assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002886865.1_ASM288686v1	NZ_CP025607	Mycobacterium tuberculosis strain GG-186-10 chromosome, complete genome	1	333636-334434	1	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGGNGCCGCCGGNN	18	0	0	NA	NA	NA	15	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP025607.1_333151_333334_-,NA	NA|398aa|up_9|NZ_CP025607.1_323329_324523_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP025607.1_324558_326241_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP025607.1_326257_328453_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP025607.1_328566_329700_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP025607.1_329696_330317_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP025607.1_330413_330995_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP025607.1_330924_331650_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP025607.1_331739_332660_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP025607.1_332699_333128_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP025607.1_333151_333334_-	NA	NA|537aa|down_0|NZ_CP025607.1_339354_340965_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_1|NZ_CP025607.1_340988_341897_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_2|NZ_CP025607.1_342120_344016_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_3|NZ_CP025607.1_344012_345629_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_4|NZ_CP025607.1_345625_349618_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_5|NZ_CP025607.1_349614_349923_+	pfam00934, PE, PE family	NA|514aa|down_6|NZ_CP025607.1_349925_351467_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_7|NZ_CP025607.1_351515_351809_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_8|NZ_CP025607.1_351838_352129_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|296aa|down_9|NZ_CP025607.1_352139_353027_+	pfam14011, ESX-1_EspG, EspG family
GCF_002886865.1_ASM288686v1	NZ_CP025607	Mycobacterium tuberculosis strain GG-186-10 chromosome, complete genome	2	338095-338317	1	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	ATCCGCCGCTACCGCCGGTGCCGCCGGCGCCGAACAGCCCGCC	43	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_1|NZ_CP025607.1_333151_333334_-,NA	NA|561aa|up_9|NZ_CP025607.1_324558_326241_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_8|NZ_CP025607.1_326257_328453_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_7|NZ_CP025607.1_328566_329700_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_6|NZ_CP025607.1_329696_330317_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_5|NZ_CP025607.1_330413_330995_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_4|NZ_CP025607.1_330924_331650_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_3|NZ_CP025607.1_331739_332660_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_2|NZ_CP025607.1_332699_333128_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_1|NZ_CP025607.1_333151_333334_-	NA	NA|615aa|up_0|NZ_CP025607.1_333428_335273_-	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional	NA|537aa|down_0|NZ_CP025607.1_339354_340965_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_1|NZ_CP025607.1_340988_341897_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_2|NZ_CP025607.1_342120_344016_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_3|NZ_CP025607.1_344012_345629_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_4|NZ_CP025607.1_345625_349618_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_5|NZ_CP025607.1_349614_349923_+	pfam00934, PE, PE family	NA|514aa|down_6|NZ_CP025607.1_349925_351467_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_7|NZ_CP025607.1_351515_351809_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_8|NZ_CP025607.1_351838_352129_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|296aa|down_9|NZ_CP025607.1_352139_353027_+	pfam14011, ESX-1_EspG, EspG family
GCF_002886865.1_ASM288686v1	NZ_CP025607	Mycobacterium tuberculosis strain GG-186-10 chromosome, complete genome	3	366454-367152	1	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	366742-366783|366817-366849	NZ_CP025607.1_374757-374798|NZ_CP025607.1_373572-373604	NA	10	10	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP025607.1_363466_363769_+,NA|161aa|down_1|NZ_CP025607.1_376546_377029_-,NA|410aa|down_5|NZ_CP025607.1_379145_380375_+	NA|262aa|up_9|NZ_CP025607.1_358161_358947_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP025607.1_358935_359739_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP025607.1_359748_361146_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP025607.1_361324_363100_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP025607.1_363242_363470_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP025607.1_363466_363769_+	