assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	1	1217219-1217463	1	PILER-CR	no		csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Orphan	GTCCACCTGCTCGGCCGGGTCGAGCGGGAAGGCATCCTCCGCATCGGG	48	0	0	NA	NA	NA	2	2	Orphan	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|92aa|up_8|NZ_CP020370.1_1206524_1206800_+,NA|110aa|up_5|NZ_CP020370.1_1208795_1209125_+,NA|155aa|up_4|NZ_CP020370.1_1209193_1209658_-,NA|184aa|up_1|NZ_CP020370.1_1213692_1214244_-,NA|161aa|down_0|NZ_CP020370.1_1220125_1220608_-,NA|81aa|down_6|NZ_CP020370.1_1226267_1226510_+,NA|87aa|down_8|NZ_CP020370.1_1226831_1227092_+,NA|105aa|down_9|NZ_CP020370.1_1227887_1228202_+	NA|94aa|up_9|NZ_CP020370.1_1205784_1206066_+	pfam13020, DUF3883, Domain of unknown function (DUF3883)	NA|92aa|up_8|NZ_CP020370.1_1206524_1206800_+	NA	NA|112aa|up_7|NZ_CP020370.1_1206853_1207189_+	pfam03235, DUF262, Protein of unknown function DUF262	NA|468aa|up_6|NZ_CP020370.1_1207193_1208597_+	pfam07510, DUF1524, Protein of unknown function (DUF1524)	NA|110aa|up_5|NZ_CP020370.1_1208795_1209125_+	NA	NA|155aa|up_4|NZ_CP020370.1_1209193_1209658_-	NA	NA|164aa|up_3|NZ_CP020370.1_1210050_1210542_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|847aa|up_2|NZ_CP020370.1_1210793_1213334_-	TIGR03788, marine_srt_targ, marine proteobacterial sortase target protein	NA|184aa|up_1|NZ_CP020370.1_1213692_1214244_-	NA	NA|625aa|up_0|NZ_CP020370.1_1214341_1216216_-	sd00002, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat	NA|161aa|down_0|NZ_CP020370.1_1220125_1220608_-	NA	NA|294aa|down_1|NZ_CP020370.1_1220604_1221486_-	PRK05993, PRK05993, SDR family oxidoreductase	NA|112aa|down_2|NZ_CP020370.1_1221829_1222165_+	TIGR02605, CxxC_CxxC_SSSS, putative regulatory protein, FmdB family	NA|593aa|down_3|NZ_CP020370.1_1222602_1224381_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|189aa|down_4|NZ_CP020370.1_1224391_1224958_+	PRK09438, nudB, dihydroneopterin triphosphate pyrophosphatase; Provisional	NA|335aa|down_5|NZ_CP020370.1_1225139_1226144_+	pfam00685, Sulfotransfer_1, Sulfotransferase domain	NA|81aa|down_6|NZ_CP020370.1_1226267_1226510_+	NA	NA|61aa|down_7|NZ_CP020370.1_1226506_1226689_+	COG2402, COG2402, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|87aa|down_8|NZ_CP020370.1_1226831_1227092_+	NA	NA|105aa|down_9|NZ_CP020370.1_1227887_1228202_+	NA
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	2	1492350-1492450	1	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Orphan	CCCCTGCGATTGCGGAGCCGCAAACA	26	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|293aa|up_0|NZ_CP020370.1_1490240_1491119_-,NA|299aa|down_0|NZ_CP020370.1_1493329_1494226_-,NA|123aa|down_1|NZ_CP020370.1_1494482_1494851_+,NA|65aa|down_3|NZ_CP020370.1_1496524_1496719_-	NA|386aa|up_9|NZ_CP020370.1_1473921_1475079_+	pfam04986, Y2_Tnp, Putative transposase	NA|72aa|up_8|NZ_CP020370.1_1475593_1475809_+	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain	NA|1023aa|up_7|NZ_CP020370.1_1476424_1479493_+	cd17247, RMtype1_S_Eco2747I-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Escherichia coli ST2747 S subunit (S	NA|801aa|up_6|NZ_CP020370.1_1479495_1481898_+	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|924aa|up_5|NZ_CP020370.1_1482029_1484801_-	PRK14849, PRK14849, autotransporter barrel domain-containing lipoprotein	NA|155aa|up_4|NZ_CP020370.1_1484818_1485283_+	TIGR01426, Glycosyl_transferase, glycosyltransferase, MGT family	NA|412aa|up_3|NZ_CP020370.1_1486132_1487368_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|236aa|up_2|NZ_CP020370.1_1487360_1488068_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|699aa|up_1|NZ_CP020370.1_1488078_1490175_-	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|293aa|up_0|NZ_CP020370.1_1490240_1491119_-	NA	NA|299aa|down_0|NZ_CP020370.1_1493329_1494226_-	NA	NA|123aa|down_1|NZ_CP020370.1_1494482_1494851_+	NA	NA|550aa|down_2|NZ_CP020370.1_1494847_1496497_+	COG1262, COG1262, Uncharacterized conserved protein [Function unknown]	NA|65aa|down_3|NZ_CP020370.1_1496524_1496719_-	NA	NA|529aa|down_4|NZ_CP020370.1_1497059_1498646_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|283aa|down_5|NZ_CP020370.1_1498785_1499634_-	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|207aa|down_6|NZ_CP020370.1_1499646_1500267_-	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin	NA|411aa|down_7|NZ_CP020370.1_1500475_1501708_+	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]	NA|439aa|down_8|NZ_CP020370.1_1502033_1503350_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|105aa|down_9|NZ_CP020370.1_1503365_1503680_+	pfam13676, TIR_2, TIR domain
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	3	1737437-1737568	2	CRISPRCasFinder	no	cas3	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Unclear	TTGTCCCACCCACCGCGGCGGGACGGGGCATTCGCCCCGTCCCG	44	0	0	NA	NA	NA	1	1	Unclear	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|337aa|up_9|NZ_CP020370.1_1726381_1727392_+,NA|137aa|up_6|NZ_CP020370.1_1728922_1729333_-,NA|150aa|up_0|NZ_CP020370.1_1736935_1737385_+,NA	NA|337aa|up_9|NZ_CP020370.1_1726381_1727392_+	NA	NA|176aa|up_8|NZ_CP020370.1_1727777_1728305_-	pfam10986, DUF2796, Protein of unknown function (DUF2796)	NA|185aa|up_7|NZ_CP020370.1_1728347_1728902_-	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif	NA|137aa|up_6|NZ_CP020370.1_1728922_1729333_-	NA	NA|473aa|up_5|NZ_CP020370.1_1729329_1730748_-	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General    function prediction only]	NA|163aa|up_4|NZ_CP020370.1_1730907_1731396_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|180aa|up_3|NZ_CP020370.1_1731670_1732210_-	COG2716, GcvR, Glycine cleavage system regulatory protein [Amino acid transport and metabolism]	NA|198aa|up_2|NZ_CP020370.1_1732553_1733147_-	