The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	27282	79602	4109385	tRNA,transposase	Synechococcus_phage(25.0%)	49	NA	NA
WP_010929577.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929579.1|29141_30368_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010929581.1|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023995008.1|32163_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814398.1|35571_36762_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814400.1|36948_37923_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37924_40063_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40059_40599_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40602_41331_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41317_42211_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42281_42677_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42686_43217_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43345_43645_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|43662_44613_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815267.1|45112_45748_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45719_45956_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46083_46977_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|48146_49394_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49390_50005_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_029443813.1|51132_52389_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53620_54355_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54360_54951_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54975_55665_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55661_56423_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56502_57402_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57495_58446_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59246_60473_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|60472_60892_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61075_62017_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929598.1|62440_63277_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929599.1|63471_64053_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_019248465.1|64065_64383_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64486_65545_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65579_66851_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67480_68662_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69083_70034_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816713.1|70127_70442_+	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
WP_010929604.1|71634_73542_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
WP_010929605.1|73703_74324_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_003807804.1|74355_74937_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
WP_003807805.1|75025_75277_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929606.1|75278_76121_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_010929607.1|76226_77636_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_005012067.1|77632_78583_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78657_79602_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	107425	175248	4109385	tRNA,transposase	Bacillus_phage(22.22%)	58	NA	NA
WP_010929626.1|107425_108376_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109275_110469_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110550_111180_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111241_111925_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111934_113617_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113904_114252_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114342_114660_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114942_115959_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116034_116835_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116831_117707_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117717_119010_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119052_120093_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120198_121020_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121120_122071_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122168_123074_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123070_123904_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124740_125751_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125747_126137_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127030_128284_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128374_130075_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130501_131149_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131147_132587_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|132679_132982_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|133009_133888_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135154_136105_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120810.1|136091_136235_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815155.1|136523_138032_-	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA	NA
WP_019247146.1|138778_142741_+	FAD/FMN-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929644.1|142793_143576_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929645.1|143663_144887_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929646.1|144870_145803_-	alpha/beta hydrolase fold domain-containing protein	NA	NA	NA	NA	NA
WP_003817676.1|145808_146621_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_033446330.1|147933_148857_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815135.1|149023_149806_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929648.1|150572_151553_-	biotin-dependent carboxyltransferase	NA	NA	NA	NA	NA
WP_010929649.1|151549_152278_-	5-oxoprolinase subunit PxpB	NA	NA	NA	NA	NA
WP_003815126.1|152302_152734_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929650.1|152835_153711_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929651.1|153761_154982_-	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	42.6	3.2e-91
WP_010929652.1|155065_155527_-	DUF411 domain-containing protein	NA	NA	NA	NA	NA
WP_010929653.1|155632_157030_-	heavy metal sensor histidine kinase	NA	NA	NA	NA	NA
WP_010929654.1|157026_157704_-	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.2	1.5e-29
WP_010929655.1|157759_159070_-	phosphate regulon sensor histidine kinase PhoR	NA	A0A1V0SGX0	Hokovirus	25.5	6.2e-16
WP_003815113.1|159081_159780_-	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	37.1	8.6e-33
WP_003815111.1|159943_160720_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_010929656.1|160885_161908_+	Tim44 domain-containing protein	NA	NA	NA	NA	NA
WP_023853232.1|162136_162772_+	SCP-2 sterol transfer family protein	NA	NA	NA	NA	NA
WP_010929658.1|162768_164331_+	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	A0A2N9QVT9	Dishui_lake_phycodnavirus	28.7	1.0e-33
WP_005015810.1|164889_165840_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167283_168186_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168163_168793_-	LemA family protein	NA	NA	NA	NA	NA
WP_029443820.1|169123_170506_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
WP_010929661.1|170539_171169_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171217_172825_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172849_173533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173614_174091_-	bacterioferritin	NA	NA	NA	NA	NA
WP_077068973.1|174131_174311_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|174297_175248_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	194400	266515	4109385	tRNA,transposase,protease	Prochlorococcus_phage(25.0%)	58	NA	NA
WP_010929591.1|194400_195351_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879535.1|195396_196089_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
WP_019248671.1|196085_196979_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197373_198474_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198555_198930_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198989_201854_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|201998_202739_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202808_204020_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204048_205017_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929699.1|206736_207060_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_010929698.1|207164_208214_-	cyclase	NA	NA	NA	NA	NA
WP_003819081.1|208210_209035_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209035_209332_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209357_209633_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209689_210334_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210333_211020_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|211149_212001_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212051_212777_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212808_214158_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214269_215202_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|215659_218455_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|219048_221991_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222062_222782_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222820_223369_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223523_224423_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224447_225398_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818947.1|225615_226311_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247308.1|226327_227740_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929684.1|227852_229283_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929683.1|229324_231238_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929682.1|231556_232123_+	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929681.1|232213_233215_+	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_010927663.1|234365_235316_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235312_236263_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302767.1|236249_236423_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929700.1|236361_237159_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238108_238519_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|239540_240284_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240327_241371_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241541_243644_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245054_246011_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246029_246521_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246517_247873_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247873_248572_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_003814339.1|249521_250571_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250676_251618_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251614_253504_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253590_254229_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|254371_255757_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255687_256224_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256375_257767_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257783_258764_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258899_259883_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259947_260847_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260953_262708_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262715_263840_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263853_264834_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|265564_266515_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	277131	331324	4109385	transposase,protease	Pithovirus(14.29%)	54	NA	NA
WP_005012067.1|277131_278082_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068974.1|278068_278284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|278359_278521_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|278528_278669_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|279187_279637_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279646_280258_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_019247426.1|280416_281271_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281290_282673_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282737_283379_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283518_283977_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284001_284778_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284831_285968_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285964_286915_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807705.1|287013_287640_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_003807706.1|287662_288589_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003819100.1|288597_290184_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929723.1|290180_291185_-	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003807710.1|291384_292245_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|292276_293278_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003819104.1|293348_294158_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003819105.1|294235_296095_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_010929725.1|296223_297426_-	MFS transporter	NA	NA	NA	NA	NA