NA	NA|74aa|up_3|NZ_CP025607.1_363816_364038_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP025607.1_364034_364460_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP025607.1_364595_365228_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP025607.1_365224_366133_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP025607.1_375887_376559_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP025607.1_376546_377029_-	NA	NA|239aa|down_2|NZ_CP025607.1_377086_377803_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP025607.1_377904_378561_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP025607.1_378630_379122_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP025607.1_379145_380375_+	NA	NA|621aa|down_6|NZ_CP025607.1_380529_382392_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP025607.1_382463_382850_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|221aa|down_8|NZ_CP025607.1_382852_383515_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP025607.1_383575_384460_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_002886865.1_ASM288686v1	NZ_CP025607	Mycobacterium tuberculosis strain GG-186-10 chromosome, complete genome	4	691984-692060	2	CRISPRCasFinder	no	c2c9_V-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type V-U4	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	TypeV-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|136aa|up_9|NZ_CP025607.1_677879_678287_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_8|NZ_CP025607.1_678346_679033_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_7|NZ_CP025607.1_679186_681820_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_6|NZ_CP025607.1_681842_684230_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_5|NZ_CP025607.1_684367_685090_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_4|NZ_CP025607.1_685086_685884_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_3|NZ_CP025607.1_685885_686773_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_2|NZ_CP025607.1_686778_687993_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_1|NZ_CP025607.1_689016_690462_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|479aa|up_0|NZ_CP025607.1_690458_691895_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP025607.1_693195_694746_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP025607.1_694797_695190_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP025607.1_695186_695444_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP025607.1_695626_696862_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP025607.1_697112_697526_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP025607.1_697522_697759_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP025607.1_697862_698369_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP025607.1_698482_698953_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP025607.1_698996_699758_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP025607.1_699814_700126_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_002886865.1_ASM288686v1	NZ_CP025607	Mycobacterium tuberculosis strain GG-186-10 chromosome, complete genome	5	926580-927527	2	CRT	no	csa3	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGGGCCGGCGGNNCCGGCGG	21	1	3	927363-927398|927363-927398|927363-927398	NZ_CP025607.1_675081-675046|NZ_CP025607.1_1213724-1213759|NZ_CP025607.1_2423780-2423745	NA	19	19	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_2|NZ_CP025607.1_931528_932080_-,NA|81aa|down_8|NZ_CP025607.1_937543_937786_+	NA|685aa|up_9|NZ_CP025607.1_914216_916271_-	TIGR00350, Transcriptional_regulator_LytR, cell envelope-related function transcriptional attenuator common domain	NA|390aa|up_8|NZ_CP025607.1_916436_917606_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_7|NZ_CP025607.1_917693_918710_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_6|NZ_CP025607.1_918871_919513_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_5|NZ_CP025607.1_919593_920649_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_4|NZ_CP025607.1_920700_921093_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_3|NZ_CP025607.1_921150_921573_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|97aa|up_2|NZ_CP025607.1_921534_921825_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|up_1|NZ_CP025607.1_921929_922835_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_0|NZ_CP025607.1_922853_923669_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|880aa|down_0|NZ_CP025607.1_927796_930436_-	