assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002848585.1_ASM284858v1	NZ_CP025461	Klebsiella pneumoniae strain F44 chromosome, complete genome	1	846438-846523	1	CRISPRCasFinder	no		DEDDh,cas3,WYL,DinG,RT,csa3	Orphan	AATAAAAACCATAAAAACCACAGT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,DinG,RT,csa3,c2c9_V-U4	NA,NA	NA|160aa|up_9|NZ_CP025461.1_835408_835888_+	PRK10769, folA, type 3 dihydrofolate reductase	NA|283aa|up_8|NZ_CP025461.1_836143_836992_-	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|126aa|up_7|NZ_CP025461.1_836996_837374_-	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|274aa|up_6|NZ_CP025461.1_837376_838198_-	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|330aa|up_5|NZ_CP025461.1_838194_839184_-	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|429aa|up_4|NZ_CP025461.1_839189_840476_-	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|783aa|up_3|NZ_CP025461.1_840530_842879_-	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|276aa|up_2|NZ_CP025461.1_843122_843950_+	PRK09430, djlA, co-chaperone DjlA	NA|233aa|up_1|NZ_CP025461.1_843982_844681_-	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|542aa|up_0|NZ_CP025461.1_844670_846296_-	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|455aa|down_0|NZ_CP025461.1_846620_847985_+	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family	NA|180aa|down_1|NZ_CP025461.1_848164_848704_+	TIGR03124, citrate_citX, holo-ACP synthase CitX	NA|220aa|down_2|NZ_CP025461.1_848778_849438_-	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|969aa|down_3|NZ_CP025461.1_849450_852357_-	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|786aa|down_4|NZ_CP025461.1_852544_854902_-	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|232aa|down_5|NZ_CP025461.1_855077_855773_-	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|501aa|down_6|NZ_CP025461.1_855910_857413_-	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|570aa|down_7|NZ_CP025461.1_857423_859133_-	PRK04123, PRK04123, ribulokinase; Provisional	NA|282aa|down_8|NZ_CP025461.1_859470_860316_+	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|256aa|down_9|NZ_CP025461.1_860444_861212_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]
GCF_002848585.1_ASM284858v1	NZ_CP025461	Klebsiella pneumoniae strain F44 chromosome, complete genome	2	1667911-1667988	2	CRISPRCasFinder	no		DEDDh,cas3,WYL,DinG,RT,csa3	Orphan	AAGGCGTCAGCCGCCGCCCGGCA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,DinG,RT,csa3,c2c9_V-U4	NA|169aa|up_8|NZ_CP025461.1_1655887_1656394_+,NA|71aa|down_7|NZ_CP025461.1_1674589_1674802_-,NA|31aa|down_9|NZ_CP025461.1_1677412_1677505_+	NA|71aa|up_9|NZ_CP025461.1_1654939_1655152_-	pfam10684, BDM, Putative biofilm-dependent modulation protein	NA|169aa|up_8|NZ_CP025461.1_1655887_1656394_+	NA	NA|308aa|up_7|NZ_CP025461.1_1656410_1657334_-	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only]	NA|428aa|up_6|NZ_CP025461.1_1658029_1659313_-	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|406aa|up_5|NZ_CP025461.1_1659569_1660787_+	PRK09356, PRK09356, imidazolonepropionase; Validated	NA|319aa|up_4|NZ_CP025461.1_1660783_1661740_+	PRK01722, PRK01722, formimidoylglutamase; Provisional	NA|242aa|up_3|NZ_CP025461.1_1661801_1662527_+	PRK14999, PRK14999, histidine utilization repressor; Provisional	NA|563aa|up_2|NZ_CP025461.1_1662669_1664358_+	PRK05414, PRK05414, urocanate hydratase; Provisional	NA|509aa|up_1|NZ_CP025461.1_1664354_1665881_+	PRK09367, PRK09367, histidine ammonia-lyase; Provisional	NA|461aa|up_0|NZ_CP025461.1_1665979_1667362_+	PRK10580, proY, putative proline-specific permease; Provisional	NA|159aa|down_0|NZ_CP025461.1_1668140_1668617_-	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|430aa|down_1|NZ_CP025461.1_1668687_1669977_-	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|347aa|down_2|NZ_CP025461.1_1670190_1671231_+	PRK15108, PRK15108, biotin synthase; Provisional	NA|386aa|down_3|NZ_CP025461.1_1671227_1672385_+	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|252aa|down_4|NZ_CP025461.1_1672368_1673124_+	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|241aa|down_5|NZ_CP025461.1_1673116_1673839_+	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|241aa|down_6|NZ_CP025461.1_1673780_1674503_-	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|71aa|down_7|NZ_CP025461.1_1674589_1674802_-	NA	NA|674aa|down_8|NZ_CP025461.1_1675213_1677235_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|31aa|down_9|NZ_CP025461.1_1677412_1677505_+	NA