WP_004566082.1|297539_298421_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004566083.1|299923_300484_-	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_154299516.1|301479_301638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111735998.1|301684_301972_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930048.1|302060_303011_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929727.1|303007_304006_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815019.1|304048_304552_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929728.1|304555_305446_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003815015.1|305668_306832_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003815013.1|306928_307849_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815011.1|307852_308818_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815010.1|308814_309609_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	23.5	2.6e-09
WP_010929729.1|309602_310307_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
WP_010929730.1|313670_314534_+	enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010929731.1|314536_315706_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814996.1|315746_317396_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.2	2.6e-56
WP_003814993.1|317397_317832_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814990.1|317856_318258_+	RidA family protein	NA	NA	NA	NA	NA
WP_010929732.1|318351_319977_-	DUF342 domain-containing protein	NA	NA	NA	NA	NA
WP_010929733.1|320216_321500_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_003814984.1|321516_322170_-	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_003814980.1|323130_323295_+	rubredoxin	NA	NA	NA	NA	NA
WP_019248876.1|323310_323988_+	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_010929735.1|323980_324382_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_003820560.1|324395_325349_+	aspartate carbamoyltransferase catalytic subunit	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	35.8	2.5e-30
WP_010929736.1|325345_326521_+	dihydroorotase	NA	NA	NA	NA	NA
WP_010929737.1|326640_327381_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929738.1|327417_328251_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA	NA
WP_023852939.1|328247_329516_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_003814960.1|329522_330251_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
WP_153302769.1|330237_330387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|330373_331324_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	390845	448353	4109385	transposase	Orpheovirus(14.29%)	51	NA	NA
WP_005012067.1|390845_391796_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219862.1|391782_391950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010927231.1|391932_392850_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392846_393095_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393091_394297_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394369_395365_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395387_396608_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396604_397249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398979_399789_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014906040.1|400006_401047_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	6.1e-59
WP_023994705.1|401015_401159_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486049.1|401145_402129_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402055_402757_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402805_403576_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003819219.1|403572_404814_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486053.1|406620_407517_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407557_409147_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|409196_410189_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410257_410857_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076879611.1|411317_412295_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412373_413324_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413412_414327_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414323_414983_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415072_415996_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416001_416457_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|416453_417557_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734664.1|417512_417785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010927086.1|417744_419364_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419360_420419_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420548_421043_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421135_422113_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422308_423514_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423510_425022_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425037_426351_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426541_426721_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427130_427865_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|430309_431260_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|431391_431790_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432200_432671_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432759_433104_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433203_434604_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436392_436911_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437021_437777_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437972_439205_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439197_439983_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440049_441021_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441031_442009_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442134_443307_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929793.1|443333_444362_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444427_445621_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447402_448353_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	590403	651592	4109385	transposase,protease	uncultured_Mediterranean_phage(40.0%)	56	NA	NA
WP_005013747.1|590403_591354_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|591829_592720_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|592716_593538_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|593737_594229_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|594247_595321_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|595367_596471_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|596546_597167_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|597187_597697_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|597751_598003_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_077108607.1|597999_599199_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|599206_599593_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|599589_602109_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|602537_602876_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|602872_603379_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|603440_604241_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|604351_605293_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|605386_606922_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|608601_610452_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|610455_611289_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|611288_612230_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003808546.1|612481_613477_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|613594_615883_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|616188_617097_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|617151_618117_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_062810229.1|618191_619853_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_023853074.1|619849_620635_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|620783_621734_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|622432_622816_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|622873_623476_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|623493_623895_-	DoxX family protein	NA	NA	NA	NA	NA
WP_003814158.1|624028_624922_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|624918_625500_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|626294_627029_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|627069_628119_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|628266_628845_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|629231_630209_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|630302_634697_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|634897_635746_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|635904_636717_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|636772_637723_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219861.1|637709_637874_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931453.1|637821_638622_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|638683_639067_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931454.1|639078_640512_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814188.1|640718_641048_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_003814191.1|641050_641719_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|641982_642903_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|642949_643162_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|643184_643607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931458.1|643623_644724_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|644820_646338_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|646413_647253_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_003814205.1|647274_648156_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|648237_649332_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|649625_650576_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|650650_651592_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	656910	704155	4109385	tail,terminase,tRNA,transposase	uncultured_Caudovirales_phage(17.39%)	52	NA	NA
WP_003814219.1|656910_657942_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|657982_658222_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|658291_659881_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|659880_660429_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|660509_661082_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|661100_662012_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|662085_663054_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|663176_664250_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|664254_666075_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_033446132.1|667189_667525_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|667658_668309_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|668330_669749_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|669818_670574_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|670542_671301_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|671311_672193_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|672209_672917_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|672919_673678_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|673887_675630_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|675622_676147_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|676186_676981_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|677148_678222_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|678320_679271_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|679369_680320_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931452.1|680571_680784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|680849_681461_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_010931450.1|681940_682261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931449.1|682253_682952_-	membrane protein	NA	NA	NA	NA	NA
