assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002853655.1_ASM285365v1	NZ_CP024134	Escherichia coli strain 14EC017 chromosome, complete genome	1	1033834-1034227	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	Unclear	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	NA|47aa|up_1|NZ_CP024134.1_1032543_1032684_-,NA	NA|919aa|up_9|NZ_CP024134.1_1020427_1023184_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|434aa|up_8|NZ_CP024134.1_1023240_1024542_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_7|NZ_CP024134.1_1024589_1026824_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_6|NZ_CP024134.1_1026901_1027150_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_5|NZ_CP024134.1_1027149_1027485_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_4|NZ_CP024134.1_1027555_1028347_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|NZ_CP024134.1_1028574_1030212_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|NZ_CP024134.1_1030299_1031598_+	PRK00077, eno, enolase; Provisional	NA|47aa|up_1|NZ_CP024134.1_1032543_1032684_-	NA	NA|224aa|up_0|NZ_CP024134.1_1032822_1033494_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP024134.1_1034866_1036345_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP024134.1_1036371_1037649_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP024134.1_1037967_1038753_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP024134.1_1038822_1040277_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_4|NZ_CP024134.1_1040370_1041708_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP024134.1_1041685_1042465_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP024134.1_1042461_1043322_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP024134.1_1043469_1044045_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP024134.1_1044061_1044322_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP024134.1_1044312_1045584_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_002853655.1_ASM285365v1	NZ_CP024134	Escherichia coli strain 14EC017 chromosome, complete genome	2	1059777-1060659	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	Type I-E	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	12,14,14	14	TypeI-E	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	NA,NA	NA|571aa|up_9|NZ_CP024134.1_1048141_1049854_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP024134.1_1049927_1050662_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|889aa|up_7|NZ_CP024134.1_1051020_1053687_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|503aa|up_6|NZ_CP024134.1_1054101_1055610_+	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cse2gr11|161aa|up_5|NZ_CP024134.1_1055602_1056085_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|364aa|up_4|NZ_CP024134.1_1056097_1057189_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|225aa|up_3|NZ_CP024134.1_1057191_1057866_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|200aa|up_2|NZ_CP024134.1_1057852_1058452_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|306aa|up_1|NZ_CP024134.1_1058467_1059385_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|NZ_CP024134.1_1059386_1059671_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP024134.1_1060679_1061717_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP024134.1_1061968_1062877_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP024134.1_1062878_1064306_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP024134.1_1064305_1064911_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP024134.1_1064960_1065284_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP024134.1_1065477_1065789_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP024134.1_1065807_1066518_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP024134.1_1066517_1066997_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP024134.1_1066993_1068043_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP024134.1_1068023_1068785_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_002853655.1_ASM285365v1	NZ_CP024134	Escherichia coli strain 14EC017 chromosome, complete genome	3	1638230-1638347	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	NA,NA	NA|62aa|up_9|NZ_CP024134.1_1627515_1627701_-	PRK09956, PRK09956, ISNCY family transposase	NA|300aa|up_8|NZ_CP024134.1_1627713_1628613_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|NZ_CP024134.1_1628805_1629996_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|NZ_CP024134.1_1629992_1631252_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|NZ_CP024134.1_1631241_1632870_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_4|NZ_CP024134.1_1633142_1634501_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|NZ_CP024134.1_1634505_1635582_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|NZ_CP024134.1_1636044_1636695_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP024134.1_1636748_1637003_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP024134.1_1637002_1638133_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP024134.1_1638366_1640652_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP024134.1_1641347_1645100_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP024134.1_1645227_1645950_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP024134.1_1646096_1648724_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP024134.1_1648872_1650561_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP024134.1_1650557_1651181_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP024134.1_1651324_1655719_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|NZ_CP024134.1_1655719_1657369_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|NZ_CP024134.1_1657373_1658150_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|371aa|down_9|NZ_CP024134.1_1658617_1659730_+	pfam01609, DDE_Tnp_1, Transposase DDE domain
