-	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs	NA|202aa|up_4|NZ_CP025930.1_1832824_1833430_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|198aa|up_3|NZ_CP025930.1_1833530_1834124_+	NA	NA|490aa|up_2|NZ_CP025930.1_1834126_1835596_+	cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain	NA|400aa|up_1|NZ_CP025930.1_1835758_1836958_+	PRK06234, PRK06234, methionine gamma-lyase; Provisional	NA|362aa|up_0|NZ_CP025930.1_1837298_1838384_-	pfam05598, DUF772, Transposase domain (DUF772)	Csx28|182aa|down_0|NZ_CP025930.1_1839624_1840170_-	NA	cas13b|1120aa|down_1|NZ_CP025930.1_1840174_1843534_-	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins	NA|190aa|down_2|NZ_CP025930.1_1843821_1844391_+	NA	NA|301aa|down_3|NZ_CP025930.1_1844410_1845313_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|505aa|down_4|NZ_CP025930.1_1845452_1846967_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|320aa|down_5|NZ_CP025930.1_1846994_1847954_+	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|303aa|down_6|NZ_CP025930.1_1847964_1848873_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|659aa|down_7|NZ_CP025930.1_1849100_1851077_-	PRK09376, rho, transcription termination factor Rho; Provisional	NA|173aa|down_8|NZ_CP025930.1_1851753_1852272_+	TIGR01201, HU_rel, DNA-binding protein, histone-like, putative	NA|332aa|down_9|NZ_CP025930.1_1852304_1853300_+	NA
GCF_002892575.1_ASM289257v1	NZ_CP025930	Porphyromonas gingivalis ATCC 33277 chromosome, complete genome	8	1985121-1985214	8	CRISPRCasFinder	no		PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	Orphan	AACAACGTCCCAACATGGTTATATTCTGGG	30	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	NA,NA|60aa|down_7|NZ_CP025930.1_1993768_1993948_+	NA|272aa|up_9|NZ_CP025930.1_1973720_1974536_-	pfam08323, Glyco_transf_5, Starch synthase catalytic domain	NA|81aa|up_8|NZ_CP025930.1_1974874_1975117_+	pfam07877, DUF1661, Protein of unknown function (DUF1661)	NA|708aa|up_7|NZ_CP025930.1_1975162_1977286_+	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|558aa|up_6|NZ_CP025930.1_1977760_1979434_+	cd05914, LC_FACL_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	NA|71aa|up_5|NZ_CP025930.1_1979605_1979818_+	pfam16386, DUF4995, Domain of unknown function	NA|168aa|up_4|NZ_CP025930.1_1980036_1980540_-	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|140aa|up_3|NZ_CP025930.1_1980676_1981096_+	COG3339, COG3339, Uncharacterized conserved protein [Function unknown]	NA|426aa|up_2|NZ_CP025930.1_1981311_1982589_+	PRK00077, eno, enolase; Provisional	NA|205aa|up_1|NZ_CP025930.1_1982713_1983328_-	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain	NA|204aa|up_0|NZ_CP025930.1_1984204_1984816_+	TIGR03153, cytochr_NrfH, cytochrome c nitrite reductase, small subunit	NA|432aa|down_0|NZ_CP025930.1_1986468_1987764_+	pfam05140, ResB, ResB-like family	NA|272aa|down_1|NZ_CP025930.1_1987756_1988572_+	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|174aa|down_2|NZ_CP025930.1_1988840_1989362_+	pfam02525, Flavodoxin_2, Flavodoxin-like fold	NA|255aa|down_3|NZ_CP025930.1_1989358_1990123_+	PRK05450, PRK05450, 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional	NA|674aa|down_4|NZ_CP025930.1_1990166_1992188_+	TIGR01391, DNA_primase, DNA primase, catalytic core	NA|76aa|down_5|NZ_CP025930.1_1992419_1992647_+	PRK09626, oorD, 2-oxoglutarate-acceptor oxidoreductase subunit OorD; Reviewed	NA|361aa|down_6|NZ_CP025930.1_1992665_1993748_+	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated	NA|60aa|down_7|NZ_CP025930.1_1993768_1993948_+	NA	NA|255aa|down_8|NZ_CP025930.1_1993964_1994729_+	cd03375, TPP_OGFOR, Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor	NA|182aa|down_9|NZ_CP025930.1_1994757_1995303_+	pfam01558, POR, Pyruvate ferredoxin/flavodoxin oxidoreductase