WP_023853183.1|682966_683188_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|683205_684156_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931448.1|684831_685281_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
WP_010931447.1|685267_686545_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|686547_687966_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|687994_689050_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|689055_689298_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|689420_690023_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|690451_691402_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853024.1|691419_692067_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
WP_010931442.1|692076_692328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|692390_692873_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931440.1|692874_693075_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|693074_693470_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|693466_693865_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|693861_694284_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|694291_694792_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|695046_695565_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|695574_695904_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|695921_696212_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|696237_698850_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|698859_699219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|699286_699820_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|699816_700206_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|700198_704155_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	710321	780395	4109385	tRNA,transposase	Planktothrix_phage(40.0%)	60	NA	NA
WP_003814636.1|710321_712052_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|712104_712533_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|712535_713216_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|713215_713674_+	protein TolR	NA	NA	NA	NA	NA
WP_010931417.1|714700_716017_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|716048_716546_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|716632_717322_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|717321_718371_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|718367_719162_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|719330_719681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|719656_720214_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_076879618.1|721138_721357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|721343_722294_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814416.1|724572_725661_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|725663_727106_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|727210_728356_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|728387_729185_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|729209_730769_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|730765_733138_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|733247_734351_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|734350_735043_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|735186_735888_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|735872_736250_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|736981_737932_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852750.1|737918_738062_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814441.1|738091_738964_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|739304_739523_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|739562_740942_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|740983_742381_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|742420_744073_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|744076_744961_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|744960_745902_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|745980_747600_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|747766_748582_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|748649_749219_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|749219_750170_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|750824_751922_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|751955_753221_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|753377_754328_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|754571_755162_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|755177_757622_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|757741_758713_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|758844_759369_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_010929984.1|760499_762695_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|762767_763175_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_077068980.1|763122_763311_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|763297_764248_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807452.1|764363_764807_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010925762.1|764869_765664_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807457.1|765829_766966_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_003807459.1|767036_768170_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807460.1|768319_768580_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807462.1|768613_768925_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_010929987.1|769349_770498_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
WP_010929988.1|770612_771578_+	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929989.1|771846_772713_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929990.1|772843_774892_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929991.1|774909_776907_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929992.1|776941_778279_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_023853308.1|778541_780395_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	886837	954812	4109385	transposase	Bacillus_phage(33.33%)	58	NA	NA
WP_023994644.1|886837_887854_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|888050_889034_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|890632_892021_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|892051_893041_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|893151_894384_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|894665_895466_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930017.1|898506_898953_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|898974_899721_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|899864_900842_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|901475_902087_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|902080_903298_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|903438_904389_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|904385_905105_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|905225_907385_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|907475_907745_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|907833_908040_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|908038_908566_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|908584_909364_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|909531_910548_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|910620_911112_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|911122_912838_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|914001_914952_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248601.1|914948_916799_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|917179_917839_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930053.1|917926_918079_+	vir-repressed protein	NA	NA	NA	NA	NA
WP_003809770.1|918187_918355_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930054.1|918366_919047_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|919328_920045_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|920059_921361_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|923505_926394_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|926617_927970_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|927998_928520_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|928516_929971_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|930005_930254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|930359_931235_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|931260_932316_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|932328_933120_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|933152_934523_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_023995501.1|935575_935713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|935699_936650_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|936702_936924_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|937083_937296_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|937415_938534_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|938630_938846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|939039_939291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|939403_940354_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|940350_940734_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930067.1|940788_942606_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|942752_943580_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|943625_944606_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|944602_944815_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|944811_945993_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|946156_946891_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|946892_949505_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|949640_951554_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|952169_952580_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|952677_953763_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|953861_954812_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	1037959	1087889	4109385	holin,tRNA,transposase	uncultured_Mediterranean_phage(37.5%)	41	NA	NA
WP_023853531.1|1037959_1039093_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994624.1|1039185_1039338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1039369_1039918_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_003819814.1|1039936_1040422_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1040599_1041538_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1041540_1041858_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1041903_1042848_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1044528_1045179_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_010930142.1|1045563_1046424_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1046440_1046722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811933.1|1048541_1049279_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1049714_1050038_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_019247393.1|1052644_1052938_+	response regulator	NA	NA	NA	NA	NA
WP_101645873.1|1052964_1055022_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1055036_1055537_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1055610_1057317_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1058180_1059233_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1059285_1059675_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1059683_1060316_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1060415_1061432_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1062262_1063270_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1063266_1064910_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_023995116.1|1064906_1065809_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1065934_1066408_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1066397_1067420_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1067416_1068844_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1069781_1070798_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1071130_1072066_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1072115_1073996_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1074062_1074407_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1074551_1075688_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1075684_1076758_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1076915_1078352_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1078442_1079084_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1079419_1080436_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_077068988.1|1082312_1082492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1082478_1083429_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930160.1|1084631_1086053_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1086316_1087033_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1087117_1087435_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1087475_1087889_+|holin	phage holin family protein	holin	NA	NA	NA	NA