GCF_002848585.1_ASM284858v1	NZ_CP025461	Klebsiella pneumoniae strain F44 chromosome, complete genome	3	4768563-4768661	3	CRISPRCasFinder	no		DEDDh,cas3,WYL,DinG,RT,csa3	Orphan	CAGATAGGCCGCGCGCAGCAGCGCGCG	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,DinG,RT,csa3,c2c9_V-U4	NA,NA|49aa|down_6|NZ_CP025461.1_4775617_4775764_-	NA|211aa|up_9|NZ_CP025461.1_4757444_4758077_-	PRK10729, nudF, ADP-ribose pyrophosphatase NudF; Provisional	NA|490aa|up_8|NZ_CP025461.1_4758273_4759743_+	PRK09465, tolC, outer membrane channel protein; Reviewed	NA|224aa|up_7|NZ_CP025461.1_4759910_4760582_+	PRK11653, PRK11653, DUF1190 family protein	NA|387aa|up_6|NZ_CP025461.1_4760587_4761748_+	pfam03738, GSP_synth, Glutathionylspermidine synthase preATP-grasp	NA|264aa|up_5|NZ_CP025461.1_4761792_4762584_-	PRK10628, PRK10628, LigB family dioxygenase; Provisional	NA|257aa|up_4|NZ_CP025461.1_4762770_4763541_+	PRK04201, PRK04201, zinc transporter ZupT; Provisional	NA|218aa|up_3|NZ_CP025461.1_4763602_4764256_-	PRK03353, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional	NA|91aa|up_2|NZ_CP025461.1_4764633_4764906_+	COG2960, COG2960, Uncharacterized protein conserved in bacteria [Function unknown]	NA|66aa|up_1|NZ_CP025461.1_4764941_4765139_-	PRK02922, PRK02922, cell surface composition regulator GlgS	NA|478aa|up_0|NZ_CP025461.1_4765357_4766791_-	PRK11316, PRK11316, bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	NA|433aa|down_0|NZ_CP025461.1_4769779_4771078_-	COG3025, COG3025, Uncharacterized conserved protein [Function unknown]	NA|207aa|down_1|NZ_CP025461.1_4771292_4771913_+	PRK10884, PRK10884, SH3 domain-containing protein; Provisional	NA|414aa|down_2|NZ_CP025461.1_4771974_4773216_+	PRK10885, cca, multifunctional CCA addition/repair protein	NA|274aa|down_3|NZ_CP025461.1_4773227_4774049_-	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|128aa|down_4|NZ_CP025461.1_4774247_4774631_-	PRK11593, folB, bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase	NA|206aa|down_5|NZ_CP025461.1_4774738_4775356_+	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY	NA|49aa|down_6|NZ_CP025461.1_4775617_4775764_-	NA	NA|275aa|down_7|NZ_CP025461.1_4775753_4776578_+	COG0829, UreH, Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones]	NA|101aa|down_8|NZ_CP025461.1_4776587_4776890_+	PRK13241, ureA, urease subunit gamma; Provisional	NA|107aa|down_9|NZ_CP025461.1_4776899_4777220_+	PRK13203, ureB, urease subunit beta; Reviewed
GCF_002848585.1_ASM284858v1	NZ_CP025462	Klebsiella pneumoniae strain F44 plasmid p44-1, complete sequence	1	42926-43013	1	CRISPRCasFinder	no	RT,DinG	RT,DinG,c2c9_V-U4	Unclear	CGGGGGGAATACTTCCAGCCAGCGGGT	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,DinG,RT,csa3,c2c9_V-U4	NA|65aa|up_9|NZ_CP025462.1_31383_31578_+,NA|87aa|up_5|NZ_CP025462.1_37260_37521_+,NA|236aa|down_1|NZ_CP025462.1_44221_44929_-,NA|264aa|down_4|NZ_CP025462.1_47368_48160_-,NA|138aa|down_5|NZ_CP025462.1_48222_48636_-,NA|163aa|down_6|NZ_CP025462.1_48720_49209_-,NA|137aa|down_7|NZ_CP025462.1_49260_49671_-,NA|136aa|down_8|NZ_CP025462.1_49700_50108_-,NA|132aa|down_9|NZ_CP025462.1_50117_50513_-	NA|65aa|up_9|NZ_CP025462.1_31383_31578_+	NA	NA|390aa|up_8|NZ_CP025462.1_32110_33279_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|447aa|up_7|NZ_CP025462.1_34020_35361_-	pfam13518, HTH_28, Helix-turn-helix domain	NA|394aa|up_6|NZ_CP025462.1_35508_36690_+	pfam00665, rve, Integrase core domain	NA|87aa|up_5|NZ_CP025462.1_37260_37521_+	NA	NA|157aa|up_4|NZ_CP025462.1_37630_38101_-	pfam08808, RES, RES domain	NA|148aa|up_3|NZ_CP025462.1_38097_38541_-	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family	NA|424aa|up_2|NZ_CP025462.1_38641_39913_-	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC	NA|141aa|up_1|NZ_CP025462.1_39912_40335_-	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit	RT|495aa|up_0|NZ_CP025462.1_40420_41905_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|264aa|down_0|NZ_CP025462.1_43185_43977_-	pfam08317, Spc7, Spc7 kinetochore protein	NA|236aa|down_1|NZ_CP025462.1_44221_44929_-	NA	DinG|625aa|down_2|NZ_CP025462.1_44922_46797_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|189aa|down_3|NZ_CP025462.1_46799_47366_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	NA|264aa|down_4|NZ_CP025462.1_47368_48160_-	NA	NA|138aa|down_5|NZ_CP025462.1_48222_48636_-	NA	NA|163aa|down_6|NZ_CP025462.1_48720_49209_-	NA	NA|137aa|down_7|NZ_CP025462.1_49260_49671_-	NA	NA|136aa|down_8|NZ_CP025462.1_49700_50108_-	NA	NA|132aa|down_9|NZ_CP025462.1_50117_50513_-	NA