TIGR02605, CxxC_CxxC_SSSS, putative regulatory protein, FmdB family	NA|1165aa|up_1|NZ_CP020370.1_1733345_1736840_+	pfam04892, VanZ, VanZ like family	NA|150aa|up_0|NZ_CP020370.1_1736935_1737385_+	NA	NA|77aa|down_0|NZ_CP020370.1_1737755_1737986_+	pfam10047, DUF2281, Protein of unknown function (DUF2281)	NA|369aa|down_1|NZ_CP020370.1_1737982_1739089_+	cd03879, M28_AAP, M28 Zn-peptidase Aeromonas (Vibrio) proteolytica aminopeptidase	NA|559aa|down_2|NZ_CP020370.1_1739263_1740940_+	cd00569, HTH_Hin_like, Helix-turn-helix domain of Hin and related proteins	NA|103aa|down_3|NZ_CP020370.1_1741010_1741319_+	cd05640, M28_like, M28 Zn-peptidase; uncharacterized subfamily	NA|330aa|down_4|NZ_CP020370.1_1741526_1742516_-	cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor	NA|135aa|down_5|NZ_CP020370.1_1742923_1743328_+	COG1569, COG1569, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	cas3|811aa|down_6|NZ_CP020370.1_1743380_1745813_+	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|105aa|down_7|NZ_CP020370.1_1745890_1746205_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|433aa|down_8|NZ_CP020370.1_1746229_1747528_+	pfam13482, RNase_H_2, RNase_H superfamily	NA|613aa|down_9|NZ_CP020370.1_1747699_1749538_+	COG2192, COG2192, Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones]
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	4	1741440-1741523	3	CRISPRCasFinder	no	cas3	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Unclear	GGGCGCATGCCCCGTCCGGCGCGG	24	0	0	NA	NA	NA	1	1	Unclear	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|150aa|up_4|NZ_CP020370.1_1736935_1737385_+,NA|197aa|down_6|NZ_CP020370.1_1749675_1750266_+,NA|181aa|down_7|NZ_CP020370.1_1750281_1750824_-,NA|154aa|down_9|NZ_CP020370.1_1752230_1752692_-	NA|473aa|up_9|NZ_CP020370.1_1729329_1730748_-	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General    function prediction only]	NA|163aa|up_8|NZ_CP020370.1_1730907_1731396_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|180aa|up_7|NZ_CP020370.1_1731670_1732210_-	COG2716, GcvR, Glycine cleavage system regulatory protein [Amino acid transport and metabolism]	NA|198aa|up_6|NZ_CP020370.1_1732553_1733147_-	TIGR02605, CxxC_CxxC_SSSS, putative regulatory protein, FmdB family	NA|1165aa|up_5|NZ_CP020370.1_1733345_1736840_+	pfam04892, VanZ, VanZ like family	NA|150aa|up_4|NZ_CP020370.1_1736935_1737385_+	NA	NA|77aa|up_3|NZ_CP020370.1_1737755_1737986_+	pfam10047, DUF2281, Protein of unknown function (DUF2281)	NA|369aa|up_2|NZ_CP020370.1_1737982_1739089_+	cd03879, M28_AAP, M28 Zn-peptidase Aeromonas (Vibrio) proteolytica aminopeptidase	NA|559aa|up_1|NZ_CP020370.1_1739263_1740940_+	cd00569, HTH_Hin_like, Helix-turn-helix domain of Hin and related proteins	NA|103aa|up_0|NZ_CP020370.1_1741010_1741319_+	cd05640, M28_like, M28 Zn-peptidase; uncharacterized subfamily	NA|330aa|down_0|NZ_CP020370.1_1741526_1742516_-	cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor	NA|135aa|down_1|NZ_CP020370.1_1742923_1743328_+	COG1569, COG1569, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	cas3|811aa|down_2|NZ_CP020370.1_1743380_1745813_+	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|105aa|down_3|NZ_CP020370.1_1745890_1746205_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|433aa|down_4|NZ_CP020370.1_1746229_1747528_+	pfam13482, RNase_H_2, RNase_H superfamily	NA|613aa|down_5|NZ_CP020370.1_1747699_1749538_+	COG2192, COG2192, Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones]	NA|197aa|down_6|NZ_CP020370.1_1749675_1750266_+	NA	NA|181aa|down_7|NZ_CP020370.1_1750281_1750824_-	NA	NA|202aa|down_8|NZ_CP020370.1_1751054_1751660_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|154aa|down_9|NZ_CP020370.1_1752230_1752692_-	NA
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	5	1879131-1881639	2,4,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,csb2gr5,cas7	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Unclear	GCTTCAATGAGGCCGCGGCGAATTCGCCGCG--------GAAAC,GCTTCAATGAGGCCGCGGCGAATTCGCCGCGGAAAC,GCTTCAATGAGGCCGCGGCGAATTCGCCGCGGAAAC	44,36,36	0	0	NA	NA	NA:NA:NA	34,34,34	34	Unclear	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|475aa|up_4|NZ_CP020370.1_1871309_1872734_+,NA|69aa|up_3|NZ_CP020370.1_1873076_1873283_+,NA|146aa|up_1|NZ_CP020370.1_1876519_1876957_-,NA|572aa|down_0|NZ_CP020370.1_1881860_1883576_+,NA|85aa|down_9|NZ_CP020370.1_1906733_1906988_-	NA|715aa|up_9|NZ_CP020370.1_1864906_1867051_-	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|382aa|up_8|NZ_CP020370.1_1867406_1868552_+	cd14727, ChanN-like, ChaN is an iron-regulated, heme-binding protein	NA|272aa|up_7|NZ_CP020370.1_1868645_1869461_+	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|129aa|up_6|NZ_CP020370.1_1869737_1870124_-	pfam12616, DUF3775, Protein of unknown function (DUF3775)	NA|268aa|up_5|NZ_CP020370.1_1870342_1871146_+	cd07331, M48C_Oma1_like, Peptidase M48C, integral membrane endopeptidase	NA|475aa|up_4|NZ_CP020370.1_1871309_1872734_+	NA	NA|69aa|up_3|NZ_CP020370.1_1873076_1873283_+	NA	NA|1034aa|up_2|NZ_CP020370.1_1873315_1876417_-	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|146aa|up_1|NZ_CP020370.1_1876519_1876957_-	NA	NA|529aa|up_0|NZ_CP020370.1_1877234_1878821_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|572aa|down_0|NZ_CP020370.1_1881860_1883576_+	NA	cas2|98aa|down_1|NZ_CP020370.1_1894525_1894819_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|584aa|down_2|NZ_CP020370.1_1895256_1897008_-	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	csb2gr5|733aa|down_3|NZ_CP020370.1_1897861_1900060_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	cas7|380aa|down_4|NZ_CP020370.1_1900062_1901202_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	cas8u2|312aa|down_5|NZ_CP020370.1_1901198_1902134_-	TIGR04106, hypothetical_protein_GobsU_11505, CRISPR-associated protein GSU0052/csb3, Dpsyc system	cas3|953aa|down_6|NZ_CP020370.1_1902130_1904989_-	cd09696, Cas3_I, CRISPR/Cas system-associated protein Cas3; Distinct Cas3 family with HD domain fused to C-termus of Helicase domain	NA|281aa|down_7|NZ_CP020370.1_1904985_1905828_-	TIGR02613, cell_filamentation_protein, mobile mystery protein B	NA|139aa|down_8|NZ_CP020370.1_1906027_1906444_-	pfam13470, PIN_3, PIN domain	NA|85aa|down_9|NZ_CP020370.1_1906733_1906988_-	NA