>prophage 11
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	1096957	1178233	4109385	tRNA,transposase	Planktothrix_phage(16.67%)	59	NA	NA
WP_005013747.1|1096957_1097908_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930167.1|1098275_1099052_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1099096_1099954_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1099975_1100992_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1101126_1102167_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1102361_1104443_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1104678_1106172_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1106402_1107197_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1107417_1108776_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1108772_1109615_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1109633_1111520_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930175.1|1111757_1112390_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1112408_1113011_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_023995509.1|1113014_1113176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930177.1|1114914_1115715_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812707.1|1115758_1116745_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1116884_1117898_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1117894_1118845_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812703.1|1118957_1119416_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1119452_1120766_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1120783_1121155_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1121151_1122615_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_003812697.1|1122707_1123484_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_076879621.1|1123465_1126345_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1126527_1127478_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1127645_1128470_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1128469_1129348_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1130252_1131368_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930187.1|1131375_1132191_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
WP_010930188.1|1132187_1134053_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1134131_1134764_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1134760_1135063_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1135105_1136626_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010926447.1|1136632_1137388_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010926448.1|1137417_1138522_-	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010930191.1|1138624_1140325_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010930192.1|1140306_1141284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247537.1|1141293_1142574_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003812422.1|1142566_1143262_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_010928340.1|1143295_1144123_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930194.1|1144404_1147635_+	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010930195.1|1147903_1148080_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930196.1|1148370_1152297_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_023853221.1|1154196_1155993_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248398.1|1155992_1156961_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816844.1|1157030_1157876_+	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_003812405.1|1157943_1158498_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010930198.1|1158544_1159495_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930199.1|1159593_1160226_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010930200.1|1160390_1162673_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1162827_1165524_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1165649_1166138_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1168548_1171419_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1171464_1172679_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1172908_1174336_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_019248962.1|1174376_1175525_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1175537_1176296_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1176383_1177286_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1177282_1178233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	1217779	1299687	4109385	tRNA,transposase	Bacillus_virus(28.57%)	59	NA	NA
WP_076879566.1|1217779_1218730_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|1218816_1219767_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879546.1|1220699_1221050_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931069.1|1220973_1222002_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931068.1|1222081_1223380_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003816847.1|1223376_1223958_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931067.1|1224270_1228317_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_005012067.1|1236214_1237165_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931065.1|1238304_1238778_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931064.1|1238917_1239538_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931063.1|1239673_1240474_+	aldolase	NA	NA	NA	NA	NA
WP_003810897.1|1240528_1241620_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931062.1|1241641_1242085_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_010931061.1|1242113_1242746_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_003810909.1|1242856_1243273_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931060.1|1243265_1243958_+	DUF2238 domain-containing protein	NA	NA	NA	NA	NA
WP_010931059.1|1244064_1244439_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931058.1|1244515_1245325_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931057.1|1245420_1246365_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_003816577.1|1246403_1247375_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003810921.1|1247465_1247903_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443733.1|1247961_1248843_-	NRDE family protein	NA	NA	NA	NA	NA
WP_010931054.1|1249846_1250707_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931053.1|1250739_1252122_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	28.4	7.9e-30
WP_010931052.1|1252118_1253138_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247407.1|1253510_1254005_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931051.1|1254012_1254753_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931050.1|1254833_1256438_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_019248319.1|1256477_1257287_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.4	1.6e-22
WP_023995127.1|1257391_1259557_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	1.9e-14
WP_010931047.1|1260437_1261250_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_004568502.1|1261262_1261571_+	DUF2160 domain-containing protein	NA	NA	NA	NA	NA
WP_010931046.1|1261688_1263419_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019249399.1|1263420_1264566_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931044.1|1264695_1265364_-	DUF502 domain-containing protein	NA	NA	NA	NA	NA
WP_003810957.1|1265485_1265953_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247521.1|1266088_1267471_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_014486086.1|1267467_1268592_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_005013747.1|1271639_1272590_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1276336_1276948_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1277170_1278631_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1278727_1280320_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_076879563.1|1280306_1280585_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931039.1|1280643_1280931_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1280932_1282273_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1282368_1283058_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1283070_1284501_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1286225_1287047_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1287057_1288629_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1288657_1289635_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1289661_1290465_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1290461_1291256_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1291263_1292499_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1292491_1292926_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1293674_1294625_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1295246_1296974_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1297085_1298444_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_076879564.1|1298564_1298750_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1298736_1299687_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	1419077	1471229	4109385	tRNA,transposase	Salmonella_phage(25.0%)	46	NA	NA
WP_005013747.1|1419077_1420028_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219858.1|1420014_1420182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814065.1|1420194_1420548_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1420560_1420923_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1420964_1421390_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1421592_1422849_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1423047_1424028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1424177_1425419_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1425517_1426468_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1426476_1427172_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1429992_1430592_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1430602_1432768_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1432791_1434576_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1434575_1434665_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1435359_1435632_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1435631_1437698_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1437694_1438645_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1438743_1439694_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1439809_1440142_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1440138_1440825_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930948.1|1440811_1441771_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_003814032.1|1441812_1444173_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1444172_1444805_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_003814028.1|1444867_1446247_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1446293_1447649_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_003814025.1|1447927_1448176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1448363_1448681_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1448953_1449469_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814022.1|1449562_1449724_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|1449739_1450495_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1450833_1451040_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1451047_1451707_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1452001_1454206_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1454316_1455540_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1455662_1456637_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1456704_1457898_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1457912_1458713_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1458709_1460566_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1460562_1461168_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1461186_1462572_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1463297_1464524_+	transporter	NA	NA	NA	NA	NA
WP_003814011.1|1464612_1465395_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1465493_1466444_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1466470_1467244_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1467255_1468497_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1470278_1471229_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	1516911	1583238	4109385	transposase	Streptococcus_virus(11.11%)	58	NA	NA
