The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP025603	Mycobacterium tuberculosis strain GG-121-10 chromosome, complete genome	4411510	2941163	2976529	4411510	transposase,terminase,protease,head,capsid,tRNA,integrase	Tupanvirus(11.11%)	41	2969964:2969991	2980946:2980973
WP_003413486.1|2941163_2943242_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2943350_2943578_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009938541.1|2943574_2944960_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2945304_2945805_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2945821_2946262_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2946408_2947086_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2947070_2947424_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2947436_2947862_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|2947858_2948533_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2948610_2949432_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2949567_2950461_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|2950463_2951282_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2951296_2952478_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2952536_2952968_-	hypoxic response protein Hrp1	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2953481_2954723_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2955032_2955395_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|2955741_2956866_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2956867_2957407_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|2957546_2958845_+	RtcB family protein	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2958883_2959165_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2959309_2959795_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|2959821_2960079_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938544.1|2960079_2962416_-	PE family protein	NA	NA	NA	NA	NA
WP_003899405.1|2962444_2962687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2962687_2963365_+	membrane protein	NA	NA	NA	NA	NA
WP_012054325.1|2963560_2964217_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2964379_2964826_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2965000_2965333_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2965452_2965812_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2965913_2966372_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2966507_2966888_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2966884_2968381_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_085972563.1|2968570_2968807_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|2968879_2969053_+	hypothetical protein	NA	NA	NA	NA	NA
2969964:2969991	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2970097_2970529_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2970525_2971524_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2971537_2972002_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_087902221.1|2972134_2973395_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003899411.1|2973769_2975209_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2975216_2975750_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_072464513.1|2975902_2976529_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
2980946:2980973	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP025603	Mycobacterium tuberculosis strain GG-121-10 chromosome, complete genome	4411510	3710430	3796359	4411510	transposase,tRNA	Burkholderia_virus(28.57%)	59	NA	NA
WP_087902221.1|3710430_3711691_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009937401.1|3711746_3711908_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3711929_3713459_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_003417413.1|3713391_3714330_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003902446.1|3714338_3715706_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3715774_3716992_+	D-alanyl-D-alanine carboxypeptidase DacB1	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3717087_3718596_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3718592_3719744_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3719934_3720780_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003900026.1|3721254_3721695_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3721728_3722598_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3722618_3723629_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009940431.1|3723913_3724546_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3724612_3725842_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3726124_3727474_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3727485_3728625_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3728621_3729353_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023642420.1|3729361_3736933_-	PPE family protein	NA	NA	NA	NA	NA
WP_009938644.1|3736981_3737998_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158650408.1|3738155_3742763_-	PE domain-containing protein	NA	NA	NA	NA	NA
WP_003417619.1|3743186_3743444_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_009938649.1|3743699_3753173_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3753798_3754245_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003900675.1|3754281_3755022_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3755316_3755604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009939158.1|3755940_3767091_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417738.1|3767334_3768129_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417739.1|3768210_3768582_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
WP_157132559.1|3768479_3768698_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417741.1|3768724_3768985_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417745.1|3769099_3769489_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3769502_3769796_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3769792_3770638_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3770761_3771037_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_003417760.1|3771033_3771291_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_012054356.1|3771332_3772523_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3772639_3773008_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3773004_3773556_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3773562_3774144_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3774124_3774493_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3774470_3774863_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003907034.1|3774859_3777490_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_003417878.1|3777725_3778190_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_009938654.1|3778556_3780332_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3780332_3780977_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003417882.1|3780975_3781410_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003908228.1|3781498_3784738_-	error-prone DNA polymerase DnaE2	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
WP_003900036.1|3784929_3786270_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3786311_3787487_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3787540_3787645_+	PE family protein	NA	NA	NA	NA	NA
WP_003900037.1|3787723_3788365_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3788365_3788614_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_012054357.1|3788618_3790046_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3790153_3790807_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3790845_3792351_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_003417908.1|3792355_3793246_-	diterpene synthase	NA	NA	NA	NA	NA
WP_003417910.1|3793254_3794865_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_075155233.1|3794809_3795055_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_087902221.1|3795097_3796359_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