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	6	1883646-1894325	3,5,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,csb2gr5,cas7,cas8u2,cas3,WYL	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Unclear	GCTTCAATGAGGCCGCGGCGAATTCGCCGCG--------GAAAC,GCTTCAATGAGGCCGCGGCGAATTCGCCGCGGAAAC,GCTTCAATGAGGCCGCGGCGAATTCGCCGCGGAAAC	44,36,36	0	0	NA	NA	NA:NA:NA	146,146,146	146	Unclear	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|475aa|up_5|NZ_CP020370.1_1871309_1872734_+,NA|69aa|up_4|NZ_CP020370.1_1873076_1873283_+,NA|146aa|up_2|NZ_CP020370.1_1876519_1876957_-,NA|572aa|up_0|NZ_CP020370.1_1881860_1883576_+,NA|85aa|down_8|NZ_CP020370.1_1906733_1906988_-,NA|72aa|down_9|NZ_CP020370.1_1907297_1907513_+	NA|382aa|up_9|NZ_CP020370.1_1867406_1868552_+	cd14727, ChanN-like, ChaN is an iron-regulated, heme-binding protein	NA|272aa|up_8|NZ_CP020370.1_1868645_1869461_+	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|129aa|up_7|NZ_CP020370.1_1869737_1870124_-	pfam12616, DUF3775, Protein of unknown function (DUF3775)	NA|268aa|up_6|NZ_CP020370.1_1870342_1871146_+	cd07331, M48C_Oma1_like, Peptidase M48C, integral membrane endopeptidase	NA|475aa|up_5|NZ_CP020370.1_1871309_1872734_+	NA	NA|69aa|up_4|NZ_CP020370.1_1873076_1873283_+	NA	NA|1034aa|up_3|NZ_CP020370.1_1873315_1876417_-	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|146aa|up_2|NZ_CP020370.1_1876519_1876957_-	NA	NA|529aa|up_1|NZ_CP020370.1_1877234_1878821_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|572aa|up_0|NZ_CP020370.1_1881860_1883576_+	NA	cas2|98aa|down_0|NZ_CP020370.1_1894525_1894819_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|584aa|down_1|NZ_CP020370.1_1895256_1897008_-	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	csb2gr5|733aa|down_2|NZ_CP020370.1_1897861_1900060_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	cas7|380aa|down_3|NZ_CP020370.1_1900062_1901202_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	cas8u2|312aa|down_4|NZ_CP020370.1_1901198_1902134_-	TIGR04106, hypothetical_protein_GobsU_11505, CRISPR-associated protein GSU0052/csb3, Dpsyc system	cas3|953aa|down_5|NZ_CP020370.1_1902130_1904989_-	cd09696, Cas3_I, CRISPR/Cas system-associated protein Cas3; Distinct Cas3 family with HD domain fused to C-termus of Helicase domain	NA|281aa|down_6|NZ_CP020370.1_1904985_1905828_-	TIGR02613, cell_filamentation_protein, mobile mystery protein B	NA|139aa|down_7|NZ_CP020370.1_1906027_1906444_-	pfam13470, PIN_3, PIN domain	NA|85aa|down_8|NZ_CP020370.1_1906733_1906988_-	NA	NA|72aa|down_9|NZ_CP020370.1_1907297_1907513_+	NA
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	7	2547913-2548001	6	CRISPRCasFinder	no	DEDDh	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Unclear	GGGCGTCCCGCCCGCGCGCGGGCAGGAT	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|314aa|up_9|NZ_CP020370.1_2535199_2536141_-,NA|267aa|up_6|NZ_CP020370.1_2537844_2538645_-,NA|630aa|down_0|NZ_CP020370.1_2548031_2549921_+,NA|71aa|down_1|NZ_CP020370.1_2550084_2550297_+,NA|176aa|down_2|NZ_CP020370.1_2550301_2550829_+,NA|68aa|down_5|NZ_CP020370.1_2556406_2556610_+,NA|133aa|down_8|NZ_CP020370.1_2561453_2561852_-,NA|572aa|down_9|NZ_CP020370.1_2562097_2563813_+	NA|314aa|up_9|NZ_CP020370.1_2535199_2536141_-	NA	NA|358aa|up_8|NZ_CP020370.1_2536137_2537211_-	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain	DEDDh|202aa|up_7|NZ_CP020370.1_2537249_2537855_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|267aa|up_6|NZ_CP020370.1_2537844_2538645_-	NA	NA|376aa|up_5|NZ_CP020370.1_2538691_2539819_-	PRK13009, PRK13009, succinyl-diaminopimelate desuccinylase; Reviewed	NA|115aa|up_4|NZ_CP020370.1_2539818_2540163_-	cd03035, ArsC_Yffb, Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC	NA|274aa|up_3|NZ_CP020370.1_2540417_2541239_-	PRK11830, dapD, 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional	NA|399aa|up_2|NZ_CP020370.1_2541430_2542627_-	PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional	NA|1149aa|up_1|NZ_CP020370.1_2542852_2546299_+	pfam04257, Exonuc_V_gamma, Exodeoxyribonuclease V, gamma subunit	NA|390aa|up_0|NZ_CP020370.1_2546663_2547833_+	pfam13676, TIR_2, TIR domain	NA|630aa|down_0|NZ_CP020370.1_2548031_2549921_+	NA	NA|71aa|down_1|NZ_CP020370.1_2550084_2550297_+	NA	NA|176aa|down_2|NZ_CP020370.1_2550301_2550829_+	NA	NA|1452aa|down_3|NZ_CP020370.1_2551335_2555691_+	pfam12770, CHAT, CHAT domain	NA|151aa|down_4|NZ_CP020370.1_2555957_2556410_+	cd09874, PIN_MT3492-like, VapC-like PIN domain of the hypothetical protein MT3492 of Mycobacterium tuberculosis CDC1551 and other uncharacterized, annotated PilT protein domain proteins	NA|68aa|down_5|NZ_CP020370.1_2556406_2556610_+	NA	NA|95aa|down_6|NZ_CP020370.1_2557266_2557551_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|1266aa|down_7|NZ_CP020370.1_2557638_2561436_+	PRK10876, recB, exonuclease V subunit beta; Provisional	NA|133aa|down_8|NZ_CP020370.1_2561453_2561852_-	NA	NA|572aa|down_9|NZ_CP020370.1_2562097_2563813_+	NA