WP_005012067.1|1516911_1517862_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1517868_1518981_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1519667_1520870_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1521073_1523734_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1523746_1527151_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1527817_1530043_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1530089_1530416_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1530466_1531075_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1531173_1532124_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1532193_1532958_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1532954_1533554_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820094.1|1533657_1534503_-	putative membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1534568_1535195_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1535191_1536142_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068977.1|1536128_1536317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930428.1|1536240_1537362_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1537342_1538344_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1538449_1539961_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1539957_1541262_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1541373_1541934_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1542201_1542756_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1543211_1543427_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1543681_1546279_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1546275_1547463_+	cupin	NA	NA	NA	NA	NA
WP_010930436.1|1548120_1548735_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930437.1|1548823_1549951_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1549962_1550868_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_023994753.1|1551618_1551774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1551760_1552711_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1552892_1553645_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1553713_1554373_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1554369_1555098_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1555110_1557390_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1557414_1557618_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_003811129.1|1557659_1558307_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	3.1e-13
WP_010930443.1|1558427_1559345_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1559341_1560055_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1560292_1561063_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1561067_1561667_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1561911_1563402_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1563460_1563745_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010928840.1|1563741_1563870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930445.1|1563882_1564038_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1564310_1565237_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1565373_1566114_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1566280_1567657_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1567838_1568744_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1570395_1572198_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1572315_1572966_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1573064_1574015_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1574036_1575257_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1575442_1576855_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1576918_1577986_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811170.1|1577982_1579473_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1579482_1580427_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1580586_1581285_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1581362_1582268_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1582287_1583238_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	1619186	1674776	4109385	transposase	Brazilian_cedratvirus(25.0%)	49	NA	NA
WP_005013747.1|1619186_1620137_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1620195_1620969_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1620961_1622518_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1622514_1623465_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219857.1|1623451_1623607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810741.1|1624791_1625394_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1625633_1626335_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1626328_1627111_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1627295_1628246_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302777.1|1628232_1628394_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930483.1|1628344_1629082_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1629271_1630030_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1630076_1631066_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1631243_1632212_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1633751_1634720_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1634728_1635670_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1636143_1637154_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1637144_1638659_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1638655_1640002_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1640004_1641039_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1641088_1642714_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1643266_1644217_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1644321_1645269_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1645322_1647137_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1647129_1647804_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1647933_1651008_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1651021_1651321_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1651635_1652259_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|1652502_1653372_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1653349_1654294_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930495.1|1654379_1655351_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930496.1|1655418_1656192_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1656188_1657385_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1657415_1658366_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1658587_1659277_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1659341_1660097_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1660148_1661141_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1661150_1662104_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1662219_1663182_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1664583_1665012_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1665008_1665959_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1666252_1666975_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1667413_1668601_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1668604_1668985_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1670703_1671675_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1671688_1672402_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1672406_1673324_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1673430_1673727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1673825_1674776_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	1834624	1892856	4109385	tRNA,transposase,protease	Klosneuvirus(40.0%)	50	NA	NA
WP_005012067.1|1834624_1835575_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|1835672_1836623_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|1837896_1839114_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|1840170_1841073_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|1841149_1842022_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|1842152_1842521_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|1842578_1843625_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|1843820_1845077_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|1845081_1846419_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|1846568_1847525_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|1847627_1848560_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|1848675_1848996_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930580.1|1848997_1849348_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|1849395_1850970_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|1851022_1851967_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|1851984_1852815_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|1852807_1854442_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|1854438_1855794_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|1856700_1858278_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|1858281_1859556_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|1859653_1860028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|1861743_1862877_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|1862914_1863520_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|1863516_1864335_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|1864406_1867031_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|1867017_1867272_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|1867338_1867920_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|1868223_1868484_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|1868649_1869273_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|1869272_1870046_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|1870042_1871251_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|1871276_1871750_-	RidA family protein	NA	NA	NA	NA	NA
WP_010930048.1|1871823_1872774_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|1872872_1873823_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|1873920_1875270_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|1876035_1876791_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|1876883_1879766_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|1880088_1880514_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|1880541_1881690_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|1881686_1882193_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930793.1|1882199_1883495_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_010930792.1|1883535_1884840_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|1884841_1885480_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003810701.1|1885482_1886643_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|1886669_1888025_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|1888028_1889099_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|1889237_1889474_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|1889561_1890668_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|1890633_1891938_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|1891956_1892856_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 17
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	1903096	1947418	4109385	transposase	Staphylococcus_phage(25.0%)	45	NA	NA
WP_005013747.1|1903096_1904047_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1904145_1905096_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879573.1|1905082_1905283_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930782.1|1905295_1906381_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|1906396_1907158_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930781.1|1907154_1908078_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
