assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002849955.1_ASM284995v1	NZ_CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	1	746541-746631	1	CRISPRCasFinder	no		cas14j,cas3,csa3,cas2,cas14k,DEDDh,DinG,WYL,RT,Cas14u_CAS-V	Orphan	GTATTCTCCACGTATGTGGAGGTGATCCTA	30	0	0	NA	NA	I-B,III-A,III-B	1	1	Orphan	cas14j,cas3,csa3,cas2,cas14k,DEDDh,DinG,WYL,RT,Cas14u_CAS-V	NA|169aa|up_6|NZ_CP015498.1_734248_734755_-,NA|140aa|up_3|NZ_CP015498.1_739266_739686_-,NA|70aa|up_1|NZ_CP015498.1_741133_741343_-,NA|136aa|up_0|NZ_CP015498.1_744801_745209_-,NA|99aa|down_3|NZ_CP015498.1_750915_751212_+,NA|170aa|down_8|NZ_CP015498.1_754699_755209_+	NA|136aa|up_9|NZ_CP015498.1_729590_729998_+	pfam02566, OsmC, OsmC-like protein	NA|235aa|up_8|NZ_CP015498.1_730017_730722_+	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|426aa|up_7|NZ_CP015498.1_731695_732973_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|169aa|up_6|NZ_CP015498.1_734248_734755_-	NA	NA|484aa|up_5|NZ_CP015498.1_734935_736387_+	pfam13240, zinc_ribbon_2, zinc-ribbon domain	NA|393aa|up_4|NZ_CP015498.1_737865_739044_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|140aa|up_3|NZ_CP015498.1_739266_739686_-	NA	NA|393aa|up_2|NZ_CP015498.1_739916_741095_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|70aa|up_1|NZ_CP015498.1_741133_741343_-	NA	NA|136aa|up_0|NZ_CP015498.1_744801_745209_-	NA	NA|109aa|down_0|NZ_CP015498.1_748493_748820_-	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only]	NA|295aa|down_1|NZ_CP015498.1_748821_749706_-	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit	NA|221aa|down_2|NZ_CP015498.1_749720_750383_-	TIGR00719, Probable_L-serine_dehydratase_beta_chain, L-serine dehydratase, iron-sulfur-dependent, beta subunit	NA|99aa|down_3|NZ_CP015498.1_750915_751212_+	NA	NA|350aa|down_4|NZ_CP015498.1_751352_752402_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|390aa|down_5|NZ_CP015498.1_752606_753776_+	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters	NA|72aa|down_6|NZ_CP015498.1_754024_754240_+	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|116aa|down_7|NZ_CP015498.1_754312_754660_+	pfam03217, SLAP, SLAP domain	NA|170aa|down_8|NZ_CP015498.1_754699_755209_+	NA	NA|582aa|down_9|NZ_CP015498.1_755557_757303_+	cd08510, PBP2_Lactococcal_OppA_like, The substrate binding component of an ABC-type lactococcal OppA-like transport system contains
GCF_002849955.1_ASM284995v1	NZ_CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2	866027-866147	2	CRISPRCasFinder	no	DEDDh	cas14j,cas3,csa3,cas2,cas14k,DEDDh,DinG,WYL,RT,Cas14u_CAS-V	Unclear	AGAATCAGGCAGTCATTAAAAGGCTGTTTGGTTCTTTTTCT	41	1	17	866068-866106|866068-866106|866068-866106|866068-866106|866068-866106|866068-866106|866068-866106|866068-866106|866068-866106|866068-866106|866068-866106|866068-866106|866068-866106|866068-866106|866068-866106|866068-866106|866068-866106	NZ_CP015498.1_13065-13027|NZ_CP015498.1_28210-28248|NZ_CP015498.1_396215-396253|NZ_CP015498.1_458440-458478|NZ_CP015498.1_573897-573935|NZ_CP015498.1_635071-635109|NZ_CP015498.1_637106-637144|NZ_CP015498.1_733016-732978|NZ_CP015498.1_736432-736470|NZ_CP015498.1_765848-765886|NZ_CP015498.1_770931-770969|NZ_CP015498.1_1161551-1161513|NZ_CP015498.1_1166591-1166629|NZ_CP015498.1_1272301-1272263|NZ_CP015498.1_1652795-1652757|NZ_CP015498.1_2030446-2030408|NZ_CP015498.1_2049942-2049980	NA	1	1	Orphan	cas14j,cas3,csa3,cas2,cas14k,DEDDh,DinG,WYL,RT,Cas14u_CAS-V	NA,NA	NA|477aa|up_9|NZ_CP015498.1_859226_860657_+	