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	8	2573238-2573508	7	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Orphan	GTTGCACGACCAGTTGCACGCAGAGTTGTACCGGTGGTTGCAC	43	0	0	NA	NA	NA	3	3	Orphan	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|133aa|up_9|NZ_CP020370.1_2561453_2561852_-,NA|572aa|up_8|NZ_CP020370.1_2562097_2563813_+,NA|128aa|up_7|NZ_CP020370.1_2563799_2564183_-,NA|69aa|up_6|NZ_CP020370.1_2564206_2564413_-,NA|586aa|up_5|NZ_CP020370.1_2564675_2566433_+,NA|372aa|up_3|NZ_CP020370.1_2567465_2568581_-,NA|163aa|down_0|NZ_CP020370.1_2573815_2574304_+,NA|181aa|down_3|NZ_CP020370.1_2576643_2577186_+	NA|133aa|up_9|NZ_CP020370.1_2561453_2561852_-	NA	NA|572aa|up_8|NZ_CP020370.1_2562097_2563813_+	NA	NA|128aa|up_7|NZ_CP020370.1_2563799_2564183_-	NA	NA|69aa|up_6|NZ_CP020370.1_2564206_2564413_-	NA	NA|586aa|up_5|NZ_CP020370.1_2564675_2566433_+	NA	NA|282aa|up_4|NZ_CP020370.1_2566664_2567510_+	PHA03379, PHA03379, EBNA-3A; Provisional	NA|372aa|up_3|NZ_CP020370.1_2567465_2568581_-	NA	NA|466aa|up_2|NZ_CP020370.1_2568711_2570109_+	pfam13546, DDE_5, DDE superfamily endonuclease	NA|196aa|up_1|NZ_CP020370.1_2570136_2570724_-	pfam00450, Peptidase_S10, Serine carboxypeptidase	NA|482aa|up_0|NZ_CP020370.1_2571494_2572940_+	COG0641, AslB, Arylsulfatase regulator (Fe-S oxidoreductase) [General function prediction only]	NA|163aa|down_0|NZ_CP020370.1_2573815_2574304_+	NA	NA|384aa|down_1|NZ_CP020370.1_2574501_2575653_+	TIGR02660, Homocitrate_synthase, homocitrate synthase NifV	NA|261aa|down_2|NZ_CP020370.1_2575858_2576641_+	TIGR01172, Serine_acetyltransferase, serine O-acetyltransferase	NA|181aa|down_3|NZ_CP020370.1_2576643_2577186_+	NA	NA|115aa|down_4|NZ_CP020370.1_2577247_2577592_+	pfam03206, NifW, Nitrogen fixation protein NifW	NA|152aa|down_5|NZ_CP020370.1_2577575_2578031_+	pfam04319, NifZ, NifZ domain	NA|322aa|down_6|NZ_CP020370.1_2578264_2579230_+	TIGR02933, Putative_peptidyl-prolyl_cis-trans_isomerase_NifM, nitrogen fixation protein NifM	NA|427aa|down_7|NZ_CP020370.1_2579226_2580507_+	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|252aa|down_8|NZ_CP020370.1_2580665_2581421_-	cd12927, MMP_TTHA0227_like, Minimal MMP-like domain found in Thermus thermophilus TTHA0227, Acidothermus cellulolyticus ACEL2062 and similar proteins	NA|667aa|down_9|NZ_CP020370.1_2581479_2583480_-	pfam03235, DUF262, Protein of unknown function DUF262
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	9	3010754-3010871	8	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Orphan	CCAAGGCCGCGGGGGCCATGCTCGGCGGCGGTGC	34	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|307aa|up_1|NZ_CP020370.1_3008591_3009512_-,NA|256aa|up_0|NZ_CP020370.1_3009694_3010462_+,NA|76aa|down_3|NZ_CP020370.1_3016442_3016670_-,NA|84aa|down_4|NZ_CP020370.1_3016882_3017134_-,NA|80aa|down_6|NZ_CP020370.1_3019133_3019373_-,NA|202aa|down_7|NZ_CP020370.1_3020113_3020719_+	NA|84aa|up_9|NZ_CP020370.1_3001365_3001617_+	pfam08808, RES, RES domain	NA|149aa|up_8|NZ_CP020370.1_3001707_3002154_+	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family	NA|157aa|up_7|NZ_CP020370.1_3002150_3002621_+	COG5654, COG5654, Uncharacterized conserved protein [Function unknown]	NA|448aa|up_6|NZ_CP020370.1_3002777_3004121_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|287aa|up_5|NZ_CP020370.1_3004217_3005078_-	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|295aa|up_4|NZ_CP020370.1_3005289_3006174_-	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional	NA|129aa|up_3|NZ_CP020370.1_3006586_3006973_+	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|364aa|up_2|NZ_CP020370.1_3007317_3008409_+	PRK10760, PRK10760, murein hydrolase B; Provisional	NA|307aa|up_1|NZ_CP020370.1_3008591_3009512_-	NA	NA|256aa|up_0|NZ_CP020370.1_3009694_3010462_+	NA	NA|434aa|down_0|NZ_CP020370.1_3011989_3013291_+	cd06114, EcCS_like, Escherichia coli (Ec) citrate synthase (CS) GltA_like	NA|329aa|down_1|NZ_CP020370.1_3013300_3014287_+	PRK05330, PRK05330, oxygen-dependent coproporphyrinogen oxidase	NA|638aa|down_2|NZ_CP020370.1_3014447_3016361_+	PRK15319, PRK15319, fibronectin-binding autotransporter adhesin ShdA	NA|76aa|down_3|NZ_CP020370.1_3016442_3016670_-	NA	NA|84aa|down_4|NZ_CP020370.1_3016882_3017134_-	NA	NA|535aa|down_5|NZ_CP020370.1_3017370_3018975_-	cd07571, ALP_N-acyl_transferase, Apolipoprotein N-acyl transferase (class 9 nitrilases)	NA|80aa|down_6|NZ_CP020370.1_3019133_3019373_-	NA	NA|202aa|down_7|NZ_CP020370.1_3020113_3020719_+	NA	NA|180aa|down_8|NZ_CP020370.1_3020797_3021337_-	COG3260, COG3260, Ni,Fe-hydrogenase III small subunit [Energy production and conversion]	NA|549aa|down_9|NZ_CP020370.1_3021784_3023431_-	COG3261, HycE, Ni,Fe-hydrogenase III large subunit [Energy production and conversion]
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	10	3219282-3219389	9	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Orphan	GGGCGCGGGTCCGCACAGCGGACCCT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|73aa|up_9|NZ_CP020370.1_3208331_3208550_+,NA|203aa|down_9|NZ_CP020370.1_3233250_3233859_-	NA|73aa|up_9|NZ_CP020370.1_3208331_3208550_+	NA	NA|446aa|up_8|NZ_CP020370.1_3208743_3210081_-	COG5368, COG5368, Uncharacterized protein conserved in bacteria [Function unknown]	NA|191aa|up_7|NZ_CP020370.1_3210179_3210752_-	pfam04832, SOUL, SOUL heme-binding protein	NA|203aa|up_6|NZ_CP020370.1_3211234_3211843_+	pfam16884, ADH_N_2, N-terminal domain of oxidoreductase	NA|481aa|up_5|NZ_CP020370.1_3211912_3213355_+	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]	NA|440aa|up_4|NZ_CP020370.1_3213351_3214671_+	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]	NA|85aa|up_3|NZ_CP020370.1_3214695_3214950_+	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|147aa|up_2|NZ_CP020370.1_3214946_3215387_+	cd18692, PIN_VapC-like, uncharacterized subfamily of the VapC-like nuclease family of the PIN domain superfamily	NA|293aa|up_1|NZ_CP020370.1_3215687_3216566_-	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|865aa|up_0|NZ_CP020370.1_3216562_3219157_-	