The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP021558	Bifidobacterium breve strain 215W447a chromosome, complete genome	2589602	1230763	1273871	2589602	transposase,integrase	Thermus_phage(20.0%)	57	1224796:1224812	1251937:1251953
1224796:1224812	attL	AGTTCACGCTTGCCGAC	NA	NA	NA	NA
WP_106641410.1|1230763_1231954_+|integrase	site-specific integrase	integrase	I3NLE2	Bifidobacterium_phage	33.0	1.2e-45
WP_106641411.1|1235966_1237037_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106641781.1|1237283_1237487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641782.1|1237811_1237871_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641412.1|1237889_1238261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641413.1|1239025_1239388_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641414.1|1239384_1239921_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641415.1|1239917_1240208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641416.1|1240204_1240534_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641417.1|1240530_1240767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641418.1|1240763_1241735_-	site-specific DNA-methyltransferase	NA	A0A142KCX9	Gordonia_phage	43.2	3.7e-66
WP_106641419.1|1241629_1241917_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641420.1|1241913_1242381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052791124.1|1242380_1242578_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106620826.1|1242577_1243219_-	hypothetical protein	NA	NA	NA	NA	NA
WP_101026238.1|1243215_1243809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058060804.1|1243805_1244594_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641421.1|1245009_1245372_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106620830.1|1246274_1246820_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641422.1|1246824_1247172_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641423.1|1247206_1247590_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641424.1|1247633_1248125_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157826226.1|1248149_1248956_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_157826227.1|1249056_1249524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106641427.1|1249566_1252365_-	class I SAM-dependent DNA methyltransferase	NA	Q6NE04	Leptospira_phage	34.0	1.4e-137
1251937:1251953	attR	GTCGGCAAGCGTGAACT	NA	NA	NA	NA
WP_106641783.1|1252357_1252981_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641428.1|1253219_1253849_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641429.1|1254024_1254228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052791176.1|1254269_1254821_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641430.1|1254813_1255995_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_106641431.1|1256079_1257270_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A7P9	Microcystis_virus	35.1	2.0e-50
WP_106641432.1|1257269_1257878_-|transposase	IS607 family transposase	transposase	Q331V0	Clostridium_botulinum_C_phage	39.8	2.1e-35
WP_106641433.1|1257910_1258963_-	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
WP_106641434.1|1258959_1259343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641784.1|1259342_1260692_-	hypothetical protein	NA	A0A0N9RU46	Staphylococcus_phage	34.6	5.0e-45
WP_100991616.1|1260760_1261234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641435.1|1261386_1261671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052791182.1|1261663_1261966_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA	NA
WP_106641436.1|1261971_1262304_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100991622.1|1262416_1263004_+|transposase	IS607 family transposase	transposase	F9VHY9	Thermus_phage	49.2	7.7e-43
WP_157826228.1|1262987_1264439_+|transposase	transposase	transposase	A0A068A1P5	Thermus_phage	28.6	8.4e-06
WP_106641437.1|1264416_1264650_-	restriction endonuclease	NA	NA	NA	NA	NA
WP_106641438.1|1264649_1265987_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641439.1|1265983_1266211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641440.1|1266207_1266696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641441.1|1266796_1267666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157826229.1|1267816_1268134_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641443.1|1268130_1268487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641444.1|1268483_1269209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641445.1|1269202_1269460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641446.1|1269624_1270215_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_106620847.1|1270211_1270478_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106620848.1|1270458_1270701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052791191.1|1270697_1271252_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_106641447.1|1271348_1272386_-	2'-5' RNA ligase	NA	A0A240F3G9	Aeromonas_phage	27.9	2.3e-21
WP_014484881.1|1272658_1272859_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106620852.1|1273271_1273871_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A142F1Q5	Bacillus_phage	39.8	7.9e-11
>prophage 2
NZ_CP021558	Bifidobacterium breve strain 215W447a chromosome, complete genome	2589602	1350997	1380916	2589602	transposase	Lactobacillus_phage(28.57%)	25	NA	NA
WP_015439061.1|1350997_1352497_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	24.6	1.8e-11
WP_106641495.1|1352608_1353118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641496.1|1353616_1354171_+	DNA polymerase III	NA	B5LWG6	Feldmannia_species_virus	26.6	5.3e-09