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|91aa|up_8|NZ_CP015498.1_860748_861021_+	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed	NA|172aa|up_7|NZ_CP015498.1_861089_861605_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|240aa|up_6|NZ_CP015498.1_861594_862314_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|116aa|up_5|NZ_CP015498.1_862426_862774_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|220aa|up_4|NZ_CP015498.1_863162_863822_+	cd10030, UDG-F4_TTUDGA_SPO1dp_like, Uracil DNA glycosylase family 4, includes Thermotoga maritima TTUDGA, Bacillus phage SPO1 DNA polymerase, and similar proteins	NA|262aa|up_3|NZ_CP015498.1_863814_864600_+	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases	NA|209aa|up_2|NZ_CP015498.1_864628_865255_-	PRK00215, PRK00215, transcriptional repressor LexA	NA|88aa|up_1|NZ_CP015498.1_865405_865669_+	pfam05979, DUF896, Bacterial protein of unknown function (DUF896)	NA|73aa|up_0|NZ_CP015498.1_865731_865950_+	pfam03672, UPF0154, Uncharacterized protein family (UPF0154)	NA|648aa|down_0|NZ_CP015498.1_867662_869606_+	cd08662, M13, Peptidase family M13 includes neprilysin and endothelin-converting enzyme I	NA|394aa|down_1|NZ_CP015498.1_869663_870845_-	COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]	NA|205aa|down_2|NZ_CP015498.1_870904_871519_-	COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]	NA|344aa|down_3|NZ_CP015498.1_871584_872616_+	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|258aa|down_4|NZ_CP015498.1_872777_873551_+	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|342aa|down_5|NZ_CP015498.1_873584_874610_+	PRK09377, tsf, elongation factor Ts; Provisional	NA|242aa|down_6|NZ_CP015498.1_874748_875474_+	PRK00358, pyrH, uridylate kinase; Provisional	NA|186aa|down_7|NZ_CP015498.1_875473_876031_+	PRK00083, frr, ribosome recycling factor; Reviewed	NA|245aa|down_8|NZ_CP015498.1_876033_876768_+	PRK14830, PRK14830, undecaprenyl pyrophosphate synthase; Provisional	NA|272aa|down_9|NZ_CP015498.1_876769_877585_+	pfam01148, CTP_transf_1, Cytidylyltransferase family
GCF_002849955.1_ASM284995v1	NZ_CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	3	1681342-1681521	1	PILER-CR	no		cas14j,cas3,csa3,cas2,cas14k,DEDDh,DinG,WYL,RT,Cas14u_CAS-V	Orphan	ATGTGGGATTTGAACCCACGC	21	0	0	NA	NA	NA	2	2	Orphan	cas14j,cas3,csa3,cas2,cas14k,DEDDh,DinG,WYL,RT,Cas14u_CAS-V	NA|224aa|up_6|NZ_CP015498.1_1669716_1670388_-,NA|130aa|down_1|NZ_CP015498.1_1683557_1683947_-	NA|154aa|up_9|NZ_CP015498.1_1667568_1668030_-	pfam12802, MarR_2, MarR family	NA|273aa|up_8|NZ_CP015498.1_1668174_1668993_+	cd13689, PBP2_BsGlnH, Substrate binding domain of ABC glutamine transporter from Bacillus subtilis; the type 2 periplasmic-bindig protein fold	NA|223aa|up_7|NZ_CP015498.1_1669035_1669704_-	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain	NA|224aa|up_6|NZ_CP015498.1_1669716_1670388_-	NA	NA|541aa|up_5|NZ_CP015498.1_1670664_1672287_-	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional	NA|361aa|up_4|NZ_CP015498.1_1672391_1673474_-	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|402aa|up_3|NZ_CP015498.1_1673600_1674806_+	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|490aa|up_2|NZ_CP015498.1_1674829_1676299_-	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|177aa|up_1|NZ_CP015498.1_1676590_1677121_+	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA|443aa|up_0|NZ_CP015498.1_1677133_1678462_+	PRK10720, PRK10720, uracil transporter; Provisional	