pfam14403, CP_ATPgrasp_2, Circularly permuted ATP-grasp type 2	NA|1564aa|down_0|NZ_CP020370.1_3219912_3224604_-	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|174aa|down_1|NZ_CP020370.1_3224713_3225235_-	COG4726, PilX, Tfp pilus assembly protein PilX [Cell motility and secretion / Intracellular trafficking and secretion]	NA|387aa|down_2|NZ_CP020370.1_3225231_3226392_-	pfam16074, PilW, Type IV Pilus-assembly protein W	NA|200aa|down_3|NZ_CP020370.1_3226388_3226988_-	TIGR02523, probable_type-4_fimbrial_biogenesis_protein, type IV pilus modification protein PilV	NA|179aa|down_4|NZ_CP020370.1_3226984_3227521_-	COG4970, FimT, Tfp pilus assembly protein FimT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|693aa|down_5|NZ_CP020370.1_3227933_3230012_-	pfam00563, EAL, EAL domain	NA|341aa|down_6|NZ_CP020370.1_3230376_3231399_-	TIGR03821, EFP_modif_epmB, EF-P beta-lysylation protein EpmB	NA|190aa|down_7|NZ_CP020370.1_3231433_3232003_+	PRK00529, PRK00529, elongation factor P; Validated	NA|335aa|down_8|NZ_CP020370.1_3232219_3233224_+	TIGR00462, genX, EF-P lysine aminoacylase GenX	NA|203aa|down_9|NZ_CP020370.1_3233250_3233859_-	NA
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	11	3622986-3623089	10	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Orphan	GTCCGCGCAGCGGACCCTACGGGCGGCC	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|289aa|up_8|NZ_CP020370.1_3612619_3613486_+,NA|63aa|up_0|NZ_CP020370.1_3622515_3622704_-,NA|381aa|down_0|NZ_CP020370.1_3623374_3624517_+	NA|293aa|up_9|NZ_CP020370.1_3611698_3612577_+	cd13964, PT_UbiA_1, UbiA family of prenyltransferases (PTases), Unknown subgroup	NA|289aa|up_8|NZ_CP020370.1_3612619_3613486_+	NA	NA|294aa|up_7|NZ_CP020370.1_3613578_3614460_+	COG1099, COG1099, Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]	NA|414aa|up_6|NZ_CP020370.1_3614431_3615673_+	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel	NA|465aa|up_5|NZ_CP020370.1_3615731_3617126_+	pfam01663, Phosphodiest, Type I phosphodiesterase / nucleotide pyrophosphatase	NA|1136aa|up_4|NZ_CP020370.1_3617154_3620562_-	cd06598, GH31_transferase_CtsZ, CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z)-like	NA|79aa|up_3|NZ_CP020370.1_3621255_3621492_+	pfam07798, DUF1640, Protein of unknown function (DUF1640)	NA|125aa|up_2|NZ_CP020370.1_3621631_3622006_+	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins	NA|140aa|up_1|NZ_CP020370.1_3621998_3622418_+	pfam05168, HEPN, HEPN domain	NA|63aa|up_0|NZ_CP020370.1_3622515_3622704_-	NA	NA|381aa|down_0|NZ_CP020370.1_3623374_3624517_+	NA	NA|558aa|down_1|NZ_CP020370.1_3625176_3626850_+	pfam13191, AAA_16, AAA ATPase domain	NA|81aa|down_2|NZ_CP020370.1_3627363_3627606_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|111aa|down_3|NZ_CP020370.1_3627608_3627941_+	PRK09907, PRK09907, endoribonuclease MazF	NA|303aa|down_4|NZ_CP020370.1_3627955_3628864_-	PRK10507, PRK10507, bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase; Provisional	NA|84aa|down_5|NZ_CP020370.1_3628965_3629217_-	PRK11347, PRK11347, antitoxin ChpS; Provisional	NA|313aa|down_6|NZ_CP020370.1_3629695_3630634_+	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|196aa|down_7|NZ_CP020370.1_3630710_3631298_-	cd06260, DUF820, Domain of unknown function (DUF820)	NA|248aa|down_8|NZ_CP020370.1_3631391_3632135_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|283aa|down_9|NZ_CP020370.1_3632141_3632990_-	cd17551, REC_RpfG-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase response regulator RpfG and similar proteins
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	12	3857466-3857568	11	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Orphan	CCCTCCTCGCCGTCGGTGCGGGTGC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|256aa|up_6|NZ_CP020370.1_3848833_3849601_+,NA|305aa|up_5|NZ_CP020370.1_3849847_3850762_-,NA|57aa|up_2|NZ_CP020370.1_3854700_3854871_+,NA	NA|256aa|up_9|NZ_CP020370.1_3841417_3842185_-	COG1058, CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]	NA|1916aa|up_8|NZ_CP020370.1_3842392_3848140_+	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD	NA|181aa|up_7|NZ_CP020370.1_3848262_3848805_+	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|256aa|up_6|NZ_CP020370.1_3848833_3849601_+	NA	NA|305aa|up_5|NZ_CP020370.1_3849847_3850762_-	NA	NA|609aa|up_4|NZ_CP020370.1_3850890_3852717_-	cd01115, SLC13_permease, Permease SLC13 (solute carrier 13)	NA|228aa|up_3|NZ_CP020370.1_3853121_3853805_-	PRK11111, PRK11111, YchE family NAAT transporter	NA|57aa|up_2|NZ_CP020370.1_3854700_3854871_+	NA	NA|93aa|up_1|NZ_CP020370.1_3855298_3855577_-	pfam07885, Ion_trans_2, Ion channel	NA|231aa|up_0|NZ_CP020370.1_3855846_3856539_+	pfam14261, DUF4351, Domain of unknown function (DUF4351)	NA|283aa|down_0|NZ_CP020370.1_3859041_3859890_-	COG4916, COG4916, Uncharacterized protein containing a TIR (Toll-Interleukin 1-resistance) domain [Function unknown]	NA|258aa|down_1|NZ_CP020370.1_3859886_3860660_-	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair]	NA|132aa|down_2|NZ_CP020370.1_3860838_3861234_-	COG3215, PilZ, Tfp pilus assembly protein PilZ [Cell motility and secretion / Intracellular trafficking and secretion]	NA|346aa|down_3|NZ_CP020370.1_3861233_3862271_-	PRK05707, PRK05707, DNA polymerase III subunit delta'; Validated	NA|220aa|down_4|NZ_CP020370.1_3862263_3862923_-	PRK00698, tmk, thymidylate kinase; Validated	NA|333aa|down_5|NZ_CP020370.1_3863315_3864314_-	COG1559, COG1559, Aminodeoxychorismate lyase [Coenzyme transport and metabolism]	NA|301aa|down_6|NZ_CP020370.1_3864310_3865213_-	PRK06092, PRK06092, 4-amino-4-deoxychorismate lyase; Reviewed	NA|413aa|down_7|NZ_CP020370.1_3865451_3866690_-	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|79aa|down_8|NZ_CP020370.1_3866788_3867025_-	PRK00982, acpP, acyl carrier protein; Provisional	NA|247aa|down_9|NZ_CP020370.1_3867174_3867915_-	TIGR01830, 3-oxoacyl-_reductase_FabG, 3-oxoacyl-(acyl-carrier-protein) reductase
