assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002865845.1_ASM286584v1	NZ_CP013847	Clostridium botulinum strain Af650 chromosome, complete genome	1	1179566-1179917	1,1	CRISPRCasFinder,CRT	no		csa3,DEDDh,DinG,WYL,cas3	Orphan	TGAACATTAACATGAGATGTATTTAAAT,TGAACANTAACATNAGATGTATTTAAAT	28,28	0	0	NA	NA	III-B:III-B	5,5	5	Orphan	csa3,DEDDh,DinG,WYL,cas3	NA,NA|101aa|down_4|NZ_CP013847.1_1189173_1189476_-	NA|587aa|up_9|NZ_CP013847.1_1169467_1171228_-	PRK14479, PRK14479, dihydroxyacetone kinase; Provisional	NA|377aa|up_8|NZ_CP013847.1_1171238_1172369_-	PRK09423, gldA, glycerol dehydrogenase; Provisional	NA|346aa|up_7|NZ_CP013847.1_1172889_1173927_-	pfam10114, PocR, Sensory domain found in PocR	NA|155aa|up_6|NZ_CP013847.1_1174372_1174837_+	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|148aa|up_5|NZ_CP013847.1_1175043_1175487_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|198aa|up_4|NZ_CP013847.1_1175639_1176233_+	pfam07081, DUF1349, Protein of unknown function (DUF1349)	NA|68aa|up_3|NZ_CP013847.1_1176296_1176500_+	pfam12663, DUF3788, Protein of unknown function (DUF3788)	NA|282aa|up_2|NZ_CP013847.1_1176617_1177463_+	cd19157, AKR_AKR5G1-3, AKR5G family of aldo-keto reductase (AKR)	NA|108aa|up_1|NZ_CP013847.1_1177564_1177888_+	COG3070, TfoX, Regulator of competence-specific genes [Transcription]	NA|285aa|up_0|NZ_CP013847.1_1177933_1178788_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|323aa|down_0|NZ_CP013847.1_1180530_1181499_+	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|336aa|down_1|NZ_CP013847.1_1182503_1183511_-	PRK09358, PRK09358, adenosine deaminase; Provisional	NA|723aa|down_2|NZ_CP013847.1_1184407_1186576_+	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|720aa|down_3|NZ_CP013847.1_1186601_1188761_+	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|101aa|down_4|NZ_CP013847.1_1189173_1189476_-	NA	NA|252aa|down_5|NZ_CP013847.1_1189681_1190437_+	pfam13803, DUF4184, Domain of unknown function (DUF4184)	NA|710aa|down_6|NZ_CP013847.1_1190680_1192810_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|144aa|down_7|NZ_CP013847.1_1192920_1193352_+	cd01046, Rubrerythrin_like, rubrerythrin-like, diiron-binding domain	NA|182aa|down_8|NZ_CP013847.1_1193635_1194181_-	PRK09453, PRK09453, phosphodiesterase; Provisional	NA|128aa|down_9|NZ_CP013847.1_1194816_1195200_+	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins
GCF_002865845.1_ASM286584v1	NZ_CP013847	Clostridium botulinum strain Af650 chromosome, complete genome	2	2456513-2456805	2,2,1	CRISPRCasFinder,CRT,PILER-CR	no		csa3,DEDDh,DinG,WYL,cas3	Orphan	ATTTAAATACATCTCATGTTAATGTTCAAC,ATTTAAATACATCTCATGTTAATGTTCAAC,ATTTAAATACATCTCATGTTAATGTTCAAC	30,30,30	1	1	2456608-2456644	NZ_CP013847.1_1695148-1695184	III-B:III-B:III-B	4,4,3	4	Orphan	csa3,DEDDh,DinG,WYL,cas3	NA|98aa|up_1|NZ_CP013847.1_2455253_2455547_-,NA|64aa|up_0|NZ_CP013847.1_2455700_2455892_-,NA|300aa|down_7|NZ_CP013847.1_2466791_2467691_+	