GCF_002892575.1_ASM289257v1	NZ_CP025930	Porphyromonas gingivalis ATCC 33277 chromosome, complete genome	9	2155417-2155525	9	CRISPRCasFinder	no	cas2	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	Unclear	GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG	37	0	0	NA	NA	NA	1	1	Unclear	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	NA|89aa|up_9|NZ_CP025930.1_2143451_2143718_-,NA|351aa|up_6|NZ_CP025930.1_2147765_2148818_+,NA|223aa|up_5|NZ_CP025930.1_2148961_2149630_-,NA|364aa|up_4|NZ_CP025930.1_2149608_2150700_-,NA|351aa|up_3|NZ_CP025930.1_2150912_2151965_+,NA|82aa|down_2|NZ_CP025930.1_2158477_2158723_+,NA|426aa|down_7|NZ_CP025930.1_2165068_2166346_-	NA|89aa|up_9|NZ_CP025930.1_2143451_2143718_-	NA	NA|362aa|up_8|NZ_CP025930.1_2144440_2145526_-	pfam05598, DUF772, Transposase domain (DUF772)	NA|280aa|up_7|NZ_CP025930.1_2146362_2147202_-	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam)	NA|351aa|up_6|NZ_CP025930.1_2147765_2148818_+	NA	NA|223aa|up_5|NZ_CP025930.1_2148961_2149630_-	NA	NA|364aa|up_4|NZ_CP025930.1_2149608_2150700_-	NA	NA|351aa|up_3|NZ_CP025930.1_2150912_2151965_+	NA	NA|669aa|up_2|NZ_CP025930.1_2152331_2154338_-	pfam12836, HHH_3, Helix-hairpin-helix motif	NA|57aa|up_1|NZ_CP025930.1_2154903_2155074_-	pfam07877, DUF1661, Protein of unknown function (DUF1661)	NA|36aa|up_0|NZ_CP025930.1_2155042_2155150_+	pfam07877, DUF1661, Protein of unknown function (DUF1661)	NA|301aa|down_0|NZ_CP025930.1_2155702_2156605_+	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|301aa|down_1|NZ_CP025930.1_2157541_2158444_-	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|82aa|down_2|NZ_CP025930.1_2158477_2158723_+	NA	NA|570aa|down_3|NZ_CP025930.1_2159030_2160740_-	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|118aa|down_4|NZ_CP025930.1_2161013_2161367_+	pfam07863, CtnDOT_TraJ, homologs of TraJ from Bacteroides conjugative transposon	NA|569aa|down_5|NZ_CP025930.1_2161536_2163243_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|585aa|down_6|NZ_CP025930.1_2163289_2165044_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|426aa|down_7|NZ_CP025930.1_2165068_2166346_-	NA	NA|255aa|down_8|NZ_CP025930.1_2166349_2167114_-	cd16329, LolA_like, proteins similar to periplasmic molecular chaperone LolA, the outer membrane lipoprotein receptor LolB and the periplasmic protein RseB	NA|802aa|down_9|NZ_CP025930.1_2167218_2169624_-	COG1033, COG1033, Predicted exporters of the RND superfamily [General function prediction only]
GCF_002892575.1_ASM289257v1	NZ_CP025930	Porphyromonas gingivalis ATCC 33277 chromosome, complete genome	10	2204849-2204942	10	CRISPRCasFinder	no	cas2,cas1,cas4,cas7,cas8b6,cas3,cas5,cas6	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	Unclear	AGTTCTTCGCATAAAAGGAGCGAGTGAAAG	30	0	0	NA	NA	NA	1	1	Unclear	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	NA|120aa|up_2|NZ_CP025930.1_2199316_2199676_+,cas8b6|432aa|down_5|NZ_CP025930.1_2217579_2218875_-,cas5|196aa|down_7|NZ_CP025930.1_2221022_2221610_-	NA|325aa|up_9|NZ_CP025930.1_2191831_2192806_-	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|213aa|up_8|NZ_CP025930.1_2192863_2193502_-	pfam08889, WbqC, WbqC-like protein family	NA|209aa|up_7|NZ_CP025930.1_2193522_2194149_-	TIGR02227, Inactive_signal_peptidase_IA	NA|466aa|up_6|NZ_CP025930.1_2194138_2195536_-	PRK10861, PRK10861, signal peptidase I	NA|239aa|up_5|NZ_CP025930.1_2195551_2196268_-	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|445aa|up_4|NZ_CP025930.1_2196328_2197663_-	TIGR01353, dGTP_triPase, deoxyguanosinetriphosphate triphosphohydrolase, putative	NA|331aa|up_3|NZ_CP025930.1_2197815_2198808_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|120aa|up_2|NZ_CP025930.1_2199316_2199676_+	