The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP025750	Xanthomonas campestris pv. campestris strain 3811 chromosome, complete genome	5072566	2737541	2770980	5072566	transposase,coat,protease	Xanthomonas_phage(75.0%)	27	NA	NA
WP_087942079.1|2737541_2738340_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_075272316.1|2738570_2739878_-	alginate export family protein	NA	NA	NA	NA	NA
WP_012438431.1|2739968_2740859_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_011037215.1|2741158_2741467_-	XapX domain-containing protein	NA	NA	NA	NA	NA
WP_043890335.1|2743097_2745206_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_012438434.1|2745730_2746099_-	response regulator	NA	NA	NA	NA	NA
WP_029217096.1|2746182_2747499_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_012438436.1|2747571_2747856_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016944917.1|2748621_2750325_-	ATPase	NA	NA	NA	NA	NA
WP_012438442.1|2752368_2753220_+|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_012438443.1|2753533_2756494_-|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
WP_012438445.1|2757654_2758710_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_012438446.1|2759033_2759309_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016944913.1|2759305_2761555_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_012438450.1|2762742_2762967_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129589014.1|2762963_2763317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081340508.1|2764887_2765928_+	replication initiation protein	NA	A0A077JDC0	Xanthomonas_phage	96.0	6.3e-197
WP_070698690.1|2765924_2766221_+	DNA-binding protein	NA	A0A1W6DXU2	Xanthomonas_phage	89.7	2.7e-44
WP_075272162.1|2766252_2766360_+|coat	coat protein	coat	NA	NA	NA	NA
WP_005918133.1|2766359_2766476_+|coat	Phi-Lf prophage-derived minor coat protein	coat	NA	NA	NA	NA
WP_005918131.1|2766503_2766632_+|coat	Phi-Lf prophage-derived major coat protein	coat	NA	NA	NA	NA
WP_016944907.1|2767535_2767775_+	hypothetical protein	NA	Q9XJ91	Xanthomonas_phage	94.9	1.1e-35
WP_011269757.1|2767785_2768106_+|coat	minor coat protein	coat	Q4LAU3	Stenotrophomonas_phage	44.2	3.5e-21
WP_016944906.1|2768107_2769430_+	hypothetical protein	NA	Q4LAU4	Stenotrophomonas_phage	56.7	2.0e-131
WP_075272161.1|2769449_2769758_-	chloride channel protein	NA	A0A1W6DXV7	Xanthomonas_phage	90.3	1.0e-46
WP_029217092.1|2769824_2770208_-	hypothetical protein	NA	A0A077JDD0	Xanthomonas_phage	80.3	1.7e-54
WP_012438452.1|2770329_2770980_-	conjugal transfer protein TrbP	NA	A0A077JBM8	Xanthomonas_phage	49.8	1.0e-48
>prophage 2
NZ_CP025750	Xanthomonas campestris pv. campestris strain 3811 chromosome, complete genome	5072566	2816748	2866953	5072566	transposase	Acidithiobacillus_phage(40.0%)	48	NA	NA
WP_087942083.1|2816748_2817893_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	58.8	1.8e-88
WP_011038670.1|2818226_2819240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_102650942.1|2820920_2821850_+	DUF3577 domain-containing protein	NA	NA	NA	NA	NA
WP_012438484.1|2821911_2822592_+	DUF3275 family protein	NA	NA	NA	NA	NA
WP_075272156.1|2822684_2823008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012438486.1|2823135_2823786_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012438487.1|2823849_2824959_+	O-methyltransferase	NA	NA	NA	NA	NA
WP_012438488.1|2825007_2825328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012438489.1|2825416_2825716_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012438490.1|2825865_2828145_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
WP_011036443.1|2828627_2829608_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.0	2.2e-98
WP_075272155.1|2829812_2831627_-	ATP-dependent helicase	NA	NA	NA	NA	NA
WP_012438492.1|2831613_2833401_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_012438493.1|2833621_2834221_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012438494.1|2834217_2834868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012438495.1|2834882_2835605_+	TIGR03759 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_029217030.1|2835586_2836192_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_012438497.1|2836188_2836737_+	integrating conjugative element protein	NA	NA	NA	NA	NA
WP_012438498.1|2836741_2838931_+	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA	NA
WP_012438499.1|2838927_2839677_+	TIGR03747 family integrating conjugative element membrane protein	NA	NA	NA	NA	NA
WP_012438500.1|2839775_2840156_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012438501.1|2840152_2840386_+	TIGR03758 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_015471975.1|2840402_2840762_+	TIGR03745 family integrating conjugative element membrane protein	NA	NA	NA	NA	NA