WP_106641497.1|1354155_1354470_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106641498.1|1354664_1354997_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106641499.1|1355931_1356651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157826243.1|1356749_1357643_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641500.1|1357827_1358757_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157826244.1|1358855_1359014_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641501.1|1359100_1359352_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641502.1|1359550_1360681_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0P0IJS6	Lactobacillus_phage	40.9	1.4e-72
WP_106641503.1|1360723_1361353_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641504.1|1361665_1361914_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106641505.1|1361918_1362101_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157826245.1|1362165_1362663_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641507.1|1362807_1369026_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106620926.1|1369220_1369895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106620927.1|1369954_1370878_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0R8V9X2	Thermobifida_phage	55.5	5.8e-77
WP_106641508.1|1371010_1372201_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0P0IJS6	Lactobacillus_phage	35.9	5.2e-22
WP_106641509.1|1372224_1372629_+|transposase	IS200/IS605 family transposase	transposase	Q331U4	Clostridium_botulinum_C_phage	37.6	5.7e-21
WP_106620930.1|1373213_1373462_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_106620931.1|1373458_1374232_+	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_106641512.1|1378865_1379279_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157826246.1|1379344_1379563_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106641513.1|1379575_1380916_-|transposase	transposase	transposase	A0A0A8WI33	Clostridium_phage	27.5	1.9e-28
>prophage 3
NZ_CP021558	Bifidobacterium breve strain 215W447a chromosome, complete genome	2589602	1707334	1733246	2589602	protease,portal,capsid,terminase,head	Bifidobacterium_phage(30.0%)	38	NA	NA
WP_106641612.1|1707334_1710484_-	hypothetical protein	NA	D7RWD8	Brochothrix_phage	49.0	1.5e-15
WP_157826256.1|1710503_1710701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641614.1|1710823_1711243_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641615.1|1712083_1712503_-	hypothetical protein	NA	A0A1D8ETE2	Propionibacterium_phage	48.6	9.1e-30
WP_106641616.1|1712499_1712784_-	HK97 gp10 family phage protein	NA	A0A1P8VV83	Rathayibacter_phage	53.9	2.4e-18
WP_065453320.1|1712783_1713176_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641807.1|1713172_1713691_-	hypothetical protein	NA	A0A1D8ETD3	Propionibacterium_phage	31.7	1.8e-11
WP_106641617.1|1713705_1714065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641618.1|1714061_1715264_-|capsid	phage major capsid protein	capsid	A0A1D8ETI2	Propionibacterium_phage	52.2	2.1e-111
WP_106641619.1|1715278_1716061_-|head,protease	HK97 family phage prohead protease	head,protease	A0A0E3XB56	Gordonia_phage	39.0	8.4e-29
WP_106641620.1|1716057_1717464_-|portal	phage portal protein	portal	A0A222ZFM5	Arthrobacter_phage	34.9	2.3e-45
WP_106641621.1|1717485_1719099_-|terminase	terminase	terminase	A0A1D8ETA8	Propionibacterium_phage	51.3	4.3e-136
WP_106641622.1|1719112_1719475_-	hypothetical protein	NA	A6N1Z4	Microbacterium_phage	39.7	8.4e-08
WP_106641623.1|1719567_1719864_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641625.1|1720306_1721059_-	PhnA protein	NA	I3NLB4	Bifidobacterium_phage	26.8	1.9e-14
WP_065453311.1|1721055_1721199_-	antitoxin	NA	NA	NA	NA	NA
WP_106641808.1|1721203_1721329_-	GTP-binding protein	NA	NA	NA	NA	NA
WP_106641626.1|1721532_1721769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641627.1|1721749_1722565_-	hypothetical protein	NA	A0A1U9WS24	Gordonia_phage	31.6	2.8e-06
WP_106641628.1|1722581_1723040_-	phage N-6-adenine-methyltransferase	NA	A0A126HBP0	Lactococcus_phage	50.8	7.9e-35
WP_106641629.1|1723244_1723574_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641630.1|1723570_1724050_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641631.1|1724242_1724638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641633.1|1724764_1725286_-	single-stranded DNA-binding protein	NA	I3NLC3	Bifidobacterium_phage	60.2	3.5e-47
WP_106641634.1|1725285_1726152_-	DNA-binding protein	NA	A0A1P8DTF2	Proteus_phage	33.2	2.0e-26
WP_106641635.1|1726155_1727118_-	endonuclease	NA	I4AZN3	Saccharomonospora_phage	28.5	2.6e-24
WP_106641809.1|1727269_1727917_-	molecular chaperone GrpE	NA	NA	NA	NA	NA
WP_106641636.1|1728090_1728312_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_106641637.1|1728304_1729069_-	phage antirepressor Ant	NA	I3NLD0	Bifidobacterium_phage	66.4	8.1e-93
WP_003830479.1|1729281_1729491_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641638.1|1729487_1729970_-	class I SAM-dependent methyltransferase	NA	A8ATY8	Listeria_phage	57.8	2.0e-49
WP_106641639.1|1729990_1730197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157826257.1|1730655_1731048_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106641641.1|1731093_1731411_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106641642.1|1731430_1731676_-	helix-turn-helix transcriptional regulator	NA	I3NLD2	Bifidobacterium_phage	87.2	5.0e-28
WP_106641643.1|1731802_1732195_+	hypothetical protein	NA	I3NLD3	Bifidobacterium_phage	93.0	4.2e-29
WP_157826258.1|1732207_1732771_+	DUF4236 domain-containing protein	NA	NA	NA	NA	NA
WP_106641810.1|1732865_1733246_+	ImmA/IrrE family metallo-endopeptidase	NA	I3NLD5	Bifidobacterium_phage	79.8	8.2e-54