pfam00934, PE, PE family	NA|215aa|down_1|NZ_CP025607.1_930903_931548_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_2|NZ_CP025607.1_931528_932080_-	NA	NA|218aa|down_3|NZ_CP025607.1_932229_932883_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_4|NZ_CP025607.1_932953_933982_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_5|NZ_CP025607.1_934670_935441_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_6|NZ_CP025607.1_935527_936340_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_7|NZ_CP025607.1_936407_937268_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|81aa|down_8|NZ_CP025607.1_937543_937786_+	NA	NA|431aa|down_9|NZ_CP025607.1_938062_939355_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_002886865.1_ASM288686v1	NZ_CP025607	Mycobacterium tuberculosis strain GG-186-10 chromosome, complete genome	6	1572165-1573237	3	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	1	1	1572365-1572386	NZ_CP025607.1_1212038-1212017	NA	15	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP025607.1_1563928_1564246_+,NA	NA|103aa|up_9|NZ_CP025607.1_1561443_1561752_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP025607.1_1561748_1563368_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP025607.1_1563928_1564246_+	NA	NA|209aa|up_6|NZ_CP025607.1_1564380_1565007_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP025607.1_1565072_1565405_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP025607.1_1565420_1566677_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP025607.1_1566804_1568016_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP025607.1_1568088_1569567_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP025607.1_1569563_1570949_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP025607.1_1571026_1572061_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP025607.1_1574091_1574493_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP025607.1_1574489_1574747_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP025607.1_1574829_1575789_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP025607.1_1575813_1576776_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|201aa|down_4|NZ_CP025607.1_1576909_1577512_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP025607.1_1577592_1579560_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP025607.1_1579577_1580402_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP025607.1_1580570_1581053_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP025607.1_1581124_1581949_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP025607.1_1582145_1583084_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_002886865.1_ASM288686v1	NZ_CP025607	Mycobacterium tuberculosis strain GG-186-10 chromosome, complete genome	7	2088286-2088540	3	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2088367-2088384|2088367-2088384|2088457-2088474	NZ_CP025607.1_401053-401036|NZ_CP025607.1_607395-607378|NZ_CP025607.1_3450207-3450190	NA	5	5	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP025607.1_2087645_2087909_-,NA	NA|165aa|up_9|NZ_CP025607.1_2073939_2074434_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP025607.1_2074837_2075515_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP025607.1_2075873_2078699_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP025607.1_2078925_2079786_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP025607.1_2079826_2080693_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP025607.1_2080697_2082584_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP025607.1_2082599_2084633_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP025607.1_2084752_2086978_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP025607.1_2087253_2087649_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP025607.1_2087645_2087909_-	NA	NA|346aa|down_0|NZ_CP025607.1_2089677_2090715_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP025607.1_2090714_2092082_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|479aa|down_2|NZ_CP025607.1_2092255_2093692_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP025607.1_2093727_2095179_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP025607.1_2095208_2096159_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP025607.1_2096173_2096590_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP025607.1_2096867_2097290_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|101aa|down_7|NZ_CP025607.1_2097338_2097641_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP025607.1_2097637_2097952_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP025607.1_2097951_2099685_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_002886865.1_ASM288686v1	