assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002812665.1_ASM281266v1	NZ_CP025040	Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_3, complete sequence	1	79443-79611	1	PILER-CR	no			Orphan	ATAATTAAATCATGATTTAATG	22	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,DEDDh,DinG,RT,WYL	NA|93aa|up_4|NZ_CP025040.1_75840_76119_+,NA|89aa|up_1|NZ_CP025040.1_78118_78385_-,NA|76aa|down_1|NZ_CP025040.1_80293_80521_+,NA|77aa|down_5|NZ_CP025040.1_82876_83107_+	NA|133aa|up_9|NZ_CP025040.1_69165_69564_+	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|279aa|up_8|NZ_CP025040.1_69629_70466_+	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase	NA|212aa|up_7|NZ_CP025040.1_70493_71129_-	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme	NA|1013aa|up_6|NZ_CP025040.1_71296_74335_+	pfam01526, DDE_Tnp_Tn3, Tn3 transposase DDE domain	NA|341aa|up_5|NZ_CP025040.1_74358_75381_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|93aa|up_4|NZ_CP025040.1_75840_76119_+	NA	NA|204aa|up_3|NZ_CP025040.1_76436_77048_+	pfam11140, DUF2913, Protein of unknown function (DUF2913)	NA|318aa|up_2|NZ_CP025040.1_77044_77998_-	COG5464, COG5464, Uncharacterized conserved protein [Function unknown]	NA|89aa|up_1|NZ_CP025040.1_78118_78385_-	NA	NA|207aa|up_0|NZ_CP025040.1_78404_79025_-	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme	NA|209aa|down_0|NZ_CP025040.1_79622_80249_+	cd02042, ParAB_family, partition proteins ParAB family	NA|76aa|down_1|NZ_CP025040.1_80293_80521_+	NA	NA|425aa|down_2|NZ_CP025040.1_80695_81970_-	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC	NA|150aa|down_3|NZ_CP025040.1_81981_82431_-	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit	NA|82aa|down_4|NZ_CP025040.1_82427_82673_-	pfam06183, DinI, DinI-like family	NA|77aa|down_5|NZ_CP025040.1_82876_83107_+	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
GCF_002812665.1_ASM281266v1	NZ_CP025037	Klebsiella pneumoniae strain NU-CRE047 chromosome, complete genome	1	4205380-4205475	1	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,RT,WYL	Orphan	TGGCACTTTGTTGGCATTCTGTTGGCACAA	30	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,RT,WYL	NA|46aa|up_9|NZ_CP025037.1_4199096_4199234_-,NA|59aa|up_4|NZ_CP025037.1_4201628_4201805_-,NA|169aa|up_2|NZ_CP025037.1_4202753_4203260_-,NA|49aa|down_0|NZ_CP025037.1_4205861_4206008_-,NA|72aa|down_4|NZ_CP025037.1_4207756_4207972_+,NA|37aa|down_5|NZ_CP025037.1_4207968_4208079_+,NA|65aa|down_6|NZ_CP025037.1_4208071_4208266_+,NA|95aa|down_7|NZ_CP025037.1_4208354_4208639_+	NA|46aa|up_9|NZ_CP025037.1_4199096_4199234_-	NA	NA|212aa|up_8|NZ_CP025037.1_4199230_4199866_-	pfam05766, NinG, Bacteriophage Lambda NinG protein	NA|57aa|up_7|NZ_CP025037.1_4199858_4200029_-	PRK09689, PRK09689, prophage protein NinE; Provisional	NA|152aa|up_6|NZ_CP025037.1_4200028_4200484_-	PRK09741, PRK09741, hypothetical protein; Provisional	NA|216aa|up_5|NZ_CP025037.1_4200984_4201632_-	pfam04448, DUF551, Protein of unknown function (DUF551)	NA|59aa|up_4|NZ_CP025037.1_4201628_4201805_-	NA	NA|281aa|up_3|NZ_CP025037.1_4201804_4202647_-	pfam13935, Ead_Ea22, Ead/Ea22-like protein	NA|169aa|up_2|NZ_CP025037.1_4202753_4203260_-	NA	NA|98aa|up_1|NZ_CP025037.1_4203256_4203550_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|472aa|up_0|NZ_CP025037.1_4203549_4204965_-	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily	NA|49aa|down_0|NZ_CP025037.1_4205861_4206008_-	NA	NA|74aa|down_1|NZ_CP025037.1_4206093_4206315_-	pfam05269, Phage_CII, Bacteriophage CII protein	NA|78aa|down_2|NZ_CP025037.1_4206355_4206589_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|230aa|down_3|NZ_CP025037.1_4206716_4207406_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|72aa|down_4|NZ_CP025037.1_4207756_4207972_+	NA	NA|37aa|down_5|NZ_CP025037.1_4207968_4208079_+	NA	NA|65aa|down_6|NZ_CP025037.1_4208071_4208266_+	NA	NA|95aa|down_7|NZ_CP025037.1_4208354_4208639_+	NA	NA|282aa|down_8|NZ_CP025037.1_4208654_4209500_+	TIGR01913, Uncharacterized_protein_UU154, phage recombination protein Bet	NA|227aa|down_9|NZ_CP025037.1_4209496_4210177_+	pfam09588, YqaJ, YqaJ-like viral recombinase domain