GCF_002853655.1_ASM285365v1	NZ_CP024134	Escherichia coli strain 14EC017 chromosome, complete genome	4	2277901-2278024	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	NA,NA|30aa|down_7|NZ_CP024134.1_2286920_2287010_+	NA|471aa|up_9|NZ_CP024134.1_2267354_2268767_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP024134.1_2269323_2269533_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP024134.1_2269988_2270615_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP024134.1_2270635_2272738_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP024134.1_2272741_2273389_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP024134.1_2273452_2274121_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP024134.1_2274117_2274903_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP024134.1_2274906_2275719_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP024134.1_2275730_2277335_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP024134.1_2277460_2277766_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP024134.1_2278338_2279595_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP024134.1_2279635_2281009_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP024134.1_2281223_2281865_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP024134.1_2281904_2283053_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP024134.1_2283343_2284555_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP024134.1_2284667_2285600_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP024134.1_2285596_2286622_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP024134.1_2286920_2287010_+	NA	NA|390aa|down_8|NZ_CP024134.1_2287175_2288345_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP024134.1_2288579_2289161_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_002853655.1_ASM285365v1	NZ_CP024134	Escherichia coli strain 14EC017 chromosome, complete genome	5	3236038-3236129	5	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	NA|70aa|up_9|NZ_CP024134.1_3225113_3225323_-,NA	NA|70aa|up_9|NZ_CP024134.1_3225113_3225323_-	NA	NA|1321aa|up_8|NZ_CP024134.1_3225377_3229340_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP024134.1_3229379_3230018_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP024134.1_3230305_3231397_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP024134.1_3231396_3232089_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP024134.1_3232100_3232487_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP024134.1_3232494_3233295_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP024134.1_3233304_3233895_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP024134.1_3233905_3234400_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP024134.1_3234420_3235749_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP024134.1_3236552_3237149_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP024134.1_3237169_3237397_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP024134.1_3237434_3238676_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|307aa|down_3|NZ_CP024134.1_3240484_3241405_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_4|NZ_CP024134.1_3241404_3241710_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_5|NZ_CP024134.1_3241861_3242461_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_6|NZ_CP024134.1_3242457_3245004_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_7|NZ_CP024134.1_3245003_3246176_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_8|NZ_CP024134.1_3246305_3246998_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|343aa|down_9|NZ_CP024134.1_3246970_3247999_-	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional
GCF_002853655.1_ASM285365v1	NZ_CP024134	Escherichia coli strain 14EC017 chromosome, complete genome	6	3547593-3547737	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	NA|251aa|up_7|NZ_CP024134.1_3542284_3543037_+,NA|72aa|up_6|NZ_CP024134.1_3543044_3543260_+,NA|201aa|up_4|NZ_CP024134.1_3543790_3544393_-,NA|56aa|up_3|NZ_CP024134.1_3544635_3544803_+,NA	NA|227aa|up_9|NZ_CP024134.1_3541452_3542133_+	pfam09588, YqaJ, YqaJ-like viral recombinase domain	NA|53aa|up_8|NZ_CP024134.1_3542129_3542288_+	pfam07026, DUF1317, Protein of unknown function (DUF1317)	NA|251aa|up_7|NZ_CP024134.1_3542284_3543037_+	NA	NA|72aa|up_6|NZ_CP024134.1_3543044_3543260_+	NA	NA|74aa|up_5|NZ_CP024134.1_3543358_3543580_+	PHA00080, PHA00080, DksA-like zinc finger domain containing protein	NA|201aa|up_4|NZ_CP024134.1_3543790_3544393_-	NA	NA|56aa|up_3|NZ_CP024134.1_3544635_3544803_+	NA	NA|73aa|up_2|NZ_CP024134.1_3544842_3545061_+	pfam07825, Exc, Excisionase-like protein	NA|357aa|up_1|NZ_CP024134.1_3545038_3546109_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|NZ_CP024134.1_3546243_3547527_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP024134.1_3547760_3550022_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP024134.1_3550204_3551638_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP024134.1_3551713_3552766_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP024134.1_3552949_3553903_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP024134.1_3553943_3554939_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP024134.1_3555093_3555912_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP024134.1_3555912_3556971_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP024134.1_3556973_3557663_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP024134.1_3557662_3558436_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP024134.1_3558601_3558751_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_002853655.1_ASM285365v1	