NZ_CP025607	Mycobacterium tuberculosis strain GG-186-10 chromosome, complete genome	8	2168832-2169051	4	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NZ_CP025607.1_2159937_2160345_-,NA|127aa|down_5|NZ_CP025607.1_2176567_2176948_-	NA|216aa|up_9|NZ_CP025607.1_2153251_2153899_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NZ_CP025607.1_2153905_2156128_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NZ_CP025607.1_2156165_2156609_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NZ_CP025607.1_2156722_2157316_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NZ_CP025607.1_2157398_2158004_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NZ_CP025607.1_2158103_2159108_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NZ_CP025607.1_2159207_2159960_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NZ_CP025607.1_2159937_2160345_-	NA	NA|767aa|up_1|NZ_CP025607.1_2160479_2162780_+	PLN02892, PLN02892, isocitrate lyase	NA|1460aa|up_0|NZ_CP025607.1_2162949_2167329_-	pfam00823, PPE, PPE family	NA|155aa|down_0|NZ_CP025607.1_2171078_2171543_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP025607.1_2171640_2172504_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP025607.1_2172541_2173813_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP025607.1_2174084_2175200_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP025607.1_2175190_2176531_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP025607.1_2176567_2176948_-	NA	NA|621aa|down_6|NZ_CP025607.1_2177104_2178967_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP025607.1_2178974_2179454_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP025607.1_2179690_2180464_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|215aa|down_9|NZ_CP025607.1_2181257_2181902_-	TIGR03085, TIGR03085, TIGR03085 family protein
GCF_002886865.1_ASM288686v1	NZ_CP025607	Mycobacterium tuberculosis strain GG-186-10 chromosome, complete genome	9	3119175-3120535	2,5,4	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-B,Type III-C,Type III-A,Type III-D	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGA,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	35,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	15,17,18	18	TypeIII-B,TypeIII-C,TypeIII-A,TypeIII-D	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_7|NZ_CP025607.1_3112455_3112710_-,NA|135aa|up_6|NZ_CP025607.1_3112857_3113262_+,NA|64aa|up_5|NZ_CP025607.1_3113258_3113450_+,NA|86aa|up_3|NZ_CP025607.1_3115036_3115294_+,NA|104aa|up_2|NZ_CP025607.1_3115398_3115710_+,NA|203aa|up_1|NZ_CP025607.1_3116129_3116738_+,NA	NA|348aa|up_9|NZ_CP025607.1_3110770_3111814_-	COG5586, COG5586, Uncharacterized conserved protein [Function unknown]	NA|92aa|up_8|NZ_CP025607.1_3112004_3112280_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_7|NZ_CP025607.1_3112455_3112710_-	NA	NA|135aa|up_6|NZ_CP025607.1_3112857_3113262_+	NA	NA|64aa|up_5|NZ_CP025607.1_3113258_3113450_+	NA	NA|385aa|up_4|NZ_CP025607.1_3113648_3114803_+	pfam00665, rve, Integrase core domain	NA|86aa|up_3|NZ_CP025607.1_3115036_3115294_+	NA	NA|104aa|up_2|NZ_CP025607.1_3115398_3115710_+	NA	NA|203aa|up_1|NZ_CP025607.1_3116129_3116738_+	NA	NA|470aa|up_0|NZ_CP025607.1_3116808_3118218_+	pfam00665, rve, Integrase core domain	NA|421aa|down_0|NZ_CP025607.1_3120561_3121823_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_1|NZ_CP025607.1_3123620_3123962_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_2|NZ_CP025607.1_3123962_3124979_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_3|NZ_CP025607.1_3124991_3126140_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_4|NZ_CP025607.1_3126235_3127363_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_5|NZ_CP025607.1_3127359_3128268_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_6|NZ_CP025607.1_3128248_3128959_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_7|NZ_CP025607.1_3128968_3129343_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_8|NZ_CP025607.1_3129339_3131778_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_9|NZ_CP025607.1_3131774_3132497_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_002886865.1_ASM288686v1	NZ_CP025607	Mycobacterium tuberculosis strain GG-186-10 chromosome, complete genome	10	3121858-3123572	6,5,3	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-B,Type III-C,Type III-A,Type III-D	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	23,23,22	23	TypeIII-B,TypeIII-C,TypeIII-A,TypeIII-D	