NA|205aa|up_9|NZ_CP013847.1_2446624_2447239_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|118aa|up_8|NZ_CP013847.1_2447549_2447903_+	pfam16189, Creatinase_N_2, Creatinase/Prolidase N-terminal domain	NA|469aa|up_7|NZ_CP013847.1_2448233_2449640_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|up_6|NZ_CP013847.1_2449743_2450484_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|297aa|up_5|NZ_CP013847.1_2450490_2451381_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|174aa|up_4|NZ_CP013847.1_2451681_2452203_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|666aa|up_3|NZ_CP013847.1_2452313_2454311_-	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|266aa|up_2|NZ_CP013847.1_2454407_2455205_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|up_1|NZ_CP013847.1_2455253_2455547_-	NA	NA|64aa|up_0|NZ_CP013847.1_2455700_2455892_-	NA	NA|312aa|down_0|NZ_CP013847.1_2457346_2458282_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|494aa|down_1|NZ_CP013847.1_2458606_2460088_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|151aa|down_2|NZ_CP013847.1_2461137_2461590_+	pfam12638, Staygreen, Staygreen protein	NA|149aa|down_3|NZ_CP013847.1_2461671_2462118_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|344aa|down_4|NZ_CP013847.1_2462285_2463317_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|451aa|down_5|NZ_CP013847.1_2463582_2464935_-	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases	NA|448aa|down_6|NZ_CP013847.1_2465010_2466354_-	TIGR03173, pbuX, xanthine permease	NA|300aa|down_7|NZ_CP013847.1_2466791_2467691_+	NA	NA|441aa|down_8|NZ_CP013847.1_2468030_2469353_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|245aa|down_9|NZ_CP013847.1_2469420_2470155_-	cd00180, PKc, Catalytic domain of Protein Kinases
GCF_002865845.1_ASM286584v1	NZ_CP013847	Clostridium botulinum strain Af650 chromosome, complete genome	3	2460584-2460808	2,3,3	PILER-CR,CRISPRCasFinder,CRT	no		csa3,DEDDh,DinG,WYL,cas3	Orphan	ATTTAAATACATCTCATGTTAATGTTCAAC,ATTTAAATACATCTCATGTTAATGTTCAAC,ATTTAAATACATCTCATGTTA	30,30,21	0	0	NA	NA	III-B:III-B:III-B	3,3,3	3	Orphan	csa3,DEDDh,DinG,WYL,cas3	NA|98aa|up_3|NZ_CP013847.1_2455253_2455547_-,NA|64aa|up_2|NZ_CP013847.1_2455700_2455892_-,NA|300aa|down_5|NZ_CP013847.1_2466791_2467691_+	NA|469aa|up_9|NZ_CP013847.1_2448233_2449640_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|up_8|NZ_CP013847.1_2449743_2450484_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|297aa|up_7|NZ_CP013847.1_2450490_2451381_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|174aa|up_6|NZ_CP013847.1_2451681_2452203_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|666aa|up_5|NZ_CP013847.1_2452313_2454311_-	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|266aa|up_4|NZ_CP013847.1_2454407_2455205_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|up_3|NZ_CP013847.1_2455253_2455547_-	NA	NA|64aa|up_2|NZ_CP013847.1_2455700_2455892_-	NA	