GCF_002812665.1_ASM281266v1	NZ_CP025037	Klebsiella pneumoniae strain NU-CRE047 chromosome, complete genome	2	4689349-4689443	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,DinG,RT,WYL	Orphan	ACTATGGTTTTTATGGTTTTTATT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,RT,WYL	NA|57aa|up_8|NZ_CP025037.1_4676395_4676566_+,NA	NA|282aa|up_9|NZ_CP025037.1_4675564_4676410_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|57aa|up_8|NZ_CP025037.1_4676395_4676566_+	NA	NA|570aa|up_7|NZ_CP025037.1_4676747_4678457_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_6|NZ_CP025037.1_4678467_4679970_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|up_5|NZ_CP025037.1_4680107_4680803_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|786aa|up_4|NZ_CP025037.1_4680978_4683336_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|up_3|NZ_CP025037.1_4683523_4686430_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|up_2|NZ_CP025037.1_4686442_4687102_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|180aa|up_1|NZ_CP025037.1_4687176_4687716_-	TIGR03124, citrate_citX, holo-ACP synthase CitX	NA|455aa|up_0|NZ_CP025037.1_4687895_4689260_-	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family	NA|542aa|down_0|NZ_CP025037.1_4689584_4691210_+	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|233aa|down_1|NZ_CP025037.1_4691199_4691898_+	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|276aa|down_2|NZ_CP025037.1_4691930_4692758_-	PRK09430, djlA, co-chaperone DjlA	NA|783aa|down_3|NZ_CP025037.1_4693001_4695350_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_4|NZ_CP025037.1_4695404_4696691_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_5|NZ_CP025037.1_4696696_4697686_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_6|NZ_CP025037.1_4697682_4698504_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|126aa|down_7|NZ_CP025037.1_4698506_4698884_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|283aa|down_8|NZ_CP025037.1_4698888_4699737_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|down_9|NZ_CP025037.1_4699992_4700472_-	PRK10769, folA, type 3 dihydrofolate reductase
GCF_002812665.1_ASM281266v1	NZ_CP025041	Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_4, complete sequence	1	35013-35112	1	CRISPRCasFinder	no			Orphan	TTAAAATCTTCTCACCTTACGTGAAAAATCCTCTCA	36	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,DinG,RT,WYL	NA|79aa|up_9|NZ_CP025041.1_21471_21708_+,NA|184aa|up_8|NZ_CP025041.1_21767_22319_+,NA|71aa|up_7|NZ_CP025041.1_22384_22597_+,NA|113aa|up_5|NZ_CP025041.1_22922_23261_+,NA|55aa|up_4|NZ_CP025041.1_23335_23500_+,NA|86aa|up_3|NZ_CP025041.1_23496_23754_+,NA|63aa|up_2|NZ_CP025041.1_25484_25673_-,NA|199aa|up_1|NZ_CP025041.1_25728_26325_+,NA|79aa|up_0|NZ_CP025041.1_28292_28529_+,NA|63aa|down_1|NZ_CP025041.1_40867_41056_-,NA|79aa|down_4|NZ_CP025041.1_43681_43918_+,NA|89aa|down_8|NZ_CP025041.1_47197_47464_+	NA|79aa|up_9|NZ_CP025041.1_21471_21708_+	NA	NA|184aa|up_8|NZ_CP025041.1_21767_22319_+	NA	NA|71aa|up_7|NZ_CP025041.1_22384_22597_+	NA	NA|81aa|up_6|NZ_CP025041.1_22586_22829_+	TIGR03830, transcriptional_regulator_XRE_family, putative zinc finger/helix-turn-helix protein, YgiT family	NA|113aa|up_5|NZ_CP025041.1_22922_23261_+	NA	NA|55aa|up_4|NZ_CP025041.1_23335_23500_+	NA	NA|86aa|up_3|NZ_CP025041.1_23496_23754_+	NA	NA|63aa|up_2|NZ_CP025041.1_25484_25673_-	NA	NA|199aa|up_1|NZ_CP025041.1_25728_26325_+	NA	NA|79aa|up_0|NZ_CP025041.1_28292_28529_+	NA	NA|78aa|down_0|NZ_CP025041.1_37978_38212_+	TIGR03830, transcriptional_regulator_XRE_family, putative zinc finger/helix-turn-helix protein, YgiT family	NA|63aa|down_1|NZ_CP025041.1_40867_41056_-	NA	NA|387aa|down_2|NZ_CP025041.1_41708_42869_+	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|170aa|down_3|NZ_CP025041.1_43221_43731_+	cd09894, NGN_SP_AnfA1, N-Utilization Substance G (NusG) N-terminal domain in the NusG Specialized Paralog (SP), AnFA1	NA|79aa|down_4|NZ_CP025041.1_43681_43918_+	NA	NA|215aa|down_5|NZ_CP025041.1_43963_44608_+	cd16892, LT_VirB1-like, VirB1-like subfamily	NA|97aa|down_6|NZ_CP025041.1_44591_44882_+	pfam04956, TrbC, TrbC/VIRB2 family	NA|327aa|down_7|NZ_CP025041.1_46172_47153_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|89aa|down_8|NZ_CP025041.1_47197_47464_+	NA	NA|352aa|down_9|NZ_CP025041.1_47475_48531_+	pfam04610, TrbL, TrbL/VirB6 plasmid conjugal transfer protein