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP025607.1_3112455_3112710_-,NA|135aa|up_7|NZ_CP025607.1_3112857_3113262_+,NA|64aa|up_6|NZ_CP025607.1_3113258_3113450_+,NA|86aa|up_4|NZ_CP025607.1_3115036_3115294_+,NA|104aa|up_3|NZ_CP025607.1_3115398_3115710_+,NA|203aa|up_2|NZ_CP025607.1_3116129_3116738_+,NA	NA|92aa|up_9|NZ_CP025607.1_3112004_3112280_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP025607.1_3112455_3112710_-	NA	NA|135aa|up_7|NZ_CP025607.1_3112857_3113262_+	NA	NA|64aa|up_6|NZ_CP025607.1_3113258_3113450_+	NA	NA|385aa|up_5|NZ_CP025607.1_3113648_3114803_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP025607.1_3115036_3115294_+	NA	NA|104aa|up_3|NZ_CP025607.1_3115398_3115710_+	NA	NA|203aa|up_2|NZ_CP025607.1_3116129_3116738_+	NA	NA|470aa|up_1|NZ_CP025607.1_3116808_3118218_+	pfam00665, rve, Integrase core domain	NA|421aa|up_0|NZ_CP025607.1_3120561_3121823_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_0|NZ_CP025607.1_3123620_3123962_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_1|NZ_CP025607.1_3123962_3124979_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_2|NZ_CP025607.1_3124991_3126140_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_3|NZ_CP025607.1_3126235_3127363_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_4|NZ_CP025607.1_3127359_3128268_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_5|NZ_CP025607.1_3128248_3128959_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_6|NZ_CP025607.1_3128968_3129343_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_7|NZ_CP025607.1_3129339_3131778_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_8|NZ_CP025607.1_3131774_3132497_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_9|NZ_CP025607.1_3132896_3133442_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002886865.1_ASM288686v1	NZ_CP025607	Mycobacterium tuberculosis strain GG-186-10 chromosome, complete genome	11	3740681-3741222	6	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTNCCNCCGTTGCCGCC	23	0	0	NA	NA	NA	7	7	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP025607.1_3755324_3755612_-,NA|87aa|down_8|NZ_CP025607.1_3768734_3768995_-	NA|282aa|up_9|NZ_CP025607.1_3719929_3720775_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP025607.1_3721249_3721690_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP025607.1_3721723_3722593_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP025607.1_3722613_3723624_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|211aa|up_5|NZ_CP025607.1_3723908_3724541_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP025607.1_3724607_3725837_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP025607.1_3726119_3727469_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP025607.1_3727480_3728620_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP025607.1_3728616_3729348_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|2524aa|up_0|NZ_CP025607.1_3729356_3736928_-	pfam00823, PPE, PPE family	NA|86aa|down_0|NZ_CP025607.1_3743193_3743451_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP025607.1_3743707_3753181_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP025607.1_3753806_3754253_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP025607.1_3754289_3755030_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP025607.1_3755324_3755612_-	NA	NA|265aa|down_5|NZ_CP025607.1_3767344_3768139_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_6|NZ_CP025607.1_3768220_3768592_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_7|NZ_CP025607.1_3768489_3768708_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_8|NZ_CP025607.1_3768734_3768995_-	NA	NA|130aa|down_9|NZ_CP025607.1_3769109_3769499_+	pfam05305, DUF732, Protein of unknown function (DUF732)
GCF_002886865.1_ASM288686v1	NZ_CP025607	Mycobacterium tuberculosis strain GG-186-10 chromosome, complete genome	12	3935835-3936656	7	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CGGCGGCAACGGCGGAGCCGGCGG	24	11	43	3935859-3935894|3935919-3935939|3935964-3935984|3935964-3935984|3935964-3935984|3936009-3936035|3936060-3936080|3936060-3936080|3936060-3936080|3936060-3936080|3936060-3936080|3936060-3936080|3936105-3936128|3936105-3936128|3936105-3936128|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936153-3936170|3936195-3936209|3936195-3936209|3936315-3936335|3936315-3936335|3936315-3936335|3936567-3936587|3936612-3936632	