NA|312aa|up_1|NZ_CP013847.1_2457346_2458282_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|494aa|up_0|NZ_CP013847.1_2458606_2460088_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|151aa|down_0|NZ_CP013847.1_2461137_2461590_+	pfam12638, Staygreen, Staygreen protein	NA|149aa|down_1|NZ_CP013847.1_2461671_2462118_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|344aa|down_2|NZ_CP013847.1_2462285_2463317_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|451aa|down_3|NZ_CP013847.1_2463582_2464935_-	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases	NA|448aa|down_4|NZ_CP013847.1_2465010_2466354_-	TIGR03173, pbuX, xanthine permease	NA|300aa|down_5|NZ_CP013847.1_2466791_2467691_+	NA	NA|441aa|down_6|NZ_CP013847.1_2468030_2469353_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|245aa|down_7|NZ_CP013847.1_2469420_2470155_-	cd00180, PKc, Catalytic domain of Protein Kinases	NA|258aa|down_8|NZ_CP013847.1_2470641_2471415_-	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]	NA|567aa|down_9|NZ_CP013847.1_2471491_2473192_-	COG3949, COG3949, Uncharacterized membrane protein [Function unknown]
GCF_002865845.1_ASM286584v1	NZ_CP013847	Clostridium botulinum strain Af650 chromosome, complete genome	4	2564260-2564746	4,4,3	CRISPRCasFinder,CRT,PILER-CR	no		csa3,DEDDh,DinG,WYL,cas3	Orphan	ATTTAAATACATCATATGTTACTGTTCAAC,ATTTAAATACATCNTATGTTANTGTTCAAC,ATTTAAATACATCATATGTTACTGTTCAAC	30,30,30	0	0	NA	NA	III-B:III-B:III-B	7,7,3	7	Orphan	csa3,DEDDh,DinG,WYL,cas3	NA|68aa|up_8|NZ_CP013847.1_2556947_2557151_-,NA|785aa|up_5|NZ_CP013847.1_2559151_2561506_-,NA|79aa|up_4|NZ_CP013847.1_2561487_2561724_-,NA|135aa|up_3|NZ_CP013847.1_2561736_2562141_-,NA|56aa|up_2|NZ_CP013847.1_2562500_2562668_-,NA|183aa|up_0|NZ_CP013847.1_2563468_2564017_+,NA|77aa|down_0|NZ_CP013847.1_2565200_2565431_-,NA|183aa|down_1|NZ_CP013847.1_2565788_2566337_-,NA|330aa|down_2|NZ_CP013847.1_2566348_2567338_-,NA|65aa|down_4|NZ_CP013847.1_2568384_2568579_-,NA|54aa|down_6|NZ_CP013847.1_2568956_2569118_-,NA|99aa|down_7|NZ_CP013847.1_2569117_2569414_-	NA|66aa|up_9|NZ_CP013847.1_2556390_2556588_-	PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional	NA|68aa|up_8|NZ_CP013847.1_2556947_2557151_-	NA	NA|63aa|up_7|NZ_CP013847.1_2557963_2558152_+	pfam12788, YmaF, YmaF family	NA|117aa|up_6|NZ_CP013847.1_2558793_2559144_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|785aa|up_5|NZ_CP013847.1_2559151_2561506_-	NA	NA|79aa|up_4|NZ_CP013847.1_2561487_2561724_-	NA	NA|135aa|up_3|NZ_CP013847.1_2561736_2562141_-	NA	NA|56aa|up_2|NZ_CP013847.1_2562500_2562668_-	NA	NA|57aa|up_1|NZ_CP013847.1_2562857_2563028_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|183aa|up_0|NZ_CP013847.1_2563468_2564017_+	NA	NA|77aa|down_0|NZ_CP013847.1_2565200_2565431_-	NA	NA|183aa|down_1|NZ_CP013847.1_2565788_2566337_-	NA	NA|330aa|down_2|NZ_CP013847.1_2566348_2567338_-	NA	NA|254aa|down_3|NZ_CP013847.1_2567585_2568347_-	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3	NA|65aa|down_4|NZ_CP013847.1_2568384_2568579_-	NA	NA|85aa|down_5|NZ_CP013847.1_2568595_2568850_-	pfam10779, XhlA, Haemolysin XhlA	NA|54aa|down_6|NZ_CP013847.1_2568956_2569118_-	NA	NA|99aa|down_7|NZ_CP013847.1_2569117_2569414_-	NA	NA|389aa|down_8|NZ_CP013847.1_2569429_2570596_-	pfam12571, DUF3751, Phage tail-collar fibre protein	NA|212aa|down_9|NZ_CP013847.1_2570598_2571234_-	pfam10076, DUF2313, Uncharacterized protein conserved in bacteria (DUF2313)