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	13	3975708-3975819	12	CRISPRCasFinder	no	cas3	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Unclear	GGCGGACGACCCCAACGGGGTCGAACCTACCAGCCCAG	38	0	0	NA	NA	NA	1	1	Unclear	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|373aa|up_9|NZ_CP020370.1_3959905_3961024_-,NA|145aa|up_4|NZ_CP020370.1_3967412_3967847_+,NA|210aa|up_2|NZ_CP020370.1_3971042_3971672_+,NA|88aa|up_1|NZ_CP020370.1_3971888_3972152_-,NA|88aa|down_1|NZ_CP020370.1_3976694_3976958_-,NA|149aa|down_2|NZ_CP020370.1_3977404_3977851_+,NA|69aa|down_3|NZ_CP020370.1_3977974_3978181_-,NA|90aa|down_5|NZ_CP020370.1_3979642_3979912_-	NA|373aa|up_9|NZ_CP020370.1_3959905_3961024_-	NA	NA|371aa|up_8|NZ_CP020370.1_3961280_3962393_-	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases	cas3|1170aa|up_7|NZ_CP020370.1_3962859_3966369_+	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]	NA|102aa|up_6|NZ_CP020370.1_3966653_3966959_+	pfam03683, UPF0175, Uncharacterized protein family (UPF0175)	NA|76aa|up_5|NZ_CP020370.1_3966951_3967179_+	COG2405, COG2405, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|145aa|up_4|NZ_CP020370.1_3967412_3967847_+	NA	NA|1003aa|up_3|NZ_CP020370.1_3967947_3970956_+	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|210aa|up_2|NZ_CP020370.1_3971042_3971672_+	NA	NA|88aa|up_1|NZ_CP020370.1_3971888_3972152_-	NA	NA|1029aa|up_0|NZ_CP020370.1_3972469_3975556_+	pfam13424, TPR_12, Tetratricopeptide repeat	NA|134aa|down_0|NZ_CP020370.1_3976291_3976693_-	cd09871, PIN_MtVapC28-VapC30-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC28 and 30 and related proteins	NA|88aa|down_1|NZ_CP020370.1_3976694_3976958_-	NA	NA|149aa|down_2|NZ_CP020370.1_3977404_3977851_+	NA	NA|69aa|down_3|NZ_CP020370.1_3977974_3978181_-	NA	NA|341aa|down_4|NZ_CP020370.1_3978472_3979495_-	pfam12770, CHAT, CHAT domain	NA|90aa|down_5|NZ_CP020370.1_3979642_3979912_-	NA	NA|180aa|down_6|NZ_CP020370.1_3980180_3980720_-	pfam07152, YaeQ, YaeQ protein	NA|220aa|down_7|NZ_CP020370.1_3980719_3981379_-	PRK09289, PRK09289, riboflavin synthase	NA|373aa|down_8|NZ_CP020370.1_3981617_3982736_-	PRK10786, ribD, bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA|172aa|down_9|NZ_CP020370.1_3982771_3983287_-	PRK00464, nrdR, transcriptional repressor NrdR
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	14	4626522-4629249	4,13,3	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7b,cas4,cas1,cas2	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Type I-C, Type I-U?,Type I-U	GCATCGCCCGGCCAATTGGCCGGGCGCGGATTGAAAC,GCATCGCCCGGCCAATTGGCCGGGCGCGGATTGAAAC,GCATCGCCCGGCCAATTGGCCGGGCGCGGATTGAAAC	37,37,37	0	0	NA	NA	I-C:I-C:I-C	37,37,37	37	TypeI-C,TypeI-U?,TypeI-U	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|559aa|up_8|NZ_CP020370.1_4618053_4619730_-,NA|572aa|up_5|NZ_CP020370.1_4621701_4623417_-,NA|112aa|up_4|NZ_CP020370.1_4623508_4623844_+,NA	cas8c|331aa|up_9|NZ_CP020370.1_4617172_4618165_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	NA|559aa|up_8|NZ_CP020370.1_4618053_4619730_-	NA	cas8c|320aa|up_7|NZ_CP020370.1_4619929_4620889_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7b|279aa|up_6|NZ_CP020370.1_4620885_4621722_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	NA|572aa|up_5|NZ_CP020370.1_4621701_4623417_-	NA	NA|112aa|up_4|NZ_CP020370.1_4623508_4623844_+	NA	cas4|220aa|up_3|NZ_CP020370.1_4623934_4624594_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	NA|98aa|up_2|NZ_CP020370.1_4624705_4624999_+	pfam04255, DUF433, Protein of unknown function (DUF433)	cas1|345aa|up_1|NZ_CP020370.1_4624998_4626033_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NZ_CP020370.1_4626049_4626340_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|1062aa|down_0|NZ_CP020370.1_4629320_4632506_-	COG3264, COG3264, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|287aa|down_1|NZ_CP020370.1_4632502_4633363_-	cd13703, PBP2_HisJ_LAO, Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold	NA|446aa|down_2|NZ_CP020370.1_4633412_4634750_-	cd14750, PBP2_TMBP, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose; possesses type 2 periplasmic binding fold	NA|375aa|down_3|NZ_CP020370.1_4635011_4636136_-	TIGR04407, LptF_YjgP, LPS export ABC transporter permease LptF	NA|88aa|down_4|NZ_CP020370.1_4636736_4637000_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|413aa|down_5|NZ_CP020370.1_4636989_4638228_+	pfam13191, AAA_16, AAA ATPase domain	NA|271aa|down_6|NZ_CP020370.1_4638227_4639040_+	sd00006, TPR, Tetratricopeptide repeat	NA|222aa|down_7|NZ_CP020370.1_4639673_4640339_+	COG4245, TerY, Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain [General function prediction only]	NA|752aa|down_8|NZ_CP020370.1_4640369_4642625_+	COG4248, COG4248, Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]	NA|313aa|down_9|NZ_CP020370.1_4642810_4643749_+	COG1262, COG1262, Uncharacterized conserved protein [Function unknown]