WP_019248115.1|1908176_1908701_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|1908709_1909453_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|1909548_1909788_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|1909801_1909954_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|1910039_1911530_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|1911621_1912560_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|1912556_1912733_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|1912735_1913398_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|1915019_1915163_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|1915159_1916134_-	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1916299_1917250_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|1917246_1918521_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_076879572.1|1918618_1919818_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|1919814_1920468_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|1920464_1921901_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|1921888_1922248_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_005012067.1|1923220_1924171_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930768.1|1925216_1927082_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|1927339_1928860_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|1928947_1929598_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930766.1|1930546_1931842_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|1931863_1932748_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|1932846_1933722_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|1933711_1934068_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_076879571.1|1934141_1935173_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|1935302_1935482_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|1935579_1936104_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|1936114_1936951_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|1937063_1937435_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|1937431_1937983_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|1937998_1939690_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|1939738_1940419_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|1940666_1941131_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|1941300_1942230_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|1942242_1942890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|1942963_1944781_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|1944864_1945815_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154299520.1|1946319_1946481_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929577.1|1946467_1947418_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	1977191	2041559	4109385	transposase	Vibrio_phage(20.0%)	52	NA	NA
WP_005013747.1|1977191_1978142_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068978.1|1978128_1978320_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005015810.1|1978363_1979314_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852887.1|1979412_1980378_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930740.1|1980515_1981415_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930739.1|1984009_1985497_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_014486081.1|1985507_1986704_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_003816680.1|1986776_1988096_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010930737.1|1988092_1988968_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443721.1|1988998_1990168_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930735.1|1990164_1990479_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_062810228.1|1990500_1991223_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003816690.1|1991222_1992041_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816691.1|1992045_1992573_-	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_029443722.1|1992578_1993844_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930732.1|1994193_1995333_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930731.1|1995410_1996283_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930730.1|1997153_1998104_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930729.1|1998063_1998699_-	membrane protein	NA	NA	NA	NA	NA
WP_010930728.1|1999058_2000381_-	isocitrate lyase	NA	NA	NA	NA	NA
WP_015041331.1|2000609_2001521_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	5.9e-42
WP_003810356.1|2002945_2003518_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930726.1|2003557_2005387_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_010930725.1|2005349_2006408_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930724.1|2006445_2006907_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_003810344.1|2006991_2007738_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_019247651.1|2009228_2012459_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_019248531.1|2012525_2013857_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930721.1|2014109_2014484_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2014586_2015765_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_003810329.1|2015775_2016366_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003818535.1|2016476_2017283_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930719.1|2017308_2018103_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_010930718.1|2019103_2020078_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2020236_2020749_-	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_003818532.1|2020905_2021877_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930717.1|2023621_2024428_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023996008.1|2024424_2025561_-	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930715.1|2025676_2026441_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_101645877.1|2026554_2027283_-	spermidine synthase	NA	NA	NA	NA	NA
WP_076879569.1|2027408_2028620_-	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_003818524.1|2028668_2029043_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_003810308.1|2029143_2030406_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003810306.1|2030402_2031260_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003818523.1|2031432_2032434_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2032885_2033836_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930712.1|2035351_2036551_+	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_003810297.1|2036919_2037156_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930711.1|2037219_2037387_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_023853105.1|2037500_2039396_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
WP_062826579.1|2039559_2040510_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|2040608_2041559_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	2173085	2222738	4109385	tRNA,transposase	Synechococcus_phage(14.29%)	45	NA	NA
WP_005012067.1|2173085_2174036_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2174134_2176129_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2176188_2177154_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2177143_2180005_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2180007_2180514_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2180618_2181827_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2181828_2182767_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2182928_2183402_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2183398_2184349_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879558.1|2184335_2184515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004566334.1|2184459_2184900_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2185028_2186258_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2186296_2187118_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2187171_2188323_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2188414_2188903_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_010930534.1|2191429_2194003_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2194073_2196647_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2196912_2197113_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2197144_2197306_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2197363_2197702_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2197850_2198801_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274081.1|2198899_2199619_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.6	1.4e-22
WP_029443816.1|2199695_2200244_+	arylesterase	NA	NA	NA	NA	NA
WP_019247881.1|2200225_2202241_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_004568486.1|2202423_2203173_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_003816518.1|2203185_2204049_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_003816520.1|2204052_2205468_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_010930530.1|2205601_2206330_-	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003811035.1|2206468_2206669_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_003816523.1|2206844_2207243_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003816525.1|2207266_2208667_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_010930529.1|2208785_2209538_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003816527.1|2209826_2210504_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248494.1|2210530_2211310_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003811022.1|2211306_2212191_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_077274094.1|2212208_2212898_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.2e-32
WP_010930526.1|2212972_2213731_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_003811015.1|2213856_2214504_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010929632.1|2214771_2215788_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930524.1|2215885_2216926_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_003811011.1|2217060_2218353_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_003811007.1|2219712_2220096_+	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_010930523.1|2220113_2220701_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_005012067.1|2220738_2221689_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2221787_2222738_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	2579560	2646059	4109385	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2579560_2580511_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2580880_2581453_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2581455_2582466_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2582458_2582959_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2582969_2583311_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_015041547.1|2583322_2584114_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2584130_2584400_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2584422_2585211_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010930525.1|2585257_2586274_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2586490_2587933_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2588111_2589731_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2589851_2591672_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2591750_2593283_-	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
WP_010930329.1|2593316_2594963_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2595032_2596055_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2596072_2597206_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2597208_2597898_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2597897_2598683_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2598726_2599491_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2599529_2600951_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2601016_2601721_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2601768_2602188_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2602200_2602608_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2602791_2603502_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2603628_2603919_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2603936_2604419_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2608924_2610079_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2610384_2611401_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2611647_2612436_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2612502_2613183_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2613179_2613950_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2614047_2614998_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2615053_2615971_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2615981_2617160_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2617179_2618175_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2619763_2620372_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2620359_2621400_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2621417_2622380_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2622376_2623570_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2623566_2624364_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2624389_2625376_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2625394_2627434_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
