assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002844395.1_ASM284439v1	NZ_CP025197	Hungateiclostridium saccincola strain GGR1 chromosome, complete genome	1	1088796-1099162	1,1,1	CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas4,cas3,cas5,cas7,cas8b1,cas6,cas10,csm3gr7,csx10gr5,csx19,csx1	cas3,csa3,RT,cas1,cas2,cas4,cas5,cas7,cas8b1,cas6,cas10,csm3gr7,csx10gr5,csx19,csx1,PD-DExK,cmr3gr5,DEDDh,csm2gr11,csm4gr5	Type III-D,Type III-A,Type III-B,Type I-B,Type III-C	GTTTCAATTCCTCATAGGTACTGTAAAAAC,GTTTCAATTCCTCATAGGTACTGTAAAAAC,GTTTCAATTCCTCATAGGTACTGTAAAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	155,154,154	155	TypeIII-D,TypeIII-A,TypeIII-B,TypeI-B,TypeIII-C	cas3,csa3,RT,cas1,cas2,cas4,cas5,cas7,cas8b1,cas6,cas10,csm3gr7,csx10gr5,csx19,csx1,PD-DExK,cmr3gr5,DEDDh,csm2gr11,csm4gr5	NA|580aa|up_4|NZ_CP025197.1_1080076_1081816_-,NA|53aa|up_2|NZ_CP025197.1_1083636_1083795_-,NA|72aa|down_1|NZ_CP025197.1_1099668_1099884_-,cas8b1|555aa|down_7|NZ_CP025197.1_1105490_1107155_-	NA|250aa|up_9|NZ_CP025197.1_1075260_1076010_+	cd18082, SpoU-like_family, SAM-dependent rRNA or tRNA methylase related to SpoU	NA|119aa|up_8|NZ_CP025197.1_1076181_1076538_-	cd11532, NTP-PPase_COG4997, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|239aa|up_7|NZ_CP025197.1_1076857_1077574_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|403aa|up_6|NZ_CP025197.1_1077605_1078814_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|399aa|up_5|NZ_CP025197.1_1078853_1080050_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|580aa|up_4|NZ_CP025197.1_1080076_1081816_-	NA	NA|380aa|up_3|NZ_CP025197.1_1082077_1083217_+	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]	NA|53aa|up_2|NZ_CP025197.1_1083636_1083795_-	NA	NA|949aa|up_1|NZ_CP025197.1_1084067_1086914_+	pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9	NA|147aa|up_0|NZ_CP025197.1_1087134_1087575_+	pfam14690, zf-ISL3, zinc-finger of transposase IS204/IS1001/IS1096/IS1165	cas2|88aa|down_0|NZ_CP025197.1_1099427_1099691_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|72aa|down_1|NZ_CP025197.1_1099668_1099884_-	NA	cas1|331aa|down_2|NZ_CP025197.1_1099892_1100885_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|166aa|down_3|NZ_CP025197.1_1100907_1101405_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|756aa|down_4|NZ_CP025197.1_1101566_1103834_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|241aa|down_5|NZ_CP025197.1_1103865_1104588_-	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas7|294aa|down_6|NZ_CP025197.1_1104605_1105487_-	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP	cas8b1|555aa|down_7|NZ_CP025197.1_1105490_1107155_-	NA	cas6|240aa|down_8|NZ_CP025197.1_1107170_1107890_-	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cas10|483aa|down_9|NZ_CP025197.1_1108351_1109800_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10
GCF_002844395.1_ASM284439v1	NZ_CP025197	Hungateiclostridium saccincola strain GGR1 chromosome, complete genome	2	1118805-1131787	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas3,cas5,cas7,cas8b1,cas6,cas10,csm3gr7,csx10gr5,csx19,csx1	cas3,csa3,RT,cas1,cas2,cas4,cas5,cas7,cas8b1,cas6,cas10,csm3gr7,csx10gr5,csx19,csx1,PD-DExK,cmr3gr5,DEDDh,csm2gr11,csm4gr5	Type III-D,Type III-A,Type III-B,Type I-B,Type III-C	GTTTCAATTCCTCATAGGTACTGTAAAAAC,GTTTCAATTCCTCATAGGTACTGTAAAAAC,GTTTCAATTCCTCATAGGTACTGTAAAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	194,194,193	194	TypeIII-D,TypeIII-A,TypeIII-B,TypeI-B,TypeIII-C	cas3,csa3,RT,cas1,cas2,cas4,cas5,cas7,cas8b1,cas6,cas10,csm3gr7,csx10gr5,csx19,csx1,PD-DExK,cmr3gr5,DEDDh,csm2gr11,csm4gr5	