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	15	5078034-5085199	5,14,4,6	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no		csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Orphan	GTTTCCGCGGCGAATTCGCCGCGGCCTCATTGAAGC,GTTTCCGCGGCGAATTCGCCGCGGCCTCATTGAAGC,GTTTCCGCGGCGAATTCGCCGCGGCCTCATTGAAGC,GTTTCCGCGGCGAATTCGCCGCGGCCTCATTGAAGC	36,36,36,36	0	0	NA	NA	NA:NA:NA:NA	95,98,98,95	98	Orphan	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|147aa|up_9|NZ_CP020370.1_5065334_5065775_+,NA|131aa|down_3|NZ_CP020370.1_5087253_5087646_+,NA|116aa|down_4|NZ_CP020370.1_5087652_5088000_+,NA|79aa|down_5|NZ_CP020370.1_5088081_5088318_+	NA|147aa|up_9|NZ_CP020370.1_5065334_5065775_+	NA	NA|197aa|up_8|NZ_CP020370.1_5065973_5066564_+	cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)	NA|437aa|up_7|NZ_CP020370.1_5066761_5068072_+	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|700aa|up_6|NZ_CP020370.1_5069106_5071206_+	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|224aa|up_5|NZ_CP020370.1_5071354_5072026_+	pfam07751, Abi_2, Abi-like protein	NA|443aa|up_4|NZ_CP020370.1_5072096_5073425_+	cd17246, RMtype1_S_SonII-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Shewanella oneidensis MR-1 S subunit (S	NA|137aa|up_3|NZ_CP020370.1_5073421_5073832_+	pfam13784, Fic_N, Fic/DOC family N-terminal	NA|530aa|up_2|NZ_CP020370.1_5074104_5075694_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|56aa|up_1|NZ_CP020370.1_5075838_5076006_+	pfam02661, Fic, Fic/DOC family	NA|529aa|up_0|NZ_CP020370.1_5076229_5077816_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|162aa|down_0|NZ_CP020370.1_5085279_5085765_-	pfam05069, Phage_tail_S, Phage virion morphogenesis family	NA|296aa|down_1|NZ_CP020370.1_5085853_5086741_-	pfam18810, PBECR2, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2	NA|138aa|down_2|NZ_CP020370.1_5086782_5087196_+	TIGR01641, Uncharacterized_protein_MJ0329, phage putative head morphogenesis protein, SPP1 gp7 family	NA|131aa|down_3|NZ_CP020370.1_5087253_5087646_+	NA	NA|116aa|down_4|NZ_CP020370.1_5087652_5088000_+	NA	NA|79aa|down_5|NZ_CP020370.1_5088081_5088318_+	NA	NA|197aa|down_6|NZ_CP020370.1_5089168_5089759_-	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like	NA|1546aa|down_7|NZ_CP020370.1_5089936_5094574_-	PRK09751, PRK09751, putative ATP-dependent helicase Lhr; Provisional	NA|502aa|down_8|NZ_CP020370.1_5096396_5097902_+	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]	NA|1553aa|down_9|NZ_CP020370.1_5098273_5102932_-	PRK13557, PRK13557, histidine kinase; Provisional
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	16	5285090-5285168	15	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Orphan	TGGCTGAAAGAAGTACGGTAGTACGT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|430aa|up_8|NZ_CP020370.1_5274622_5275912_-,NA|174aa|up_7|NZ_CP020370.1_5276298_5276820_-,NA|308aa|down_4|NZ_CP020370.1_5289059_5289983_-,NA|392aa|down_5|NZ_CP020370.1_5289979_5291155_-	NA|1036aa|up_9|NZ_CP020370.1_5271512_5274620_-	sd00006, TPR, Tetratricopeptide repeat	NA|430aa|up_8|NZ_CP020370.1_5274622_5275912_-	NA	NA|174aa|up_7|NZ_CP020370.1_5276298_5276820_-	NA	NA|193aa|up_6|NZ_CP020370.1_5276925_5277504_-	smart00775, LNS2, This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins	NA|286aa|up_5|NZ_CP020370.1_5277822_5278680_+	PRK09430, djlA, co-chaperone DjlA	NA|231aa|up_4|NZ_CP020370.1_5278777_5279470_+	PRK05581, PRK05581, ribulose-phosphate 3-epimerase; Validated	NA|226aa|up_3|NZ_CP020370.1_5279645_5280323_+	cd16417, HAD_PGPase, Escherichia coli Gph phosphoglycolate phosphatase and related proteins; belongs to the haloacid dehalogenase-like superfamily	NA|497aa|up_2|NZ_CP020370.1_5280619_5282110_+	PRK13565, PRK13565, anthranilate synthase component I; Provisional	NA|240aa|up_1|NZ_CP020370.1_5282316_5283036_+	pfam07589, VPEP, PEP-CTERM motif	NA|269aa|up_0|NZ_CP020370.1_5283240_5284047_-	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|175aa|down_0|NZ_CP020370.1_5285241_5285766_+	PRK00039, ruvC, Holliday junction resolvase; Reviewed	NA|210aa|down_1|NZ_CP020370.1_5285762_5286392_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|195aa|down_2|NZ_CP020370.1_5286536_5287121_-	cd06260, DUF820, Domain of unknown function (DUF820)	NA|496aa|down_3|NZ_CP020370.1_5287378_5288866_-	pfam16208, Keratin_2_head, Keratin type II head	NA|308aa|down_4|NZ_CP020370.1_5289059_5289983_-	NA	NA|392aa|down_5|NZ_CP020370.1_5289979_5291155_-	NA	NA|74aa|down_6|NZ_CP020370.1_5291742_5291964_+	pfam09720, Unstab_antitox, Putative addiction module component	NA|102aa|down_7|NZ_CP020370.1_5291960_5292266_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|869aa|down_8|NZ_CP020370.1_5292549_5295156_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|231aa|down_9|NZ_CP020370.1_5295492_5296185_+	pfam07589, VPEP, PEP-CTERM motif
GCF_002813775.1_ASM281377v1	NZ_CP020370	Candidatus Thiodictyon syntrophicum strain Cad16T chromosome, complete genome	17	5790368-5790476	16	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4	Orphan	CCCTACTACCCGGTTTCAGCTTATCTTGCGTATCG	35	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|324aa|up_5|NZ_CP020370.1_5782000_5782972_-,NA|81aa|up_2|NZ_CP020370.1_5785486_5785729_-,NA|70aa|up_1|NZ_CP020370.1_5786688_5786898_-,NA	NA|159aa|up_9|NZ_CP020370.1_5776243_5776720_+	PRK05422, smpB, SsrA-binding protein SmpB	NA|224aa|up_8|NZ_CP020370.1_5778025_5778697_+	pfam18203, IPTL-CTERM, IPTL-CTERM motif	NA|684aa|up_7|NZ_CP020370.1_5778714_5780766_-	PRK01862, PRK01862, voltage-gated chloride channel ClcB	NA|405aa|up_6|NZ_CP020370.1_5780765_5781980_-	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters	NA|324aa|up_5|NZ_CP020370.1_5782000_5782972_-	NA	NA|391aa|up_4|NZ_CP020370.1_5783021_5784194_-	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase	NA|297aa|up_3|NZ_CP020370.1_5784603_5785494_-	TIGR04060, formate_focA, formate transporter FocA	NA|81aa|up_2|NZ_CP020370.1_5785486_5785729_-	NA	NA|70aa|up_1|NZ_CP020370.1_5786688_5786898_-	NA	NA|1063aa|up_0|NZ_CP020370.1_5787104_5790293_-	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	NA|258aa|down_0|NZ_CP020370.1_5790892_5791666_-	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|1592aa|down_1|NZ_CP020370.1_5791796_5796572_-	pfam13229, Beta_helix, Right handed beta helix region	NA|97aa|down_2|NZ_CP020370.1_5796811_5797102_+	pfam08681, DUF1778, Protein of unknown function (DUF1778)	NA|118aa|down_3|NZ_CP020370.1_5797086_5797440_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|153aa|down_4|NZ_CP020370.1_5797855_5798314_-	COG5433, COG5433, Transposase [DNA replication, recombination, and repair]	NA|70aa|down_5|NZ_CP020370.1_5799669_5799879_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|544aa|down_6|NZ_CP020370.1_5800394_5802026_-	TIGR01817, Nif-specific_regulatory_protein, Nif-specific regulatory protein	NA|550aa|down_7|NZ_CP020370.1_5802030_5803680_-	TIGR02938, Nitrogen_fixation_regulatory_protein, nitrogen fixation negative regulator NifL	NA|182aa|down_8|NZ_CP020370.1_5804107_5804653_+	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional	NA|496aa|down_9|NZ_CP020370.1_5804668_5806156_+	TIGR01945, Electron_transport_complex_subunit_C, electron transport complex, RnfABCDGE type, C subunit