NZ_CP025607.1_3935244-3935279|NZ_CP025607.1_3935304-3935324|NZ_CP025607.1_3934704-3934724|NZ_CP025607.1_3935349-3935369|NZ_CP025607.1_1092195-1092215|NZ_CP025607.1_3935394-3935420|NZ_CP025607.1_3935445-3935465|NZ_CP025607.1_3948807-3948827|NZ_CP025607.1_3949410-3949430|NZ_CP025607.1_1565121-1565101|NZ_CP025607.1_3934986-3935006|NZ_CP025607.1_3935601-3935621|NZ_CP025607.1_3934827-3934850|NZ_CP025607.1_3934875-3934898|NZ_CP025607.1_3935490-3935513|NZ_CP025607.1_3934923-3934940|NZ_CP025607.1_3935538-3935555|NZ_CP025607.1_337304-337287|NZ_CP025607.1_338348-338331|NZ_CP025607.1_673776-673759|NZ_CP025607.1_674466-674449|NZ_CP025607.1_675351-675334|NZ_CP025607.1_1216944-1216961|NZ_CP025607.1_1217424-1217441|NZ_CP025607.1_1634114-1634097|NZ_CP025607.1_1636909-1636892|NZ_CP025607.1_1637716-1637699|NZ_CP025607.1_1991661-1991644|NZ_CP025607.1_2922349-2922366|NZ_CP025607.1_3802311-3802328|NZ_CP025607.1_3931671-3931688|NZ_CP025607.1_3931995-3932012|NZ_CP025607.1_3934731-3934748|NZ_CP025607.1_3935376-3935393|NZ_CP025607.1_3946420-3946437|NZ_CP025607.1_3946744-3946761|NZ_CP025607.1_3934965-3934979|NZ_CP025607.1_3935580-3935594|NZ_CP025607.1_3741601-3741581|NZ_CP025607.1_1188942-1188922|NZ_CP025607.1_2046258-2046238|NZ_CP025607.1_1618283-1618263|NZ_CP025607.1_3932337-3932357	NA	16	16	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_6|NZ_CP025607.1_3953378_3954218_+	NA|351aa|up_9|NZ_CP025607.1_3916943_3917996_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|401aa|up_8|NZ_CP025607.1_3917995_3919198_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|281aa|up_7|NZ_CP025607.1_3919217_3920060_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|255aa|up_6|NZ_CP025607.1_3920094_3920859_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|318aa|up_5|NZ_CP025607.1_3921084_3922038_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_4|NZ_CP025607.1_3922062_3922254_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_3|NZ_CP025607.1_3922468_3923671_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_2|NZ_CP025607.1_3923695_3924817_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_1|NZ_CP025607.1_3924887_3926396_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1379aa|up_0|NZ_CP025607.1_3926566_3930703_+	pfam00934, PE, PE family	NA|516aa|down_0|NZ_CP025607.1_3936865_3938413_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|down_1|NZ_CP025607.1_3938409_3939246_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|1769aa|down_2|NZ_CP025607.1_3939605_3944912_+	pfam00934, PE, PE family	NA|219aa|down_3|NZ_CP025607.1_3945040_3945697_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_4|NZ_CP025607.1_3950771_3952418_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_5|NZ_CP025607.1_3952491_3953283_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_6|NZ_CP025607.1_3953378_3954218_+	NA	NA|399aa|down_7|NZ_CP025607.1_3954272_3955469_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_8|NZ_CP025607.1_3955497_3956208_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_9|NZ_CP025607.1_3956272_3957316_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family
GCF_002886865.1_ASM288686v1	NZ_CP025607	Mycobacterium tuberculosis strain GG-186-10 chromosome, complete genome	13	4110624-4110712	8	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_8|NZ_CP025607.1_4101210_4101981_-,NA|119aa|up_3|NZ_CP025607.1_4107115_4107472_+,NA|52aa|up_2|NZ_CP025607.1_4107571_4107727_+,NA|233aa|up_0|NZ_CP025607.1_4109728_4110427_-,NA|126aa|down_6|NZ_CP025607.1_4115947_4116325_+	NA|288aa|up_9|NZ_CP025607.1_4099592_4100456_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_8|NZ_CP025607.1_4101210_4101981_-	NA	NA|549aa|up_7|NZ_CP025607.1_4101977_4103624_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_6|NZ_CP025607.1_4103620_4104484_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_5|NZ_CP025607.1_4104476_4105403_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_4|NZ_CP025607.1_4105404_4107030_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|119aa|up_3|NZ_CP025607.1_4107115_4107472_+	NA	NA|52aa|up_2|NZ_CP025607.1_4107571_4107727_+	NA	NA|652aa|up_1|NZ_CP025607.1_4107737_4109693_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP025607.1_4109728_4110427_-	NA	NA|173aa|down_0|NZ_CP025607.1_4110772_4111291_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP025607.1_4111291_4112275_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP025607.1_4112267_4113461_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP025607.1_4113466_4114288_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP025607.1_4114419_4115103_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP025607.1_4115102_4115840_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP025607.1_4115947_4116325_+	NA	NA|225aa|down_7|NZ_CP025607.1_4116423_4117098_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP025607.1_4117201_4117996_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP025607.1_4118002_4118458_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