NA|167aa|down_0|NZ_CP015498.1_1681690_1682191_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|130aa|down_1|NZ_CP015498.1_1683557_1683947_-	NA	NA|469aa|down_2|NZ_CP015498.1_1684192_1685599_+	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)	NA|67aa|down_3|NZ_CP015498.1_1685816_1686017_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|469aa|down_4|NZ_CP015498.1_1687192_1688599_+	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)	NA|451aa|down_5|NZ_CP015498.1_1689087_1690440_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|459aa|down_6|NZ_CP015498.1_1690804_1692181_+	TIGR00931, Uncharacterized_Na+/H+_antiporter_HI_1107, Na+/H+ antiporter NhaC	NA|393aa|down_7|NZ_CP015498.1_1692779_1693958_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|235aa|down_8|NZ_CP015498.1_1694121_1694826_+	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|231aa|down_9|NZ_CP015498.1_1694869_1695562_-	pfam06736, DUF1211, Protein of unknown function (DUF1211)
GCF_002849955.1_ASM284995v1	NZ_CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	4	1885711-1885866	3	CRISPRCasFinder	no		cas14j,cas3,csa3,cas2,cas14k,DEDDh,DinG,WYL,RT,Cas14u_CAS-V	Orphan	AAACCCTTGCTACGAGCGAAAGTCTAAAAAATAGAC	36	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,csa3,cas2,cas14k,DEDDh,DinG,WYL,RT,Cas14u_CAS-V	NA,NA|62aa|down_1|NZ_CP015498.1_1887127_1887313_+,NA|93aa|down_2|NZ_CP015498.1_1887389_1887668_-,NA|70aa|down_3|NZ_CP015498.1_1887690_1887900_-,NA|238aa|down_6|NZ_CP015498.1_1891065_1891779_-	NA|166aa|up_9|NZ_CP015498.1_1875106_1875604_-	COG5017, COG5017, Uncharacterized conserved protein [Function unknown]	NA|150aa|up_8|NZ_CP015498.1_1875603_1876053_-	pfam08660, Alg14, Oligosaccharide biosynthesis protein Alg14 like	NA|217aa|up_7|NZ_CP015498.1_1876068_1876719_-	pfam02397, Bac_transf, Bacterial sugar transferase	NA|257aa|up_6|NZ_CP015498.1_1876838_1877609_-	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|265aa|up_5|NZ_CP015498.1_1877608_1878403_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|295aa|up_4|NZ_CP015498.1_1878413_1879298_-	TIGR01006, Capsular_polysaccharide_biosynthesis_protein_CapA, polysaccharide export protein, MPA1 family, Gram-positive type	NA|354aa|up_3|NZ_CP015498.1_1879309_1880371_-	PRK09379, PRK09379, LytR family transcriptional regulator	NA|422aa|up_2|NZ_CP015498.1_1880845_1882111_+	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|337aa|up_1|NZ_CP015498.1_1882132_1883143_+	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins	NA|311aa|up_0|NZ_CP015498.1_1883353_1884286_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|94aa|down_0|NZ_CP015498.1_1886799_1887081_+	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family	NA|62aa|down_1|NZ_CP015498.1_1887127_1887313_+	NA	NA|93aa|down_2|NZ_CP015498.1_1887389_1887668_-	NA	NA|70aa|down_3|NZ_CP015498.1_1887690_1887900_-	NA	NA|687aa|down_4|NZ_CP015498.1_1888170_1890231_+	pfam03389, MobA_MobL, MobA/MobL family	NA|192aa|down_5|NZ_CP015498.1_1890360_1890936_-	smart00739, KOW, KOW (Kyprides, Ouzounis, Woese) motif	NA|238aa|down_6|NZ_CP015498.1_1891065_1891779_-	NA	NA|492aa|down_7|NZ_CP015498.1_1891771_1893247_-	NF033449, BREX_PglZ_3, BREX-3 system phosphatase PglZ	NA|892aa|down_8|NZ_CP015498.1_1893249_1895925_-	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA	NA|849aa|down_9|NZ_CP015498.1_1895960_1898507_-	COG1743, COG1743, Adenine-specific DNA methylase containing a Zn-ribbon [DNA replication, recombination, and repair]