cas8b1|555aa|up_9|NZ_CP025197.1_1105490_1107155_-,csx19|122aa|up_3|NZ_CP025197.1_1113396_1113762_+,NA|107aa|down_7|NZ_CP025197.1_1136690_1137011_+	cas8b1|555aa|up_9|NZ_CP025197.1_1105490_1107155_-	NA	cas6|240aa|up_8|NZ_CP025197.1_1107170_1107890_-	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cas10|483aa|up_7|NZ_CP025197.1_1108351_1109800_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm3gr7|225aa|up_6|NZ_CP025197.1_1109812_1110487_+	pfam03787, RAMPs, RAMP superfamily	csx10gr5|530aa|up_5|NZ_CP025197.1_1110479_1112069_+	TIGR02674, cas_cyan_RAMP_2, CRISPR-associated RAMP protein, Csx10 family	csm3gr7|441aa|up_4|NZ_CP025197.1_1112068_1113391_+	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csx19|122aa|up_3|NZ_CP025197.1_1113396_1113762_+	NA	csm3gr7|683aa|up_2|NZ_CP025197.1_1113765_1115814_+	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	csx1|441aa|up_1|NZ_CP025197.1_1115832_1117155_+	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	csx1|481aa|up_0|NZ_CP025197.1_1117144_1118587_+	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|69aa|down_0|NZ_CP025197.1_1132106_1132313_+	pfam07870, DUF1657, Protein of unknown function (DUF1657)	NA|287aa|down_1|NZ_CP025197.1_1132324_1133185_+	COG2323, COG2323, Predicted membrane protein [Function unknown]	NA|160aa|down_2|NZ_CP025197.1_1133458_1133938_+	TIGR02838, stage_V_sporulation_protein_AC, stage V sporulation protein AC	NA|334aa|down_3|NZ_CP025197.1_1133938_1134940_+	PRK12404, PRK12404, stage V sporulation protein AD; Provisional	NA|118aa|down_4|NZ_CP025197.1_1134971_1135325_+	TIGR02839, stage_V_sporulation_protein_AE, stage V sporulation protein AE	NA|70aa|down_5|NZ_CP025197.1_1135380_1135590_+	pfam07870, DUF1657, Protein of unknown function (DUF1657)	NA|212aa|down_6|NZ_CP025197.1_1135869_1136505_-	pfam09580, Spore_YhcN_YlaJ, Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)	NA|107aa|down_7|NZ_CP025197.1_1136690_1137011_+	NA	NA|432aa|down_8|NZ_CP025197.1_1137104_1138400_+	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|386aa|down_9|NZ_CP025197.1_1138557_1139715_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]
GCF_002844395.1_ASM284439v1	NZ_CP025197	Hungateiclostridium saccincola strain GGR1 chromosome, complete genome	3	3052365-3052462	3	CRISPRCasFinder	no	cas10,csm2gr11,csm3gr7,csm4gr5,cas6,csx1	cas3,csa3,RT,cas1,cas2,cas4,cas5,cas7,cas8b1,cas6,cas10,csm3gr7,csx10gr5,csx19,csx1,PD-DExK,cmr3gr5,DEDDh,csm2gr11,csm4gr5	Type III-A,Type III-C,Type III-B,Type III-D	GTTGAACTCCCCCACGCACCACGGGAATTG	30	0	0	NA	NA	NA	1	1	TypeIII-A,TypeIII-C,TypeIII-B,TypeIII-D	cas3,csa3,RT,cas1,cas2,cas4,cas5,cas7,cas8b1,cas6,cas10,csm3gr7,csx10gr5,csx19,csx1,PD-DExK,cmr3gr5,DEDDh,csm2gr11,csm4gr5	NA|193aa|up_6|NZ_CP025197.1_3043127_3043706_-,csx1|547aa|down_0|NZ_CP025197.1_3052548_3054189_-,NA|74aa|down_3|NZ_CP025197.1_3058785_3059007_+,NA|178aa|down_5|NZ_CP025197.1_3060130_3060664_+	NA|263aa|up_9|NZ_CP025197.1_3040637_3041426_+	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)	NA|69aa|up_8|NZ_CP025197.1_3041626_3041833_-	smart00860, SMI1_KNR4, SMI1 / KNR4 family	NA|244aa|up_7|NZ_CP025197.1_3042045_3042777_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|193aa|up_6|NZ_CP025197.1_3043127_3043706_-	NA	NA|210aa|up_5|NZ_CP025197.1_3045123_3045753_+	PRK09183, PRK09183, transposase/IS protein; Provisional	cas10|775aa|up_4|NZ_CP025197.1_3046746_3049071_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|182aa|up_3|NZ_CP025197.1_3049075_3049621_+	pfam03750, Csm2_III-A, Csm2 Type III-A	csm3gr7|226aa|up_2|NZ_CP025197.1_3049639_3050317_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|290aa|up_1|NZ_CP025197.1_3050399_3051269_+	