WP_010930315.1|2627635_2628316_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2628329_2629241_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2629237_2629816_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2629954_2630860_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2630867_2634287_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2634274_2636875_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2637830_2638463_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2638856_2639615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811370.1|2639611_2640814_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2641001_2641952_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2642859_2644005_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930309.1|2644024_2644747_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2644863_2645043_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2645108_2646059_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	2674171	2711582	4109385	transposase	Planktothrix_phage(33.33%)	40	NA	NA
WP_005012067.1|2674171_2675122_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2675220_2676171_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811316.1|2676263_2676803_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_023852799.1|2676909_2677254_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_010930298.1|2677311_2678760_-	CoA transferase	NA	NA	NA	NA	NA
WP_003811313.1|2678947_2679283_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930297.1|2680910_2682089_+	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811310.1|2682171_2682672_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_077274085.1|2682697_2683483_+	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_010930295.1|2683494_2683959_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003811307.1|2683955_2684249_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811306.1|2684245_2685022_+	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_010930294.1|2685050_2685878_+	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_010930293.1|2686003_2686474_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811301.1|2686600_2687494_+	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930292.1|2687541_2688723_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811298.1|2688735_2689551_-	exported protein	NA	NA	NA	NA	NA
WP_010930291.1|2689684_2690212_-	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811295.1|2690208_2690706_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_003811293.1|2690853_2691231_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_010929584.1|2691452_2692403_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811244.1|2692501_2693113_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930290.1|2693347_2694475_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930289.1|2694585_2695674_-	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_003811259.1|2695726_2696578_-	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_003811262.1|2696597_2697479_-	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_010930288.1|2697655_2698969_-	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811267.1|2699179_2700013_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930287.1|2700009_2700591_+	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_124740682.1|2700715_2700958_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015810.1|2700944_2701895_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930286.1|2701910_2703026_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811272.1|2703128_2704055_+	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930285.1|2704054_2705293_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811277.1|2705289_2706057_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930284.1|2706057_2706759_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_019247793.1|2706840_2707287_-	glutamate racemase	NA	NA	NA	NA	NA
WP_010930283.1|2708176_2708815_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_005012808.1|2709582_2710533_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|2710631_2711582_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	2841919	2907752	4109385	transposase,protease	Pelagibacter_phage(16.67%)	46	NA	NA
WP_005012067.1|2841919_2842870_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2843004_2844111_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2844121_2845219_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2845363_2846569_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2846575_2847097_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_010931089.1|2847093_2847585_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2847581_2847833_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2847813_2848299_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2848434_2851896_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_076879578.1|2851892_2852798_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2852807_2853239_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2853485_2853989_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_023995849.1|2854000_2855467_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2855541_2856417_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2856413_2857421_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2857888_2858194_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2858284_2858875_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|2860272_2862609_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_003812014.1|2862691_2863126_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|2864272_2865223_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2865219_2866014_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2866045_2866750_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2866824_2867625_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2867621_2868029_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2868025_2868667_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_019247695.1|2868659_2870681_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2871920_2873252_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2873248_2874199_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2875905_2876172_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2876879_2877218_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2881770_2882373_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2882469_2883759_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2883816_2884548_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2884544_2885348_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2885344_2886433_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2886429_2887359_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2887507_2888653_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2888674_2889625_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931110.1|2889955_2893777_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2893933_2894602_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2894606_2896280_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2896298_2897618_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_023995053.1|2897622_2899974_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
WP_010931115.1|2899993_2902162_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931116.1|2902158_2907348_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2907437_2907752_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
>prophage 23
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	2913982	2973315	4109385	transposase	Burkholderia_phage(25.0%)	55	NA	NA
WP_005012067.1|2913982_2914933_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2915213_2915834_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2915830_2916244_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2916240_2917284_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2917339_2917528_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2917537_2918302_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2918392_2919049_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2919140_2919899_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2919924_2921526_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2921726_2922731_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2922831_2923095_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2923212_2923989_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2924579_2925530_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2927913_2929026_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2929082_2930033_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994668.1|2930019_2930166_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003813070.1|2930241_2930463_-	YgdI/YgdR family lipoprotein	NA	NA	NA	NA	NA
WP_010931131.1|2930676_2932083_-	threonine synthase	NA	NA	NA	NA	NA
WP_003813074.1|2932079_2933384_-	homoserine dehydrogenase	NA	NA	NA	NA	NA
WP_003813076.1|2933380_2934688_-	alanine transaminase	NA	NA	NA	NA	NA
WP_003813077.1|2934784_2935237_+	Xcc1710-like domain-containing protein	NA	NA	NA	NA	NA
WP_003813079.1|2935239_2935704_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_003813085.1|2937566_2938544_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
WP_010931134.1|2938623_2939592_+	bile acid:sodium symporter	NA	NA	NA	NA	NA
WP_003813089.1|2939612_2940986_-	replicative DNA helicase	NA	C7BGG1	Burkholderia_phage	58.2	4.0e-135
WP_003813091.1|2940982_2941819_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931135.1|2941935_2942391_-	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_003813094.1|2942406_2942679_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_003813095.1|2942771_2943095_-	primosomal replication protein N	NA	NA	NA	NA	NA
WP_010926331.1|2943142_2943523_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_003813103.1|2943742_2944540_-	GTP cyclohydrolase I FolE2	NA	NA	NA	NA	NA
WP_010931136.1|2944696_2946559_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_003820295.1|2946608_2947520_-	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_003813109.1|2947524_2947791_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_033446289.1|2947877_2948708_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931138.1|2948882_2949848_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813114.1|2950018_2951029_+	acyltransferase family protein	NA	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	24.6	3.6e-16
WP_076879579.1|2951035_2952328_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
WP_023996438.1|2953261_2953420_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814555.1|2953470_2954943_-	magnesium transporter	NA	NA	NA	NA	NA
WP_003814554.1|2954953_2955364_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_010929220.1|2955427_2956474_-	YeiH family putative sulfate export transporter	NA	NA	NA	NA	NA
WP_003814552.1|2956580_2957459_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931140.1|2957472_2958669_-	amidohydrolase	NA	NA	NA	NA	NA
WP_010931141.1|2958730_2960422_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	28.1	9.4e-33
WP_005012067.1|2960418_2961369_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879632.1|2961355_2961601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|2961489_2962386_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2964663_2966889_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2967053_2968142_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2968098_2968752_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2968799_2969597_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2970128_2971079_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2971159_2972308_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2972364_2973315_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	2983090	3035693	4109385	transposase	Ostreococcus_lucimarinus_virus(16.67%)	47	NA	NA
WP_023852748.1|2983090_2984329_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2984370_2985633_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2985639_2986392_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2986443_2986629_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2986904_2987369_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2987400_2988060_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2988204_2990313_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2990309_2991260_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2991363_2991984_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|2992087_2992828_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2993962_2995087_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2995132_2995501_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2995742_2996693_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2997728_2998271_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740747.1|2998463_2998670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2998656_2999607_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997028.1|2999603_3000569_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|3000638_3001475_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_076879583.1|3001951_3003097_+	porin	NA	NA	NA	NA	NA