GCF_002865845.1_ASM286584v1	NZ_CP013847	Clostridium botulinum strain Af650 chromosome, complete genome	5	2656926-2657285	5,5	CRISPRCasFinder,CRT	no		csa3,DEDDh,DinG,WYL,cas3	Orphan	ATTTAAATACATCTCATGTTAATGTTCAAT,ATTTAAATACATCNNATGTTAATGTTCAA	30,29	1	1	2657220-2657255	NZ_CP013847.1_1696708-1696743	III-B:III-B	5,5	5	Orphan	csa3,DEDDh,DinG,WYL,cas3	NA,NA|65aa|down_1|NZ_CP013847.1_2658303_2658498_-,NA|237aa|down_3|NZ_CP013847.1_2658872_2659583_-,NA|156aa|down_4|NZ_CP013847.1_2659806_2660274_-,NA|130aa|down_5|NZ_CP013847.1_2660938_2661328_-,NA|70aa|down_6|NZ_CP013847.1_2661449_2661659_-,NA|102aa|down_7|NZ_CP013847.1_2661674_2661980_-	NA|55aa|up_9|NZ_CP013847.1_2648892_2649057_-	cd11874, SH3_CD2AP-like_2, Second Src Homology 3 domain (SH3B) of CD2-associated protein and similar proteins	NA|417aa|up_8|NZ_CP013847.1_2650210_2651461_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|227aa|up_7|NZ_CP013847.1_2651453_2652134_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|180aa|up_6|NZ_CP013847.1_2652126_2652666_-	cd14360, UBA_NAC_like_bac, UBA-like domain found in uncharacterized bacteria proteins similar to eukaryotic nascent polypeptide-associated complex proteins (NAC)	NA|181aa|up_5|NZ_CP013847.1_2652816_2653359_-	cd14360, UBA_NAC_like_bac, UBA-like domain found in uncharacterized bacteria proteins similar to eukaryotic nascent polypeptide-associated complex proteins (NAC)	NA|37aa|up_4|NZ_CP013847.1_2653600_2653711_-	pfam12841, YvrJ, YvrJ protein family	NA|270aa|up_3|NZ_CP013847.1_2653717_2654527_-	PRK06921, PRK06921, hypothetical protein; Provisional	NA|83aa|up_2|NZ_CP013847.1_2655262_2655511_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|60aa|up_1|NZ_CP013847.1_2655909_2656089_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|138aa|up_0|NZ_CP013847.1_2656147_2656561_+	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|254aa|down_0|NZ_CP013847.1_2657500_2658262_-	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3	NA|65aa|down_1|NZ_CP013847.1_2658303_2658498_-	NA	NA|85aa|down_2|NZ_CP013847.1_2658514_2658769_-	pfam10779, XhlA, Haemolysin XhlA	NA|237aa|down_3|NZ_CP013847.1_2658872_2659583_-	NA	NA|156aa|down_4|NZ_CP013847.1_2659806_2660274_-	NA	NA|130aa|down_5|NZ_CP013847.1_2660938_2661328_-	NA	NA|70aa|down_6|NZ_CP013847.1_2661449_2661659_-	NA	NA|102aa|down_7|NZ_CP013847.1_2661674_2661980_-	NA	NA|415aa|down_8|NZ_CP013847.1_2661995_2663240_-	pfam12571, DUF3751, Phage tail-collar fibre protein	NA|209aa|down_9|NZ_CP013847.1_2663243_2663870_-	pfam10076, DUF2313, Uncharacterized protein conserved in bacteria (DUF2313)