TIGR01903, Hypothetical_protein	cas6|271aa|up_0|NZ_CP025197.1_3051272_3052085_+	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csx1|547aa|down_0|NZ_CP025197.1_3052548_3054189_-	NA	NA|433aa|down_1|NZ_CP025197.1_3055081_3056380_+	pfam04986, Y2_Tnp, Putative transposase	NA|293aa|down_2|NZ_CP025197.1_3057425_3058304_+	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|74aa|down_3|NZ_CP025197.1_3058785_3059007_+	NA	NA|34aa|down_4|NZ_CP025197.1_3059017_3059119_+	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate	NA|178aa|down_5|NZ_CP025197.1_3060130_3060664_+	NA	NA|138aa|down_6|NZ_CP025197.1_3060721_3061135_-	cd00557, Translocase_SecB, Preprotein translocase subunit SecB	NA|407aa|down_7|NZ_CP025197.1_3066497_3067718_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|245aa|down_8|NZ_CP025197.1_3068214_3068949_-	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|309aa|down_9|NZ_CP025197.1_3069107_3070034_+	COG0583, LysR, Transcriptional regulator [Transcription]
GCF_002844395.1_ASM284439v1	NZ_CP025197	Hungateiclostridium saccincola strain GGR1 chromosome, complete genome	4	3054530-3054905	3,4	PILER-CR,CRISPRCasFinder	no	cas10,csm2gr11,csm3gr7,csm4gr5,cas6,csx1	cas3,csa3,RT,cas1,cas2,cas4,cas5,cas7,cas8b1,cas6,cas10,csm3gr7,csx10gr5,csx19,csx1,PD-DExK,cmr3gr5,DEDDh,csm2gr11,csm4gr5	Type III-A,Type III-C,Type III-B,Type III-D	GTTGAACTTCCCCACGCAGTACGGGAATTGAAATC,GTTGAACTTCCCCACGCAGTACGGGAATTGAAAT	35,34	0	0	NA	NA	NA:NA	4,5	5	TypeIII-A,TypeIII-C,TypeIII-B,TypeIII-D	cas3,csa3,RT,cas1,cas2,cas4,cas5,cas7,cas8b1,cas6,cas10,csm3gr7,csx10gr5,csx19,csx1,PD-DExK,cmr3gr5,DEDDh,csm2gr11,csm4gr5	NA|193aa|up_7|NZ_CP025197.1_3043127_3043706_-,csx1|547aa|up_0|NZ_CP025197.1_3052548_3054189_-,NA|74aa|down_2|NZ_CP025197.1_3058785_3059007_+,NA|178aa|down_4|NZ_CP025197.1_3060130_3060664_+	NA|69aa|up_9|NZ_CP025197.1_3041626_3041833_-	smart00860, SMI1_KNR4, SMI1 / KNR4 family	NA|244aa|up_8|NZ_CP025197.1_3042045_3042777_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|193aa|up_7|NZ_CP025197.1_3043127_3043706_-	NA	NA|210aa|up_6|NZ_CP025197.1_3045123_3045753_+	PRK09183, PRK09183, transposase/IS protein; Provisional	cas10|775aa|up_5|NZ_CP025197.1_3046746_3049071_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|182aa|up_4|NZ_CP025197.1_3049075_3049621_+	pfam03750, Csm2_III-A, Csm2 Type III-A	csm3gr7|226aa|up_3|NZ_CP025197.1_3049639_3050317_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|290aa|up_2|NZ_CP025197.1_3050399_3051269_+	TIGR01903, Hypothetical_protein	cas6|271aa|up_1|NZ_CP025197.1_3051272_3052085_+	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csx1|547aa|up_0|NZ_CP025197.1_3052548_3054189_-	NA	NA|433aa|down_0|NZ_CP025197.1_3055081_3056380_+	pfam04986, Y2_Tnp, Putative transposase	NA|293aa|down_1|NZ_CP025197.1_3057425_3058304_+	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|74aa|down_2|NZ_CP025197.1_3058785_3059007_+	NA	NA|34aa|down_3|NZ_CP025197.1_3059017_3059119_+	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate	NA|178aa|down_4|NZ_CP025197.1_3060130_3060664_+	NA	NA|138aa|down_5|NZ_CP025197.1_3060721_3061135_-	cd00557, Translocase_SecB, Preprotein translocase subunit SecB	NA|407aa|down_6|NZ_CP025197.1_3066497_3067718_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|245aa|down_7|NZ_CP025197.1_3068214_3068949_-	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|309aa|down_8|NZ_CP025197.1_3069107_3070034_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|288aa|down_9|NZ_CP025197.1_3070067_3070931_-	TIGR00676, 510-methylenetetrahydrofolate_reductase