NA	NA|246aa|up_1|NZ_CP025930.1_2202144_2202882_+	pfam02565, RecO_C, Recombination protein O C terminal	NA|583aa|up_0|NZ_CP025930.1_2202954_2204703_+	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|350aa|down_0|NZ_CP025930.1_2205308_2206358_-	pfam05598, DUF772, Transposase domain (DUF772)	cas2|88aa|down_1|NZ_CP025930.1_2214597_2214861_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|339aa|down_2|NZ_CP025930.1_2214860_2215877_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|170aa|down_3|NZ_CP025930.1_2215873_2216383_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas7|353aa|down_4|NZ_CP025930.1_2216500_2217559_-	TIGR01875, CRISPR-associated_protein_Cas7/Cst2/DevR, CRISPR-associated autoregulator DevR family	cas8b6|432aa|down_5|NZ_CP025930.1_2217579_2218875_-	NA	cas3|707aa|down_6|NZ_CP025930.1_2218885_2221006_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|196aa|down_7|NZ_CP025930.1_2221022_2221610_-	NA	cas6|222aa|down_8|NZ_CP025930.1_2221616_2222282_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|66aa|down_9|NZ_CP025930.1_2222356_2222554_-	pfam07877, DUF1661, Protein of unknown function (DUF1661)
GCF_002892575.1_ASM289257v1	NZ_CP025930	Porphyromonas gingivalis ATCC 33277 chromosome, complete genome	11	2206472-2214351	11,3,3	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8b6,cas3,cas5,cas6	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	Unclear	GTTTTAATTCCTGTATGGTGCAATTGAAAT,GTTTTAATTCCTGTATGGTGCAATTGAAAT,GTTTTAATTCCTGTATGGTGCAATTGAAAT	30,30,30	0	0	NA	NA	NA:NA:NA	119,119,115	119	Unclear	PD-DExK,DEDDh,cas13b,Csx27,Csx28,cas3,cas2,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,cas1,cas4,cas7,cas8b6,cas5,cas6	NA|120aa|up_3|NZ_CP025930.1_2199316_2199676_+,cas8b6|432aa|down_4|NZ_CP025930.1_2217579_2218875_-,cas5|196aa|down_6|NZ_CP025930.1_2221022_2221610_-,NA|31aa|down_9|NZ_CP025930.1_2222522_2222615_+	NA|213aa|up_9|NZ_CP025930.1_2192863_2193502_-	pfam08889, WbqC, WbqC-like protein family	NA|209aa|up_8|NZ_CP025930.1_2193522_2194149_-	TIGR02227, Inactive_signal_peptidase_IA	NA|466aa|up_7|NZ_CP025930.1_2194138_2195536_-	PRK10861, PRK10861, signal peptidase I	NA|239aa|up_6|NZ_CP025930.1_2195551_2196268_-	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|445aa|up_5|NZ_CP025930.1_2196328_2197663_-	TIGR01353, dGTP_triPase, deoxyguanosinetriphosphate triphosphohydrolase, putative	NA|331aa|up_4|NZ_CP025930.1_2197815_2198808_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|120aa|up_3|NZ_CP025930.1_2199316_2199676_+	NA	NA|246aa|up_2|NZ_CP025930.1_2202144_2202882_+	pfam02565, RecO_C, Recombination protein O C terminal	NA|583aa|up_1|NZ_CP025930.1_2202954_2204703_+	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|350aa|up_0|NZ_CP025930.1_2205308_2206358_-	pfam05598, DUF772, Transposase domain (DUF772)	cas2|88aa|down_0|NZ_CP025930.1_2214597_2214861_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|339aa|down_1|NZ_CP025930.1_2214860_2215877_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|170aa|down_2|NZ_CP025930.1_2215873_2216383_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas7|353aa|down_3|NZ_CP025930.1_2216500_2217559_-	TIGR01875, CRISPR-associated_protein_Cas7/Cst2/DevR, CRISPR-associated autoregulator DevR family	cas8b6|432aa|down_4|NZ_CP025930.1_2217579_2218875_-	NA	cas3|707aa|down_5|NZ_CP025930.1_2218885_2221006_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|196aa|down_6|NZ_CP025930.1_2221022_2221610_-	NA	cas6|222aa|down_7|NZ_CP025930.1_2221616_2222282_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|66aa|down_8|NZ_CP025930.1_2222356_2222554_-	pfam07877, DUF1661, Protein of unknown function (DUF1661)	NA|31aa|down_9|NZ_CP025930.1_2222522_2222615_+	NA