NZ_CP024134	Escherichia coli strain 14EC017 chromosome, complete genome	7	3790922-3791018	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	NA,NA	NA|231aa|up_9|NZ_CP024134.1_3782717_3783410_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP024134.1_3783629_3784172_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP024134.1_3784642_3785509_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP024134.1_3785510_3785723_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP024134.1_3785830_3786352_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP024134.1_3786387_3787773_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP024134.1_3787946_3788441_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP024134.1_3788443_3789166_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP024134.1_3789283_3789793_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP024134.1_3789789_3790857_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP024134.1_3791051_3791945_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP024134.1_3791941_3792757_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP024134.1_3792767_3794027_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|232aa|down_3|NZ_CP024134.1_3795602_3796297_+	pfam03400, DDE_Tnp_IS1, IS1 transposase	NA|69aa|down_4|NZ_CP024134.1_3796271_3796478_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_5|NZ_CP024134.1_3796794_3797844_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|409aa|down_6|NZ_CP024134.1_3798651_3799878_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_7|NZ_CP024134.1_3799888_3800674_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_8|NZ_CP024134.1_3800901_3802047_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_9|NZ_CP024134.1_3802068_3803370_-	PRK11412, PRK11412, uracil/xanthine transporter
GCF_002853655.1_ASM285365v1	NZ_CP024134	Escherichia coli strain 14EC017 chromosome, complete genome	8	4296562-4296703	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	NA,NA	NA|96aa|up_9|NZ_CP024134.1_4285553_4285841_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_8|NZ_CP024134.1_4285837_4287124_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_7|NZ_CP024134.1_4287174_4288116_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_6|NZ_CP024134.1_4288130_4288901_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_5|NZ_CP024134.1_4289373_4290888_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_4|NZ_CP024134.1_4290918_4292061_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|NZ_CP024134.1_4292189_4293407_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|NZ_CP024134.1_4293480_4295034_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|NZ_CP024134.1_4295142_4295928_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|NZ_CP024134.1_4295933_4296524_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|NZ_CP024134.1_4296732_4297128_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_1|NZ_CP024134.1_4297389_4300611_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_2|NZ_CP024134.1_4300628_4301777_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_3|NZ_CP024134.1_4302232_4303054_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_4|NZ_CP024134.1_4303220_4304135_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_5|NZ_CP024134.1_4304200_4305151_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_6|NZ_CP024134.1_4305152_4305602_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_7|NZ_CP024134.1_4305726_4306221_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_8|NZ_CP024134.1_4306220_4309037_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|314aa|down_9|NZ_CP024134.1_4309079_4310021_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase
GCF_002853655.1_ASM285365v1	NZ_CP024136	Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence	1	79435-79554	1	CRISPRCasFinder	no	csa3	csa3	Type I-A	TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT,WYL	NA|63aa|up_2|NZ_CP024136.1_76156_76345_+,NA|149aa|down_2|NZ_CP024136.1_81512_81959_+,NA|118aa|down_3|NZ_CP024136.1_82095_82449_+,NA|28aa|down_8|NZ_CP024136.1_86470_86554_-	NA|129aa|up_9|NZ_CP024136.1_66220_66607_-	cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins	NA|235aa|up_8|NZ_CP024136.1_66746_67451_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|392aa|up_7|NZ_CP024136.1_67770_68946_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1051aa|up_6|NZ_CP024136.1_68969_72122_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|160aa|up_5|NZ_CP024136.1_72191_72671_-	pfam02082, Rrf2, Transcriptional regulator	NA|235aa|up_4|NZ_CP024136.1_72772_73477_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|265aa|up_3|NZ_CP024136.1_73783_74578_-	cd05150, APH, Aminoglycoside 3'-phosphotransferase	NA|63aa|up_2|NZ_CP024136.1_76156_76345_+	NA	NA|94aa|up_1|NZ_CP024136.1_78049_78331_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|84aa|up_0|NZ_CP024136.1_78320_78572_-	PRK02854, PRK02854, primosomal protein DnaT	NA|280aa|down_0|NZ_CP024136.1_79806_80646_+	pfam01051, Rep_3, Initiator Replication protein	NA|281aa|down_1|NZ_CP024136.1_80666_81509_+	pfam01051, Rep_3, Initiator Replication protein	NA|149aa|down_2|NZ_CP024136.1_81512_81959_+	NA	NA|118aa|down_3|NZ_CP024136.1_82095_82449_+	NA	NA|355aa|down_4|NZ_CP024136.1_82986_84051_-	pfam13614, AAA_31, AAA domain	NA|77aa|down_5|NZ_CP024136.1_84474_84705_-	pfam09274, ParG, ParG	NA|207aa|down_6|NZ_CP024136.1_84756_85377_-	cd02042, ParAB_family, partition proteins ParAB family	NA|215aa|down_7|NZ_CP024136.1_85671_86316_+	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme	NA|28aa|down_8|NZ_CP024136.1_86470_86554_-	NA	csa3|108aa|down_9|NZ_CP024136.1_87690_88014_-	pfam12840, HTH_20, Helix-turn-helix domain