WP_012438502.1|2840772_2841183_+	TIGR03750 family conjugal transfer protein	NA	NA	NA	NA	NA
WP_012438503.1|2841179_2841869_+	TIGR03746 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_012438504.1|2841865_2842792_+	TIGR03749 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_011269706.1|2842781_2844212_+	TIGR03752 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_011269705.1|2844192_2844636_+	TIGR03751 family conjugal transfer lipoprotein	NA	NA	NA	NA	NA
WP_012438505.1|2844635_2847500_+	conjugative transfer ATPase	NA	NA	NA	NA	NA
WP_011269703.1|2847515_2848280_+	DsbA family protein	NA	NA	NA	NA	NA
WP_011269702.1|2848464_2848959_+	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_011269701.1|2849119_2849566_+	TIGR03757 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_012438507.1|2849562_2850528_+	TIGR03756 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_012438508.1|2850538_2851933_+	integrating conjugative element protein	NA	NA	NA	NA	NA
WP_011269698.1|2851929_2852277_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012438509.1|2852292_2853813_+	conjugal transfer protein TraG	NA	NA	NA	NA	NA
WP_011269696.1|2853824_2854190_-	DUF3742 family protein	NA	NA	NA	NA	NA
WP_012438510.1|2854275_2854908_-	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_012438511.1|2854920_2855547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012438512.1|2855861_2857790_+	DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_043890265.1|2857862_2858447_-	DUF4189 domain-containing protein	NA	NA	NA	NA	NA
WP_011037261.1|2858401_2859364_-|transposase	IS1595-like element ISXca4 family transposase	transposase	NA	NA	NA	NA
WP_012438515.1|2859669_2861052_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011035783.1|2861490_2862858_+|transposase	IS5-like element IS1478 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.6	2.8e-80
WP_158667460.1|2862878_2863043_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087942064.1|2863041_2864173_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.8	3.7e-49
WP_129589049.1|2864304_2865423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011035783.1|2865585_2866953_+|transposase	IS5-like element IS1478 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	63.6	2.8e-80
>prophage 3
NZ_CP025750	Xanthomonas campestris pv. campestris strain 3811 chromosome, complete genome	5072566	3229505	3249294	5072566	integrase,transposase	Leptospira_phage(60.0%)	15	3229382:3229398	3256265:3256281
3229382:3229398	attL	TCCGCCCACCTCCACCA	NA	NA	NA	NA
WP_012438743.1|3229505_3231038_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_012438744.1|3231054_3232938_+	DUF4209 domain-containing protein	NA	NA	NA	NA	NA
WP_012438745.1|3232995_3233964_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012438746.1|3233956_3234214_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087942073.1|3234212_3235344_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.8	1.4e-48
WP_087942069.1|3236349_3237481_+|transposase	IS3-like element IS476 family transposase	transposase	S5WIU1	Leptospira_phage	44.1	3.8e-54
WP_043890346.1|3238877_3239573_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012438750.1|3239739_3241326_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029216811.1|3241581_3241878_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_012438752.1|3242049_3242361_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158667461.1|3242894_3243575_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087942074.1|3244251_3245360_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	38.7	4.5e-44
WP_012438758.1|3245616_3245943_+	conjugal transfer protein TraD	NA	NA	NA	NA	NA
WP_087942063.1|3245971_3247116_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	58.8	3.1e-88
WP_012438063.1|3248313_3249294_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	3.7e-98
3256265:3256281	attR	TCCGCCCACCTCCACCA	NA	NA	NA	NA
>prophage 4
NZ_CP025750	Xanthomonas campestris pv. campestris strain 3811 chromosome, complete genome	5072566	4224872	4231255	5072566		Enterobacteria_phage(50.0%)	6	NA	NA
WP_012439274.1|4224872_4226219_+	phosphohexose mutase	NA	A0A127AWJ1	Bacillus_phage	26.6	3.1e-31
WP_012439275.1|4226264_4227668_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	30.1	5.0e-48
WP_012439276.1|4227789_4228698_-	dTDP-4-dehydrorhamnose reductase	NA	A0A1D7XFA3	Escherichia_phage	33.6	3.7e-28
WP_011035866.1|4228694_4229252_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	49.4	4.3e-43
WP_012439277.1|4229248_4230136_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	57.8	1.2e-95
WP_012439278.1|4230199_4231255_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	47.6	4.0e-82