GCF_002813775.1_ASM281377v1	NZ_CP020372	Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs485, complete sequence	1	391741-393104	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas10,csm3gr7,cas1,cas2	WYL,cas10,csm3gr7,cas1,cas2	Type III-D,Type III-C,Type III-B,Type III-A	GTAGCGCTACTCCGAGCCGCAAAGGCTATTGAAAC,GTAGCGCTACTCCGAGCCGCAAAGGCTATTGAAAC,GTAGCGCTACTCCGAGCCGCAAAGGCTATTGAAAC	35,35,35	0	0	NA	NA	NA:NA:NA	19,19,19	19	TypeIII-D,TypeIII-C,TypeIII-B,TypeIII-A	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|183aa|up_4|NZ_CP020372.1_382705_383254_+,NA|639aa|up_2|NZ_CP020372.1_385891_387808_+,NA	NA|256aa|up_9|NZ_CP020372.1_373892_374660_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|569aa|up_8|NZ_CP020372.1_375058_376765_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	cas10|615aa|up_7|NZ_CP020372.1_377030_378875_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	NA|766aa|up_6|NZ_CP020372.1_378867_381165_+	pfam03787, RAMPs, RAMP superfamily	csm3gr7|516aa|up_5|NZ_CP020372.1_381161_382709_+	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	NA|183aa|up_4|NZ_CP020372.1_382705_383254_+	NA	csm3gr7|859aa|up_3|NZ_CP020372.1_383250_385827_+	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	NA|639aa|up_2|NZ_CP020372.1_385891_387808_+	NA	cas1|1053aa|up_1|NZ_CP020372.1_387821_390980_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|94aa|up_0|NZ_CP020372.1_390982_391264_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|86aa|down_0|NZ_CP020372.1_393570_393828_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|456aa|down_1|NZ_CP020372.1_395404_396772_-	pfam14067, LssY_C, LssY C-terminus	NA|233aa|down_2|NZ_CP020372.1_397283_397982_+	COG0860, AmiC, N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|195aa|down_3|NZ_CP020372.1_398002_398587_+	pfam10646, Germane, Sporulation and spore germination	NA|319aa|down_4|NZ_CP020372.1_398771_399728_+	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|91aa|down_5|NZ_CP020372.1_399800_400073_+	cd07400, MPP_1, Uncharacterized subfamily, metallophosphatase domain	NA|1100aa|down_6|NZ_CP020372.1_400127_403427_+	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|85aa|down_7|NZ_CP020372.1_403930_404185_-	pfam03683, UPF0175, Uncharacterized protein family (UPF0175)	NA|92aa|down_8|NZ_CP020372.1_404385_404661_-	pfam07704, PSK_trans_fac, Rv0623-like transcription factor	NA|386aa|down_9|NZ_CP020372.1_405521_406679_-	pfam04986, Y2_Tnp, Putative transposase
GCF_002813775.1_ASM281377v1	NZ_CP020371	Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence	1	16679-16790	1	CRISPRCasFinder	no	c2c9_V-U4	c2c9_V-U4,PD-DExK,WYL,RT,cas3	Type V-U4	GTTGACCTGACCACCGATGTCTTGGGGCGGCCGGTGC	37	0	0	NA	NA	NA	1	1	TypeV-U4	csa3,DEDDh,PD-DExK,WYL,cas3,cas2,cas1,csb2gr5,cas7,cas8u2,DinG,RT,cas6,c2c9_V-U4,cas5,cas10,cas8c,cas7b,cas4,csm3gr7	NA|335aa|up_9|NZ_CP020371.1_6121_7126_-,NA|50aa|up_4|NZ_CP020371.1_13971_14121_-,NA|168aa|up_1|NZ_CP020371.1_15522_16026_-,NA|114aa|down_0|NZ_CP020371.1_17959_18301_+,NA|72aa|down_1|NZ_CP020371.1_18558_18774_+,NA|48aa|down_4|NZ_CP020371.1_20663_20807_-,NA|77aa|down_5|NZ_CP020371.1_20839_21070_+	NA|335aa|up_9|NZ_CP020371.1_6121_7126_-	NA	NA|521aa|up_8|NZ_CP020371.1_7440_9003_-	smart00854, PGA_cap, Bacterial capsule synthesis protein PGA_cap	NA|935aa|up_7|NZ_CP020371.1_8999_11804_-	pfam11369, DUF3160, Protein of unknown function (DUF3160)	NA|382aa|up_6|NZ_CP020371.1_11833_12979_-	COG4461, LprI, Uncharacterized protein conserved in bacteria, putative lipoprotein [Function unknown]	NA|197aa|up_5|NZ_CP020371.1_13075_13666_-	pfam04446, Thg1, tRNAHis guanylyltransferase	NA|50aa|up_4|NZ_CP020371.1_13971_14121_-	NA	NA|145aa|up_3|NZ_CP020371.1_14216_14651_+	COG1238, COG1238, Predicted membrane protein [Function unknown]	NA|170aa|up_2|NZ_CP020371.1_15001_15511_-	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only]	NA|168aa|up_1|NZ_CP020371.1_15522_16026_-	NA	NA|85aa|up_0|NZ_CP020371.1_16025_16280_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|114aa|down_0|NZ_CP020371.1_17959_18301_+	NA	NA|72aa|down_1|NZ_CP020371.1_18558_18774_+	NA	NA|243aa|down_2|NZ_CP020371.1_18920_19649_-	cd03080, GST_N_Metaxin_like, GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs	NA|296aa|down_3|NZ_CP020371.1_19763_20651_-	pfam10112, Halogen_Hydrol, 5-bromo-4-chloroindolyl phosphate hydrolysis protein	NA|48aa|down_4|NZ_CP020371.1_20663_20807_-	NA	NA|77aa|down_5|NZ_CP020371.1_20839_21070_+	NA	NA|224aa|down_6|NZ_CP020371.1_21150_21822_-	TIGR04282, hypothetical_protein, transferase 1, rSAM/selenodomain-associated	NA|322aa|down_7|NZ_CP020371.1_21825_22791_-	TIGR04167, radical_SAM_domain_protein, radical SAM/Cys-rich domain protein	NA|302aa|down_8|NZ_CP020371.1_22832_23738_-	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|223aa|down_9|NZ_CP020371.1_23734_24403_-	TIGR04283, glycosyl_transferase_family_2, transferase 2, rSAM/selenodomain-associated