WP_010931159.1|3004300_3005083_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931160.1|3005096_3005846_-	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931161.1|3005873_3007220_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931162.1|3007245_3008175_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003819549.1|3008290_3009196_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931163.1|3009213_3010413_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010931164.1|3010485_3011178_-	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931165.1|3011226_3013653_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_003809026.1|3014863_3015232_-	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_003809025.1|3015518_3016445_+	VOC family protein	NA	NA	NA	NA	NA
WP_010931167.1|3016488_3017499_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_010931168.1|3017495_3017930_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931169.1|3019055_3019844_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931170.1|3019853_3020636_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931171.1|3020639_3021731_-	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931172.1|3021836_3023312_+	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931173.1|3023453_3024002_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809010.1|3024017_3024479_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931174.1|3024579_3025569_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931175.1|3025867_3026569_+	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931176.1|3026607_3027981_-	amidase	NA	NA	NA	NA	NA
WP_023997744.1|3028019_3029306_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931177.1|3030192_3031095_+	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_010931178.1|3031042_3032263_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931179.1|3032259_3032769_-	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010926062.1|3032758_3033454_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931181.1|3033524_3034394_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930208.1|3034742_3035693_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	3404957	3450028	4109385	tRNA,transposase	Staphylococcus_phage(20.0%)	39	NA	NA
WP_005012067.1|3404957_3405908_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302791.1|3405894_3406071_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931344.1|3406674_3407769_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3407761_3409096_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3409049_3409733_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_024000003.1|3409758_3410922_-	acyl-CoA dehydrogenase C-terminal domain protein	NA	NA	NA	NA	NA
WP_004566224.1|3410918_3411920_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3411919_3412792_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3412788_3413538_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3413534_3414326_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3414322_3415462_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_033446332.1|3415770_3416523_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3416556_3417339_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3417342_3417732_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3418871_3419735_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3419770_3420859_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3420855_3421806_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_080501793.1|3421792_3422206_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247959.1|3422159_3425138_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3426064_3426943_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3428890_3429841_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3429837_3430305_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3430347_3431118_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3431138_3431939_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3431949_3433359_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3433453_3434239_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3434478_3435495_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3435602_3435995_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3436132_3436813_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_010931358.1|3436817_3437816_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3437884_3438835_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814239.1|3440339_3441041_+	response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
WP_010927010.1|3441040_3442465_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_010931361.1|3443534_3444875_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003820957.1|3444990_3446754_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3446865_3447744_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3447856_3448672_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3448675_3448927_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3449011_3450028_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	3467772	3520177	4109385	tRNA,transposase	Acinetobacter_phage(37.5%)	47	NA	NA
WP_010931363.1|3467772_3468789_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3468884_3469595_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3469591_3470581_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023852728.1|3470712_3472308_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3472310_3473048_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3473203_3474076_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_003814298.1|3474344_3475565_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3475561_3476221_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3476292_3476925_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3476954_3477473_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3477483_3478593_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3478639_3479494_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3479495_3480398_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3481620_3482571_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3484325_3485315_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3485490_3486279_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3486275_3487307_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3487325_3487889_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3487944_3489465_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3489728_3490433_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_003815384.1|3490440_3491178_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3491283_3491658_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3491700_3492990_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3492986_3494156_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3494152_3494992_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3495051_3495987_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3495999_3496950_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3497048_3498011_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3498042_3498402_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3498526_3499429_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3499430_3501203_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3501237_3502014_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3503337_3504288_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815365.1|3505139_3505460_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003815364.1|3505532_3506414_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003815363.1|3506530_3506773_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_010931385.1|3506910_3507381_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003815348.1|3507393_3507933_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_010931386.1|3507967_3509509_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003817813.1|3509607_3510513_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_010931387.1|3510555_3511956_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003815341.1|3511965_3512388_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_010931388.1|3512570_3513455_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931389.1|3513530_3514607_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_019247688.1|3514913_3517016_+	primosomal protein N'	NA	NA	NA	NA	NA
WP_010931391.1|3517058_3519128_+	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
WP_005012808.1|3519226_3520177_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP018042	Bordetella pertussis strain J313 chromosome, complete genome	4109385	3537294	3590046	4109385	tRNA,transposase	Catovirus(11.11%)	45	NA	NA
WP_010931400.1|3537294_3538245_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3538585_3539536_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3539634_3540585_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3540881_3541379_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3541421_3543197_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_076879643.1|3543243_3544071_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3544077_3544812_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3545981_3546776_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3547065_3547656_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3547689_3549018_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3549092_3550238_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3550349_3551348_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3551310_3551745_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3553261_3554146_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3554142_3555348_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3555344_3556205_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3556317_3558108_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_003807035.1|3558148_3558814_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_010929971.1|3558814_3559123_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3559288_3560575_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3562008_3562959_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3564910_3566125_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3566230_3567220_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3567216_3567825_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3567837_3568467_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3568463_3569084_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3569115_3569907_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_003815179.1|3570749_3571214_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3571232_3572159_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3572212_3573499_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3574429_3575302_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3575298_3576249_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3576347_3577298_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_020699695.1|3577402_3577633_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247263.1|3577759_3578149_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010929962.1|3578165_3580547_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_023853194.1|3580539_3581916_-	FAD binding domain in molybdopterin dehydrogenase	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
WP_010929960.1|3581931_3582927_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003819054.1|3582945_3583938_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807624.1|3584178_3584739_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_010929959.1|3584743_3585070_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_010929958.1|3585106_3585919_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_003807618.1|3585929_3587012_-	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
WP_010929957.1|3587098_3588373_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_010929956.1|3589095_3590046_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
